Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309550 | KEH37197.1 | 83.099 | 71 | 8 | 1 | 1 | 67 | 1 | 71 | 2.20e-31 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0309550 | 0.801154 | 1.029250e-48 | -8.615850e-47 |
| Msa0011720 | Msa0309550 | 0.804282 | 2.327772e-49 | -8.615850e-47 |
| Msa0012040 | Msa0309550 | 0.816346 | 5.797476e-52 | -8.615850e-47 |
| Msa0014800 | Msa0309550 | 0.815142 | 1.075822e-51 | -8.615850e-47 |
| Msa0026490 | Msa0309550 | 0.822758 | 1.995292e-53 | -8.615850e-47 |
| Msa0044710 | Msa0309550 | 0.816586 | 5.124817e-52 | -8.615850e-47 |
| Msa0050730 | Msa0309550 | 0.808766 | 2.635448e-50 | -8.615850e-47 |
| Msa0050760 | Msa0309550 | 0.826052 | 3.352559e-54 | -8.615850e-47 |
| Msa0063350 | Msa0309550 | -0.815045 | 1.130179e-51 | -8.615850e-47 |
| Msa0071240 | Msa0309550 | 0.835368 | 1.747873e-56 | -8.615850e-47 |
| Msa0071550 | Msa0309550 | 0.802631 | 5.119489e-49 | -8.615850e-47 |
| Msa0071910 | Msa0309550 | -0.830467 | 2.889139e-55 | -8.615850e-47 |
| Msa0092990 | Msa0309550 | 0.834923 | 2.262774e-56 | -8.615850e-47 |
| Msa0096450 | Msa0309550 | 0.805801 | 1.120291e-49 | -8.615850e-47 |
| Msa0101710 | Msa0309550 | 0.811055 | 8.479005e-51 | -8.615850e-47 |
| Msa0105700 | Msa0309550 | 0.819869 | 9.260417e-53 | -8.615850e-47 |
| Msa0119850 | Msa0309550 | 0.815369 | 9.577484e-52 | -8.615850e-47 |
| Msa0133130 | Msa0309550 | 0.802001 | 6.901584e-49 | -8.615850e-47 |
| Msa0145310 | Msa0309550 | 0.844221 | 8.644242e-59 | -8.615850e-47 |
| Msa0145410 | Msa0309550 | 0.821356 | 4.216524e-53 | -8.615850e-47 |
| Msa0147920 | Msa0309550 | 0.808583 | 2.884467e-50 | -8.615850e-47 |
| Msa0152170 | Msa0309550 | 0.821016 | 5.051002e-53 | -8.615850e-47 |
| Msa0157100 | Msa0309550 | 0.816230 | 6.154695e-52 | -8.615850e-47 |
| Msa0173990 | Msa0309550 | 0.803994 | 2.672476e-49 | -8.615850e-47 |
| Msa0178860 | Msa0309550 | -0.838230 | 3.254322e-57 | -8.615850e-47 |
| Msa0185640 | Msa0309550 | -0.827047 | 1.940875e-54 | -8.615850e-47 |
| Msa0188680 | Msa0309550 | -0.836089 | 1.147857e-56 | -8.615850e-47 |
| Msa0191910 | Msa0309550 | 0.804300 | 2.308200e-49 | -8.615850e-47 |
| Msa0199800 | Msa0309550 | -0.804570 | 2.027985e-49 | -8.615850e-47 |
| Msa0200370 | Msa0309550 | 0.846430 | 2.183402e-59 | -8.615850e-47 |
| Msa0220440 | Msa0309550 | 0.804869 | 1.756308e-49 | -8.615850e-47 |
| Msa0258670 | Msa0309550 | -0.807388 | 5.180781e-50 | -8.615850e-47 |
| Msa0266210 | Msa0309550 | 0.800913 | 1.153082e-48 | -8.615850e-47 |
| Msa0267310 | Msa0309550 | 0.824311 | 8.647963e-54 | -8.615850e-47 |
| Msa0269450 | Msa0309550 | 0.843634 | 1.241776e-58 | -8.615850e-47 |
| Msa0270220 | Msa0309550 | -0.835978 | 1.224913e-56 | -8.615850e-47 |
| Msa0281260 | Msa0309550 | 0.833293 | 5.794997e-56 | -8.615850e-47 |
| Msa0281270 | Msa0309550 | 0.864811 | 9.297311e-65 | -8.615850e-47 |
| Msa0282170 | Msa0309550 | 0.807300 | 5.407396e-50 | -8.615850e-47 |
| Msa0282250 | Msa0309550 | 0.803543 | 3.315144e-49 | -8.615850e-47 |
| Msa0296160 | Msa0309550 | 0.803233 | 3.844531e-49 | -8.615850e-47 |
| Msa0306210 | Msa0309550 | -0.824987 | 5.992224e-54 | -8.615850e-47 |
| Msa0307830 | Msa0309550 | -0.846951 | 1.573059e-59 | -8.615850e-47 |
| Msa0309550 | Msa0309560 | 0.820678 | 6.042704e-53 | -8.615850e-47 |
| Msa0309550 | Msa0315290 | 0.829190 | 5.912040e-55 | -8.615850e-47 |
| Msa0309550 | Msa0319170 | 0.803540 | 3.319902e-49 | -8.615850e-47 |
