AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0694840


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0694840 MtrunA17_Chr4g0045851 98.507 201 3 0 1 201 1 201 1.64e-138 385
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0694840 AT3G59800.2 85.149 101 15 0 1 101 1 101 6.39e-50 159
Msa0694840 AT3G59800.1 85.149 101 15 0 1 101 1 101 2.98e-49 159
Msa0694840 AT2G43795.2 49.701 167 83 1 30 195 1 167 3.22e-46 150
Msa0694840 AT2G43795.1 73.333 90 24 0 30 119 1 90 8.62e-42 138

Find 66 sgRNAs with CRISPR-Local

Find 558 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATAACACTTCTGGATT+TGG 0.223401 4_4:-64213704 Msa0694840:three_prime_UTR
TTTCTGCAAATAGTAAATTA+TGG 0.256609 4_4:-64213893 Msa0694840:three_prime_UTR
CTAGGAAGAAGAACTGAAAA+AGG 0.260060 4_4:-64216668 Msa0694840:intron
TCATAGCCAGACCTTGTTCT+TGG 0.262017 4_4:+64213627 None:intergenic
TCAAGAAGTTTGTTGACTTT+AGG 0.279506 4_4:-64213800 Msa0694840:three_prime_UTR
TTGATAGATTGATTGTTCTA+TGG 0.299314 4_4:+64220392 None:intergenic
TGATGTTTGAATAACACTTC+TGG 0.301559 4_4:-64213710 Msa0694840:three_prime_UTR
AATCTATCAATTCAGAGAAA+TGG 0.314391 4_4:-64220379 Msa0694840:exon
TCACAAATTTCAATCGAATC+AGG 0.320223 4_4:-64220451 Msa0694840:five_prime_UTR
ATCTATCAATTCAGAGAAAT+GGG 0.342377 4_4:-64220378 Msa0694840:exon
GCAAGGCTCGGTGGTGCTTC+CGG 0.354086 4_4:-64220324 Msa0694840:CDS
GTTGATAGTGGTTGAATACT+TGG 0.366478 4_4:-64213936 Msa0694840:exon
AGAGTGGCATGCTGCCCGTT+TGG 0.423871 4_4:-64219387 Msa0694840:CDS
GATGATGAAGAGGAGCTAGA+TGG 0.425155 4_4:+64214131 None:intergenic
TCTCTCTTCGTCTTCACTAC+TGG 0.428331 4_4:+64214097 None:intergenic
TTGATTGATGTAGTGTGAAA+AGG 0.442243 4_4:-64213777 Msa0694840:three_prime_UTR
TTGCAATGTGCGAACGAAGC+TGG 0.442809 4_4:+64220503 None:intergenic
CTTCTTTGACCGCTTAGACC+TGG 0.443954 4_4:+64214055 None:intergenic
AAACATCTCACACAATTACC+TGG 0.458263 4_4:-64219355 Msa0694840:CDS
ATAAGATGATGAGGGAGTAC+AGG 0.478016 4_4:-64216624 Msa0694840:CDS
TGATTGATGTAGTGTGAAAA+GGG 0.479537 4_4:-64213776 Msa0694840:three_prime_UTR
AAGGGCTCGCAAACTTTCCC+AGG 0.487233 4_4:-64216584 Msa0694840:CDS
AGCCTAAAGTTATCACGAAA+AGG 0.487395 4_4:+64213653 None:intergenic
ATGCCATCTTCAACCTCATC+GGG 0.490780 4_4:+64220297 None:intergenic
TACTAGAGTGATTTCTACCC+TGG 0.496543 4_4:+64216566 None:intergenic
GGGACATCAAGAGTTGATAG+TGG 0.496931 4_4:-64213948 Msa0694840:CDS
TTCACTACTGGAAGAGTATG+AGG 0.499980 4_4:+64214109 None:intergenic
AGTAAGTCTAAACATTCAAA+AGG 0.504331 4_4:-64216544 Msa0694840:intron
GCTTATCCAAGAACAAGGTC+TGG 0.504454 4_4:-64213633 Msa0694840:three_prime_UTR
CAGGTCTAAGCGGTCAAAGA+AGG 0.511908 4_4:-64214054 Msa0694840:CDS
GGCTCAACTAGATGCTGAAA+GGG 0.514123 4_4:-64216602 Msa0694840:CDS
AGAGTATGAGGATGATGAAG+AGG 0.519047 4_4:+64214121 None:intergenic
AAACGGGCAGCATGCCACTC+TGG 0.524308 4_4:+64219389 None:intergenic
TTCAACCTCATCGGGACCAC+CGG 0.529801 4_4:+64220305 None:intergenic
CACAAATTTCAATCGAATCA+GGG 0.541830 4_4:-64220450 Msa0694840:five_prime_UTR
TCCGCCACCATCTTCACTAT+CGG 0.542822 4_4:+64213995 None:intergenic
AGGAGCTATTATTTCAGAGT+GGG 0.556327 4_4:+64213673 None:intergenic
TCTGGAACCGATAGTGAAGA+TGG 0.562772 4_4:-64214002 Msa0694840:CDS
GGTCCCGATGAGGTTGAAGA+TGG 0.565102 4_4:-64220300 Msa0694840:CDS
CGATGAGGTTGAAGATGGCA+TGG 0.570062 4_4:-64220295 Msa0694840:intron
CATGCCATCTTCAACCTCAT+CGG 0.571808 4_4:+64220296 None:intergenic
GGGCTCAACTAGATGCTGAA+AGG 0.573209 4_4:-64216603 Msa0694840:CDS
ACAAAGCTATGCAGAGAGCA+AGG 0.581939 4_4:-64220341 Msa0694840:CDS
CAGATGCAGATAAGATGATG+AGG 0.597568 4_4:-64216633 Msa0694840:CDS
TTTAGGCTTATCCAAGAACA+AGG 0.601464 4_4:-64213638 Msa0694840:three_prime_UTR
AACATCTCACACAATTACCT+GGG 0.601521 4_4:-64219354 Msa0694840:CDS
TGAGGACTGTCGCAGGTGGA+TGG 0.601935 4_4:-64219425 Msa0694840:intron
AGGCTCGGTGGTGCTTCCGG+TGG 0.602328 4_4:-64220321 Msa0694840:CDS
TAAGATGATGAGGGAGTACA+GGG 0.603577 4_4:-64216623 Msa0694840:CDS
AGATGCAGATAAGATGATGA+GGG 0.604147 4_4:-64216632 Msa0694840:CDS
GAATCAGGGTCTAACTGTGG+TGG 0.616678 4_4:-64220436 Msa0694840:five_prime_UTR
ACCGATAGTGAAGATGGTGG+CGG 0.628462 4_4:-64213996 Msa0694840:CDS
ATGCAGAGAGCAAGGCTCGG+TGG 0.635782 4_4:-64220333 Msa0694840:CDS
GTTCATTTCATTCACCAGAG+TGG 0.638013 4_4:-64219403 Msa0694840:CDS
ACTAGAGTGATTTCTACCCT+GGG 0.639592 4_4:+64216567 None:intergenic
TGCTTCCGGTGGTCCCGATG+AGG 0.643153 4_4:-64220310 Msa0694840:CDS
