AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1048760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1048760 MtrunA17_Chr7g0217251 77.246 668 55 7 1 656 47 629 0.0 972
Msa1048760 MtrunA17_Chr7g0217251 82.119 151 15 2 600 738 479 629 4.73e-71 244
Msa1048760 MtrunA17_Chr5g0396101 73.307 251 30 2 352 565 2 252 1.47e-108 337
Msa1048760 MtrunA17_Chr5g0396111 51.187 379 99 11 1 315 1 357 6.71e-86 276
Msa1048760 MtrunA17_Chr7g0217261 63.043 276 59 9 1 255 1 254 9.70e-81 272
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1048760 AT4G10070.1 32.224 661 305 35 1 606 1 573 1.06e-42 165
Msa1048760 AT1G33680.1 31.402 535 241 27 1 455 1 489 2.52e-39 156

Find 286 sgRNAs with CRISPR-Local

Find 611 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAATTTGAAGGATCTTT+TGG 0.224942 7_2:-10646048 Msa1048760:CDS
ACCAGGCGAGATTCCGTATC+AGG 0.257233 7_2:-10640453 Msa1048760:CDS
ACCAGGCGAGATTCCGTATC+AGG 0.257233 7_2:-10640909 Msa1048760:CDS
CAGTTTCTCACTTTCTCATT+TGG 0.272778 7_2:+10645303 None:intergenic
TTGAATTTCACCCCTACTTA+TGG 0.274326 7_2:-10648323 Msa1048760:exon
ATGTTGTACCTAGGTAATTC+TGG 0.295808 7_2:+10648185 None:intergenic
TTTCAGCATGATACTTCTTC+TGG 0.297812 7_2:-10647498 Msa1048760:CDS
TCATATGCACCTACTCCTTA+TGG 0.300051 7_2:-10641346 Msa1048760:CDS
CTCCCCTGCTCGGGCTATCA+TGG 0.308630 7_2:-10645469 Msa1048760:CDS
TTCTTTAGAATCATTGGCTT+CGG 0.315961 7_2:+10644749 None:intergenic
AGTCCTTTCTTTAGAATCAT+TGG 0.316797 7_2:+10644743 None:intergenic
GGAATTTCAAACTTCTCATT+TGG 0.317572 7_2:+10645420 None:intergenic
GAAAGGACTGTCCAAGTTAC+TGG 0.320619 7_2:-10644487 Msa1048760:CDS
CTGAACAGGGGATGGACTTA+TGG 0.321988 7_2:+10641117 None:intergenic
TTCTTTAGAATCATCGGCTT+CGG 0.324296 7_2:+10644507 None:intergenic
CCAAGGAGCAGTTACGGTTC+TGG 0.331193 7_2:-10641301 Msa1048760:CDS
TAATTGTAATTAATCTGAAC+AGG 0.338077 7_2:+10641103 None:intergenic
AAGTTTATCACCTTCTCATT+TGG 0.340261 7_2:+10645864 None:intergenic
ATAAGGACCGGTACAGTGTT+GGG 0.343519 7_2:+10641150 None:intergenic
GATCTGGTGGTCCACCACTA+TGG 0.343715 7_2:-10641447 Msa1048760:CDS
AGTTGTTCAATTGATTTAGA+TGG 0.351055 7_2:+10647546 None:intergenic
GGTCAGCAAGGTTCACATTA+TGG 0.354937 7_2:-10641424 Msa1048760:CDS
TATGGCAGGCCACCATTGTT+TGG 0.373347 7_2:-10640743 Msa1048760:CDS
TATGGCAGGCCACCATTGTT+TGG 0.373347 7_2:-10640866 Msa1048760:CDS
TATGGCAGGCCACCATTGTT+TGG 0.374810 7_2:-10640656 Msa1048760:CDS
TATCTCAGGCCACCATTGTT+TGG 0.375787 7_2:-10640533 Msa1048760:CDS
TCTTTAGAATCATTGGCTTC+GGG 0.376787 7_2:+10644750 None:intergenic
TCTTTAGAATCATCGGCTTC+GGG 0.381660 7_2:+10644508 None:intergenic
CGCCTGGTTGAGTGGCTCTA+GGG 0.386919 7_2:+10640468 None:intergenic
CGCCTGGTTGAGTGGCTCTA+GGG 0.386919 7_2:+10640591 None:intergenic
CGCCTGGTTGAGTGGCTCTA+GGG 0.386919 7_2:+10640801 None:intergenic
CTGTGAACATGGCATCCATT+AGG 0.387204 7_2:+10646003 None:intergenic
CTCCCCTGCTCAGGCTATTG+TGG 0.387651 7_2:-10645352 Msa1048760:CDS
CTCCTCAACGAGAATCTCTT+TGG 0.388726 7_2:+10647569 None:intergenic
CTCAAGACCTCTCCCCTGCT+CGG 0.391310 7_2:-10645479 Msa1048760:CDS
GCCTCTTATCAGCGGTAACT+TGG 0.393448 7_2:+10644718 None:intergenic
AACGAGAATCTCTTTGGTAT+TGG 0.395832 7_2:+10647575 None:intergenic
AATTGAGGTTCCTAGCAATA+AGG 0.397890 7_2:-10647430 Msa1048760:intron
AAGGCCTCACCAGAGTTTGC+AGG 0.398717 7_2:-10641269 Msa1048760:CDS
AGGGGCCGCCCTCACACAAC+AGG 0.399074 7_2:-10641249 Msa1048760:CDS
AATTGAAATTGCACAAGAAA+TGG 0.400768 7_2:-10644694 Msa1048760:CDS
ACTTATGGCCGAAGAAGAAT+TGG 0.406832 7_2:-10648308 Msa1048760:exon
ATCTGGTGGTCCACCACTAT+GGG 0.410501 7_2:-10641446 Msa1048760:CDS
TCCCCTGCTCAGGCTATTGT+GGG 0.411748 7_2:-10645351 Msa1048760:CDS
TTGCTTGAGCCCAGGCTTGA+GGG 0.412088 7_2:+10641032 None:intergenic
AAGGACAACATCCAGTCTTA+TGG 0.414360 7_2:-10640373 Msa1048760:CDS
TCGCCTGGTTGAGTGGCTCT+AGG 0.418678 7_2:+10640467 None:intergenic
TCGCCTGGTTGAGTGGCTCT+AGG 0.418678 7_2:+10640590 None:intergenic
TCGCCTGGTTGAGTGGCTCT+AGG 0.418678 7_2:+10640800 None:intergenic
TCGCCTGGTTGAGTGGCTCT+AGG 0.418678 7_2:+10640923 None:intergenic
AACAACAACCAATTCTTCTT+CGG 0.421576 7_2:+10648300 None:intergenic
GCCTCTTATCACCAGTAACT+TGG 0.424651 7_2:+10644476 None:intergenic
AACAGGGGTTATGATCATTA+TGG 0.425468 7_2:-10641232 Msa1048760:CDS
GATGCACCTCCACAGCAGTA+TGG 0.435538 7_2:-10641007 Msa1048760:CDS
ATATGAGTTCGAAAACCTAA+TGG 0.435925 7_2:-10646018 Msa1048760:CDS
TCCAAGTTACCGCTGATAAG+AGG 0.445854 7_2:-10644719 Msa1048760:CDS
TACCGTCCGCCACAAGGATC+TGG 0.447453 7_2:-10641463 Msa1048760:CDS
GTGGCGGACGGTAGGCCTGC+TGG 0.447974 7_2:+10641473 None:intergenic
GATTGATTATGAGAGGGATA+TGG 0.448365 7_2:+10641367 None:intergenic
CTTTAAGGAGTTCAATTTGA+AGG 0.450357 7_2:-10646057 Msa1048760:intron
CATGGCAGGCCACCATTGTA+TGG 0.454068 7_2:-10640410 Msa1048760:CDS
TTCTTCTTCGGCCATAAGTA+GGG 0.455316 7_2:+10648312 None:intergenic
GAAATTCCACAGGCTGATGC+TGG 0.457417 7_2:-10645909 Msa1048760:intron
TAGGGTGGCCGCCATAAGAC+TGG 0.458568 7_2:+10640362 None:intergenic
GACAAAGGAAGCCTTGAGTC+AGG 0.459926 7_2:-10644431 Msa1048760:intron
GGCAAAGGAAGCCTTGAGTC+AGG 0.459926 7_2:-10644673 Msa1048760:intron
ATTCTTCTTCGGCCATAAGT+AGG 0.460818 7_2:+10648311 None:intergenic
GCCAGAGGAAAATGCTCATT+CGG 0.461954 7_2:-10647649 Msa1048760:CDS
TGCATCATTTGCTTGAGCCC+AGG 0.464220 7_2:+10641024 None:intergenic
TATGGAAAGCCACCATTGTA+TGG 0.466268 7_2:-10640989 Msa1048760:CDS
GAAATTCCACAGGCTGATGC+TGG 0.467198 7_2:-10645405 Msa1048760:CDS
TGATCATTATGGTGGACAAA+GGG 0.467199 7_2:-10641221 Msa1048760:CDS
GAGCAGTTACGGTTCTGGTT+GGG 0.467510 7_2:-10641296 Msa1048760:CDS
TCGAGGCCTCTCCCCTGCTC+AGG 0.468246 7_2:-10645361 Msa1048760:CDS
TGGAAATTATCCTCAACATA+TGG 0.468726 7_2:-10641326 Msa1048760:CDS
GATAGATCTGGGATGCGGGG+CGG 0.470004 7_2:+10641174 None:intergenic
CCTCCATATGGATATTGTGC+AGG 0.471773 7_2:+10641067 None:intergenic
CCCTGATACGGAATCTCGCC+TGG 0.475637 7_2:+10640452 None:intergenic
CCCTGATACGGAATCTCGCC+TGG 0.475637 7_2:+10640908 None:intergenic
GGACAACATCCAGAGTCTTA+TGG 0.475815 7_2:-10640617 Msa1048760:CDS
GGACAACATCCAGAGTCTTA+TGG 0.475815 7_2:-10640827 Msa1048760:CDS
TCCCCTGCTCGGGCTATCAT+GGG 0.476995 7_2:-10645468 Msa1048760:CDS
TAAAGATAATTCAGAAGAAA+CGG 0.480498 7_2:-10647607 Msa1048760:CDS
GGGGATAGATCTGGGATGCG+GGG 0.482378 7_2:+10641171 None:intergenic
GGCCTGCCATGTGATTGTGC+TGG 0.483736 7_2:+10640422 None:intergenic
TCATTTGGAACTTCACGTGC+AGG 0.483750 7_2:+10645879 None:intergenic
ATCAGGTGGTTTCAGCCAGC+AGG 0.484565 7_2:-10641488 Msa1048760:CDS
GAAATTTCACAGGACGATGA+TGG 0.489129 7_2:-10645522 Msa1048760:intron
CCAGAACCGTAACTGCTCCT+TGG 0.490935 7_2:+10641301 None:intergenic
AGTCCTTTCTTTAGAATCAT+CGG 0.492156 7_2:+10644501 None:intergenic
GTTGTGTCAGACCTGGATAT+AGG 0.492547 7_2:+10647465 None:intergenic
GCCCAGGCTTGAGGGTAGGT+TGG 0.492941 7_2:+10641040 None:intergenic
TAGCCTGTCAAGTCATCATC+AGG 0.494848 7_2:-10641505 Msa1048760:CDS
ATCCAACCTACCCTCAAGCC+TGG 0.495983 7_2:-10641042 Msa1048760:CDS
CTCCAGCACAATCATATCTC+AGG 0.497449 7_2:-10640547 Msa1048760:CDS
AGGGCGGCCCCTGCAAACTC+TGG 0.497694 7_2:+10641260 None:intergenic
GTATCTAACCTCTGCACTCA+TGG 0.499696 7_2:+10645617 None:intergenic
TCAAGACCTCTCCCCTGCTC+GGG 0.499866 7_2:-10645478 Msa1048760:CDS
CGCCTGGTTGAGTGGCTCTA+GGG 0.500281 7_2:+10640924 None:intergenic
TGTTGAGGATAATTTCCATA+AGG 0.501436 7_2:+10641331 None:intergenic
GATCCCACAATAGCCTGAGC+AGG 0.502943 7_2:+10645348 None:intergenic
TCCAAGTTACTGGTGATAAG+AGG 0.505553 7_2:-10644477 Msa1048760:CDS
TCTACTCCAGCACAATCATA+TGG 0.505828 7_2:-10640884 Msa1048760:CDS
GCCTGGTTGAGTGGCTCTAG+GGG 0.506058 7_2:+10640469 None:intergenic
GCCTGGTTGAGTGGCTCTAG+GGG 0.506058 7_2:+10640592 None:intergenic
GCCTGGTTGAGTGGCTCTAG+GGG 0.506058 7_2:+10640802 None:intergenic
CTTATGGAGGGTAAAGGATA+AGG 0.506258 7_2:+10641133 None:intergenic
TTTGCTTGAGCCCAGGCTTG+AGG 0.508013 7_2:+10641031 None:intergenic
GGTTCTACTCCAGCACCATA+TGG 0.508243 7_2:-10640674 Msa1048760:CDS
CCATGATACGGAATCTCGCC+TGG 0.509473 7_2:+10640575 None:intergenic
CCATGATACGGAATCTCGCC+TGG 0.509473 7_2:+10640695 None:intergenic
AGACAAGGCAGAAAAGCTAT+TGG 0.511880 7_2:-10645643 Msa1048760:CDS
TGTACTCCAGCACAATCATA+TGG 0.513671 7_2:-10640761 Msa1048760:CDS
GATCCCATGATAGCCCGAGC+AGG 0.516227 7_2:+10645465 None:intergenic
ATGGCTCCAAGGAGCAGTTA+CGG 0.518058 7_2:-10641307 Msa1048760:CDS
AACAATGGTGGCCTGCCATA+TGG 0.518454 7_2:+10640659 None:intergenic
TGTGGATGCTGCCCTTGTGA+AGG 0.518910 7_2:+10640959 None:intergenic
CCAGGCGAGATTCCGTATCA+TGG 0.519439 7_2:-10640575 Msa1048760:CDS
CCAGGCGAGATTCCGTATCA+TGG 0.519439 7_2:-10640695 Msa1048760:CDS
TGTGGTTGTTGTGTCAGACC+TGG 0.519580 7_2:+10647458 None:intergenic
CCATGATACGGAATCTCGCC+TGG 0.519692 7_2:+10640785 None:intergenic
CATATTACTATCAGCATCGC+TGG 0.520981 7_2:-10641390 Msa1048760:CDS
TAACAGACATGATGAAAAGA+AGG 0.521017 7_2:-10647679 Msa1048760:CDS
AGGCCTCGAGCTACAAGTGC+AGG 0.522201 7_2:+10645375 None:intergenic
GAAGTATCATGCTGAAAGGT+GGG 0.522280 7_2:+10647504 None:intergenic
CGGAATCTCGCCTGGTTGAG+TGG 0.522392 7_2:+10640460 None:intergenic