| Msa0309550 | Msa0320440 | 0.841353 | 5.001820e-58 | -8.615850e-47 |
| Msa0309550 | Msa0323080 | 0.800046 | 1.731522e-48 | -8.615850e-47 |
| Msa0309550 | Msa0326670 | 0.815709 | 8.046962e-52 | -8.615850e-47 |
| Msa0309550 | Msa0334570 | 0.806199 | 9.237438e-50 | -8.615850e-47 |
| Msa0309550 | Msa0342340 | -0.827606 | 1.426119e-54 | -8.615850e-47 |
| Msa0309550 | Msa0344830 | 0.827902 | 1.210542e-54 | -8.615850e-47 |
| Msa0309550 | Msa0344910 | 0.813728 | 2.209537e-51 | -8.615850e-47 |
| Msa0309550 | Msa0344980 | 0.814504 | 1.489786e-51 | -8.615850e-47 |
| Msa0309550 | Msa0351810 | 0.803932 | 2.753541e-49 | -8.615850e-47 |
| Msa0309550 | Msa0358170 | 0.806577 | 7.687811e-50 | -8.615850e-47 |
| Msa0309550 | Msa0365490 | 0.801988 | 6.942806e-49 | -8.615850e-47 |
| Msa0309550 | Msa0371420 | -0.805899 | 1.068416e-49 | -8.615850e-47 |
| Msa0309550 | Msa0379640 | 0.819962 | 8.817685e-53 | -8.615850e-47 |
| Msa0309550 | Msa0380040 | 0.806492 | 8.014370e-50 | -8.615850e-47 |
| Msa0309550 | Msa0388840 | 0.819104 | 1.383559e-52 | -8.615850e-47 |
| Msa0309550 | Msa0389360 | 0.800870 | 1.176756e-48 | -8.615850e-47 |
| Msa0309550 | Msa0389810 | 0.873758 | 1.147491e-67 | -8.615850e-47 |
| Msa0309550 | Msa0394340 | 0.810489 | 1.123664e-50 | -8.615850e-47 |
| Msa0309550 | Msa0399340 | 0.815766 | 7.814456e-52 | -8.615850e-47 |
| Msa0309550 | Msa0412840 | 0.825444 | 4.671039e-54 | -8.615850e-47 |
| Msa0309550 | Msa0419620 | -0.839828 | 1.254209e-57 | -8.615850e-47 |
| Msa0309550 | Msa0429290 | 0.802006 | 6.885089e-49 | -8.615850e-47 |
| Msa0309550 | Msa0431670 | 0.811601 | 6.452324e-51 | -8.615850e-47 |
| Msa0309550 | Msa0431690 | 0.808436 | 3.100314e-50 | -8.615850e-47 |
| Msa0309550 | Msa0442200 | 0.836633 | 8.344737e-57 | -8.615850e-47 |
| Msa0309550 | Msa0442850 | 0.819239 | 1.289208e-52 | -8.615850e-47 |
| Msa0309550 | Msa0444090 | 0.806156 | 9.432940e-50 | -8.615850e-47 |
| Msa0309550 | Msa0449830 | 0.807990 | 3.858996e-50 | -8.615850e-47 |
| Msa0309550 | Msa0458440 | 0.808330 | 3.265372e-50 | -8.615850e-47 |
| Msa0309550 | Msa0464900 | 0.821824 | 3.287980e-53 | -8.615850e-47 |
| Msa0309550 | Msa0465670 | -0.815185 | 1.052484e-51 | -8.615850e-47 |
| Msa0309550 | Msa0465680 | -0.836908 | 7.101196e-57 | -8.615850e-47 |
| Msa0309550 | Msa0466060 | 0.804518 | 2.078995e-49 | -8.615850e-47 |
| Msa0309550 | Msa0466390 | 0.811701 | 6.138157e-51 | -8.615850e-47 |
| Msa0309550 | Msa0467960 | -0.806424 | 8.282368e-50 | -8.615850e-47 |
| Msa0309550 | Msa0468130 | 0.871302 | 7.579138e-67 | -8.615850e-47 |
| Msa0309550 | Msa0475490 | 0.810393 | 1.178504e-50 | -8.615850e-47 |
| Msa0309550 | Msa0475580 | 0.806159 | 9.416585e-50 | -8.615850e-47 |
| Msa0309550 | Msa0477130 | -0.815680 | 8.163889e-52 | -8.615850e-47 |
| Msa0309550 | Msa0482190 | -0.829745 | 4.334705e-55 | -8.615850e-47 |
| Msa0309550 | Msa0484780 | 0.823662 | 1.227472e-53 | -8.615850e-47 |
| Msa0309550 | Msa0485500 | -0.824681 | 7.073429e-54 | -8.615850e-47 |
| Msa0309550 | Msa0489610 | 0.811445 | 6.975840e-51 | -8.615850e-47 |
| Msa0309550 | Msa0502100 | 0.832493 | 9.161025e-56 | -8.615850e-47 |
| Msa0309550 | Msa0511720 | -0.847861 | 8.847497e-60 | -8.615850e-47 |
| Msa0309550 | Msa0517330 | 0.808181 | 3.514277e-50 | -8.615850e-47 |
| Msa0309550 | Msa0519220 | 0.803812 | 2.916127e-49 | -8.615850e-47 |
| Msa0309550 | Msa0524890 | -0.812203 | 4.771096e-51 | -8.615850e-47 |