AAGGAGCTATTATTTCAGAG+TGG 0.643772 4_4:+64213672 None:intergenic
TATTCTACTATACAGACAAG+AGG 0.650041 4_4:-64216432 Msa0694840:intron
ATTCTACTATACAGACAAGA+GGG 0.661482 4_4:-64216431 Msa0694840:intron
AGGGCTCGCAAACTTTCCCA+GGG 0.663904 4_4:-64216583 Msa0694840:CDS
GCTATGCAGAGAGCAAGGCT+CGG 0.668438 4_4:-64220336 Msa0694840:CDS
TCTATCAATTCAGAGAAATG+GGG 0.673304 4_4:-64220377 Msa0694840:exon
GATTGATGTAGTGTGAAAAG+GGG 0.678302 4_4:-64213775 Msa0694840:three_prime_UTR
GATCAAAGTCCAGGTCTAAG+CGG 0.689586 4_4:-64214064 Msa0694840:CDS
ATCGAATCAGGGTCTAACTG+TGG 0.693954 4_4:-64220439 Msa0694840:five_prime_UTR
GGAACCGATAGTGAAGATGG+TGG 0.710189 4_4:-64213999 Msa0694840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTATGAATTTCTTT+TGG - chr4_4:64214498-64214517 Msa0694840:intron 10.0%
!! TAAAATACTAATAAAATTCA+AGG - chr4_4:64216124-64216143 Msa0694840:intron 10.0%
!!! TAATTGTTAATTTGTTAATT+GGG + chr4_4:64216222-64216241 None:intergenic 10.0%
!!! TTAATTGTTAATTTGTTAAT+TGG + chr4_4:64216223-64216242 None:intergenic 10.0%
!! TATATATCGTTATATTTATT+TGG + chr4_4:64216690-64216709 None:intergenic 10.0%
!!! TTATTATTTGAAAGAATTTT+TGG - chr4_4:64216777-64216796 Msa0694840:intron 10.0%
!! TTTAAAAAAAAATAATATCC+AGG + chr4_4:64216956-64216975 None:intergenic 10.0%
!!! ATTGAAATTTGTGATTTTTA+GGG + chr4_4:64213682-64213701 None:intergenic 15.0%
!! GAAATTATAAAAAAGATGTA+AGG + chr4_4:64214983-64215002 None:intergenic 15.0%
!! TGTTGTATATTATATAAACA+CGG + chr4_4:64215071-64215090 None:intergenic 15.0%
!! TTAAGAAGAAATTAAAAAAC+AGG + chr4_4:64215390-64215409 None:intergenic 15.0%
!! AATATAACGATATATAGATT+TGG - chr4_4:64216694-64216713 Msa0694840:intron 15.0%
!! GTTAAGAAAAAAATATTCTT+GGG + chr4_4:64217151-64217170 None:intergenic 15.0%
!!! TCTGTAAATTTGTTTAAAAA+GGG + chr4_4:64219385-64219404 None:intergenic 15.0%
!!! TTCTGTAAATTTGTTTAAAA+AGG + chr4_4:64219386-64219405 None:intergenic 15.0%
!!! GAAAATGATTTTATTTTGTT+TGG - chr4_4:64219464-64219483 Msa0694840:intron 15.0%
!!! GATTGAAATTTGTGATTTTT+AGG + chr4_4:64213683-64213702 None:intergenic 20.0%
!! AAAATAGAAAGAGGATAATA+TGG + chr4_4:64213881-64213900 None:intergenic 20.0%
!!! GTTTTATGCTCTTAATTTTT+TGG - chr4_4:64213958-64213977 Msa0694840:CDS 20.0%
!!! AAGTTATTTTTTTCACTTGA+TGG + chr4_4:64214310-64214329 None:intergenic 20.0%
!! GTGTGTATATATTGTATTAT+AGG - chr4_4:64214629-64214648 Msa0694840:intron 20.0%
!!! ATTTACTCTTAGAAGTATAT+TGG - chr4_4:64214855-64214874 Msa0694840:intron 20.0%
!!! CTTTTTTATAATTTCAATCC+AGG - chr4_4:64214988-64215007 Msa0694840:intron 20.0%
!! TATCATATGAAATGTTATCA+GGG + chr4_4:64215295-64215314 None:intergenic 20.0%
!! ATATCATATGAAATGTTATC+AGG + chr4_4:64215296-64215315 None:intergenic 20.0%
!! AATTTCAAAATGACAAAAGT+TGG - chr4_4:64215464-64215483 Msa0694840:intron 20.0%
!!! ATTCCAAAACAAAACTATTT+TGG + chr4_4:64215629-64215648 None:intergenic 20.0%
!!! TTTTGTTTTGGAATTATTAG+AGG - chr4_4:64215635-64215654 Msa0694840:intron 20.0%
!!! TTTGTTTTGGAATTATTAGA+GGG - chr4_4:64215636-64215655 Msa0694840:intron 20.0%
!!! TGAATTTTGAGTAATGTTTA+AGG + chr4_4:64216041-64216060 None:intergenic 20.0%
!!! TGTGACTTTTATTTCAAATT+AGG + chr4_4:64216073-64216092 None:intergenic 20.0%
!! TAAAAAAATGACCCTTAAAA+CGG - chr4_4:64216474-64216493 Msa0694840:intron 20.0%
!!! ATTTTCATCTTTATATTCCT+GGG + chr4_4:64216927-64216946 None:intergenic 20.0%
!!! AATTTTCATCTTTATATTCC+TGG + chr4_4:64216928-64216947 None:intergenic 20.0%
!!! CTATAACTAACACTTTTATT+GGG + chr4_4:64217002-64217021 None:intergenic 20.0%
!!! ACTATAACTAACACTTTTAT+TGG + chr4_4:64217003-64217022 None:intergenic 20.0%
!! AATAAATTCATGGAAGTTAT+GGG - chr4_4:64217096-64217115 Msa0694840:intron 20.0%
!! GGTTAAGAAAAAAATATTCT+TGG + chr4_4:64217152-64217171 None:intergenic 20.0%
!! TTCTTAACCATTAACAAATA+TGG - chr4_4:64217163-64217182 Msa0694840:intron 20.0%
!! TCTTAACCATTAACAAATAT+GGG - chr4_4:64217164-64217183 Msa0694840:intron 20.0%
!!! CAATTTTGTGTCAATTTTTT+AGG - chr4_4:64217394-64217413 Msa0694840:intron 20.0%
!!! TTTGTTGTAATTTGTTTACT+AGG - chr4_4:64217453-64217472 Msa0694840:intron 20.0%
!!! TGTGTCCTTTTTTTTTTTTT+TGG - chr4_4:64218001-64218020 Msa0694840:intron 20.0%
!! GAGATCCAAAAAAAAAAAAA+AGG + chr4_4:64218009-64218028 None:intergenic 20.0%
!!! TTTTTTTTTGGATCTCTTAT+AGG - chr4_4:64218013-64218032 Msa0694840:intron 20.0%
!!! TTTTTTTTGGATCTCTTATA+GGG - chr4_4:64218014-64218033 Msa0694840:intron 20.0%