CGGAATCTCGCCTGGTTGAG+TGG 0.522392 7_2:+10640583 None:intergenic
CGGAATCTCGCCTGGTTGAG+TGG 0.522392 7_2:+10640703 None:intergenic
CGGAATCTCGCCTGGTTGAG+TGG 0.522392 7_2:+10640793 None:intergenic
CGGAATCTCGCCTGGTTGAG+TGG 0.522392 7_2:+10640916 None:intergenic
CACCCTAGAGCCACTCAACC+AGG 0.523349 7_2:-10640926 Msa1048760:CDS
TGATAGCCCGAGCAGGGGAG+AGG 0.524339 7_2:+10645472 None:intergenic
GATAAGGACCGGTACAGTGT+TGG 0.525106 7_2:+10641149 None:intergenic
AAGCCAATGATTCTAAAGAA+AGG 0.525928 7_2:-10644746 Msa1048760:CDS
GGATGTTGTCCTTGTGAAGG+TGG 0.528344 7_2:+10640506 None:intergenic
GGATGTTGTCCTTGTGAAGG+TGG 0.528344 7_2:+10640629 None:intergenic
GGATGTTGTCCTTGTGAAGG+TGG 0.528344 7_2:+10640839 None:intergenic
CCACCTGATGATGACTTGAC+AGG 0.529512 7_2:+10641502 None:intergenic
GATGTACATACCTTATTGCT+AGG 0.530908 7_2:+10647420 None:intergenic
AGGCCTCACCAGAGTTTGCA+GGG 0.531736 7_2:-10641268 Msa1048760:CDS
CAATAGCCTGAGCAGGGGAG+AGG 0.532008 7_2:+10645355 None:intergenic
TAGGTTGGATGTCCTCCATA+TGG 0.532711 7_2:+10641055 None:intergenic
GGTGGCCTGCCATATGGTGC+TGG 0.532857 7_2:+10640665 None:intergenic
AGGTCTTGAGCTACAAATGC+AGG 0.532914 7_2:+10645492 None:intergenic
ACGGTTCTGGTTGGGAGCAA+AGG 0.533493 7_2:-10641288 Msa1048760:CDS
GACAAAAGCAACCTATATCC+AGG 0.533532 7_2:-10647476 Msa1048760:CDS
GGATGCTGCCCTTGTGAAGG+TGG 0.534828 7_2:+10640962 None:intergenic
TAATTAATCTGAACAGGGGA+TGG 0.535256 7_2:+10641109 None:intergenic
CCAGGCGAGATTCCGTATCA+TGG 0.541393 7_2:-10640785 Msa1048760:CDS
TTGAGCCCAGGCTTGAGGGT+AGG 0.542149 7_2:+10641036 None:intergenic
CTACTCCAGCACCATATGGC+AGG 0.542173 7_2:-10640670 Msa1048760:CDS
AGGAACCTCAATTTCTTGTG+TGG 0.543235 7_2:+10647440 None:intergenic
CCTTCACGAGCCACTCAACC+AGG 0.543885 7_2:-10640713 Msa1048760:CDS
CTCCATATGGATATTGTGCA+GGG 0.544808 7_2:+10641068 None:intergenic
GGCCTGCCATATGATTGTGC+TGG 0.545310 7_2:+10640755 None:intergenic
GGCCTGCCATATGATTGTGC+TGG 0.545310 7_2:+10640878 None:intergenic
AAGCCGATGATTCTAAAGAA+AGG 0.546417 7_2:-10644504 Msa1048760:CDS
CTCCAGCACAATCATATGGC+AGG 0.546666 7_2:-10640757 Msa1048760:CDS
TTCAATTTGCCTCTTATCAG+CGG 0.547206 7_2:+10644710 None:intergenic
CTCCAGCACAATCATATGGC+AGG 0.547509 7_2:-10640880 Msa1048760:CDS
AGATCCTTGTGGCGGACGGT+AGG 0.547916 7_2:+10641465 None:intergenic
AGAATCTCTTTGGTATTGGT+AGG 0.550145 7_2:+10647579 None:intergenic
TGAGAAGTTTGAAATTCCAC+AGG 0.551503 7_2:-10645415 Msa1048760:CDS
TGCATATGATTGATTATGAG+AGG 0.551522 7_2:+10641360 None:intergenic
AACAACCACACAAGAAATTG+AGG 0.552466 7_2:-10647445 Msa1048760:CDS
GGCTTTCCATACTGCTGTGG+AGG 0.552499 7_2:+10641001 None:intergenic
TAAGGACCGGTACAGTGTTG+GGG 0.552946 7_2:+10641151 None:intergenic
TTCACAAGGGCAGCATCCAC+AGG 0.553792 7_2:-10640957 Msa1048760:CDS
CCTGGTTGAGTGGCTCGTGA+AGG 0.555763 7_2:+10640713 None:intergenic
GTATCTAACCTCTGTGAACA+TGG 0.556597 7_2:+10645992 None:intergenic
AGAAGTATCATGCTGAAAGG+TGG 0.557514 7_2:+10647503 None:intergenic
GGAGCAGTTACGGTTCTGGT+TGG 0.559653 7_2:-10641297 Msa1048760:CDS
CAGGCCTACCGTCCGCCACA+AGG 0.560264 7_2:-10641469 Msa1048760:CDS
TCTGGATGTTGTCCTTGTGA+AGG 0.560326 7_2:+10640503 None:intergenic
TCCAACCTACCCTCAAGCCT+GGG 0.561080 7_2:-10641041 Msa1048760:CDS
CCTGGTTGAGTGGCTCTAGG+GGG 0.564374 7_2:+10640470 None:intergenic
CCTGGTTGAGTGGCTCTAGG+GGG 0.564374 7_2:+10640593 None:intergenic
CCTGGTTGAGTGGCTCTAGG+GGG 0.564374 7_2:+10640803 None:intergenic
GGCCTGAGATATGATTGTGC+TGG 0.566446 7_2:+10640545 None:intergenic
ATCCCATGATAGCCCGAGCA+GGG 0.569495 7_2:+10645466 None:intergenic
CTCCAGCACAATCACATGGC+AGG 0.569765 7_2:-10640424 Msa1048760:CDS
GGATGTTGTCCTTGTGAAGG+TGG 0.573281 7_2:+10640383 None:intergenic
CTCCTTGGAGCCATATGTTG+AGG 0.573692 7_2:+10641316 None:intergenic
AAAGGTGGGATCATTCGAGC+TGG 0.574288 7_2:+10647518 None:intergenic
GGACAACATCCAGAGTCCTA+TGG 0.576552 7_2:-10640494 Msa1048760:CDS
GGTTGAGTGGCTCGTGAAGG+TGG 0.577723 7_2:+10640716 None:intergenic
GAGGCAAATTGAAATTGCAC+AGG 0.580541 7_2:-10644458 Msa1048760:CDS
GGCCCCTGCAAACTCTGGTG+AGG 0.583174 7_2:+10641265 None:intergenic
ATGATCATTATGGTGGACAA+AGG 0.586741 7_2:-10641222 Msa1048760:CDS
GGATAATTTCCATAAGGAGT+AGG 0.588588 7_2:+10641337 None:intergenic
TCTGGATGTTGTCCTTGTGA+AGG 0.589660 7_2:+10640626 None:intergenic
TCTGGATGTTGTCCTTGTGA+AGG 0.589660 7_2:+10640836 None:intergenic
GATGGACTTATGGAGGGTAA+AGG 0.592593 7_2:+10641127 None:intergenic
CACCAGATCCTTGTGGCGGA+CGG 0.592623 7_2:+10641461 None:intergenic
ATCCCACAATAGCCTGAGCA+GGG 0.592936 7_2:+10645349 None:intergenic
AACAGGGGATGGACTTATGG+AGG 0.593055 7_2:+10641120 None:intergenic
TTGGCTTCGGGAAGATGTTG+AGG 0.594813 7_2:+10644762 None:intergenic
CTGGTTGAGTGGCTCTAGGG+GGG 0.596393 7_2:+10640471 None:intergenic
CTGGTTGAGTGGCTCTAGGG+GGG 0.596393 7_2:+10640594 None:intergenic
CTGGTTGAGTGGCTCTAGGG+GGG 0.596393 7_2:+10640804 None:intergenic
GAACTTGCGCTTACAATCAG+AGG 0.601991 7_2:+10648264 None:intergenic
ATCCTCAACATATGGCTCCA+AGG 0.603445 7_2:-10641318 Msa1048760:CDS
GGTGGCTTTCCATACTGCTG+TGG 0.604041 7_2:+10640998 None:intergenic
TACCAAAGAGATTCTCGTTG+AGG 0.605338 7_2:-10647571 Msa1048760:CDS
TCTTCTTCGGCCATAAGTAG+GGG 0.607893 7_2:+10648313 None:intergenic
AGTCAAACAAACCTGACTCA+AGG 0.609370 7_2:+10644420 None:intergenic
AGTAAAACAAACCTGACTCA+AGG 0.609370 7_2:+10644662 None:intergenic
CCAGGCGAGATTCCGTATCA+GGG 0.609811 7_2:-10640452 Msa1048760:CDS
CCAGGCGAGATTCCGTATCA+GGG 0.609811 7_2:-10640908 Msa1048760:CDS
TTTGGCATGCCACCTTCACA+AGG 0.611493 7_2:-10640515 Msa1048760:CDS
TTTGGCATGCCACCTTCACA+AGG 0.611493 7_2:-10640638 Msa1048760:CDS
TTTGGCATGCCACCTTCACA+AGG 0.611493 7_2:-10640848 Msa1048760:CDS
CCACCACTATGGGGTCAGCA+AGG 0.612728 7_2:-10641436 Msa1048760:CDS
TATGGCGTGCCACCTTCACA+AGG 0.616928 7_2:-10640971 Msa1048760:CDS
CGATGCTGATAGTAATATGA+TGG 0.617010 7_2:+10641394 None:intergenic
TCGGCTTCGGGAAGATGTTG+AGG 0.617094 7_2:+10644520 None:intergenic
TAACCCCTGTTGTGTGAGGG+CGG 0.617324 7_2:+10641244 None:intergenic
CTGGTTGAGTGGCTCTAGGG+TGG 0.617348 7_2:+10640927 None:intergenic
AAGGACCGGTACAGTGTTGG+GGG 0.617380 7_2:+10641152 None:intergenic
AGAAGAAGTATCATGCTGAA+AGG 0.621992 7_2:+10647500 None:intergenic
GAACCTCCAGCATCAGCCTG+TGG 0.625973 7_2:+10645399 None:intergenic
GGGGCCGCCCTCACACAACA+GGG 0.626489 7_2:-10641248 Msa1048760:CDS
GGAGGGTAAAGGATAAGGAC+CGG 0.627635 7_2:+10641138 None:intergenic
AGGGGTTATGATCATTATGG+TGG 0.627740 7_2:-10641229 Msa1048760:CDS
TCCCATGATAGCCCGAGCAG+GGG 0.628243 7_2:+10645467 None:intergenic
TGCTGATAGTAATATGATGG+TGG 0.628397 7_2:+10641397 None:intergenic
GAAGATCAACACTCTGATGA+CGG 0.628431 7_2:-10648241 Msa1048760:CDS
ACGTGAAGTTCCAAATGAGA+AGG 0.630318 7_2:-10645874 Msa1048760:intron
GCTGGAGTAGAACCCTGATA+CGG 0.630359 7_2:+10640440 None:intergenic
GCTGGAGTAGAACCCTGATA+CGG 0.630359 7_2:+10640896 None:intergenic
AATTGTAATTAATCTGAACA+GGG 0.630538 7_2:+10641104 None:intergenic
CCATATGGATATTGTGCAGG+GGG 0.630768 7_2:+10641070 None:intergenic
GATGATAACCAGAATTACCT+AGG 0.632946 7_2:-10648193 Msa1048760:intron
AACTTGCGCTTACAATCAGA+GGG 0.633621 7_2:+10648265 None:intergenic
GCTGGAGTAGAACCATGATA+CGG 0.633938 7_2:+10640683 None:intergenic
AAAGAAGGTTGCTGAGCCAG+AGG 0.634204 7_2:-10647664 Msa1048760:CDS
GCATATGATTGATTATGAGA+GGG 0.634444 7_2:+10641361 None:intergenic
CTGGTTGAGTGGCTCTAGGG+TGG 0.634984 7_2:+10640347 None:intergenic
GAACCTTGCTGACCCCATAG+TGG 0.636422 7_2:+10641433 None:intergenic
CGTCCGCCACAAGGATCTGG+TGG 0.637608 7_2:-10641460 Msa1048760:CDS
GCTGGAGTACAACCATGATA+CGG 0.638390 7_2:+10640773 None:intergenic
ATTCCACAGGCTGATGCTGG+AGG 0.639608 7_2:-10645402 Msa1048760:CDS
AATTGCACAAGAAATGGCAA+AGG 0.641008 7_2:-10644688 Msa1048760:CDS
GATCATTATGGTGGACAAAG+GGG 0.641676 7_2:-10641220 Msa1048760:CDS
GGTGGCACGCCATACAATGG+TGG 0.642515 7_2:+10640401 None:intergenic
TCTCCTGCACTTGTAGCTCG+AGG 0.645902 7_2:-10645378 Msa1048760:CDS
ATTTCACAGGACGATGATGG+AGG 0.647200 7_2:-10645519 Msa1048760:intron
ATCATAACCCCTGTTGTGTG+AGG 0.648263 7_2:+10641240 None:intergenic
GCTGGAGTAGAACCATGATA+CGG 0.649951 7_2:+10640563 None:intergenic
GGACCACCAGATCCTTGTGG+CGG 0.656693 7_2:+10641457 None:intergenic
TGGTTATCATCGTCAAGACA+AGG 0.656873 7_2:+10648205 None:intergenic
GGTGGCACGCCATACAATGG+TGG 0.659754 7_2:+10640980 None:intergenic
TATGGCGTGCCACCTTCACA+AGG 0.660463 7_2:-10640392 Msa1048760:CDS
CTAGGGTGGACATAAGCCTG+TGG 0.661544 7_2:+10640941 None:intergenic
GACAACATCCAGTCTTATGG+CGG 0.662824 7_2:-10640370 Msa1048760:CDS
AATTGCACAGGAAATGACAA+AGG 0.663160 7_2:-10644446 Msa1048760:CDS
TCCCACAATAGCCTGAGCAG+GGG 0.667257 7_2:+10645350 None:intergenic
GGCCTCACCAGAGTTTGCAG+GGG 0.668815 7_2:-10641267 Msa1048760:CDS
TCATAACCCCTGTTGTGTGA+GGG 0.668905 7_2:+10641241 None:intergenic
TCCATATGGATATTGTGCAG+GGG 0.669519 7_2:+10641069 None:intergenic
AGAGGAAAATGCTCATTCGG+AGG 0.674893 7_2:-10647646 Msa1048760:CDS
ACTGGATGTTGTCCTTGTGA+AGG 0.675212 7_2:+10640380 None:intergenic
CCTGCACAATATCCATATGG+AGG 0.675215 7_2:-10641067 Msa1048760:CDS
GCTGATAGTAATATGATGGT+GGG 0.679017 7_2:+10641398 None:intergenic