| Msa0309550 | Msa0536220 | 0.829591 | 4.725663e-55 | -8.615850e-47 |
| Msa0309550 | Msa0540070 | 0.837166 | 6.100550e-57 | -8.615850e-47 |
| Msa0309550 | Msa0543900 | 0.834267 | 3.308412e-56 | -8.615850e-47 |
| Msa0309550 | Msa0550430 | 0.812360 | 4.408933e-51 | -8.615850e-47 |
| Msa0309550 | Msa0553220 | -0.838278 | 3.161904e-57 | -8.615850e-47 |
| Msa0309550 | Msa0553460 | 0.828426 | 9.050877e-55 | -8.615850e-47 |
| Msa0309550 | Msa0558690 | 0.816172 | 6.341629e-52 | -8.615850e-47 |
| Msa0309550 | Msa0561130 | -0.832421 | 9.544607e-56 | -8.615850e-47 |
| Msa0309550 | Msa0561230 | 0.804986 | 1.659801e-49 | -8.615850e-47 |
| Msa0309550 | Msa0562440 | 0.806467 | 8.109615e-50 | -8.615850e-47 |
| Msa0309550 | Msa0564510 | 0.829735 | 4.359354e-55 | -8.615850e-47 |
| Msa0309550 | Msa0568240 | 0.801836 | 7.460843e-49 | -8.615850e-47 |
| Msa0309550 | Msa0568820 | 0.803320 | 3.688315e-49 | -8.615850e-47 |
| Msa0309550 | Msa0570330 | 0.820879 | 5.433019e-53 | -8.615850e-47 |
| Msa0309550 | Msa0575470 | 0.817323 | 3.500656e-52 | -8.615850e-47 |
| Msa0309550 | Msa0580420 | 0.837005 | 6.707428e-57 | -8.615850e-47 |
| Msa0309550 | Msa0585000 | -0.806562 | 7.745317e-50 | -8.615850e-47 |
| Msa0309550 | Msa0595850 | 0.808974 | 2.379647e-50 | -8.615850e-47 |
| Msa0309550 | Msa0599040 | 0.809574 | 1.769521e-50 | -8.615850e-47 |
| Msa0309550 | Msa0599580 | 0.811147 | 8.094972e-51 | -8.615850e-47 |
| Msa0309550 | Msa0599770 | 0.831144 | 1.971174e-55 | -8.615850e-47 |
| Msa0309550 | Msa0599890 | 0.809353 | 1.973404e-50 | -8.615850e-47 |
| Msa0309550 | Msa0607540 | 0.813782 | 2.150028e-51 | -8.615850e-47 |
| Msa0309550 | Msa0608710 | 0.816164 | 6.369445e-52 | -8.615850e-47 |
| Msa0309550 | Msa0610430 | 0.817666 | 2.929156e-52 | -8.615850e-47 |
| Msa0309550 | Msa0615310 | 0.801368 | 9.304619e-49 | -8.615850e-47 |
| Msa0309550 | Msa0631990 | 0.824380 | 8.329724e-54 | -8.615850e-47 |
| Msa0309550 | Msa0638280 | 0.821340 | 4.254400e-53 | -8.615850e-47 |
| Msa0309550 | Msa0638320 | 0.822782 | 1.970435e-53 | -8.615850e-47 |
| Msa0309550 | Msa0639820 | 0.810390 | 1.180530e-50 | -8.615850e-47 |
| Msa0309550 | Msa0640380 | 0.827478 | 1.530373e-54 | -8.615850e-47 |
| Msa0309550 | Msa0647450 | -0.858430 | 8.284805e-63 | -8.615850e-47 |
| Msa0309550 | Msa0647830 | 0.822897 | 1.852207e-53 | -8.615850e-47 |
| Msa0309550 | Msa0649130 | 0.811092 | 8.322296e-51 | -8.615850e-47 |
| Msa0309550 | Msa0654720 | 0.800858 | 1.183118e-48 | -8.615850e-47 |
| Msa0309550 | Msa0661190 | -0.810444 | 1.148935e-50 | -8.615850e-47 |
| Msa0309550 | Msa0662650 | 0.846304 | 2.362504e-59 | -8.615850e-47 |
| Msa0309550 | Msa0670660 | 0.818190 | 2.230137e-52 | -8.615850e-47 |
| Msa0309550 | Msa0673460 | 0.814127 | 1.804281e-51 | -8.615850e-47 |
| Msa0309550 | Msa0677270 | 0.811503 | 6.778032e-51 | -8.615850e-47 |
| Msa0309550 | Msa0678820 | 0.837805 | 4.185493e-57 | -8.615850e-47 |
| Msa0309550 | Msa0690440 | 0.837338 | 5.513238e-57 | -8.615850e-47 |
| Msa0309550 | Msa0692110 | 0.803216 | 3.875094e-49 | -8.615850e-47 |
| Msa0309550 | Msa0698360 | 0.800497 | 1.402022e-48 | -8.615850e-47 |
| Msa0309550 | Msa0708860 | 0.846270 | 2.414207e-59 | -8.615850e-47 |
| Msa0309550 | Msa0714340 | 0.829285 | 5.607783e-55 | -8.615850e-47 |
| Msa0309550 | Msa0714380 | 0.816449 | 5.499952e-52 | -8.615850e-47 |
| Msa0309550 | Msa0714600 | 0.814782 | 1.292801e-51 | -8.615850e-47 |