!! ATTTATATTCCATAAATGAC+AGG - chr4_4:64218106-64218125 Msa0694840:intron 20.0%
!! CTATATTATTGACAAGAAAA+CGG - chr4_4:64218155-64218174 Msa0694840:intron 20.0%
!! AAGTATATTTAAACGTGAAA+AGG - chr4_4:64219311-64219330 Msa0694840:intron 20.0%
!! AGTATATTTAAACGTGAAAA+GGG - chr4_4:64219312-64219331 Msa0694840:intron 20.0%
!!! ATTGAAATGATTATTTTCGT+TGG - chr4_4:64219565-64219584 Msa0694840:intron 20.0%
!!! TGCTTTTTTTAAAAAGTTCA+AGG - chr4_4:64219639-64219658 Msa0694840:intron 20.0%
!!! GCTTTTTTTAAAAAGTTCAA+GGG - chr4_4:64219640-64219659 Msa0694840:intron 20.0%
!!! CTTTTTTTAAAAAGTTCAAG+GGG - chr4_4:64219641-64219660 Msa0694840:intron 20.0%
!! TTTCTGCAAATAGTAAATTA+TGG - chr4_4:64220246-64220265 Msa0694840:intron 20.0%
! TTGATAGATTGATTGTTCTA+TGG + chr4_4:64213750-64213769 None:intergenic 25.0%
! AATCTATCAATTCAGAGAAA+TGG - chr4_4:64213760-64213779 Msa0694840:three_prime_UTR 25.0%
! ATCTATCAATTCAGAGAAAT+GGG - chr4_4:64213761-64213780 Msa0694840:three_prime_UTR 25.0%
! CAATTGAACAAAATAGAAAG+AGG + chr4_4:64213890-64213909 None:intergenic 25.0%
!!! GCTCTTAATTTTTTGGATTA+TGG - chr4_4:64213965-64213984 Msa0694840:CDS 25.0%
! GGATTATGGCTAAAATTATT+TGG - chr4_4:64213979-64213998 Msa0694840:CDS 25.0%
! GGCTAAAATTATTTGGATTA+AGG - chr4_4:64213986-64214005 Msa0694840:CDS 25.0%
!!! AGCTGTTTTAAAAGCTATTT+TGG - chr4_4:64214115-64214134 Msa0694840:CDS 25.0%
! AAAATTGAAATTCAAGCACA+GGG + chr4_4:64214353-64214372 None:intergenic 25.0%
!!! TGCTTTTTGACATTTGTTTT+TGG - chr4_4:64214374-64214393 Msa0694840:intron 25.0%
!!! GCTTTTTGACATTTGTTTTT+GGG - chr4_4:64214375-64214394 Msa0694840:intron 25.0%
! TTTGTGGAGAATTTCATAAA+TGG - chr4_4:64214539-64214558 Msa0694840:intron 25.0%
! TTGTGGAGAATTTCATAAAT+GGG - chr4_4:64214540-64214559 Msa0694840:intron 25.0%
!! TGGGTTATATGTATTTGTTT+TGG - chr4_4:64214559-64214578 Msa0694840:intron 25.0%
!!! GTTATATGTATTTGTTTTGG+AGG - chr4_4:64214562-64214581 Msa0694840:intron 25.0%
!! TAATTGTGTGAGATGTTTTA+AGG + chr4_4:64214782-64214801 None:intergenic 25.0%
! AGAGTACAAAAAGAAACAAA+AGG - chr4_4:64214809-64214828 Msa0694840:intron 25.0%
!! CTTCTAAGAGTAAATATGTA+AGG + chr4_4:64214850-64214869 None:intergenic 25.0%
! AAAAAACAGAATCAATGGAT+GGG + chr4_4:64214937-64214956 None:intergenic 25.0%
! TAAAAAACAGAATCAATGGA+TGG + chr4_4:64214938-64214957 None:intergenic 25.0%
! TGAGTAAAAAACAGAATCAA+TGG + chr4_4:64214942-64214961 None:intergenic 25.0%
!!! TTTATTTTTTGTAGCATTGC+CGG - chr4_4:64215419-64215438 Msa0694840:intron 25.0%
! CATGTTTAAAAATATGACTC+CGG + chr4_4:64215441-64215460 None:intergenic 25.0%
! TTGTACTAAAACTTGAAAGA+TGG + chr4_4:64215565-64215584 None:intergenic 25.0%
!!! AGACCAAAATAGTTTTGTTT+TGG - chr4_4:64215623-64215642 Msa0694840:intron 25.0%
!!! ACTTTTGTTACTTTAAGCTT+TGG + chr4_4:64216169-64216188 None:intergenic 25.0%
!!! TTGTTAATTTGTTAATTGGG+AGG + chr4_4:64216219-64216238 None:intergenic 25.0%
!! TTCACTTAAAACCGTTTTAA+GGG + chr4_4:64216488-64216507 None:intergenic 25.0%
!! TTTCACTTAAAACCGTTTTA+AGG + chr4_4:64216489-64216508 None:intergenic 25.0%
! GTTATATTTATTTGGAAGTG+CGG + chr4_4:64216682-64216701 None:intergenic 25.0%
! CAAATAATAAGTGAAGTTGA+GGG + chr4_4:64216767-64216786 None:intergenic 25.0%
! TCAAATAATAAGTGAAGTTG+AGG + chr4_4:64216768-64216787 None:intergenic 25.0%
!!! TTTTTGGAAAATCATCTCTA+TGG - chr4_4:64216793-64216812 Msa0694840:intron 25.0%
! AAAGATGAAAATTCAATTCC+TGG - chr4_4:64216935-64216954 Msa0694840:intron 25.0%
! GAATAAATTCATGGAAGTTA+TGG - chr4_4:64217095-64217114 Msa0694840:intron 25.0%
! AAAAATATTCTTGGGAGTAA+AGG + chr4_4:64217143-64217162 None:intergenic 25.0%
!! ACTATACCCATATTTGTTAA+TGG + chr4_4:64217173-64217192 None:intergenic 25.0%
! AAAAGGTTTGACTGATTAAA+GGG + chr4_4:64217340-64217359 None:intergenic 25.0%
! AAAAAGGTTTGACTGATTAA+AGG + chr4_4:64217341-64217360 None:intergenic 25.0%
! GACAAAGCATACAATAAAAA+AGG + chr4_4:64217357-64217376 None:intergenic 25.0%
! AGTAAGTCTAAACATTCAAA+AGG - chr4_4:64217595-64217614 Msa0694840:intron 25.0%
! ATAGTTGCATAATAGTTGAA+GGG + chr4_4:64217846-64217865 None:intergenic 25.0%
!! GGAATATAAATGAACCTTTT+TGG + chr4_4:64218097-64218116 None:intergenic 25.0%
!! TTCAATTTTTGCTTATAGCT+CGG + chr4_4:64218236-64218255 None:intergenic 25.0%
!! ACTTTCAAGTAAATATGAGA+AGG + chr4_4:64218335-64218354 None:intergenic 25.0%
! ATTGATTACAAAGAAGTTCA+AGG + chr4_4:64218717-64218736 None:intergenic 25.0%