ATTGTAATTAATCTGAACAG+GGG 0.679692 7_2:+10641105 None:intergenic
TCTACTCCAGCACAATCACA+TGG 0.682255 7_2:-10640428 Msa1048760:CDS
CCTTGCTGACCCCATAGTGG+TGG 0.683281 7_2:+10641436 None:intergenic
ATTGGATGCCATGAGTGCAG+AGG 0.684700 7_2:-10645625 Msa1048760:intron
CCTGTCAAGTCATCATCAGG+TGG 0.685141 7_2:-10641502 Msa1048760:CDS
GGGCCGCCCTCACACAACAG+GGG 0.685494 7_2:-10641247 Msa1048760:CDS
GAAGGTGGCACGCCATACAA+TGG 0.687612 7_2:+10640398 None:intergenic
GAAGGTGGCACGCCATACAA+TGG 0.687612 7_2:+10640977 None:intergenic
GGTGGACCACCAGATCCTTG+TGG 0.688140 7_2:+10641454 None:intergenic
TCTGGTGGTCCACCACTATG+GGG 0.696904 7_2:-10641445 Msa1048760:CDS
GAAGGTGGCATGCCAAACAA+TGG 0.699502 7_2:+10640731 None:intergenic
GGTGGCATGCCAAACAATGG+TGG 0.699630 7_2:+10640524 None:intergenic
GGTGGCATGCCAAACAATGG+TGG 0.699630 7_2:+10640647 None:intergenic
GGTGGCATGCCAAACAATGG+TGG 0.699630 7_2:+10640734 None:intergenic
GGTGGCATGCCAAACAATGG+TGG 0.699630 7_2:+10640857 None:intergenic
ACAGGGGATGGACTTATGGA+GGG 0.703309 7_2:+10641121 None:intergenic
GAAGGTGGCATGCCAAACAA+TGG 0.715515 7_2:+10640521 None:intergenic
GAAGGTGGCATGCCAAACAA+TGG 0.715515 7_2:+10640644 None:intergenic
GAAGGTGGCATGCCAAACAA+TGG 0.715515 7_2:+10640854 None:intergenic
GATAGTAATATGATGGTGGG+TGG 0.723828 7_2:+10641401 None:intergenic
ATGGCGTGCCACCTTCACAA+GGG 0.726964 7_2:-10640970 Msa1048760:CDS
AATGGATGCCATGTTCACAG+AGG 0.777271 7_2:-10646000 Msa1048760:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATATAATTTATGAAAT+GGG + chr7_2:10643611-10643630 None:intergenic 10.0%
!! ATGAAATATAATTTATGAAA+TGG + chr7_2:10643612-10643631 None:intergenic 10.0%
!!! TAAAAATATTTAATTGACTT+TGG + chr7_2:10645027-10645046 None:intergenic 10.0%
!!! AAAGTCAATTAAATATTTTT+AGG - chr7_2:10645026-10645045 Msa1048760:intron 10.0%
!! TATAATACAAAACAATATAA+TGG + chr7_2:10645863-10645882 None:intergenic 10.0%
!!! TGTTAAGTAAATTTTAATTA+AGG + chr7_2:10646153-10646172 None:intergenic 10.0%
!!! ATAAGTTATAAGCTTTTATA+AGG - chr7_2:10640666-10640685 Msa1048760:CDS 15.0%
!!! GTTTTTTGATAATAATATCT+TGG - chr7_2:10640688-10640707 Msa1048760:CDS 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr7_2:10640871-10640890 None:intergenic 15.0%
!!! TCCATAATTTTTTTTGTAAT+GGG + chr7_2:10642262-10642281 None:intergenic 15.0%
!!! ATCCATAATTTTTTTTGTAA+TGG + chr7_2:10642263-10642282 None:intergenic 15.0%
!! AAATGTAAAACATAAATAGA+CGG + chr7_2:10643439-10643458 None:intergenic 15.0%
!! AAATATAATTTATGAAATGG+GGG + chr7_2:10643609-10643628 None:intergenic 15.0%
!! GAAATATAATTTATGAAATG+GGG + chr7_2:10643610-10643629 None:intergenic 15.0%
!!! TGAAGTTTTAAATTTTGAAA+GGG - chr7_2:10643804-10643823 Msa1048760:intron 15.0%
!!! TGTTAAGTAAATTTTAATCA+AGG - chr7_2:10645496-10645515 Msa1048760:CDS 15.0%
!!! ATATTGTTTTGTATTATAAG+AGG - chr7_2:10645865-10645884 Msa1048760:intron 15.0%
!! AAACATATATTTAACTAAAG+AGG - chr7_2:10645911-10645930 Msa1048760:intron 15.0%
!! AACTGGATTTAATATTTAAT+TGG - chr7_2:10647076-10647095 Msa1048760:intron 15.0%
!!! TGTTATTAATGTTATGGTTT+TGG - chr7_2:10640997-10641016 Msa1048760:CDS 20.0%
!! TAAAGATAATTCAGAAGAAA+CGG - chr7_2:10641102-10641121 Msa1048760:CDS 20.0%
!!! CTGATTTAATTTGTATTGTT+TGG - chr7_2:10641421-10641440 Msa1048760:CDS 20.0%
!!! TTTTTTCAATTAAGACTACA+GGG - chr7_2:10641514-10641533 Msa1048760:intron 20.0%
!! AGCTAATAAAAATAAGCTAT+AGG - chr7_2:10641602-10641621 Msa1048760:intron 20.0%
!!! TGAACTTTAGAAAAAACAAT+TGG + chr7_2:10642055-10642074 None:intergenic 20.0%
!! ACCCATTACAAAAAAAATTA+TGG - chr7_2:10642258-10642277 Msa1048760:intron 20.0%
!! AAAAAATTATGGATTCTACT+TGG - chr7_2:10642269-10642288 Msa1048760:intron 20.0%
!! AAAAATTATGGATTCTACTT+GGG - chr7_2:10642270-10642289 Msa1048760:intron 20.0%
!! AAAAAGTCAAAATCAAAACT+AGG + chr7_2:10642568-10642587 None:intergenic 20.0%
!!! GTTCAATTTGAATGATTTTT+TGG - chr7_2:10643036-10643055 Msa1048760:intron 20.0%
!!! TTTAACTTTTGAAATTTCAC+AGG - chr7_2:10643177-10643196 Msa1048760:intron 20.0%
!! TTGAATCACAAAATTTATAC+AGG - chr7_2:10643484-10643503 Msa1048760:intron 20.0%
!! ATGTGAAAACTTCTAATAAA+TGG + chr7_2:10643674-10643693 None:intergenic 20.0%
!!! AGTTTTTGGTTTAAAATTCT+TGG - chr7_2:10643746-10643765 Msa1048760:intron 20.0%
!!! CTGAAGTTTTAAATTTTGAA+AGG - chr7_2:10643803-10643822 Msa1048760:intron 20.0%
!!! GAAGTTTTAAATTTTGAAAG+GGG - chr7_2:10643805-10643824 Msa1048760:intron 20.0%
!!! AAGTTTTAAATTTTGAAAGG+GGG - chr7_2:10643806-10643825 Msa1048760:intron 20.0%
!!! TGTACAGTAAAATTCTTTTT+AGG - chr7_2:10643847-10643866 Msa1048760:intron 20.0%
!!! TGTACAGTAAAATTCTTTTT+AGG - chr7_2:10643847-10643866 Msa1048760:intron 20.0%
!! CAAAAAATCACAACATAAAA+AGG + chr7_2:10644440-10644459 None:intergenic 20.0%
!!! GTATTTTCATGTTAAAAACA+TGG - chr7_2:10644462-10644481 Msa1048760:CDS 20.0%
!! ATTAATTACACATGAATAGA+AGG - chr7_2:10645754-10645773 Msa1048760:intron 20.0%
!!! ATTTTGTCTTTAAAACATGT+TGG - chr7_2:10646570-10646589 Msa1048760:intron 20.0%
!! AGCAAAAAAAAAAAGGAAAA+TGG + chr7_2:10646750-10646769 None:intergenic 20.0%
!! AATTGTAATTAATCTGAACA+GGG + chr7_2:10647608-10647627 None:intergenic 20.0%
!! TAATTGTAATTAATCTGAAC+AGG + chr7_2:10647609-10647628 None:intergenic 20.0%
! TTAGAATAAATGTTGTACCT+AGG + chr7_2:10640536-10640555 None:intergenic 25.0%
!! ATAGCGTGTTATTAATGTTA+TGG - chr7_2:10640991-10641010 Msa1048760:CDS 25.0%
!! AGTTGTTCAATTGATTTAGA+TGG + chr7_2:10641166-10641185 None:intergenic 25.0%
!!! ATTTTTTACCAGAGTTTAAG+AGG + chr7_2:10641314-10641333 None:intergenic 25.0%
! TAAACTCTGGTAAAAAATAG+TGG - chr7_2:10641316-10641335 Msa1048760:CDS 25.0%
!!! CTTTTTTCAATTAAGACTAC+AGG - chr7_2:10641513-10641532 Msa1048760:intron 25.0%
!!! TTTTTCAATTAAGACTACAG+GGG - chr7_2:10641515-10641534 Msa1048760:intron 25.0%
!!! CTCTAAGTCATTTTCAAAAT+TGG - chr7_2:10641926-10641945 Msa1048760:intron 25.0%
!!! GACTATGTGTTTGTTTTTTA+CGG - chr7_2:10641980-10641999 Msa1048760:intron 25.0%
! GTTGAATGAATACACAAAAT+AGG - chr7_2:10642196-10642215 Msa1048760:intron 25.0%
! TTAGATCTACATTGTTTAGT+TGG + chr7_2:10642407-10642426 None:intergenic 25.0%
!!! TTCATTTTTGCTATCCATAA+TGG - chr7_2:10642599-10642618 Msa1048760:intron 25.0%
!!! TCATTTTTGCTATCCATAAT+GGG - chr7_2:10642600-10642619 Msa1048760:intron 25.0%
! AAGAACTATATAATAGCAAG+AGG + chr7_2:10642764-10642783 None:intergenic 25.0%
!!! TTTAACTTTTGAAATTCCAC+AGG - chr7_2:10642790-10642809 Msa1048760:intron 25.0%
! ATTCAAAGCTATTGGATAAA+TGG + chr7_2:10642895-10642914 None:intergenic 25.0%
!! ATTTTGTGATTCAAAGCTAT+TGG + chr7_2:10642903-10642922 None:intergenic 25.0%
!!! TTTTTTCCCTTGTTTCTTTT+AGG - chr7_2:10643012-10643031 Msa1048760:intron 25.0%
!!! TTTTTTGGAAAGTATAGACA+AGG - chr7_2:10643051-10643070 Msa1048760:intron 25.0%
! ATCACAAAATTTATACAGGT+AGG - chr7_2:10643488-10643507 Msa1048760:intron 25.0%
! TTGTTTGATAAGAAGTGAAA+AGG + chr7_2:10643650-10643669 None:intergenic 25.0%
! ACCAAAAACTCTTACTAAAA+GGG + chr7_2:10643736-10643755 None:intergenic 25.0%
! AACCAAAAACTCTTACTAAA+AGG + chr7_2:10643737-10643756 None:intergenic 25.0%
!!! CTGTTTTAGATTTAGCTTAT+GGG - chr7_2:10643889-10643908 Msa1048760:intron 25.0%
! AATTGAAATTGCACAAGAAA+TGG - chr7_2:10644015-10644034 Msa1048760:intron 25.0%
!!! AGGTTTGTTTTACTATACAA+AGG - chr7_2:10644056-10644075 Msa1048760:intron 25.0%
!!! CTGTTTTAGATTTAGCTTAT+GGG - chr7_2:10643889-10643908 Msa1048760:intron 25.0%
!! TGTGCATATTTATGTTTTAC+TGG - chr7_2:10644363-10644382 Msa1048760:intron 25.0%
! ACTTTAAGTCAACATAAACT+TGG + chr7_2:10644536-10644555 None:intergenic 25.0%
! ATGCCAAAAAATAATAGTTC+TGG - chr7_2:10644731-10644750 Msa1048760:CDS 25.0%
!!! TCTCCAGAACTATTATTTTT+TGG + chr7_2:10644737-10644756 None:intergenic 25.0%
!! ATATTTAATTGACTTTGGCA+TGG + chr7_2:10645022-10645041 None:intergenic 25.0%
! AAAGTCAACCAATTCAAAAT+TGG + chr7_2:10645109-10645128 None:intergenic 25.0%
! GATAAGTAATTCTTGTCATT+TGG - chr7_2:10645463-10645482 Msa1048760:CDS 25.0%
! GTAAATCAACACAACATATT+TGG + chr7_2:10645545-10645564 None:intergenic 25.0%
! ATAAGCAAACATATTTGCAT+TGG + chr7_2:10645608-10645627 None:intergenic 25.0%
! AACAATAGTAATTTACCTAG+CGG + chr7_2:10645800-10645819 None:intergenic 25.0%
! TGTATTATAAGAGGAGAAAA+TGG - chr7_2:10645874-10645893 Msa1048760:intron 25.0%
! GATAAGTAATTCTTGTCATT+TGG + chr7_2:10645463-10645482 None:intergenic 25.0%
! TATGATTCTTATCTTCCAAA+AGG - chr7_2:10646287-10646306 Msa1048760:intron 25.0%
!!! TTTCCTTTTTTTTTTTGCTG+AGG - chr7_2:10646751-10646770 Msa1048760:intron 25.0%
!! TACTTCTTTTACCATTTTAC+TGG - chr7_2:10646962-10646981 Msa1048760:intron 25.0%
!!! TTTTACCATTTTACTGGTTT+TGG - chr7_2:10646968-10646987 Msa1048760:intron 25.0%
!!! ATATTTGGTATTGACTATCA+TGG - chr7_2:10647052-10647071 Msa1048760:intron 25.0%
!! TACCTGTTTTCATATTATTC+TGG - chr7_2:10647134-10647153 Msa1048760:intron 25.0%
! AACCAGAATAATATGAAAAC+AGG + chr7_2:10647139-10647158 None:intergenic 25.0%
! AGCATACAAAAGTAAGTAAT+AGG + chr7_2:10647175-10647194 None:intergenic 25.0%
! ATTGTAATTAATCTGAACAG+GGG + chr7_2:10647607-10647626 None:intergenic 25.0%