| Msa0309550 | Msa0722930 | 0.814778 | 1.295339e-51 | -8.615850e-47 |
| Msa0309550 | Msa0723140 | 0.800227 | 1.591165e-48 | -8.615850e-47 |
| Msa0309550 | Msa0724560 | 0.812452 | 4.209239e-51 | -8.615850e-47 |
| Msa0309550 | Msa0731180 | 0.833758 | 4.437717e-56 | -8.615850e-47 |
| Msa0309550 | Msa0743720 | 0.817890 | 2.607206e-52 | -8.615850e-47 |
| Msa0309550 | Msa0744170 | -0.815719 | 8.004855e-52 | -8.615850e-47 |
| Msa0309550 | Msa0756310 | 0.874980 | 4.417821e-68 | -8.615850e-47 |
| Msa0309550 | Msa0767080 | 0.815842 | 7.512489e-52 | -8.615850e-47 |
| Msa0309550 | Msa0771580 | 0.803783 | 2.956383e-49 | -8.615850e-47 |
| Msa0309550 | Msa0771720 | 0.840906 | 6.558683e-58 | -8.615850e-47 |
| Msa0309550 | Msa0790390 | -0.837294 | 5.658113e-57 | -8.615850e-47 |
| Msa0309550 | Msa0790660 | -0.813834 | 2.094453e-51 | -8.615850e-47 |
| Msa0309550 | Msa0795920 | 0.840077 | 1.080117e-57 | -8.615850e-47 |
| Msa0309550 | Msa0801360 | 0.809910 | 1.497973e-50 | -8.615850e-47 |
| Msa0309550 | Msa0824680 | 0.827978 | 1.160652e-54 | -8.615850e-47 |
| Msa0309550 | Msa0835730 | 0.885635 | 6.862066e-72 | -8.615850e-47 |
| Msa0309550 | Msa0835920 | 0.816410 | 5.610337e-52 | -8.615850e-47 |
| Msa0309550 | Msa0839830 | 0.805724 | 1.162861e-49 | -8.615850e-47 |
| Msa0309550 | Msa0844900 | 0.805034 | 1.622219e-49 | -8.615850e-47 |
| Msa0309550 | Msa0845000 | 0.810337 | 1.212135e-50 | -8.615850e-47 |
| Msa0309550 | Msa0846810 | 0.822831 | 1.918678e-53 | -8.615850e-47 |
| Msa0309550 | Msa0848900 | 0.805242 | 1.467457e-49 | -8.615850e-47 |
| Msa0309550 | Msa0864470 | -0.802611 | 5.168830e-49 | -8.615850e-47 |
| Msa0309550 | Msa0869120 | 0.826449 | 2.696896e-54 | -8.615850e-47 |
| Msa0309550 | Msa0876580 | 0.811225 | 7.786747e-51 | -8.615850e-47 |
| Msa0309550 | Msa0877410 | 0.812584 | 3.940081e-51 | -8.615850e-47 |
| Msa0309550 | Msa0899230 | 0.832183 | 1.093372e-55 | -8.615850e-47 |
| Msa0309550 | Msa0908170 | 0.819982 | 8.722803e-53 | -8.615850e-47 |
| Msa0309550 | Msa0910980 | -0.845945 | 2.958753e-59 | -8.615850e-47 |
| Msa0309550 | Msa0927670 | 0.849957 | 2.315832e-60 | -8.615850e-47 |
| Msa0309550 | Msa0933230 | 0.807582 | 4.711723e-50 | -8.615850e-47 |
| Msa0309550 | Msa0944550 | 0.837941 | 3.861777e-57 | -8.615850e-47 |
| Msa0309550 | Msa0944770 | 0.815958 | 7.079092e-52 | -8.615850e-47 |
| Msa0309550 | Msa0946690 | -0.800232 | 1.587647e-48 | -8.615850e-47 |
| Msa0309550 | Msa0947760 | 0.801497 | 8.757046e-49 | -8.615850e-47 |
| Msa0309550 | Msa0960160 | 0.821470 | 3.969338e-53 | -8.615850e-47 |
| Msa0309550 | Msa0961420 | -0.838478 | 2.808932e-57 | -8.615850e-47 |
| Msa0309550 | Msa0979100 | 0.818075 | 2.367810e-52 | -8.615850e-47 |
| Msa0309550 | Msa0982270 | 0.878522 | 2.624716e-69 | -8.615850e-47 |
| Msa0309550 | Msa0992490 | -0.847347 | 1.224983e-59 | -8.615850e-47 |
| Msa0309550 | Msa0999040 | 0.831451 | 1.657012e-55 | -8.615850e-47 |
| Msa0309550 | Msa1000020 | 0.812468 | 4.176884e-51 | -8.615850e-47 |
| Msa0309550 | Msa1002480 | 0.823882 | 1.090144e-53 | -8.615850e-47 |
| Msa0309550 | Msa1019840 | -0.824843 | 6.481375e-54 | -8.615850e-47 |
| Msa0309550 | Msa1031810 | 0.811816 | 5.793291e-51 | -8.615850e-47 |
| Msa0309550 | Msa1034710 | 0.807531 | 4.830927e-50 | -8.615850e-47 |
| Msa0309550 | Msa1037700 | -0.833653 | 4.712903e-56 | -8.615850e-47 |
| Msa0309550 | Msa1039880 | 0.829710 | 4.419352e-55 | -8.615850e-47 |