! TCTTGATTGTATAAATTGCA+CGG - chr4_4:64218886-64218905 Msa0694840:intron 25.0%
! ATAGTTAATCGATAGGAAAT+TGG + chr4_4:64219135-64219154 None:intergenic 25.0%
! TTAAATATACTTATCCAAGG+CGG + chr4_4:64219303-64219322 None:intergenic 25.0%
! CGTTTAAATATACTTATCCA+AGG + chr4_4:64219306-64219325 None:intergenic 25.0%
! GCAACAAAAGATATTGAAAA+GGG + chr4_4:64219413-64219432 None:intergenic 25.0%
! AGCAACAAAAGATATTGAAA+AGG + chr4_4:64219414-64219433 None:intergenic 25.0%
! AAAGCAAATGGTTGAAAAAA+GGG + chr4_4:64219699-64219718 None:intergenic 25.0%
! TAAAGCAAATGGTTGAAAAA+AGG + chr4_4:64219700-64219719 None:intergenic 25.0%
! ATCTATTGATGTAAAGCAAA+TGG + chr4_4:64219711-64219730 None:intergenic 25.0%
! TTACAACCTTCAATTTATGT+TGG - chr4_4:64219779-64219798 Msa0694840:intron 25.0%
! TCAACAATTAACAAAACTGA+AGG + chr4_4:64219863-64219882 None:intergenic 25.0%
TCACAAATTTCAATCGAATC+AGG - chr4_4:64213688-64213707 Msa0694840:three_prime_UTR 30.0%
CACAAATTTCAATCGAATCA+GGG - chr4_4:64213689-64213708 Msa0694840:three_prime_UTR 30.0%
TCTATCAATTCAGAGAAATG+GGG - chr4_4:64213762-64213781 Msa0694840:three_prime_UTR 30.0%
AGAAAGAGGATAATATGGAA+GGG + chr4_4:64213876-64213895 None:intergenic 30.0%
TAGAAAGAGGATAATATGGA+AGG + chr4_4:64213877-64213896 None:intergenic 30.0%
AAACTCATGTAACAGCAATT+AGG + chr4_4:64213931-64213950 None:intergenic 30.0%
!! ATTTGGATTAAGGCTTTGTT+TGG - chr4_4:64213996-64214015 Msa0694840:CDS 30.0%
TCAAATAAGCCAATCCAAAT+AGG - chr4_4:64214241-64214260 Msa0694840:intron 30.0%
GAAAATTGAAATTCAAGCAC+AGG + chr4_4:64214354-64214373 None:intergenic 30.0%
TTTGGGTGTCAATATTTCAA+TGG - chr4_4:64214392-64214411 Msa0694840:intron 30.0%
! TATGAATTTCTTTTGGCGTT+TGG - chr4_4:64214505-64214524 Msa0694840:intron 30.0%
! ATGAATTTCTTTTGGCGTTT+GGG - chr4_4:64214506-64214525 Msa0694840:intron 30.0%
GACAAGAATAACAAATACCA+TGG + chr4_4:64214600-64214619 None:intergenic 30.0%
TATTGTTGTGTACATATGAG+AGG - chr4_4:64214882-64214901 Msa0694840:intron 30.0%
!!! AGGGGAGATATTTTAATGTA+GGG - chr4_4:64215246-64215265 Msa0694840:intron 30.0%
GGAGATGTGTTTATAAACTT+AGG + chr4_4:64215345-64215364 None:intergenic 30.0%
! AAAAACAGGTAAATTTTGCG+AGG + chr4_4:64215376-64215395 None:intergenic 30.0%
! TAAAATAGAGTTTTGCACCA+TGG - chr4_4:64215507-64215526 Msa0694840:intron 30.0%
!! TTTGTTACTTTAAGCTTTGG+AGG + chr4_4:64216166-64216185 None:intergenic 30.0%
ATGGAGAAGAGTAATAGTTA+GGG - chr4_4:64216441-64216460 Msa0694840:intron 30.0%
AGAAAACAAATAGAACTCCA+TGG - chr4_4:64217044-64217063 Msa0694840:intron 30.0%
GAAAACAAATAGAACTCCAT+GGG - chr4_4:64217045-64217064 Msa0694840:intron 30.0%
GAATTTATTCACATGTGAGA+AGG + chr4_4:64217085-64217104 None:intergenic 30.0%
CTCACATGTGAATAAATTCA+TGG - chr4_4:64217086-64217105 Msa0694840:intron 30.0%
AATGTGATTCCTAAACTTGA+AGG - chr4_4:64217208-64217227 Msa0694840:intron 30.0%
TAGGAAGAAGAACTGAAAAA+GGG - chr4_4:64217472-64217491 Msa0694840:intron 30.0%
! AAACATTCAAAAGGTATGTG+TGG - chr4_4:64217604-64217623 Msa0694840:intron 30.0%
! AAAAGGTATGTGTGGTTATT+TGG - chr4_4:64217612-64217631 Msa0694840:intron 30.0%
AGGTACTAGAAAAACACAAT+AGG + chr4_4:64217652-64217671 None:intergenic 30.0%
CATCATTAGAAACTGAGTAT+GGG + chr4_4:64217678-64217697 None:intergenic 30.0%
TCATCATTAGAAACTGAGTA+TGG + chr4_4:64217679-64217698 None:intergenic 30.0%
TATTCTACTATACAGACAAG+AGG - chr4_4:64217707-64217726 Msa0694840:intron 30.0%
ATTCTACTATACAGACAAGA+GGG - chr4_4:64217708-64217727 Msa0694840:intron 30.0%
!!! TTCCAACATTTACTTTTTCC+TGG - chr4_4:64217779-64217798 Msa0694840:intron 30.0%
TAGTTGCATAATAGTTGAAG+GGG + chr4_4:64217845-64217864 None:intergenic 30.0%
CATAGTTGCATAATAGTTGA+AGG + chr4_4:64217847-64217866 None:intergenic 30.0%
CATGGTTGCTGAAATATAAA+AGG + chr4_4:64217887-64217906 None:intergenic 30.0%
! CTTTTATATTTCAGCAACCA+TGG - chr4_4:64217885-64217904 Msa0694840:intron 30.0%
GATCTCTTATAGGGTAAATA+GGG - chr4_4:64218023-64218042 Msa0694840:intron 30.0%
CTTTCAACTTTCATCCAAAA+AGG - chr4_4:64218080-64218099 Msa0694840:intron 30.0%
AGTAGTTCCTGTATAACAAA+GGG - chr4_4:64218129-64218148 Msa0694840:intron 30.0%
! TCAATTTTTGCTTATAGCTC+GGG + chr4_4:64218235-64218254 None:intergenic 30.0%
GATAAAAACAGAGCTTCATA+AGG + chr4_4:64218408-64218427 None:intergenic 30.0%
AAGGAAGATGAAATCAATGT+GGG + chr4_4:64218462-64218481 None:intergenic 30.0%
TAAGGAAGATGAAATCAATG+TGG + chr4_4:64218463-64218482 None:intergenic 30.0%