AACAACAACCAATTCTTCTT+CGG + chr7_2:10640412-10640431 None:intergenic 30.0%
TTCATTTGATTAAGCTCGTT+TGG - chr7_2:10640578-10640597 Msa1048760:CDS 30.0%
TAATAACACGCTATGAAGTA+CGG + chr7_2:10640985-10641004 None:intergenic 30.0%
TAACAGACATGATGAAAAGA+AGG - chr7_2:10641030-10641049 Msa1048760:CDS 30.0%
!! TGGTAAAAAATAGTGGATAC+TGG - chr7_2:10641323-10641342 Msa1048760:CDS 30.0%
AACTTTAAGTCATCCACTAT+AGG + chr7_2:10641380-10641399 None:intergenic 30.0%
! GACTTAAAGTTAGCTTATAG+CGG - chr7_2:10641389-10641408 Msa1048760:CDS 30.0%
!! AAGACACATTTTTGAGCTTA+TGG + chr7_2:10641701-10641720 None:intergenic 30.0%
GGATTCTTATTGTCAATCTT+GGG - chr7_2:10641771-10641790 Msa1048760:intron 30.0%
GATTCTTATTGTCAATCTTG+GGG - chr7_2:10641772-10641791 Msa1048760:intron 30.0%
ATTCTTATTGTCAATCTTGG+GGG - chr7_2:10641773-10641792 Msa1048760:intron 30.0%
TTTACTCCTCAATTATACGT+TGG - chr7_2:10641879-10641898 Msa1048760:intron 30.0%
AACACATAGTCCAAAACAAT+TGG + chr7_2:10641971-10641990 None:intergenic 30.0%
ATGAGATACGAATATTAGGA+TGG - chr7_2:10642174-10642193 Msa1048760:intron 30.0%
TACACAAAATAGGATTATGC+TGG - chr7_2:10642206-10642225 Msa1048760:intron 30.0%
GATCTAGTGAATTCTTAATG+AGG + chr7_2:10642330-10642349 None:intergenic 30.0%
TAAGAATTCACTAGATCACA+TGG - chr7_2:10642333-10642352 Msa1048760:intron 30.0%
TGACCTTACTAAATGGAAAA+TGG - chr7_2:10642491-10642510 Msa1048760:intron 30.0%
!! AAGCCATTTTCCATTTAGTA+AGG + chr7_2:10642497-10642516 None:intergenic 30.0%
! CTAAATGGAAAATGGCTTTA+TGG - chr7_2:10642499-10642518 Msa1048760:intron 30.0%
AAAGAAACAAGGGAAAAAGA+AGG + chr7_2:10642636-10642655 None:intergenic 30.0%
!! CTTTTTCCCTTGTTTCTTTA+AGG - chr7_2:10642637-10642656 Msa1048760:intron 30.0%
TGAACTCCTTAAAGAAACAA+GGG + chr7_2:10642646-10642665 None:intergenic 30.0%
TTGAACTCCTTAAAGAAACA+AGG + chr7_2:10642647-10642666 None:intergenic 30.0%
! CTTTAAGGAGTTCAATTTGA+AGG - chr7_2:10642652-10642671 Msa1048760:intron 30.0%
! GTTCAATTTGAAGGATCTTT+TGG - chr7_2:10642661-10642680 Msa1048760:intron 30.0%
ATATGAGTTCGAAAACCTAA+TGG - chr7_2:10642691-10642710 Msa1048760:intron 30.0%
AAGTTTATCACCTTCTCATT+TGG + chr7_2:10642848-10642867 None:intergenic 30.0%
TTGAATCACAAAATTTGTGC+AGG - chr7_2:10642909-10642928 Msa1048760:intron 30.0%
!! TTCCTTTTTGTTATCGACAA+TGG - chr7_2:10642973-10642992 Msa1048760:intron 30.0%
!! TCCTTTTTGTTATCGACAAT+GGG - chr7_2:10642974-10642993 Msa1048760:intron 30.0%
AAGAAACAAGGGAAAAAAGA+AGG + chr7_2:10643010-10643029 None:intergenic 30.0%
TGAACTCCTAAAAGAAACAA+GGG + chr7_2:10643021-10643040 None:intergenic 30.0%
TTGAACTCCTAAAAGAAACA+AGG + chr7_2:10643022-10643041 None:intergenic 30.0%
AAGAAGGCTGATATAAAGAT+CGG + chr7_2:10643123-10643142 None:intergenic 30.0%
GGAATTTCAAACTTCTCATT+TGG + chr7_2:10643292-10643311 None:intergenic 30.0%
CCAAAAACTCTTACTAAAAG+GGG + chr7_2:10643735-10643754 None:intergenic 30.0%
! TAAGCTAAATCTAAAACAGC+AGG + chr7_2:10643888-10643907 None:intergenic 30.0%
!! GCTGTTTTAGATTTAGCTTA+TGG - chr7_2:10643888-10643907 Msa1048760:intron 30.0%
!! TTCTTTAGAATCATTGGCTT+CGG + chr7_2:10643963-10643982 None:intergenic 30.0%
! AAGCCAATGATTCTAAAGAA+AGG - chr7_2:10643963-10643982 Msa1048760:intron 30.0%
!! AGTCCTTTCTTTAGAATCAT+TGG + chr7_2:10643969-10643988 None:intergenic 30.0%
! TAAGCTAAATCTAAAACAGC+AGG + chr7_2:10643888-10643907 None:intergenic 30.0%
!! GCTGTTTTAGATTTAGCTTA+TGG - chr7_2:10643888-10643907 Msa1048760:intron 30.0%
!! AGTCCTTTCTTTAGAATCAT+CGG + chr7_2:10643969-10643988 None:intergenic 30.0%
! TTTATATGTCATGCTGATTG+TGG - chr7_2:10644605-10644624 Msa1048760:intron 30.0%
GAGAATGATTGCTTGTAATA+GGG - chr7_2:10644753-10644772 Msa1048760:CDS 30.0%
TAATAGGGATCCTGTAAAAT+AGG - chr7_2:10644768-10644787 Msa1048760:CDS 30.0%
AATAGGGATCCTGTAAAATA+GGG - chr7_2:10644769-10644788 Msa1048760:CDS 30.0%
AAACTCGTAAAAACTGTTTC+AGG + chr7_2:10644982-10645001 None:intergenic 30.0%
! TGAAACAGTTTTTACGAGTT+TGG - chr7_2:10644981-10645000 Msa1048760:intron 30.0%
AGGATGACTTATTTATCTTG+AGG - chr7_2:10645081-10645100 Msa1048760:intron 30.0%
TATTCACTTTCTATGAAGAG+AGG - chr7_2:10645199-10645218 Msa1048760:intron 30.0%
CTCAATAAAGAACTAGATAG+AGG + chr7_2:10645435-10645454 None:intergenic 30.0%
ACTAACACTCACTCATTTAT+TGG - chr7_2:10645964-10645983 Msa1048760:intron 30.0%
CTAACACTCACTCATTTATT+GGG - chr7_2:10645965-10645984 Msa1048760:intron 30.0%
!!! TTTTAGTTAAGAGGAGTGTT+AGG + chr7_2:10646060-10646079 None:intergenic 30.0%
GTAAATCAACGCAACATATT+TGG - chr7_2:10646104-10646123 Msa1048760:intron 30.0%
CTGAATAAAGAACTAGATAG+AGG - chr7_2:10646214-10646233 Msa1048760:intron 30.0%
!! ATGATTTGTATGAGACCTTT+TGG + chr7_2:10646305-10646324 None:intergenic 30.0%
TATAATACTACGTATCAACC+TGG - chr7_2:10646532-10646551 Msa1048760:intron 30.0%
TCACCTCAGCAAAAAAAAAA+AGG + chr7_2:10646757-10646776 None:intergenic 30.0%
!! TTGTTTTGTCACTTGACATT+TGG - chr7_2:10646900-10646919 Msa1048760:intron 30.0%
TGTTATTCAAATCCGATTGA+AGG + chr7_2:10647004-10647023 None:intergenic 30.0%
GCATATGATTGATTATGAGA+GGG + chr7_2:10647351-10647370 None:intergenic 30.0%
TGCATATGATTGATTATGAG+AGG + chr7_2:10647352-10647371 None:intergenic 30.0%
TGTTGAGGATAATTTCCATA+AGG + chr7_2:10647381-10647400 None:intergenic 30.0%
TGGAAATTATCCTCAACATA+TGG - chr7_2:10647383-10647402 Msa1048760:intron 30.0%
TTGAATTTCACCCCTACTTA+TGG - chr7_2:10640386-10640405 Msa1048760:CDS 35.0%
GATGATAACCAGAATTACCT+AGG - chr7_2:10640516-10640535 Msa1048760:CDS 35.0%
ATGTTGTACCTAGGTAATTC+TGG + chr7_2:10640527-10640546 None:intergenic 35.0%
TTATCTATGAACCAGAGTCA+TGG - chr7_2:10640804-10640823 Msa1048760:CDS 35.0%
GTAATCATATGTGTCAGTGT+CGG - chr7_2:10640902-10640921 Msa1048760:CDS 35.0%
TAATCATATGTGTCAGTGTC+GGG - chr7_2:10640903-10640922 Msa1048760:CDS 35.0%
!! AGAATCTCTTTGGTATTGGT+AGG + chr7_2:10641133-10641152 None:intergenic 35.0%
AACGAGAATCTCTTTGGTAT+TGG + chr7_2:10641137-10641156 None:intergenic 35.0%
!! AGAAGAAGTATCATGCTGAA+AGG + chr7_2:10641212-10641231 None:intergenic 35.0%
TTTCAGCATGATACTTCTTC+TGG - chr7_2:10641211-10641230 Msa1048760:CDS 35.0%
AACAACCACACAAGAAATTG+AGG - chr7_2:10641264-10641283 Msa1048760:CDS 35.0%
AATTGAGGTTCCTAGCAATA+AGG - chr7_2:10641279-10641298 Msa1048760:CDS 35.0%
GATGTACATACCTTATTGCT+AGG + chr7_2:10641292-10641311 None:intergenic 35.0%
ATGTACATCCTCTTAAACTC+TGG - chr7_2:10641303-10641322 Msa1048760:CDS 35.0%
ATGACTAAAATAGACCCGTT+TGG + chr7_2:10641650-10641669 None:intergenic 35.0%
CGGATTCTTATTGTCAATCT+TGG - chr7_2:10641770-10641789 Msa1048760:intron 35.0%
AGACATCCAACGTATAATTG+AGG + chr7_2:10641888-10641907 None:intergenic 35.0%
CAATTGGTATGATGCAGTTT+AGG + chr7_2:10641955-10641974 None:intergenic 35.0%
! CTGCATCATACCAATTGTTT+TGG - chr7_2:10641958-10641977 Msa1048760:intron 35.0%
! CTATAACACGTGCATTTTTG+TGG + chr7_2:10642026-10642045 None:intergenic 35.0%
!! ACTTGTTTTCTCCTGCTTAA+TGG - chr7_2:10642090-10642109 Msa1048760:intron 35.0%
GATGATAGACTCAATTGACA+GGG - chr7_2:10642151-10642170 Msa1048760:intron 35.0%
AGGGATGAGATACGAATATT+AGG - chr7_2:10642170-10642189 Msa1048760:intron 35.0%
ATTACACTAGAGAGGAAGTT+GGG - chr7_2:10642229-10642248 Msa1048760:intron 35.0%
CATGGATGATAGTCTAATAG+AGG - chr7_2:10642351-10642370 Msa1048760:intron 35.0%
GATGATAGTCTAATAGAGGT+AGG - chr7_2:10642355-10642374 Msa1048760:intron 35.0%
!! ACGTTGATGACCTTACTAAA+TGG - chr7_2:10642484-10642503 Msa1048760:intron 35.0%
AGGAAAATGATCACCCATTA+TGG + chr7_2:10642616-10642635 None:intergenic 35.0%
ACCCATTGTCGATAACAAAA+AGG + chr7_2:10642978-10642997 None:intergenic 35.0%
GCTGATATAAAGATCGGATA+TGG + chr7_2:10643117-10643136 None:intergenic 35.0%
ATAGCAAGAGAAGAACAAGA+AGG + chr7_2:10643139-10643158 None:intergenic 35.0%
! TGAGAAGTTTGAAATTCCAC+AGG - chr7_2:10643294-10643313 Msa1048760:intron 35.0%
CAGTTTCTCACTTTCTCATT+TGG + chr7_2:10643409-10643428 None:intergenic 35.0%
GATTAATCATTGCGAAGAGT+GGG - chr7_2:10643510-10643529 Msa1048760:intron 35.0%
AAGGGGATAATGATCAACAA+AGG + chr7_2:10643718-10643737 None:intergenic 35.0%
! CCCCTTTTAGTAAGAGTTTT+TGG - chr7_2:10643732-10643751 Msa1048760:intron 35.0%
!! TCTTTAGAATCATTGGCTTC+GGG + chr7_2:10643962-10643981 None:intergenic 35.0%
TTCAATTTGCCTCTTATCAG+CGG + chr7_2:10644002-10644021 None:intergenic 35.0%
AATTGCACAAGAAATGGCAA+AGG - chr7_2:10644021-10644040 Msa1048760:intron 35.0%
AGTAAAACAAACCTGACTCA+AGG + chr7_2:10644050-10644069 None:intergenic 35.0%
!! TTCTTTAGAATCATCGGCTT+CGG + chr7_2:10644205-10644224 None:intergenic 35.0%
! AAGCCGATGATTCTAAAGAA+AGG - chr7_2:10644205-10644224 Msa1048760:intron 35.0%
AATTGCACAGGAAATGACAA+AGG - chr7_2:10644263-10644282 Msa1048760:intron 35.0%
! GTGCTGATAAAGTTTGCAAT+TGG - chr7_2:10644323-10644342 Msa1048760:intron 35.0%
CATAGAAAAGAAGCTGAAGT+TGG + chr7_2:10644574-10644593 None:intergenic 35.0%
! CAACTTCAGCTTCTTTTCTA+TGG - chr7_2:10644572-10644591 Msa1048760:intron 35.0%
! TTCTTTTCTATGGTAGACTG+AGG - chr7_2:10644582-10644601 Msa1048760:intron 35.0%
GGAGAATGATTGCTTGTAAT+AGG - chr7_2:10644752-10644771 Msa1048760:CDS 35.0%