| Msa0309550 | Msa1043790 | 0.813492 | 2.490823e-51 | -8.615850e-47 |
| Msa0309550 | Msa1044420 | 0.801299 | 9.615086e-49 | -8.615850e-47 |
| Msa0309550 | Msa1054410 | 0.864573 | 1.103237e-64 | -8.615850e-47 |
| Msa0309550 | Msa1068200 | -0.804244 | 2.371270e-49 | -8.615850e-47 |
| Msa0309550 | Msa1070850 | 0.838892 | 2.195401e-57 | -8.615850e-47 |
| Msa0309550 | Msa1072460 | -0.820564 | 6.418037e-53 | -8.615850e-47 |
| Msa0309550 | Msa1073070 | -0.820569 | 6.400714e-53 | -8.615850e-47 |
| Msa0309550 | Msa1074530 | 0.806925 | 6.491792e-50 | -8.615850e-47 |
| Msa0309550 | Msa1075080 | -0.805483 | 1.306013e-49 | -8.615850e-47 |
| Msa0309550 | Msa1075220 | -0.808318 | 3.285243e-50 | -8.615850e-47 |
| Msa0309550 | Msa1079730 | -0.806832 | 6.790472e-50 | -8.615850e-47 |
| Msa0309550 | Msa1080790 | 0.807767 | 4.303467e-50 | -8.615850e-47 |
| Msa0309550 | Msa1082500 | 0.817678 | 2.910868e-52 | -8.615850e-47 |
| Msa0309550 | Msa1090260 | 0.819000 | 1.461425e-52 | -8.615850e-47 |
| Msa0309550 | Msa1092090 | 0.840347 | 9.185675e-58 | -8.615850e-47 |
| Msa0309550 | Msa1095480 | 0.820417 | 6.934465e-53 | -8.615850e-47 |
| Msa0309550 | Msa1100720 | 0.804336 | 2.268627e-49 | -8.615850e-47 |
| Msa0309550 | Msa1115020 | 0.806470 | 8.099385e-50 | -8.615850e-47 |
| Msa0309550 | Msa1116130 | -0.800387 | 1.476374e-48 | -8.615850e-47 |
| Msa0309550 | Msa1116690 | 0.805793 | 1.124688e-49 | -8.615850e-47 |
| Msa0309550 | Msa1118750 | 0.829437 | 5.149218e-55 | -8.615850e-47 |
| Msa0309550 | Msa1118930 | 0.810346 | 1.206524e-50 | -8.615850e-47 |
| Msa0309550 | Msa1124540 | -0.841319 | 5.108529e-58 | -8.615850e-47 |
| Msa0309550 | Msa1130110 | 0.800171 | 1.633606e-48 | -8.615850e-47 |
| Msa0309550 | Msa1130210 | -0.811035 | 8.562310e-51 | -8.615850e-47 |
| Msa0309550 | Msa1131940 | -0.853338 | 2.552474e-61 | -8.615850e-47 |
| Msa0309550 | Msa1132890 | 0.822537 | 2.246893e-53 | -8.615850e-47 |
| Msa0309550 | Msa1132950 | 0.812315 | 4.508913e-51 | -8.615850e-47 |
| Msa0309550 | Msa1141250 | -0.802885 | 4.536558e-49 | -8.615850e-47 |
| Msa0309550 | Msa1142500 | 0.817669 | 2.925302e-52 | -8.615850e-47 |
| Msa0309550 | Msa1143930 | -0.857452 | 1.616625e-62 | -8.615850e-47 |
| Msa0309550 | Msa1151710 | 0.807235 | 5.582045e-50 | -8.615850e-47 |
| Msa0309550 | Msa1158670 | 0.843388 | 1.445144e-58 | -8.615850e-47 |
| Msa0309550 | Msa1162550 | -0.809990 | 1.440107e-50 | -8.615850e-47 |
| Msa0309550 | Msa1168040 | -0.808420 | 3.124368e-50 | -8.615850e-47 |
| Msa0309550 | Msa1172670 | 0.808797 | 2.595610e-50 | -8.615850e-47 |
| Msa0309550 | Msa1183100 | -0.829960 | 3.842879e-55 | -8.615850e-47 |
| Msa0309550 | Msa1186950 | -0.800159 | 1.642458e-48 | -8.615850e-47 |
| Msa0309550 | Msa1187520 | 0.849098 | 4.021070e-60 | -8.615850e-47 |
| Msa0309550 | Msa1199560 | 0.820552 | 6.457183e-53 | -8.615850e-47 |
| Msa0309550 | Msa1204980 | -0.827621 | 1.414079e-54 | -8.615850e-47 |
| Msa0309550 | Msa1205010 | -0.834908 | 2.282991e-56 | -8.615850e-47 |
| Msa0309550 | Msa1205130 | 0.805597 | 1.236174e-49 | -8.615850e-47 |
| Msa0309550 | Msa1206020 | 0.818666 | 1.739791e-52 | -8.615850e-47 |
| Msa0309550 | Msa1211150 | -0.803753 | 2.999258e-49 | -8.615850e-47 |
| Msa0309550 | Msa1213440 | -0.815214 | 1.036776e-51 | -8.615850e-47 |
| Msa0309550 | Msa1214880 | 0.804153 | 2.476670e-49 | -8.615850e-47 |
| Msa0309550 | Msa1217430 | -0.853108 | 2.970886e-61 | -8.615850e-47 |