ATGGCAGTTAGTGTTTATTA+AGG + chr4_4:64218481-64218500 None:intergenic 30.0%
! AGAAGTTCAAAGTTGGTTTA+GGG + chr4_4:64218505-64218524 None:intergenic 30.0%
! AAGAAGTTCAAAGTTGGTTT+AGG + chr4_4:64218506-64218525 None:intergenic 30.0%
TAAACCAACTTTGAACTTCT+TGG - chr4_4:64218505-64218524 Msa0694840:intron 30.0%
AACTTCTTGGTTGTAATGAT+GGG - chr4_4:64218518-64218537 Msa0694840:intron 30.0%
!! AATGATGGGTAAAACTAAAG+AGG - chr4_4:64218532-64218551 Msa0694840:intron 30.0%
AAGTTCAAGGAAATGAGAAA+TGG + chr4_4:64218704-64218723 None:intergenic 30.0%
!! AAACTTGGGAATATTGACTT+GGG + chr4_4:64218784-64218803 None:intergenic 30.0%
ACAATCAAGAACTTACTGAT+AGG + chr4_4:64218876-64218895 None:intergenic 30.0%
CTTGATTGTATAAATTGCAC+GGG - chr4_4:64218887-64218906 Msa0694840:intron 30.0%
! TTCCTATCGATTAACTATAG+TGG - chr4_4:64219137-64219156 Msa0694840:intron 30.0%
!!! CAATATCTTTTGTTGCTTTG+AGG - chr4_4:64219417-64219436 Msa0694840:intron 30.0%
TTCCCTTTCCTTCAAAATTT+AGG - chr4_4:64219612-64219631 Msa0694840:intron 30.0%
!! CTCCTAAATTTTGAAGGAAA+GGG + chr4_4:64219617-64219636 None:intergenic 30.0%
!! ACTCCTAAATTTTGAAGGAA+AGG + chr4_4:64219618-64219637 None:intergenic 30.0%
! AGCAAACTCCTAAATTTTGA+AGG + chr4_4:64219623-64219642 None:intergenic 30.0%
TGAAAAAAGGGAACGATAAT+AGG + chr4_4:64219687-64219706 None:intergenic 30.0%
TCACTTCCAACATAAATTGA+AGG + chr4_4:64219788-64219807 None:intergenic 30.0%
!!! TTCGCCTATCGAAATTTTTT+GGG - chr4_4:64220171-64220190 Msa0694840:intron 30.0%
ATGTCCCAAAAAATTTCGAT+AGG + chr4_4:64220178-64220197 None:intergenic 30.0%
!! TCAAGAAGTTTGTTGACTTT+AGG - chr4_4:64220339-64220358 Msa0694840:CDS 30.0%
TTGATTGATGTAGTGTGAAA+AGG - chr4_4:64220362-64220381 Msa0694840:CDS 30.0%
TGATTGATGTAGTGTGAAAA+GGG - chr4_4:64220363-64220382 Msa0694840:CDS 30.0%
TGATGTTTGAATAACACTTC+TGG - chr4_4:64220429-64220448 Msa0694840:five_prime_UTR 30.0%
TTGAATAACACTTCTGGATT+TGG - chr4_4:64220435-64220454 Msa0694840:five_prime_UTR 30.0%
CTGTTACATGAGTTTGTGTT+TGG - chr4_4:64213936-64213955 Msa0694840:exon 35.0%
! CTGTTTTCAGCTTATGTTCA+TGG + chr4_4:64214146-64214165 None:intergenic 35.0%
CATAAGCTGAAAACAGCATA+TGG - chr4_4:64214150-64214169 Msa0694840:CDS 35.0%
ATAAGTTCTGTGAGACTGTT+TGG + chr4_4:64214207-64214226 None:intergenic 35.0%
CAAGTTATCAAGGATACTTG+GGG + chr4_4:64214267-64214286 None:intergenic 35.0%
CCAAGTTATCAAGGATACTT+GGG + chr4_4:64214268-64214287 None:intergenic 35.0%
TCCAAGTTATCAAGGATACT+TGG + chr4_4:64214269-64214288 None:intergenic 35.0%
!! ACTTGATGGTTCTAGCTTTA+CGG + chr4_4:64214296-64214315 None:intergenic 35.0%
CATTATTCAAGCAGATGTGA+AGG + chr4_4:64214425-64214444 None:intergenic 35.0%
GAATTGAAACTTACTACGCA+TGG - chr4_4:64214447-64214466 Msa0694840:intron 35.0%
!!! TTTGGGTTGATATGGTTTTG+TGG - chr4_4:64214523-64214542 Msa0694840:intron 35.0%
!!! ATGTTTTAAGGCTAGCCAAA+CGG + chr4_4:64214770-64214789 None:intergenic 35.0%
AAACATCTCACACAATTACC+TGG - chr4_4:64214784-64214803 Msa0694840:intron 35.0%
AACATCTCACACAATTACCT+GGG - chr4_4:64214785-64214804 Msa0694840:intron 35.0%
! TTTCTTTTTGTACTCTTCCC+AGG + chr4_4:64214805-64214824 None:intergenic 35.0%
ATTTCAATCCAGGTCATTGT+TGG - chr4_4:64214998-64215017 Msa0694840:intron 35.0%
TTTCAATCCAGGTCATTGTT+GGG - chr4_4:64214999-64215018 Msa0694840:intron 35.0%
TTATTACAATGAGGTGCACA+TGG + chr4_4:64215099-64215118 None:intergenic 35.0%
ACCTCATTGTAATAAGTTCG+AGG - chr4_4:64215104-64215123 Msa0694840:intron 35.0%
TCCTCGAACTTATTACAATG+AGG + chr4_4:64215108-64215127 None:intergenic 35.0%
TCATTGTAATAAGTTCGAGG+AGG - chr4_4:64215107-64215126 Msa0694840:intron 35.0%
CATTGTAATAAGTTCGAGGA+GGG - chr4_4:64215108-64215127 Msa0694840:intron 35.0%
! GGTTTGTTTGGTTCAAACAA+GGG - chr4_4:64215222-64215241 Msa0694840:intron 35.0%
! GTTTGTTTGGTTCAAACAAG+GGG - chr4_4:64215223-64215242 Msa0694840:intron 35.0%
!!! GAGGGGAGATATTTTAATGT+AGG - chr4_4:64215245-64215264 Msa0694840:intron 35.0%
!!! GGGGAGATATTTTAATGTAG+GGG - chr4_4:64215247-64215266 Msa0694840:intron 35.0%
TCAAAATGACAAAAGTTGGC+TGG - chr4_4:64215468-64215487 Msa0694840:intron 35.0%
TAAGAACGCAGTTTACTTGT+TGG - chr4_4:64215533-64215552 Msa0694840:intron 35.0%
! TTTCAGGTCTCTTAAAGTAC+AGG + chr4_4:64215719-64215738 None:intergenic 35.0%
CAATTGATTAAGAGGAGTTG+AGG + chr4_4:64215759-64215778 None:intergenic 35.0%
GGAGGTTCTATTTCAAATGA+AGG + chr4_4:64215855-64215874 None:intergenic 35.0%
GATGGAGAAGAGTAATAGTT+AGG - chr4_4:64216440-64216459 Msa0694840:intron 35.0%