ATCCTGTAAAATAGGGATCT+AGG - chr7_2:10644776-10644795 Msa1048760:intron 35.0%
GCATGCATAAAATAGAGATC+TGG - chr7_2:10644816-10644835 Msa1048760:intron 35.0%
! TTCATATGCCTGCTCTAAAT+TGG - chr7_2:10644847-10644866 Msa1048760:intron 35.0%
ACAAATCGTGATTGTGTGTA+TGG - chr7_2:10644907-10644926 Msa1048760:intron 35.0%
GTAAAACCAAGATGACAGTT+AGG - chr7_2:10645061-10645080 Msa1048760:intron 35.0%
!! TTGAGGTGCCAATTTTGAAT+TGG - chr7_2:10645098-10645117 Msa1048760:intron 35.0%
TCAGTAAGACTATATTGTGC+CGG - chr7_2:10645295-10645314 Msa1048760:intron 35.0%
TCAACACAACATATTTGGAC+TGG + chr7_2:10645540-10645559 None:intergenic 35.0%
TCAAAGATAAGTCAGAAAGC+AGG + chr7_2:10645567-10645586 None:intergenic 35.0%
CTTTGACCTGATGTCAATAA+AGG - chr7_2:10645581-10645600 Msa1048760:intron 35.0%
ATTGGTCCTTTATTGACATC+AGG + chr7_2:10645590-10645609 None:intergenic 35.0%
TTTGACCTGATGATACACTT+GGG - chr7_2:10645649-10645668 Msa1048760:CDS 35.0%
AAAAACCCAAGTGTATCATC+AGG + chr7_2:10645657-10645676 None:intergenic 35.0%
! CCAACACTCACTCTTTTATT+GGG + chr7_2:10646015-10646034 None:intergenic 35.0%
! TCCAACACTCACTCTTTTAT+TGG + chr7_2:10646016-10646035 None:intergenic 35.0%
TTTACCTGCTTTCCAACATA+GGG + chr7_2:10646089-10646108 None:intergenic 35.0%
ATTTACCTGCTTTCCAACAT+AGG + chr7_2:10646090-10646109 None:intergenic 35.0%
TCAGTAAGATTGTATTGTGC+TGG + chr7_2:10646354-10646373 None:intergenic 35.0%
ATTGTAGGATGCTTAATGGT+TGG + chr7_2:10646407-10646426 None:intergenic 35.0%
ACCATTAAGCATCCTACAAT+TGG - chr7_2:10646407-10646426 Msa1048760:intron 35.0%
TCCAATTGTAGGATGCTTAA+TGG + chr7_2:10646411-10646430 None:intergenic 35.0%
ATTAAGCATCCTACAATTGG+AGG - chr7_2:10646410-10646429 Msa1048760:intron 35.0%
GCATTAAAACCTCCAATTGT+AGG + chr7_2:10646422-10646441 None:intergenic 35.0%
TGCTATATCAAGAAAGCGAA+TGG - chr7_2:10646484-10646503 Msa1048760:intron 35.0%
AATAAAGTGAAAGCTGAACC+AGG + chr7_2:10646553-10646572 None:intergenic 35.0%
CAACGATAACTAGACAAAGA+TGG + chr7_2:10646650-10646669 None:intergenic 35.0%
!!! AATTTTGCTGTTGCATTGTC+AGG - chr7_2:10646718-10646737 Msa1048760:intron 35.0%
!! GTTGAGCTCTAAGATGATAA+TGG - chr7_2:10646836-10646855 Msa1048760:intron 35.0%
!!! TACCATTTTACTGGTTTTGG+AGG - chr7_2:10646971-10646990 Msa1048760:intron 35.0%
TCACAATTAAATGAGTGCTC+AGG - chr7_2:10647024-10647043 Msa1048760:intron 35.0%
CACAATTAAATGAGTGCTCA+GGG - chr7_2:10647025-10647044 Msa1048760:intron 35.0%
AGTGCTCAGGGTTTAATATT+TGG - chr7_2:10647037-10647056 Msa1048760:intron 35.0%
GCTGATAGTAATATGATGGT+GGG + chr7_2:10647314-10647333 None:intergenic 35.0%
TGCTGATAGTAATATGATGG+TGG + chr7_2:10647315-10647334 None:intergenic 35.0%
CGATGCTGATAGTAATATGA+TGG + chr7_2:10647318-10647337 None:intergenic 35.0%
GATTGATTATGAGAGGGATA+TGG + chr7_2:10647345-10647364 None:intergenic 35.0%
GGATAATTTCCATAAGGAGT+AGG + chr7_2:10647375-10647394 None:intergenic 35.0%
AACAGGGGTTATGATCATTA+TGG - chr7_2:10647477-10647496 Msa1048760:CDS 35.0%
!! ATGATCATTATGGTGGACAA+AGG - chr7_2:10647487-10647506 Msa1048760:CDS 35.0%
!! TGATCATTATGGTGGACAAA+GGG - chr7_2:10647488-10647507 Msa1048760:CDS 35.0%
TAATTAATCTGAACAGGGGA+TGG + chr7_2:10647603-10647622 None:intergenic 35.0%
TTCTTCTTCGGCCATAAGTA+GGG + chr7_2:10640400-10640419 None:intergenic 40.0%
ATTCTTCTTCGGCCATAAGT+AGG + chr7_2:10640401-10640420 None:intergenic 40.0%
ACTTATGGCCGAAGAAGAAT+TGG - chr7_2:10640401-10640420 Msa1048760:CDS 40.0%
AACTTGCGCTTACAATCAGA+GGG + chr7_2:10640447-10640466 None:intergenic 40.0%
GAAGATCAACACTCTGATGA+CGG - chr7_2:10640468-10640487 Msa1048760:CDS 40.0%
TGGTTATCATCGTCAAGACA+AGG + chr7_2:10640507-10640526 None:intergenic 40.0%
ACACGATAAGTAACCGACAT+CGG - chr7_2:10640936-10640955 Msa1048760:CDS 40.0%
TACCAAAGAGATTCTCGTTG+AGG - chr7_2:10641138-10641157 Msa1048760:CDS 40.0%
! GAAGTATCATGCTGAAAGGT+GGG + chr7_2:10641208-10641227 None:intergenic 40.0%
!! AGAAGTATCATGCTGAAAGG+TGG + chr7_2:10641209-10641228 None:intergenic 40.0%
GACAAAAGCAACCTATATCC+AGG - chr7_2:10641233-10641252 Msa1048760:CDS 40.0%
AGGAACCTCAATTTCTTGTG+TGG + chr7_2:10641272-10641291 None:intergenic 40.0%
GTAAATGACCTGTTGCCAAA+CGG - chr7_2:10641632-10641651 Msa1048760:intron 40.0%
TAAATGACCTGTTGCCAAAC+GGG - chr7_2:10641633-10641652 Msa1048760:intron 40.0%
TAACACGTATCCAAGCCTAA+GGG + chr7_2:10641734-10641753 None:intergenic 40.0%
ATAACACGTATCCAAGCCTA+AGG + chr7_2:10641735-10641754 None:intergenic 40.0%
TAGGCTTGGATACGTGTTAT+TGG - chr7_2:10641735-10641754 Msa1048760:intron 40.0%
! AGGCTTGGATACGTGTTATT+GGG - chr7_2:10641736-10641755 Msa1048760:intron 40.0%
GTTATTGGGCTCAATCATGT+CGG - chr7_2:10641750-10641769 Msa1048760:intron 40.0%
CACATATTTCCTCTCTGCAA+TGG - chr7_2:10641848-10641867 Msa1048760:intron 40.0%
ACAAACAAACCATTGCAGAG+AGG + chr7_2:10641860-10641879 None:intergenic 40.0%
TGTCTGCTCATATGTTGTGA+CGG - chr7_2:10641903-10641922 Msa1048760:intron 40.0%
AGTAGCTGTTACCATTAAGC+AGG + chr7_2:10642104-10642123 None:intergenic 40.0%
GGATGATAGACTCAATTGAC+AGG - chr7_2:10642150-10642169 Msa1048760:intron 40.0%
TATGCTGGATTACACTAGAG+AGG - chr7_2:10642221-10642240 Msa1048760:intron 40.0%
GATTACACTAGAGAGGAAGT+TGG - chr7_2:10642228-10642247 Msa1048760:intron 40.0%
TTACACTAGAGAGGAAGTTG+GGG - chr7_2:10642230-10642249 Msa1048760:intron 40.0%
TGGATTCTACTTGGGTGATT+TGG - chr7_2:10642278-10642297 Msa1048760:intron 40.0%
TAGGTTGTAGACCTGCAAAA+GGG + chr7_2:10642549-10642568 None:intergenic 40.0%
GTATCTAACCTCTGTGAACA+TGG + chr7_2:10642720-10642739 None:intergenic 40.0%
GCTGAGATAAAGATCGGATA+TGG + chr7_2:10642742-10642761 None:intergenic 40.0%
CAAGAGGCTGAGATAAAGAT+CGG + chr7_2:10642748-10642767 None:intergenic 40.0%
ACGTGAAGTTCCAAATGAGA+AGG - chr7_2:10642835-10642854 Msa1048760:intron 40.0%
AGACAAGGCAGAAAAGCTAT+TGG - chr7_2:10643066-10643085 Msa1048760:intron 40.0%
GAAATTTCACAGGACGATGA+TGG - chr7_2:10643187-10643206 Msa1048760:intron 40.0%
GGATTAATCATTGCGAAGAG+TGG - chr7_2:10643509-10643528 Msa1048760:intron 40.0%
GGGGAGAAGTTATTTGAGAA+TGG + chr7_2:10643590-10643609 None:intergenic 40.0%
CTCATGTGATTGAGGAGATT+AGG + chr7_2:10643774-10643793 None:intergenic 40.0%
TACAGCAACTCATGTGATTG+AGG + chr7_2:10643782-10643801 None:intergenic 40.0%
!! TCTTTAGAATCATCGGCTTC+GGG + chr7_2:10644204-10644223 None:intergenic 40.0%
TCCAAGTTACTGGTGATAAG+AGG - chr7_2:10644232-10644251 Msa1048760:intron 40.0%
GAGGCAAATTGAAATTGCAC+AGG - chr7_2:10644009-10644028 Msa1048760:intron 40.0%
AGTCAAACAAACCTGACTCA+AGG + chr7_2:10644292-10644311 None:intergenic 40.0%
AGCTGAAGTTGGCACATATA+TGG + chr7_2:10644563-10644582 None:intergenic 40.0%
! ATATGTCATGCTGATTGTGG+AGG - chr7_2:10644608-10644627 Msa1048760:intron 40.0%
! TGCCTAGATCCCTATTTTAC+AGG + chr7_2:10644781-10644800 None:intergenic 40.0%
! ACACTGAACCAATTTAGAGC+AGG + chr7_2:10644858-10644877 None:intergenic 40.0%
AGTCATCCTAACTGTCATCT+TGG + chr7_2:10645070-10645089 None:intergenic 40.0%
!!! TTTGACCGTTGACTTTTCCA+TGG - chr7_2:10645140-10645159 Msa1048760:intron 40.0%
!!! TTGACCGTTGACTTTTCCAT+GGG - chr7_2:10645141-10645160 Msa1048760:intron 40.0%
!! TGCAATTGGGGTTTTAATGC+CGG + chr7_2:10645227-10645246 None:intergenic 40.0%
CATTAAGCATCCTGCAATTG+GGG + chr7_2:10645239-10645258 None:intergenic 40.0%
CCATTAAGCATCCTGCAATT+GGG + chr7_2:10645240-10645259 None:intergenic 40.0%
ACCATTAAGCATCCTGCAAT+TGG + chr7_2:10645241-10645260 None:intergenic 40.0%
ATTGCAGGATGCTTAATGGT+TGG - chr7_2:10645241-10645260 Msa1048760:intron 40.0%
TGGAAGATAAGAGTCATACC+TGG - chr7_2:10645364-10645383 Msa1048760:CDS 40.0%
!! AACATATTTGGACTGGTTCC+GGG + chr7_2:10646116-10646135 None:intergenic 40.0%
!! CAACATATTTGGACTGGTTC+CGG + chr7_2:10646115-10646134 None:intergenic 40.0%
CTTTGACCTGATGATACACT+TGG - chr7_2:10645648-10645667 Msa1048760:CDS 40.0%
ACACATGAATAGAAGGCAAG+AGG - chr7_2:10645761-10645780 Msa1048760:intron 40.0%
CACATGAATAGAAGGCAAGA+GGG - chr7_2:10645762-10645781 Msa1048760:intron 40.0%
ACACTCACTCATTTATTGGG+TGG - chr7_2:10645968-10645987 Msa1048760:intron 40.0%
CCCAATAAAAGAGTGAGTGT+TGG - chr7_2:10646012-10646031 Msa1048760:CDS 40.0%
TTACCTGCTTTCCAACATAG+GGG + chr7_2:10646088-10646107 None:intergenic 40.0%
TCAACGCAACATATTTGGAC+TGG - chr7_2:10646109-10646128 Msa1048760:intron 40.0%
!! CAACATATTTGGACTGGTTC+CGG - chr7_2:10646115-10646134 Msa1048760:intron 40.0%
ATTAAGGTAGCCATGAGATC+CGG + chr7_2:10646137-10646156 None:intergenic 40.0%
! AGATTGTATTGTGCTGGCAT+TGG + chr7_2:10646348-10646367 None:intergenic 40.0%
ACTTAGAAGAGGTGACAGAT+TGG + chr7_2:10646623-10646642 None:intergenic 40.0%
AAGATGGCGAAACTTAGAAG+AGG + chr7_2:10646634-10646653 None:intergenic 40.0%
!! AGCTCTAAGATGATAATGGC+AGG - chr7_2:10646840-10646859 Msa1048760:intron 40.0%
CTCCTCCAAAACCAGTAAAA+TGG + chr7_2:10646976-10646995 None:intergenic 40.0%
!! GTATTGACTATCATGGCAAC+TGG - chr7_2:10647059-10647078 Msa1048760:intron 40.0%
!! CTTACTTTTGTATGCTGTGC+TGG - chr7_2:10647179-10647198 Msa1048760:intron 40.0%
!! GATAGTAATATGATGGTGGG+TGG + chr7_2:10647311-10647330 None:intergenic 40.0%
CATATTACTATCAGCATCGC+TGG - chr7_2:10647319-10647338 Msa1048760:intron 40.0%