| Msa0309550 | Msa1217810 | 0.871778 | 5.271336e-67 | -8.615850e-47 |
| Msa0309550 | Msa1217830 | 0.846364 | 2.275101e-59 | -8.615850e-47 |
| Msa0309550 | Msa1228210 | 0.807969 | 3.897639e-50 | -8.615850e-47 |
| Msa0309550 | Msa1233500 | 0.827043 | 1.944913e-54 | -8.615850e-47 |
| Msa0309550 | Msa1241820 | 0.801882 | 7.300975e-49 | -8.615850e-47 |
| Msa0309550 | Msa1256540 | -0.829093 | 6.241500e-55 | -8.615850e-47 |
| Msa0309550 | Msa1258380 | -0.828132 | 1.065439e-54 | -8.615850e-47 |
| Msa0309550 | Msa1260130 | 0.815234 | 1.025987e-51 | -8.615850e-47 |
| Msa0309550 | Msa1267260 | 0.808074 | 3.703179e-50 | -8.615850e-47 |
| Msa0309550 | Msa1271200 | 0.815824 | 7.584613e-52 | -8.615850e-47 |
| Msa0309550 | Msa1271210 | 0.802956 | 4.386885e-49 | -8.615850e-47 |
| Msa0309550 | Msa1271300 | 0.802556 | 5.304643e-49 | -8.615850e-47 |
| Msa0309550 | Msa1276440 | 0.814816 | 1.270547e-51 | -8.615850e-47 |
| Msa0309550 | Msa1279210 | 0.837841 | 4.096433e-57 | -8.615850e-47 |
| Msa0309550 | Msa1279650 | 0.802946 | 4.406883e-49 | -8.615850e-47 |
| Msa0309550 | Msa1282920 | 0.861037 | 1.359049e-63 | -8.615850e-47 |
| Msa0309550 | Msa1292730 | 0.823471 | 1.360557e-53 | -8.615850e-47 |
| Msa0309550 | Msa1296960 | -0.831368 | 1.736796e-55 | -8.615850e-47 |
| Msa0309550 | Msa1300050 | 0.825742 | 3.970451e-54 | -8.615850e-47 |
| Msa0309550 | Msa1300350 | -0.815571 | 8.637295e-52 | -8.615850e-47 |
| Msa0309550 | Msa1302100 | 0.816370 | 5.726752e-52 | -8.615850e-47 |
| Msa0309550 | Msa1302190 | -0.867943 | 9.423427e-66 | -8.615850e-47 |
| Msa0309550 | Msa1305340 | 0.809753 | 1.618764e-50 | -8.615850e-47 |
| Msa0309550 | Msa1306750 | 0.815931 | 7.178649e-52 | -8.615850e-47 |
| Msa0309550 | Msa1307740 | 0.864225 | 1.416877e-64 | -8.615850e-47 |
| Msa0309550 | Msa1316560 | -0.803377 | 3.588705e-49 | -8.615850e-47 |
| Msa0309550 | Msa1322190 | 0.882165 | 1.309700e-70 | -8.615850e-47 |
| Msa0309550 | Msa1328700 | 0.829943 | 3.878882e-55 | -8.615850e-47 |
| Msa0309550 | Msa1328850 | 0.808857 | 2.520224e-50 | -8.615850e-47 |
| Msa0309550 | Msa1348950 | 0.800203 | 1.608808e-48 | -8.615850e-47 |
| Msa0309550 | Msa1359650 | -0.821223 | 4.525589e-53 | -8.615850e-47 |
| Msa0309550 | Msa1362880 | 0.800191 | 1.618271e-48 | -8.615850e-47 |
| Msa0309550 | Msa1369530 | 0.831475 | 1.634886e-55 | -8.615850e-47 |
| Msa0309550 | Msa1370340 | 0.815328 | 9.781490e-52 | -8.615850e-47 |
| Msa0309550 | Msa1382160 | 0.803400 | 3.549538e-49 | -8.615850e-47 |
| Msa0309550 | Msa1382930 | 0.814887 | 1.225279e-51 | -8.615850e-47 |
| Msa0309550 | Msa1389830 | 0.817556 | 3.101729e-52 | -8.615850e-47 |
| Msa0309550 | Msa1393040 | 0.825052 | 5.783583e-54 | -8.615850e-47 |
| Msa0309550 | Msa1395660 | 0.812841 | 3.460238e-51 | -8.615850e-47 |
| Msa0309550 | Msa1396830 | 0.801455 | 8.931696e-49 | -8.615850e-47 |
| Msa0309550 | Msa1401290 | 0.810543 | 1.093839e-50 | -8.615850e-47 |
| Msa0309550 | Msa1403340 | 0.813817 | 2.112181e-51 | -8.615850e-47 |
| Msa0309550 | Msa1403580 | -0.827643 | 1.397194e-54 | -8.615850e-47 |
| Msa0309550 | Msa1407600 | 0.804583 | 2.014797e-49 | -8.615850e-47 |
| Msa0309550 | Msa1419110 | 0.800279 | 1.552574e-48 | -8.615850e-47 |
| Msa0309550 | Msa1423450 | 0.824741 | 6.848365e-54 | -8.615850e-47 |
| Msa0309550 | Msa1425010 | 0.852416 | 4.683520e-61 | -8.615850e-47 |
| Msa0309550 | Msa1427830 | 0.844979 | 5.402856e-59 | -8.615850e-47 |