AAAATTAAGCGCTTGTCGAA+AGG - chr4_4:64216723-64216742 Msa0694840:intron 35.0%
ATAAGTGAAGTTGAGGGTAA+GGG + chr4_4:64216761-64216780 None:intergenic 35.0%
AATAAGTGAAGTTGAGGGTA+AGG + chr4_4:64216762-64216781 None:intergenic 35.0%
! ATTGAAGTTGACTCTTACGA+CGG + chr4_4:64216839-64216858 None:intergenic 35.0%
ATCACAATTACCAACTGAAG+AGG - chr4_4:64216857-64216876 Msa0694840:intron 35.0%
TCACAATTACCAACTGAAGA+GGG - chr4_4:64216858-64216877 Msa0694840:intron 35.0%
TTCCTGGGTAAGTTATTCTT+GGG + chr4_4:64216912-64216931 None:intergenic 35.0%
ATTCCTGGGTAAGTTATTCT+TGG + chr4_4:64216913-64216932 None:intergenic 35.0%
TTATTCACATGTGAGAAGGT+GGG + chr4_4:64217081-64217100 None:intergenic 35.0%
TTTATTCACATGTGAGAAGG+TGG + chr4_4:64217082-64217101 None:intergenic 35.0%
AAGTTTAGGAATCACATTCC+CGG + chr4_4:64217206-64217225 None:intergenic 35.0%
TGCTGATGATCTAATCCATA+GGG + chr4_4:64217241-64217260 None:intergenic 35.0%
ATGCTGATGATCTAATCCAT+AGG + chr4_4:64217242-64217261 None:intergenic 35.0%
CTAGGAAGAAGAACTGAAAA+AGG - chr4_4:64217471-64217490 Msa0694840:intron 35.0%
AGGAAGAAGAACTGAAAAAG+GGG - chr4_4:64217473-64217492 Msa0694840:intron 35.0%
AGATGCAGATAAGATGATGA+GGG - chr4_4:64217507-64217526 Msa0694840:intron 35.0%
TAGAAACTGAGTATGGGAAA+AGG + chr4_4:64217672-64217691 None:intergenic 35.0%
CTCCAGGAAAAAGTAAATGT+TGG + chr4_4:64217784-64217803 None:intergenic 35.0%
CAAATTAAACACTCTTCTCC+AGG + chr4_4:64217800-64217819 None:intergenic 35.0%
TATTTCAGCAACCATGGTAT+AGG - chr4_4:64217891-64217910 Msa0694840:intron 35.0%
GGATCTCTTATAGGGTAAAT+AGG - chr4_4:64218022-64218041 Msa0694840:intron 35.0%
GAGTAGTTCCTGTATAACAA+AGG - chr4_4:64218128-64218147 Msa0694840:intron 35.0%
! ATAGTCTCCCTTTGTTATAC+AGG + chr4_4:64218139-64218158 None:intergenic 35.0%
! CAATTTTTGCTTATAGCTCG+GGG + chr4_4:64218234-64218253 None:intergenic 35.0%
TGAGAAGGAAAGTTAGTTAG+AGG + chr4_4:64218320-64218339 None:intergenic 35.0%
!!! AGTTTGCCCCTTTTTTATTG+AGG - chr4_4:64218352-64218371 Msa0694840:intron 35.0%
!!! GTTTGCCCCTTTTTTATTGA+GGG - chr4_4:64218353-64218372 Msa0694840:intron 35.0%
CGATTCCCTCAATAAAAAAG+GGG + chr4_4:64218361-64218380 None:intergenic 35.0%
CCGATTCCCTCAATAAAAAA+GGG + chr4_4:64218362-64218381 None:intergenic 35.0%
!!! CCCTTTTTTATTGAGGGAAT+CGG - chr4_4:64218359-64218378 Msa0694840:intron 35.0%
AAATCTGATGGTTTGATGAG+TGG + chr4_4:64218433-64218452 None:intergenic 35.0%
! TTCAAAGTTGGTTTAGGGAA+TGG + chr4_4:64218500-64218519 None:intergenic 35.0%
ACAACCAAGAAGTTCAAAGT+TGG + chr4_4:64218512-64218531 None:intergenic 35.0%
GAACTTCTTGGTTGTAATGA+TGG - chr4_4:64218517-64218536 Msa0694840:intron 35.0%
!! AAACTAAAGAGGCACTAGTT+TGG - chr4_4:64218543-64218562 Msa0694840:intron 35.0%
! CAAACTTGGGAATATTGACT+TGG + chr4_4:64218785-64218804 None:intergenic 35.0%
CCTAATCATCACTCAAACTT+GGG + chr4_4:64218798-64218817 None:intergenic 35.0%
CCAAGTTTGAGTGATGATTA+GGG - chr4_4:64218796-64218815 Msa0694840:intron 35.0%
ATCAAGAACTTACTGATAGG+AGG + chr4_4:64218873-64218892 None:intergenic 35.0%
! TAATCTGAAAATGGCTTGGA+TGG + chr4_4:64218942-64218961 None:intergenic 35.0%
AGACTAATCTGAAAATGGCT+TGG + chr4_4:64218946-64218965 None:intergenic 35.0%
GGGATAGACTAATCTGAAAA+TGG + chr4_4:64218951-64218970 None:intergenic 35.0%
! CTGGAAATTATGGTTTTCTC+TGG - chr4_4:64218992-64219011 Msa0694840:intron 35.0%
GTCCACTATAGTTAATCGAT+AGG + chr4_4:64219142-64219161 None:intergenic 35.0%
GACATGTCCTATATAACAGT+TGG - chr4_4:64219159-64219178 Msa0694840:intron 35.0%
GAACAAGCCAACTGTTATAT+AGG + chr4_4:64219169-64219188 None:intergenic 35.0%
!! ATAACAGTTGGCTTGTTCAA+TGG - chr4_4:64219171-64219190 Msa0694840:intron 35.0%
! ATAGATTCGGTTAGAGTTGA+TGG + chr4_4:64219197-64219216 None:intergenic 35.0%
TTTAAAAAGGGTCAATCCGA+AGG + chr4_4:64219373-64219392 None:intergenic 35.0%
AAGTGACAAGACATTGGAAA+GGG + chr4_4:64219514-64219533 None:intergenic 35.0%
AAAGTGACAAGACATTGGAA+AGG + chr4_4:64219515-64219534 None:intergenic 35.0%
GTAACAAAGTGACAAGACAT+TGG + chr4_4:64219520-64219539 None:intergenic 35.0%
!! TGTCTTGTCACTTTGTTACA+AGG - chr4_4:64219521-64219540 Msa0694840:intron 35.0%
GAGAAGCTAGAGTTATAAGT+CGG + chr4_4:64219811-64219830 None:intergenic 35.0%
! CTTATAACTCTAGCTTCTCT+AGG - chr4_4:64219812-64219831 Msa0694840:intron 35.0%
! TGTAACTGATTCTGATTACC+TGG - chr4_4:64219837-64219856 Msa0694840:intron 35.0%