TCATATGCACCTACTCCTTA+TGG - chr7_2:10647363-10647382 Msa1048760:intron 40.0%
AGGGGTTATGATCATTATGG+TGG - chr7_2:10647480-10647499 Msa1048760:CDS 40.0%
!! GATCATTATGGTGGACAAAG+GGG - chr7_2:10647489-10647508 Msa1048760:CDS 40.0%
CTTATGGAGGGTAAAGGATA+AGG + chr7_2:10647579-10647598 None:intergenic 40.0%
TCCATATGGATATTGTGCAG+GGG + chr7_2:10647643-10647662 None:intergenic 40.0%
CTCCATATGGATATTGTGCA+GGG + chr7_2:10647644-10647663 None:intergenic 40.0%
TATGGAAAGCCACCATTGTA+TGG - chr7_2:10647720-10647739 Msa1048760:intron 40.0%
TCTACTCCAGCACAATCATA+TGG - chr7_2:10647825-10647844 Msa1048760:intron 40.0%
TGTACTCCAGCACAATCATA+TGG - chr7_2:10647948-10647967 Msa1048760:intron 40.0%
AAGGACAACATCCAGTCTTA+TGG - chr7_2:10648336-10648355 Msa1048760:five_prime_UTR 40.0%
TCTTCTTCGGCCATAAGTAG+GGG + chr7_2:10640399-10640418 None:intergenic 45.0%
GAACTTGCGCTTACAATCAG+AGG + chr7_2:10640448-10640467 None:intergenic 45.0%
CACGATAAGTAACCGACATC+GGG - chr7_2:10640937-10640956 Msa1048760:CDS 45.0%
GCCAGAGGAAAATGCTCATT+CGG - chr7_2:10641060-10641079 Msa1048760:CDS 45.0%
! TCCGAATGAGCATTTTCCTC+TGG + chr7_2:10641064-10641083 None:intergenic 45.0%
AGAGGAAAATGCTCATTCGG+AGG - chr7_2:10641063-10641082 Msa1048760:CDS 45.0%
CTCCTCAACGAGAATCTCTT+TGG + chr7_2:10641143-10641162 None:intergenic 45.0%
GTTGTGTCAGACCTGGATAT+AGG + chr7_2:10641247-10641266 None:intergenic 45.0%
!! TAGCTGCTAGGCTAGTCTAT+AGG - chr7_2:10641347-10641366 Msa1048760:CDS 45.0%
!! AGCTGCTAGGCTAGTCTATA+GGG - chr7_2:10641348-10641367 Msa1048760:CDS 45.0%
TATAGGGGATGGACCTATAG+TGG - chr7_2:10641364-10641383 Msa1048760:CDS 45.0%
AAATAGACCCGTTTGGCAAC+AGG + chr7_2:10641643-10641662 None:intergenic 45.0%
ACCACACGAGTAAGCATGAT+AGG - chr7_2:10642129-10642148 Msa1048760:intron 45.0%
TCCTATCATGCTTACTCGTG+TGG + chr7_2:10642133-10642152 None:intergenic 45.0%
!! TTGGGTGATTTGGTCATGTG+CGG - chr7_2:10642288-10642307 Msa1048760:intron 45.0%
! AGCTTAAAACCCCCTTTTGC+AGG - chr7_2:10642535-10642554 Msa1048760:intron 45.0%
AGGTTGTAGACCTGCAAAAG+GGG + chr7_2:10642548-10642567 None:intergenic 45.0%
CTAGGTTGTAGACCTGCAAA+AGG + chr7_2:10642550-10642569 None:intergenic 45.0%
CTGTGAACATGGCATCCATT+AGG + chr7_2:10642709-10642728 None:intergenic 45.0%
AATGGATGCCATGTTCACAG+AGG - chr7_2:10642709-10642728 Msa1048760:intron 45.0%
! TCATTTGGAACTTCACGTGC+AGG + chr7_2:10642833-10642852 None:intergenic 45.0%
GTATCTAACCTCTGCACTCA+TGG + chr7_2:10643095-10643114 None:intergenic 45.0%
! ATTTCACAGGACGATGATGG+AGG - chr7_2:10643190-10643209 Msa1048760:intron 45.0%
AGGTCTTGAGCTACAAATGC+AGG + chr7_2:10643220-10643239 None:intergenic 45.0%
TCCAAGTTACCGCTGATAAG+AGG - chr7_2:10643990-10644009 Msa1048760:intron 45.0%
GAAAGGACTGTCCAAGTTAC+TGG - chr7_2:10643980-10643999 Msa1048760:intron 45.0%
GCCTCTTATCACCAGTAACT+TGG + chr7_2:10644236-10644255 None:intergenic 45.0%
! ATGCTGATTGTGGAGGTGAT+CGG - chr7_2:10644615-10644634 Msa1048760:intron 45.0%
GGTGATCTATCTCACTTGCA+TGG + chr7_2:10644961-10644980 None:intergenic 45.0%
!!! TGACCGTTGACTTTTCCATG+GGG - chr7_2:10645142-10645161 Msa1048760:intron 45.0%
TGACCCCATGGAAAAGTCAA+CGG + chr7_2:10645148-10645167 None:intergenic 45.0%
CTTTCTATGAAGAGAGGTCC+CGG - chr7_2:10645205-10645224 Msa1048760:intron 45.0%
!! GCAATTGGGGTTTTAATGCC+GGG + chr7_2:10645226-10645245 None:intergenic 45.0%
GGCATTAAAACCCCAATTGC+AGG - chr7_2:10645226-10645245 Msa1048760:intron 45.0%
CCCAATTGCAGGATGCTTAA+TGG - chr7_2:10645237-10645256 Msa1048760:intron 45.0%
! AGACTATATTGTGCCGGCAT+TGG - chr7_2:10645301-10645320 Msa1048760:intron 45.0%
!!! GGGGAGGGATTTTAGTTAAG+AGG + chr7_2:10646069-10646088 None:intergenic 45.0%
CTAAAATCCCTCCCCTATGT+TGG - chr7_2:10646074-10646093 Msa1048760:intron 45.0%
TCAGAAGACACGACTTCACT+AGG - chr7_2:10646264-10646283 Msa1048760:intron 45.0%
TAGCCTGTCAAGTCATCATC+AGG - chr7_2:10647204-10647223 Msa1048760:intron 45.0%
GGTCAGCAAGGTTCACATTA+TGG - chr7_2:10647285-10647304 Msa1048760:intron 45.0%
ATCCTCAACATATGGCTCCA+AGG - chr7_2:10647391-10647410 Msa1048760:intron 45.0%
TCATAACCCCTGTTGTGTGA+GGG + chr7_2:10647471-10647490 None:intergenic 45.0%
ATCATAACCCCTGTTGTGTG+AGG + chr7_2:10647472-10647491 None:intergenic 45.0%
ATAAGGACCGGTACAGTGTT+GGG + chr7_2:10647562-10647581 None:intergenic 45.0%
! GATGGACTTATGGAGGGTAA+AGG + chr7_2:10647585-10647604 None:intergenic 45.0%
CCATATGGATATTGTGCAGG+GGG + chr7_2:10647642-10647661 None:intergenic 45.0%
CCTCCATATGGATATTGTGC+AGG + chr7_2:10647645-10647664 None:intergenic 45.0%
CCTGCACAATATCCATATGG+AGG - chr7_2:10647642-10647661 Msa1048760:CDS 45.0%
! TAGGTTGGATGTCCTCCATA+TGG + chr7_2:10647657-10647676 None:intergenic 45.0%
TCTGGATGTTGTCCTTGTGA+AGG + chr7_2:10647876-10647895 None:intergenic 45.0%
GGACAACATCCAGAGTCTTA+TGG - chr7_2:10647882-10647901 Msa1048760:intron 45.0%
GCTGGAGTACAACCATGATA+CGG + chr7_2:10647939-10647958 None:intergenic 45.0%
GCTGGAGTAGAACCATGATA+CGG + chr7_2:10648029-10648048 None:intergenic 45.0%
TCTGGATGTTGTCCTTGTGA+AGG + chr7_2:10647876-10647895 None:intergenic 45.0%
GGACAACATCCAGAGTCTTA+TGG - chr7_2:10647882-10647901 Msa1048760:intron 45.0%
GCTGGAGTAGAACCATGATA+CGG + chr7_2:10648029-10648048 None:intergenic 45.0%
CTCCAGCACAATCATATCTC+AGG - chr7_2:10648162-10648181 Msa1048760:intron 45.0%
TATCTCAGGCCACCATTGTT+TGG - chr7_2:10648176-10648195 Msa1048760:intron 45.0%
TCTGGATGTTGTCCTTGTGA+AGG + chr7_2:10647876-10647895 None:intergenic 45.0%
TCTACTCCAGCACAATCACA+TGG - chr7_2:10648281-10648300 Msa1048760:CDS 45.0%
ACTGGATGTTGTCCTTGTGA+AGG + chr7_2:10648332-10648351 None:intergenic 45.0%
! GACAACATCCAGTCTTATGG+CGG - chr7_2:10648339-10648358 Msa1048760:five_prime_UTR 45.0%
TGAACCAGAGTCATGGACAC+CGG - chr7_2:10640811-10640830 Msa1048760:CDS 50.0%
GTTTGTGTCCGTGTCATGTC+CGG + chr7_2:10640833-10640852 None:intergenic 50.0%
! CATATGTGTCAGTGTCGGGT+CGG - chr7_2:10640907-10640926 Msa1048760:CDS 50.0%
GATCAAGCATGTCCCGATGT+CGG + chr7_2:10640952-10640971 None:intergenic 50.0%
ATCGGGACATGCTTGATCTG+AGG - chr7_2:10640954-10640973 Msa1048760:CDS 50.0%
AAAGAAGGTTGCTGAGCCAG+AGG - chr7_2:10641045-10641064 Msa1048760:CDS 50.0%
AAAGGTGGGATCATTCGAGC+TGG + chr7_2:10641194-10641213 None:intergenic 50.0%
TGTGGTTGTTGTGTCAGACC+TGG + chr7_2:10641254-10641273 None:intergenic 50.0%
GTGGATACTGGATAGCTGCT+AGG - chr7_2:10641335-10641354 Msa1048760:CDS 50.0%
!! GCTGCTAGGCTAGTCTATAG+GGG - chr7_2:10641349-10641368 Msa1048760:CDS 50.0%
!! CTAGGCTAGTCTATAGGGGA+TGG - chr7_2:10641353-10641372 Msa1048760:CDS 50.0%
GTCTTGCCAAACACACCCTT+AGG - chr7_2:10641716-10641735 Msa1048760:intron 50.0%
! TCCAAGCCTAAGGGTGTGTT+TGG + chr7_2:10641725-10641744 None:intergenic 50.0%
GGTTGTAGACCTGCAAAAGG+GGG + chr7_2:10642547-10642566 None:intergenic 50.0%
GAAATTCCACAGGCTGATGC+TGG - chr7_2:10642800-10642819 Msa1048760:intron 50.0%
ATTGGATGCCATGAGTGCAG+AGG - chr7_2:10643084-10643103 Msa1048760:intron 50.0%
GAAATTCCACAGGCTGATGC+TGG - chr7_2:10642800-10642819 Msa1048760:intron 50.0%
ATCCCACAATAGCCTGAGCA+GGG + chr7_2:10643363-10643382 None:intergenic 50.0%
TTGGCTTCGGGAAGATGTTG+AGG + chr7_2:10643950-10643969 None:intergenic 50.0%
GCCTCTTATCAGCGGTAACT+TGG + chr7_2:10643994-10644013 None:intergenic 50.0%
GACAAAGGAAGCCTTGAGTC+AGG - chr7_2:10644278-10644297 Msa1048760:intron 50.0%
! TGCTGATTGTGGAGGTGATC+GGG - chr7_2:10644616-10644635 Msa1048760:intron 50.0%
AGAAAGCAATGCTGACCCCA+TGG + chr7_2:10645160-10645179 None:intergenic 50.0%
! CTCATTTTGAGCGCCAATGC+CGG + chr7_2:10645317-10645336 None:intergenic 50.0%
TCAGAAGACACGACTTCACC+AGG + chr7_2:10645385-10645404 None:intergenic 50.0%
ATCAAGGTAGCCATGAGACC+CGG - chr7_2:10645512-10645531 Msa1048760:CDS 50.0%
CTGCTTTCCAACATAGGGGA+GGG + chr7_2:10646084-10646103 None:intergenic 50.0%
!! CACTTTCGTGCTCTGAAGAG+AGG + chr7_2:10646451-10646470 None:intergenic 50.0%
! GGAGGAGCATGTCCTTCAAT+CGG - chr7_2:10646989-10647008 Msa1048760:intron 50.0%
! CCACCTGATGATGACTTGAC+AGG + chr7_2:10647210-10647229 None:intergenic 50.0%
CCTGTCAAGTCATCATCAGG+TGG - chr7_2:10647207-10647226 Msa1048760:intron 50.0%
ATCTGGTGGTCCACCACTAT+GGG - chr7_2:10647263-10647282 Msa1048760:intron 50.0%
CTCCTTGGAGCCATATGTTG+AGG + chr7_2:10647396-10647415 None:intergenic 50.0%
ATGGCTCCAAGGAGCAGTTA+CGG - chr7_2:10647402-10647421 Msa1048760:intron 50.0%
! GAGCAGTTACGGTTCTGGTT+GGG - chr7_2:10647413-10647432 Msa1048760:intron 50.0%
! CAGTGTTGGGGGATAGATCT+GGG + chr7_2:10647549-10647568 None:intergenic 50.0%
! ACAGTGTTGGGGGATAGATC+TGG + chr7_2:10647550-10647569 None:intergenic 50.0%
TCTATCCCCCAACACTGTAC+CGG - chr7_2:10647552-10647571 Msa1048760:CDS 50.0%
TAAGGACCGGTACAGTGTTG+GGG + chr7_2:10647561-10647580 None:intergenic 50.0%
GATAAGGACCGGTACAGTGT+TGG + chr7_2:10647563-10647582 None:intergenic 50.0%
GGAGGGTAAAGGATAAGGAC+CGG + chr7_2:10647574-10647593 None:intergenic 50.0%
! ACAGGGGATGGACTTATGGA+GGG + chr7_2:10647591-10647610 None:intergenic 50.0%
! AACAGGGGATGGACTTATGG+AGG + chr7_2:10647592-10647611 None:intergenic 50.0%