| Msa0309550 | Msa1432790 | 0.844070 | 9.494142e-59 | -8.615850e-47 |
| Msa0309550 | Msa1432800 | 0.829876 | 4.026852e-55 | -8.615850e-47 |
| Msa0309550 | Msa1435370 | 0.800984 | 1.115302e-48 | -8.615850e-47 |
| Msa0309550 | Msa1438910 | 0.805452 | 1.325952e-49 | -8.615850e-47 |
| Msa0309550 | Msa1440000 | 0.825770 | 3.911561e-54 | -8.615850e-47 |
| Msa0309550 | Msa1440600 | 0.823081 | 1.677808e-53 | -8.615850e-47 |
| Msa0309550 | Msa1440610 | 0.804388 | 2.212637e-49 | -8.615850e-47 |
| Msa0309550 | Msa1440910 | 0.805495 | 1.298621e-49 | -8.615850e-47 |
| Msa0309550 | Msa1443290 | -0.840999 | 6.198256e-58 | -8.615850e-47 |
| Msa0309550 | Msa1444250 | -0.827726 | 1.334452e-54 | -8.615850e-47 |
| Msa0309550 | Msa1444740 | 0.823950 | 1.050709e-53 | -8.615850e-47 |
| Msa0309550 | Msa1445030 | 0.813783 | 2.149475e-51 | -8.615850e-47 |
| Msa0309550 | Msa1450020 | 0.806444 | 8.202877e-50 | -8.615850e-47 |
| Msa0309550 | Msa1451620 | -0.829462 | 5.077517e-55 | -8.615850e-47 |
| Msa0309550 | Msa1454110 | 0.830104 | 3.543005e-55 | -8.615850e-47 |
| Msa0309550 | Msa1464940 | 0.812842 | 3.458222e-51 | -8.615850e-47 |
| Msa0309550 | Msa1465960 | 0.811820 | 5.782403e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309550 | MtrunA17_Chr2g0295501 | 93.182 | 44 | 3 | 0 | 1 | 44 | 1 | 44 | 3.56e-24 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 20 sgRNAs with CRISPR-Local
Find 36 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAGGAAGATTGGCTTAGA+AGG | 0.290742 | 2_4:-4103115 | Msa0309550:CDS |
| TGCATGCTGCTCCTTCTTGT+TGG | 0.293203 | 2_4:+4103064 | None:intergenic |
| AGCATGCAAGACCTTGCTTC+TGG | 0.370001 | 2_4:-4103049 | Msa0309550:CDS |
| AGGATGGAACTGTTCTTGTT+GGG | 0.402264 | 2_4:-4103018 | Msa0309550:CDS |
| AAGGATGGAACTGTTCTTGT+TGG | 0.408271 | 2_4:-4103019 | Msa0309550:CDS |
| TCATCAGACCTAAGGAAGAT+TGG | 0.412607 | 2_4:-4103124 | Msa0309550:CDS |
| GCTTTAATAGACAAGTTCTA+TGG | 0.431998 | 2_4:-4103088 | Msa0309550:CDS |
| GCATGCAAGACCTTGCTTCT+GGG | 0.437774 | 2_4:-4103048 | Msa0309550:CDS |
| ATCAAAGTCTTCTGTAGCTA+AGG | 0.443745 | 2_4:-4102840 | Msa0309550:CDS |
| CTTCTAAGCCAATCTTCCTT+AGG | 0.445559 | 2_4:+4103116 | None:intergenic |
| TCAAAGTCTTCTGTAGCTAA+GGG | 0.531279 | 2_4:-4102839 | Msa0309550:CDS |
| TAAGGAAGATTGGCTTAGAA+GGG | 0.540665 | 2_4:-4103114 | Msa0309550:CDS |
| GCTTCTGGGATTAGCAAGGA+TGG | 0.553628 | 2_4:-4103034 | Msa0309550:CDS |
| CACCTCCTTCATCAGACCTA+AGG | 0.563117 | 2_4:-4103132 | Msa0309550:CDS |
| AGTTCTATGGTCCAACAAGA+AGG | 0.572566 | 2_4:-4103075 | Msa0309550:CDS |
| GGATGGAACTGTTCTTGTTG+GGG | 0.579567 | 2_4:-4103017 | Msa0309550:intron |
| ATCTTCCTTAGGTCTGATGA+AGG | 0.601958 | 2_4:+4103127 | None:intergenic |
| CCTTGCTTCTGGGATTAGCA+AGG | 0.605996 | 2_4:-4103038 | Msa0309550:CDS |
| CCTTGCTAATCCCAGAAGCA+AGG | 0.646637 | 2_4:+4103038 | None:intergenic |
| TTCCTTAGGTCTGATGAAGG+AGG | 0.672818 | 2_4:+4103130 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGTGCTTAAAATTTAAA+AGG | + | chr2_4:4103015-4103034 | None:intergenic | 15.0% |
| !!! | AATTTTCCTTAAATTTAAAG+TGG | - | chr2_4:4103032-4103051 | Msa0309550:CDS | 15.0% |
| !!! | ATTTTCCTTAAATTTAAAGT+GGG | - | chr2_4:4103033-4103052 | Msa0309550:CDS | 15.0% |
| GCTTTAATAGACAAGTTCTA+TGG | - | chr2_4:4102874-4102893 | Msa0309550:CDS | 30.0% | |
| AAAATTACCCCAAAATCGTT+GGG | - | chr2_4:4102984-4103003 | Msa0309550:intron | 30.0% | |