AATTAACAAAACTGAAGGCC+AGG + chr4_4:64219858-64219877 None:intergenic 35.0%
CATCAAAAAGATCAAAGTCC+AGG - chr4_4:64220066-64220085 Msa0694840:intron 35.0%
AAGTCAAAAAGCAAGGATTC+TGG - chr4_4:64220119-64220138 Msa0694840:intron 35.0%
AAAAATTTCGATAGGCGAAC+TGG + chr4_4:64220170-64220189 None:intergenic 35.0%
!!! GTTCGCCTATCGAAATTTTT+TGG - chr4_4:64220170-64220189 Msa0694840:intron 35.0%
!! GTTGATAGTGGTTGAATACT+TGG - chr4_4:64220203-64220222 Msa0694840:intron 35.0%
GATTGATGTAGTGTGAAAAG+GGG - chr4_4:64220364-64220383 Msa0694840:exon 35.0%
AGGAGCTATTATTTCAGAGT+GGG + chr4_4:64220469-64220488 None:intergenic 35.0%
AAGGAGCTATTATTTCAGAG+TGG + chr4_4:64220470-64220489 None:intergenic 35.0%
! CTCCTTTTCGTGATAACTTT+AGG - chr4_4:64220484-64220503 Msa0694840:five_prime_UTR 35.0%
AGCCTAAAGTTATCACGAAA+AGG + chr4_4:64220489-64220508 None:intergenic 35.0%
TTTAGGCTTATCCAAGAACA+AGG - chr4_4:64220501-64220520 Msa0694840:five_prime_UTR 35.0%
CTTATACACAAGCGCTAATC+AGG + chr4_4:64214048-64214067 None:intergenic 40.0%
! CCCAAGTATCCTTGATAACT+TGG - chr4_4:64214265-64214284 Msa0694840:intron 40.0%
! ACGGCTTTTCCAAGTTATCA+AGG + chr4_4:64214277-64214296 None:intergenic 40.0%
!!! TTTTGGCGTTTGGGTTGATA+TGG - chr4_4:64214515-64214534 Msa0694840:intron 40.0%
GCTTTATGATGCTCGAATGT+TGG - chr4_4:64214660-64214679 Msa0694840:intron 40.0%
TTCCTGTACCGTTATTGATG+AGG - chr4_4:64214696-64214715 Msa0694840:intron 40.0%
GTTCATTTCATTCACCAGAG+TGG - chr4_4:64214736-64214755 Msa0694840:intron 40.0%
!!! TGTTTTAAGGCTAGCCAAAC+GGG + chr4_4:64214769-64214788 None:intergenic 40.0%
TTCAGGACTGATCAGACATA+TGG + chr4_4:64215170-64215189 None:intergenic 40.0%
CCAAACTTCAGACACAATTC+AGG + chr4_4:64215187-64215206 None:intergenic 40.0%
! CCTGAATTGTGTCTGAAGTT+TGG - chr4_4:64215184-64215203 Msa0694840:intron 40.0%
!! AGTTTGGCTTTACTTCTGCA+AGG - chr4_4:64215200-64215219 Msa0694840:intron 40.0%
!! GTTTGGCTTTACTTCTGCAA+GGG - chr4_4:64215201-64215220 Msa0694840:intron 40.0%
! TACTTCTGCAAGGGTTTGTT+TGG - chr4_4:64215210-64215229 Msa0694840:intron 40.0%
! GGGTTTGTTTGGTTCAAACA+AGG - chr4_4:64215221-64215240 Msa0694840:intron 40.0%
! AACAGGTAAATTTTGCGAGG+AGG + chr4_4:64215373-64215392 None:intergenic 40.0%
AAACTGCGTTCTTACAACCA+TGG + chr4_4:64215527-64215546 None:intergenic 40.0%
TCTTGCAGTGTAACAATCGT+CGG + chr4_4:64215606-64215625 None:intergenic 40.0%
!! GAGAAAGTCTTGTTGTGTGA+CGG - chr4_4:64215665-64215684 Msa0694840:intron 40.0%
!! AGAAAGTCTTGTTGTGTGAC+GGG - chr4_4:64215666-64215685 Msa0694840:intron 40.0%
TTAAGAGGAGTTGAGGCAAA+GGG + chr4_4:64215752-64215771 None:intergenic 40.0%
ATTAAGAGGAGTTGAGGCAA+AGG + chr4_4:64215753-64215772 None:intergenic 40.0%
!! GGGAGTGTCAATTGATTAAG+AGG + chr4_4:64215767-64215786 None:intergenic 40.0%
AAGGATCAAGTAGAGAGAAG+GGG + chr4_4:64215787-64215806 None:intergenic 40.0%
CAAGGATCAAGTAGAGAGAA+GGG + chr4_4:64215788-64215807 None:intergenic 40.0%
ACAAGGATCAAGTAGAGAGA+AGG + chr4_4:64215789-64215808 None:intergenic 40.0%
AGAACAAGTCTGAGAATGAG+AGG + chr4_4:64215829-64215848 None:intergenic 40.0%
! TCTCATTCTCAGACTTGTTC+TGG - chr4_4:64215828-64215847 Msa0694840:intron 40.0%
! CTCATTCTCAGACTTGTTCT+GGG - chr4_4:64215829-64215848 Msa0694840:intron 40.0%
TACAATCAAGAGACGAAGAG+AGG - chr4_4:64216265-64216284 Msa0694840:intron 40.0%
GAAGAGAGGAGAACAAAGAT+GGG - chr4_4:64216279-64216298 Msa0694840:intron 40.0%
TGAGATGTGAAGAGAAGAGA+TGG - chr4_4:64216321-64216340 Msa0694840:intron 40.0%
GAGATGTGAAGAGAAGAGAT+GGG - chr4_4:64216322-64216341 Msa0694840:intron 40.0%
AGAGATGATGAGATGAGAAG+AGG - chr4_4:64216356-64216375 Msa0694840:intron 40.0%
CTGCAAACACAACTTCTTCA+TGG + chr4_4:64216404-64216423 None:intergenic 40.0%
TGTGTTTGCAGCTGTGTATT+TGG - chr4_4:64216413-64216432 Msa0694840:CDS 40.0%
!! AGCTGTGTATTTGGTTCTGA+TGG - chr4_4:64216422-64216441 Msa0694840:intron 40.0%
! TTGAAGTTGACTCTTACGAC+GGG + chr4_4:64216838-64216857 None:intergenic 40.0%
TTCCCAAGAATAACTTACCC+AGG - chr4_4:64216907-64216926 Msa0694840:intron 40.0%
TATTCACATGTGAGAAGGTG+GGG + chr4_4:64217080-64217099 None:intergenic 40.0%
GGGTATAGTCATTCACTTAC+CGG - chr4_4:64217184-64217203 Msa0694840:intron 40.0%
GGTATAGTCATTCACTTACC+GGG - chr4_4:64217185-64217204 Msa0694840:intron 40.0%
CTGATGATCTAATCCATAGG+GGG + chr4_4:64217239-64217258 None:intergenic 40.0%
GCTGATGATCTAATCCATAG+GGG + chr4_4:64217240-64217259 None:intergenic 40.0%
GGAAGAAGAACTGAAAAAGG+GGG - chr4_4:64217474-64217493 Msa0694840:intron 40.0%