! CTGAACAGGGGATGGACTTA+TGG + chr7_2:10647595-10647614 None:intergenic 50.0%
ATGGATATTGTGCAGGGGGA+CGG + chr7_2:10647638-10647657 None:intergenic 50.0%
CCCCCTGCACAATATCCATA+TGG - chr7_2:10647639-10647658 Msa1048760:CDS 50.0%
TGCATCATTTGCTTGAGCCC+AGG + chr7_2:10647688-10647707 None:intergenic 50.0%
GCTGGAGTAGAACCCTGATA+CGG + chr7_2:10647816-10647835 None:intergenic 50.0%
CTCCAGCACAATCATATGGC+AGG - chr7_2:10647829-10647848 Msa1048760:intron 50.0%
TATGGCAGGCCACCATTGTT+TGG - chr7_2:10647843-10647862 Msa1048760:intron 50.0%
GAAGGTGGCATGCCAAACAA+TGG + chr7_2:10647858-10647877 None:intergenic 50.0%
TTTGGCATGCCACCTTCACA+AGG - chr7_2:10647861-10647880 Msa1048760:intron 50.0%
GGATGTTGTCCTTGTGAAGG+TGG + chr7_2:10647873-10647892 None:intergenic 50.0%
CTCCAGCACAATCATATGGC+AGG - chr7_2:10647829-10647848 Msa1048760:intron 50.0%
TATGGCAGGCCACCATTGTT+TGG - chr7_2:10647843-10647862 Msa1048760:intron 50.0%
GAAGGTGGCATGCCAAACAA+TGG + chr7_2:10647858-10647877 None:intergenic 50.0%
GGTTCTACTCCAGCACCATA+TGG - chr7_2:10648035-10648054 Msa1048760:intron 50.0%
AACAATGGTGGCCTGCCATA+TGG + chr7_2:10647843-10647862 None:intergenic 50.0%
TATGGCAGGCCACCATTGTT+TGG - chr7_2:10647843-10647862 Msa1048760:intron 50.0%
GAAGGTGGCATGCCAAACAA+TGG + chr7_2:10647858-10647877 None:intergenic 50.0%
TTTGGCATGCCACCTTCACA+AGG - chr7_2:10647861-10647880 Msa1048760:intron 50.0%
GGATGTTGTCCTTGTGAAGG+TGG + chr7_2:10647873-10647892 None:intergenic 50.0%
GGCCTGAGATATGATTGTGC+TGG + chr7_2:10648167-10648186 None:intergenic 50.0%
GAAGGTGGCATGCCAAACAA+TGG + chr7_2:10647858-10647877 None:intergenic 50.0%
TTTGGCATGCCACCTTCACA+AGG - chr7_2:10647861-10647880 Msa1048760:intron 50.0%
GGATGTTGTCCTTGTGAAGG+TGG + chr7_2:10647873-10647892 None:intergenic 50.0%
GGACAACATCCAGAGTCCTA+TGG - chr7_2:10648215-10648234 Msa1048760:CDS 50.0%
GCTGGAGTAGAACCCTGATA+CGG + chr7_2:10647816-10647835 None:intergenic 50.0%
GGATGTTGTCCTTGTGAAGG+TGG + chr7_2:10647873-10647892 None:intergenic 50.0%
ATGTCCGGTGTCCATGACTC+TGG + chr7_2:10640818-10640837 None:intergenic 55.0%
CATGGACACCGGACATGACA+CGG - chr7_2:10640822-10640841 Msa1048760:CDS 55.0%
GCCAAACACACCCTTAGGCT+TGG - chr7_2:10641721-10641740 Msa1048760:intron 55.0%
GAATCTCCAGCATCAGCCTG+TGG + chr7_2:10642809-10642828 None:intergenic 55.0%
ATCCCATGATAGCCCGAGCA+GGG + chr7_2:10643246-10643265 None:intergenic 55.0%
ATTCCACAGGCTGATGCTGG+AGG - chr7_2:10642803-10642822 Msa1048760:intron 55.0%
TCTCCTGCACTTGTAGCTCG+AGG - chr7_2:10643331-10643350 Msa1048760:intron 55.0%
TCCCCTGCTCAGGCTATTGT+GGG - chr7_2:10643358-10643377 Msa1048760:intron 55.0%
TCCCACAATAGCCTGAGCAG+GGG + chr7_2:10643362-10643381 None:intergenic 55.0%
GATCCCACAATAGCCTGAGC+AGG + chr7_2:10643364-10643383 None:intergenic 55.0%
GGCAAAGGAAGCCTTGAGTC+AGG - chr7_2:10644036-10644055 Msa1048760:intron 55.0%
TCGGCTTCGGGAAGATGTTG+AGG + chr7_2:10644192-10644211 None:intergenic 55.0%
CGCTCAAAATGAGCAGCCGT+AGG - chr7_2:10645324-10645343 Msa1048760:CDS 55.0%
CCTGCTTTCCAACATAGGGG+AGG + chr7_2:10646085-10646104 None:intergenic 55.0%
CCTCCCCTATGTTGGAAAGC+AGG - chr7_2:10646082-10646101 Msa1048760:intron 55.0%
!! TGGACTGGTTCCGGATCTCA+TGG - chr7_2:10646124-10646143 Msa1048760:intron 55.0%
!! GTGCTCTGAAGAGAGGTGTC+AGG + chr7_2:10646444-10646463 None:intergenic 55.0%
ATCAGGTGGTTTCAGCCAGC+AGG - chr7_2:10647221-10647240 Msa1048760:intron 55.0%
GATCTGGTGGTCCACCACTA+TGG - chr7_2:10647262-10647281 Msa1048760:intron 55.0%
TCTGGTGGTCCACCACTATG+GGG - chr7_2:10647264-10647283 Msa1048760:intron 55.0%
GAACCTTGCTGACCCCATAG+TGG + chr7_2:10647279-10647298 None:intergenic 55.0%
CCAGAACCGTAACTGCTCCT+TGG + chr7_2:10647411-10647430 None:intergenic 55.0%
CCAAGGAGCAGTTACGGTTC+TGG - chr7_2:10647408-10647427 Msa1048760:intron 55.0%
! GGAGCAGTTACGGTTCTGGT+TGG - chr7_2:10647412-10647431 Msa1048760:intron 55.0%
! ACGGTTCTGGTTGGGAGCAA+AGG - chr7_2:10647421-10647440 Msa1048760:intron 55.0%
AAGGCCTCACCAGAGTTTGC+AGG - chr7_2:10647440-10647459 Msa1048760:CDS 55.0%
AGGCCTCACCAGAGTTTGCA+GGG - chr7_2:10647441-10647460 Msa1048760:CDS 55.0%
TAACCCCTGTTGTGTGAGGG+CGG + chr7_2:10647468-10647487 None:intergenic 55.0%
! TGGGGGATAGATCTGGGATG+CGG + chr7_2:10647543-10647562 None:intergenic 55.0%
! AAGGACCGGTACAGTGTTGG+GGG + chr7_2:10647560-10647579 None:intergenic 55.0%
ATCCAACCTACCCTCAAGCC+TGG - chr7_2:10647667-10647686 Msa1048760:CDS 55.0%
TCCAACCTACCCTCAAGCCT+GGG - chr7_2:10647668-10647687 Msa1048760:CDS 55.0%
TTGCTTGAGCCCAGGCTTGA+GGG + chr7_2:10647680-10647699 None:intergenic 55.0%
TTTGCTTGAGCCCAGGCTTG+AGG + chr7_2:10647681-10647700 None:intergenic 55.0%
GATGCACCTCCACAGCAGTA+TGG - chr7_2:10647702-10647721 Msa1048760:intron 55.0%
GGCTTTCCATACTGCTGTGG+AGG + chr7_2:10647711-10647730 None:intergenic 55.0%
GGTGGCTTTCCATACTGCTG+TGG + chr7_2:10647714-10647733 None:intergenic 55.0%
GAAGGTGGCACGCCATACAA+TGG + chr7_2:10647735-10647754 None:intergenic 55.0%
TATGGCGTGCCACCTTCACA+AGG - chr7_2:10647738-10647757 Msa1048760:intron 55.0%
ATGGCGTGCCACCTTCACAA+GGG - chr7_2:10647739-10647758 Msa1048760:intron 55.0%
TGTGGATGCTGCCCTTGTGA+AGG + chr7_2:10647753-10647772 None:intergenic 55.0%
TTCACAAGGGCAGCATCCAC+AGG - chr7_2:10647752-10647771 Msa1048760:intron 55.0%
CTAGGGTGGACATAAGCCTG+TGG + chr7_2:10647771-10647790 None:intergenic 55.0%
ACCAGGCGAGATTCCGTATC+AGG - chr7_2:10647800-10647819 Msa1048760:intron 55.0%
CCAGGCGAGATTCCGTATCA+GGG - chr7_2:10647801-10647820 Msa1048760:intron 55.0%
GGCCTGCCATATGATTGTGC+TGG + chr7_2:10647834-10647853 None:intergenic 55.0%
GGTGGCATGCCAAACAATGG+TGG + chr7_2:10647855-10647874 None:intergenic 55.0%
CCATGATACGGAATCTCGCC+TGG + chr7_2:10647927-10647946 None:intergenic 55.0%
CCAGGCGAGATTCCGTATCA+TGG - chr7_2:10647801-10647820 Msa1048760:intron 55.0%
GGCCTGCCATATGATTGTGC+TGG + chr7_2:10647834-10647853 None:intergenic 55.0%
GGTGGCATGCCAAACAATGG+TGG + chr7_2:10647855-10647874 None:intergenic 55.0%
CCATGATACGGAATCTCGCC+TGG + chr7_2:10647927-10647946 None:intergenic 55.0%
CCAGGCGAGATTCCGTATCA+TGG - chr7_2:10647801-10647820 Msa1048760:intron 55.0%
CTACTCCAGCACCATATGGC+AGG - chr7_2:10648039-10648058 Msa1048760:intron 55.0%
GGTGGCATGCCAAACAATGG+TGG + chr7_2:10647855-10647874 None:intergenic 55.0%
CCATGATACGGAATCTCGCC+TGG + chr7_2:10647927-10647946 None:intergenic 55.0%
CCAGGCGAGATTCCGTATCA+TGG - chr7_2:10647801-10647820 Msa1048760:intron 55.0%
GGTGGCATGCCAAACAATGG+TGG + chr7_2:10647855-10647874 None:intergenic 55.0%
ACCAGGCGAGATTCCGTATC+AGG - chr7_2:10647800-10647819 Msa1048760:intron 55.0%
CCAGGCGAGATTCCGTATCA+GGG - chr7_2:10647801-10647820 Msa1048760:intron 55.0%
CTCCAGCACAATCACATGGC+AGG - chr7_2:10648285-10648304 Msa1048760:CDS 55.0%
CATGGCAGGCCACCATTGTA+TGG - chr7_2:10648299-10648318 Msa1048760:CDS 55.0%
GAAGGTGGCACGCCATACAA+TGG + chr7_2:10647735-10647754 None:intergenic 55.0%
TATGGCGTGCCACCTTCACA+AGG - chr7_2:10647738-10647757 Msa1048760:intron 55.0%
! TGTCAGTGTCGGGTCGGTGT+TGG - chr7_2:10640913-10640932 Msa1048760:CDS 60.0%
CTCAAGACCTCTCCCCTGCT+CGG - chr7_2:10643230-10643249 Msa1048760:intron 60.0%
TCAAGACCTCTCCCCTGCTC+GGG - chr7_2:10643231-10643250 Msa1048760:intron 60.0%
TCCCCTGCTCGGGCTATCAT+GGG - chr7_2:10643241-10643260 Msa1048760:intron 60.0%
TCCCATGATAGCCCGAGCAG+GGG + chr7_2:10643245-10643264 None:intergenic 60.0%
GATCCCATGATAGCCCGAGC+AGG + chr7_2:10643247-10643266 None:intergenic 60.0%
GAACCTCCAGCATCAGCCTG+TGG + chr7_2:10643313-10643332 None:intergenic 60.0%
AGGCCTCGAGCTACAAGTGC+AGG + chr7_2:10643337-10643356 None:intergenic 60.0%
CAATAGCCTGAGCAGGGGAG+AGG + chr7_2:10643357-10643376 None:intergenic 60.0%
CTCCCCTGCTCAGGCTATTG+TGG - chr7_2:10643357-10643376 Msa1048760:intron 60.0%
!! TGGACTGGTTCCGGGTCTCA+TGG + chr7_2:10645525-10645544 None:intergenic 60.0%
!! AGATCCTTGTGGCGGACGGT+AGG + chr7_2:10647247-10647266 None:intergenic 60.0%
TACCGTCCGCCACAAGGATC+TGG - chr7_2:10647246-10647265 Msa1048760:intron 60.0%
! CACCAGATCCTTGTGGCGGA+CGG + chr7_2:10647251-10647270 None:intergenic 60.0%
GGACCACCAGATCCTTGTGG+CGG + chr7_2:10647255-10647274 None:intergenic 60.0%
GGTGGACCACCAGATCCTTG+TGG + chr7_2:10647258-10647277 None:intergenic 60.0%
CCTTGCTGACCCCATAGTGG+TGG + chr7_2:10647276-10647295 None:intergenic 60.0%
CCACCACTATGGGGTCAGCA+AGG - chr7_2:10647273-10647292 Msa1048760:intron 60.0%
GGCCTCACCAGAGTTTGCAG+GGG - chr7_2:10647442-10647461 Msa1048760:CDS 60.0%
! GATAGATCTGGGATGCGGGG+CGG + chr7_2:10647538-10647557 None:intergenic 60.0%
! GGGGATAGATCTGGGATGCG+GGG + chr7_2:10647541-10647560 None:intergenic 60.0%
! GGGGGATAGATCTGGGATGC+GGG + chr7_2:10647542-10647561 None:intergenic 60.0%
TTGAGCCCAGGCTTGAGGGT+AGG + chr7_2:10647676-10647695 None:intergenic 60.0%
GGTGGCACGCCATACAATGG+TGG + chr7_2:10647732-10647751 None:intergenic 60.0%
GGATGCTGCCCTTGTGAAGG+TGG + chr7_2:10647750-10647769 None:intergenic 60.0%
!! CTGGTTGAGTGGCTCTAGGG+TGG + chr7_2:10647785-10647804 None:intergenic 60.0%
CACCCTAGAGCCACTCAACC+AGG - chr7_2:10647783-10647802 Msa1048760:intron 60.0%
! CGCCTGGTTGAGTGGCTCTA+GGG + chr7_2:10647788-10647807 None:intergenic 60.0%