| TGAGACCCACTTTAAATTTA+AGG | + | chr2_4:4103041-4103060 | None:intergenic | 30.0% | |
| ATATGTAGAAAAAAGCTCGA+AGG | - | chr2_4:4103082-4103101 | Msa0309550:CDS | 30.0% | |
| !! | TAAGGAAGATTGGCTTAGAA+GGG | - | chr2_4:4102848-4102867 | Msa0309550:CDS | 35.0% |
| !! | TTTGGGGTAATTTTCCCTTA+GGG | + | chr2_4:4102978-4102997 | None:intergenic | 35.0% |
| !!! | TTTTGGGGTAATTTTCCCTT+AGG | + | chr2_4:4102979-4102998 | None:intergenic | 35.0% |
| GAAAATTACCCCAAAATCGT+TGG | - | chr2_4:4102983-4103002 | Msa0309550:intron | 35.0% | |
| AAATTACCCCAAAATCGTTG+GGG | - | chr2_4:4102985-4103004 | Msa0309550:intron | 35.0% | |
| ATCAAAGTCTTCTGTAGCTA+AGG | - | chr2_4:4103122-4103141 | Msa0309550:CDS | 35.0% | |
| TCAAAGTCTTCTGTAGCTAA+GGG | - | chr2_4:4103123-4103142 | Msa0309550:CDS | 35.0% | |
| ATCTTCCTTAGGTCTGATGA+AGG | + | chr2_4:4102838-4102857 | None:intergenic | 40.0% | |
| TCATCAGACCTAAGGAAGAT+TGG | - | chr2_4:4102838-4102857 | Msa0309550:CDS | 40.0% | |
| CTTCTAAGCCAATCTTCCTT+AGG | + | chr2_4:4102849-4102868 | None:intergenic | 40.0% | |
| !! | CTAAGGAAGATTGGCTTAGA+AGG | - | chr2_4:4102847-4102866 | Msa0309550:CDS | 40.0% |
| AGTTCTATGGTCCAACAAGA+AGG | - | chr2_4:4102887-4102906 | Msa0309550:intron | 40.0% | |
| AAGGATGGAACTGTTCTTGT+TGG | - | chr2_4:4102943-4102962 | Msa0309550:intron | 40.0% | |
| AGGATGGAACTGTTCTTGTT+GGG | - | chr2_4:4102944-4102963 | Msa0309550:intron | 40.0% | |
| TGGGTCTCAGTTTCATGTTA+TGG | - | chr2_4:4103052-4103071 | Msa0309550:CDS | 40.0% | |
| TTCCTTAGGTCTGATGAAGG+AGG | + | chr2_4:4102835-4102854 | None:intergenic | 45.0% | |
| GGATGGAACTGTTCTTGTTG+GGG | - | chr2_4:4102945-4102964 | Msa0309550:intron | 45.0% | |
| TGTTGGGGTAAGTTACCCTA+AGG | - | chr2_4:4102960-4102979 | Msa0309550:intron | 45.0% | |
| GTTGGGGTAAGTTACCCTAA+GGG | - | chr2_4:4102961-4102980 | Msa0309550:intron | 45.0% | |
| ! | AGGTCTACCCCAACGATTTT+GGG | + | chr2_4:4102995-4103014 | None:intergenic | 45.0% |
| ! | AAGGTCTACCCCAACGATTT+TGG | + | chr2_4:4102996-4103015 | None:intergenic | 45.0% |
| CACCTCCTTCATCAGACCTA+AGG | - | chr2_4:4102830-4102849 | Msa0309550:CDS | 50.0% | |
| TGCATGCTGCTCCTTCTTGT+TGG | + | chr2_4:4102901-4102920 | None:intergenic | 50.0% | |
| AGCATGCAAGACCTTGCTTC+TGG | - | chr2_4:4102913-4102932 | Msa0309550:intron | 50.0% | |
| GCATGCAAGACCTTGCTTCT+GGG | - | chr2_4:4102914-4102933 | Msa0309550:intron | 50.0% | |
| CCTTGCTAATCCCAGAAGCA+AGG | + | chr2_4:4102927-4102946 | None:intergenic | 50.0% | |
| !! | CCTTGCTTCTGGGATTAGCA+AGG | - | chr2_4:4102924-4102943 | Msa0309550:intron | 50.0% |
| !! | GCTTCTGGGATTAGCAAGGA+TGG | - | chr2_4:4102928-4102947 | Msa0309550:intron | 50.0% |
| ! | GGTCTACCCCAACGATTTTG+GGG | + | chr2_4:4102994-4103013 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 4102826 | 4103158 | 4102826 | ID=Msa0309550;Name=Msa0309550 |
| chr2_4 | mRNA | 4102826 | 4103158 | 4102826 | ID=Msa0309550-mRNA-1;Parent=Msa0309550;Name=Msa0309550-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|1|1|2|0|69 |
| chr2_4 | exon | 4103018 | 4103158 | 4103018 | ID=Msa0309550-mRNA-1:exon:1437;Parent=Msa0309550-mRNA-1 |
| chr2_4 | exon | 4102826 | 4102894 | 4102826 | ID=Msa0309550-mRNA-1:exon:1436;Parent=Msa0309550-mRNA-1 |
| chr2_4 | CDS | 4103018 | 4103158 | 4103018 | ID=Msa0309550-mRNA-1:cds;Parent=Msa0309550-mRNA-1 |
| chr2_4 | CDS | 4102826 | 4102894 | 4102826 | ID=Msa0309550-mRNA-1:cds;Parent=Msa0309550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