TCGCCTGGTTGAGTGGCTCT+AGG + chr7_2:10647789-10647808 None:intergenic 60.0%
CGGAATCTCGCCTGGTTGAG+TGG + chr7_2:10647796-10647815 None:intergenic 60.0%
CCCTGATACGGAATCTCGCC+TGG + chr7_2:10647804-10647823 None:intergenic 60.0%
CTAGGGGGGCCATAAGACTC+TGG + chr7_2:10647894-10647913 None:intergenic 60.0%
!! CTGGTTGAGTGGCTCTAGGG+GGG + chr7_2:10647785-10647804 None:intergenic 60.0%
!! CCTGGTTGAGTGGCTCTAGG+GGG + chr7_2:10647786-10647805 None:intergenic 60.0%
!! GCCTGGTTGAGTGGCTCTAG+GGG + chr7_2:10647787-10647806 None:intergenic 60.0%
! CGCCTGGTTGAGTGGCTCTA+GGG + chr7_2:10647788-10647807 None:intergenic 60.0%
TCGCCTGGTTGAGTGGCTCT+AGG + chr7_2:10647789-10647808 None:intergenic 60.0%
CGGAATCTCGCCTGGTTGAG+TGG + chr7_2:10647796-10647815 None:intergenic 60.0%
GGTTGAGTGGCTCGTGAAGG+TGG + chr7_2:10647996-10648015 None:intergenic 60.0%
CCTGGTTGAGTGGCTCGTGA+AGG + chr7_2:10647999-10648018 None:intergenic 60.0%
CCTTCACGAGCCACTCAACC+AGG - chr7_2:10647996-10648015 Msa1048760:intron 60.0%
CGGAATCTCGCCTGGTTGAG+TGG + chr7_2:10647796-10647815 None:intergenic 60.0%
CTAGGGGGGCCATAAGACTC+TGG + chr7_2:10647894-10647913 None:intergenic 60.0%
!! CTGGTTGAGTGGCTCTAGGG+GGG + chr7_2:10647785-10647804 None:intergenic 60.0%
!! CCTGGTTGAGTGGCTCTAGG+GGG + chr7_2:10647786-10647805 None:intergenic 60.0%
!! GCCTGGTTGAGTGGCTCTAG+GGG + chr7_2:10647787-10647806 None:intergenic 60.0%
! CGCCTGGTTGAGTGGCTCTA+GGG + chr7_2:10647788-10647807 None:intergenic 60.0%
TCGCCTGGTTGAGTGGCTCT+AGG + chr7_2:10647789-10647808 None:intergenic 60.0%
CGGAATCTCGCCTGGTTGAG+TGG + chr7_2:10647796-10647815 None:intergenic 60.0%
!! CTGGTTGAGTGGCTCTAGGG+GGG + chr7_2:10647785-10647804 None:intergenic 60.0%
!! CCTGGTTGAGTGGCTCTAGG+GGG + chr7_2:10647786-10647805 None:intergenic 60.0%
!! GCCTGGTTGAGTGGCTCTAG+GGG + chr7_2:10647787-10647806 None:intergenic 60.0%
! CGCCTGGTTGAGTGGCTCTA+GGG + chr7_2:10647788-10647807 None:intergenic 60.0%
TCGCCTGGTTGAGTGGCTCT+AGG + chr7_2:10647789-10647808 None:intergenic 60.0%
CGGAATCTCGCCTGGTTGAG+TGG + chr7_2:10647796-10647815 None:intergenic 60.0%
CCCTGATACGGAATCTCGCC+TGG + chr7_2:10647804-10647823 None:intergenic 60.0%
GGCCTGCCATGTGATTGTGC+TGG + chr7_2:10648290-10648309 None:intergenic 60.0%
GGTGGCACGCCATACAATGG+TGG + chr7_2:10647732-10647751 None:intergenic 60.0%
TAGGGTGGCCGCCATAAGAC+TGG + chr7_2:10648350-10648369 None:intergenic 60.0%
TGATAGCCCGAGCAGGGGAG+AGG + chr7_2:10643240-10643259 None:intergenic 65.0%
CTCCCCTGCTCGGGCTATCA+TGG - chr7_2:10643240-10643259 Msa1048760:intron 65.0%
CGTCCGCCACAAGGATCTGG+TGG - chr7_2:10647249-10647268 Msa1048760:intron 65.0%
GGCCCCTGCAAACTCTGGTG+AGG + chr7_2:10647447-10647466 None:intergenic 65.0%
GCCCAGGCTTGAGGGTAGGT+TGG + chr7_2:10647672-10647691 None:intergenic 65.0%
CCCCCTAGAGCCACTCAACC+AGG - chr7_2:10647906-10647925 Msa1048760:intron 65.0%
GGTGGCCTGCCATATGGTGC+TGG + chr7_2:10648047-10648066 None:intergenic 65.0%
CCCCCTAGAGCCACTCAACC+AGG - chr7_2:10647906-10647925 Msa1048760:intron 65.0%
CTAGGGGGGCCATAGGACTC+TGG + chr7_2:10648227-10648246 None:intergenic 65.0%
!! AGTGGCTCTAGGGGGGCCAT+AGG + chr7_2:10647901-10647920 None:intergenic 65.0%
CCCCCTAGAGCCACTCAACC+AGG - chr7_2:10647906-10647925 Msa1048760:intron 65.0%
TCGAGGCCTCTCCCCTGCTC+AGG - chr7_2:10643348-10643367 Msa1048760:intron 70.0%
GGGCAACAAGCTGCGCCGCT+AGG - chr7_2:10645782-10645801 Msa1048760:intron 70.0%
CAGGCCTACCGTCCGCCACA+AGG - chr7_2:10647240-10647259 Msa1048760:intron 70.0%
AGGGCGGCCCCTGCAAACTC+TGG + chr7_2:10647452-10647471 None:intergenic 70.0%
AGGGGCCGCCCTCACACAAC+AGG - chr7_2:10647460-10647479 Msa1048760:CDS 70.0%
GGGGCCGCCCTCACACAACA+GGG - chr7_2:10647461-10647480 Msa1048760:CDS 70.0%
GGGCCGCCCTCACACAACAG+GGG - chr7_2:10647462-10647481 Msa1048760:CDS 70.0%
!! GTGGCGGACGGTAGGCCTGC+TGG + chr7_2:10647239-10647258 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 10640361 10648370 10640361 ID=Msa1048760;Name=Msa1048760
chr7_2 mRNA 10640361 10648370 10640361 ID=Msa1048760-mRNA-1;Parent=Msa1048760;Name=Msa1048760-mRNA-1;_AED=0.18;_eAED=0.18;_QI=44|1|0.88|1|1|1|9|0|738
chr7_2 exon 10640361 10641524 10640361 ID=Msa1048760-mRNA-1:exon:2815;Parent=Msa1048760-mRNA-1
chr7_2 exon 10644432 10644548 10644432 ID=Msa1048760-mRNA-1:exon:2814;Parent=Msa1048760-mRNA-1
chr7_2 exon 10644674 10644790 10644674 ID=Msa1048760-mRNA-1:exon:2813;Parent=Msa1048760-mRNA-1
chr7_2 exon 10645314 10645532 10645314 ID=Msa1048760-mRNA-1:exon:2812;Parent=Msa1048760-mRNA-1
chr7_2 exon 10645626 10645697 10645626 ID=Msa1048760-mRNA-1:exon:2811;Parent=Msa1048760-mRNA-1
chr7_2 exon 10645875 10645919 10645875 ID=Msa1048760-mRNA-1:exon:2810;Parent=Msa1048760-mRNA-1
chr7_2 exon 10646001 10646072 10646001 ID=Msa1048760-mRNA-1:exon:2809;Parent=Msa1048760-mRNA-1
chr7_2 exon 10647431 10647708 10647431 ID=Msa1048760-mRNA-1:exon:2808;Parent=Msa1048760-mRNA-1
chr7_2 exon 10648194 10648370 10648194 ID=Msa1048760-mRNA-1:exon:2807;Parent=Msa1048760-mRNA-1
chr7_2 five_prime_UTR 10648327 10648370 10648327 ID=Msa1048760-mRNA-1:five_prime_utr;Parent=Msa1048760-mRNA-1
chr7_2 CDS 10648194 10648326 10648194 ID=Msa1048760-mRNA-1:cds;Parent=Msa1048760-mRNA-1
chr7_2 CDS 10647431 10647708 10647431 ID=Msa1048760-mRNA-1:cds;Parent=Msa1048760-mRNA-1
chr7_2 CDS 10646001 10646072 10646001 ID=Msa1048760-mRNA-1:cds;Parent=Msa1048760-mRNA-1
chr7_2 CDS 10645875 10645919 10645875 ID=Msa1048760-mRNA-1:cds;Parent=Msa1048760-mRNA-1
chr7_2 CDS 10645626 10645697 10645626 ID=Msa1048760-mRNA-1:cds;Parent=Msa1048760-mRNA-1
chr7_2 CDS 10645314 10645532 10645314 ID=Msa1048760-mRNA-1:cds;Parent=Msa1048760-mRNA-1
chr7_2 CDS 10644674 10644790 10644674 ID=Msa1048760-mRNA-1:cds;Parent=Msa1048760-mRNA-1
chr7_2 CDS 10644432 10644548 10644432 ID=Msa1048760-mRNA-1:cds;Parent=Msa1048760-mRNA-1
chr7_2 CDS 10640361 10641524 10640361 ID=Msa1048760-mRNA-1:cds;Parent=Msa1048760-mRNA-1
Gene Sequence

>Msa1048760

ATGGCCGAAGAAGAATTGGTTGTTGTTACAAGTTTCGTTCCCTCTGATTGTAAGCGCAAGTTCGAAGATCAACACTCTGATGACGGTGAGAACAAGCGTCCTTGTCTTGACGATGATAACCAGAATTACCTAGCTGATACTAACAGACATGATGAAAAGAAGGTTGCTGAGCCAGAGGAAAATGCTCATTCGGAGGAAATTCAAGATGTATCTAAAGATAATTCAGAAGAAACGGCTAAGCCTACCAATACCAAAGAGATTCTCGTTGAGGAGCCATCTAAATCAATTGAACAACTTGATTCCAGCTCGAATGATCCCACCTTTCAGCATGATACTTCTTCTGGACAAAAGCAACCTATATCCAGGTCTGACACAACAACCACACAAGAAATTGAGGTTCCTAGCAATAAGGAGTTCAATTTGAAGGATCTTTTGGAAAGTATATATGAGTTCGAAAACCTAATGGATGCCATGTTCACAGAGGCTGATGCTGGAGATTCTCCTGCACGTGAAGTTCCAAATGAGAAGGAGTTCAATTTGAATGATTTTTTGGAAAGTATAGACAAGGCAGAAAAGCTATTGGATGCCATGAGTGCAGAGGACGATGATGGAGGTTCTCCTGCATTTGTAGCTCAAGACCTCTCCCCTGCTCGGGCTATCATGGGATCTGATCAAATTCAAATACAAGTTCCAAATGAGAAGTTTGAAATTCCACAGGCTGATGCTGGAGGTTCTCCTGCACTTGTAGCTCGAGGCCTCTCCCCTGCTCAGGCTATTGTGGGATCTGATCAAATTCAGATACAAGTTCCAAATGAGAAATTGATACCTCAACATCTTCCCGAAGCCAATGATTCTAAAGAAAGGACTGTCCAAGTTACCGCTGATAAGAGGCAAATTGAAATTGCACAAGAAATGGCAAAGGAAGCCTTGAGTCAGTTGATACCTCAACATCTTCCCGAAGCCGATGATTCTAAAGAAAGGACTGTCCAAGTTACTGGTGATAAGAGGCAAATTGAAATTGCACAGGAAATGACAAAGGAAGCCTTGAGTCAGCCTGTCAAGTCATCATCAGGTGGTTTCAGCCAGCAGGCCTACCGTCCGCCACAAGGATCTGGTGGTCCACCACTATGGGGTCAGCAAGGTTCACATTATGGCCACCCACCATCATATTACTATCAGCATCGCTGGCCATATCCCTCTCATAATCAATCATATGCACCTACTCCTTATGGAAATTATCCTCAACATATGGCTCCAAGGAGCAGTTACGGTTCTGGTTGGGAGCAAAGGCCTCACCAGAGTTTGCAGGGGCCGCCCTCACACAACAGGGGTTATGATCATTATGGTGGACAAAGGGGTCATTCATCTGAAGTTACATCATCCGCCCCGCATCCCAGATCTATCCCCCAACACTGTACCGGTCCTTATCCTTTACCCTCCATAAGTCCATCCCCTGTTCAGATTAATTACAATTACGAAAACCGTCCCCCTGCACAATATCCATATGGAGGACATCCAACCTACCCTCAAGCCTGGGCTCAAGCAAATGATGCACCTCCACAGCAGTATGGAAAGCCACCATTGTATGGCGTGCCACCTTCACAAGGGCAGCATCCACAGGCTTATGTCCACCCTAGAGCCACTCAACCAGGCGAGATTCCGTATCAGGGTTCTACTCCAGCACAATCATATGGCAGGCCACCATTGTTTGGCATGCCACCTTCACAAGGACAACATCCAGAGTCTTATGGCCCCCCTAGAGCCACTCAACCAGGCGAGATTCCGTATCATGGTTGTACTCCAGCACAATCATATGGCAGGCCACCATTGTTTGGCATGCCACCTTCACGAGCCACTCAACCAGGCGAGATTCCGTATCATGGTTCTACTCCAGCACCATATGGCAGGCCACCATTGTTTGGCATGCCACCTTCACAAGGACAACATCCAGAGTCTTATGGCCCCCCTAGAGCCACTCAACCAGGCGAGATTCCGTATCATGGTTCTACTCCAGCACAATCATATCTCAGGCCACCATTGTTTGGCATGCCACCTTCACAAGGACAACATCCAGAGTCCTATGGCCCCCCTAGAGCCACTCAACCAGGCGAGATTCCGTATCAGGGTTCTACTCCAGCACAATCACATGGCAGGCCACCATTGTATGGCGTGCCACCTTCACAAGGACAACATCCAGTCTTATGGCGGCCACCCTAG
Protein sequence

>Msa1048760

MAEEELVVVTSFVPSDCKRKFEDQHSDDGENKRPCLDDDNQNYLADTNRHDEKKVAEPEENAHSEEIQDVSKDNSEETAKPTNTKEILVEEPSKSIEQLDSSSNDPTFQHDTSSGQKQPISRSDTTTTQEIEVPSNKEFNLKDLLESIYEFENLMDAMFTEADAGDSPAREVPNEKEFNLNDFLESIDKAEKLLDAMSAEDDDGGSPAFVAQDLSPARAIMGSDQIQIQVPNEKFEIPQADAGGSPALVARGLSPAQAIVGSDQIQIQVPNEKLIPQHLPEANDSKERTVQVTADKRQIEIAQEMAKEALSQLIPQHLPEADDSKERTVQVTGDKRQIEIAQEMTKEALSQPVKSSSGGFSQQAYRPPQGSGGPPLWGQQGSHYGHPPSYYYQHRWPYPSHNQSYAPTPYGNYPQHMAPRSSYGSGWEQRPHQSLQGPPSHNRGYDHYGGQRGHSSEVTSSAPHPRSIPQHCTGPYPLPSISPSPVQINYNYENRPPAQYPYGGHPTYPQAWAQANDAPPQQYGKPPLYGVPPSQGQHPQAYVHPRATQPGEIPYQGSTPAQSYGRPPLFGMPPSQGQHPESYGPPRATQPGEIPYHGCTPAQSYGRPPLFGMPPSRATQPGEIPYHGSTPAPYGRPPLFGMPPSQGQHPESYGPPRATQPGEIPYHGSTPAQSYLRPPLFGMPPSQGQHPESYGPPRATQPGEIPYQGSTPAQSHGRPPLYGVPPSQGQHPVLWRPP*