CAGATGCAGATAAGATGATG+AGG - chr4_4:64217506-64217525 Msa0694840:intron 40.0%
! ATAAGATGATGAGGGAGTAC+AGG - chr4_4:64217515-64217534 Msa0694840:intron 40.0%
! TAAGATGATGAGGGAGTACA+GGG - chr4_4:64217516-64217535 Msa0694840:intron 40.0%
ACTAGAGTGATTTCTACCCT+GGG + chr4_4:64217575-64217594 None:intergenic 40.0%
TACTAGAGTGATTTCTACCC+TGG + chr4_4:64217576-64217595 None:intergenic 40.0%
GCATAGCAGCAGAAAAAGAA+AGG - chr4_4:64217747-64217766 Msa0694840:intron 40.0%
ATTATGCAACTATGCTCTGC+TGG - chr4_4:64217853-64217872 Msa0694840:intron 40.0%
CCATAACTAGTCCTATACCA+TGG + chr4_4:64217905-64217924 None:intergenic 40.0%
!! CCATGGTATAGGACTAGTTA+TGG - chr4_4:64217902-64217921 Msa0694840:intron 40.0%
GAAAGTCGCTGACAAATTAG+AGG + chr4_4:64218065-64218084 None:intergenic 40.0%
! GGAACTACTCCTGTCATTTA+TGG + chr4_4:64218118-64218137 None:intergenic 40.0%
CCATAGGAATTTACCTTGCA+GGG + chr4_4:64218211-64218230 None:intergenic 40.0%
ATCTACAACACAAAGTCCAG+AGG + chr4_4:64218284-64218303 None:intergenic 40.0%
! GCCGATTCCCTCAATAAAAA+AGG + chr4_4:64218363-64218382 None:intergenic 40.0%
CCCTAATGGTCTACTTATGT+GGG + chr4_4:64218385-64218404 None:intergenic 40.0%
CCCACATAAGTAGACCATTA+GGG - chr4_4:64218382-64218401 Msa0694840:intron 40.0%
AAGATGAAATCAATGTGGGC+TGG + chr4_4:64218458-64218477 None:intergenic 40.0%
TAGCTCCACTATCAATGAGT+GGG - chr4_4:64218584-64218603 Msa0694840:intron 40.0%
CTTTACATATGGCCTCTTCA+AGG + chr4_4:64218648-64218667 None:intergenic 40.0%
! AGAGGTGCACTCTTTACATA+TGG + chr4_4:64218659-64218678 None:intergenic 40.0%
! TATGTAAAGAGTGCACCTCT+TGG - chr4_4:64218659-64218678 Msa0694840:intron 40.0%
CAGTGTAATGAATGTCCAAG+AGG + chr4_4:64218677-64218696 None:intergenic 40.0%
AATTGCTGACAACTACTCCT+TGG - chr4_4:64218734-64218753 Msa0694840:intron 40.0%
ATTGCTGACAACTACTCCTT+GGG - chr4_4:64218735-64218754 Msa0694840:intron 40.0%
!! ATTGACTTGGGAAAGGATGA+GGG + chr4_4:64218772-64218791 None:intergenic 40.0%
!! TATTGACTTGGGAAAGGATG+AGG + chr4_4:64218773-64218792 None:intergenic 40.0%
!! TGGGAATATTGACTTGGGAA+AGG + chr4_4:64218779-64218798 None:intergenic 40.0%
CCCAAGTTTGAGTGATGATT+AGG - chr4_4:64218795-64218814 Msa0694840:intron 40.0%
CCCTAATCATCACTCAAACT+TGG + chr4_4:64218799-64218818 None:intergenic 40.0%
ACTTACTGATAGGAGGAATG+AGG + chr4_4:64218866-64218885 None:intergenic 40.0%
! CCAACGGGAAATTTTCTTAG+AGG + chr4_4:64218913-64218932 None:intergenic 40.0%
! CCTCTAAGAAAATTTCCCGT+TGG - chr4_4:64218910-64218929 Msa0694840:intron 40.0%
! TTATGGTTTTCTCTGGACGT+AGG - chr4_4:64218999-64219018 Msa0694840:intron 40.0%
! TATGGTTTTCTCTGGACGTA+GGG - chr4_4:64219000-64219019 Msa0694840:intron 40.0%
TAGAATGTGGGAATATCCCA+TGG - chr4_4:64219057-64219076 Msa0694840:intron 40.0%
GAGGATCGAAGGAATAGATT+CGG + chr4_4:64219210-64219229 None:intergenic 40.0%
!!! TCTTTTGTTGCTTTGAGGTC+TGG - chr4_4:64219422-64219441 Msa0694840:intron 40.0%
!! TGTCACTTTGTTACAAGGTC+TGG - chr4_4:64219526-64219545 Msa0694840:intron 40.0%
GTTACAAGGTCTGGAAGAAA+CGG - chr4_4:64219535-64219554 Msa0694840:intron 40.0%
GGGAACGATAATAGGACAAA+AGG + chr4_4:64219679-64219698 None:intergenic 40.0%
GATCTTCTTGAATGCTGCAA+TGG + chr4_4:64219984-64220003 None:intergenic 40.0%
AGAGTATGAGGATGATGAAG+AGG + chr4_4:64220021-64220040 None:intergenic 40.0%
! TTCACTACTGGAAGAGTATG+AGG + chr4_4:64220033-64220052 None:intergenic 40.0%
GAAGCACAAGTCAAAAAGCA+AGG - chr4_4:64220112-64220131 Msa0694840:intron 40.0%
ATCGAATCAGGGTCTAACTG+TGG - chr4_4:64213700-64213719 Msa0694840:three_prime_UTR 45.0%
ACAAAGCTATGCAGAGAGCA+AGG - chr4_4:64213798-64213817 Msa0694840:three_prime_UTR 45.0%
ATGCCATCTTCAACCTCATC+GGG + chr4_4:64213845-64213864 None:intergenic 45.0%
CATGCCATCTTCAACCTCAT+CGG + chr4_4:64213846-64213865 None:intergenic 45.0%
TACTTGGGGCCTATTTGGAT+TGG + chr4_4:64214253-64214272 None:intergenic 45.0%
AAGGATACTTGGGGCCTATT+TGG + chr4_4:64214258-64214277 None:intergenic 45.0%
GTCCTCATCAATAACGGTAC+AGG + chr4_4:64214701-64214720 None:intergenic 45.0%
GCGACAGTCCTCATCAATAA+CGG + chr4_4:64214707-64214726 None:intergenic 45.0%
TTATTGATGAGGACTGTCGC+AGG - chr4_4:64214707-64214726 Msa0694840:intron 45.0%
TGTGTACATATGAGAGGCAG+AGG - chr4_4:64214888-64214907 Msa0694840:intron 45.0%
GTGTACATATGAGAGGCAGA+GGG - chr4_4:64214889-64214908 Msa0694840:intron 45.0%
TGTACATATGAGAGGCAGAG+GGG - chr4_4:64214890-64214909 Msa0694840:intron 45.0%
GTACAAACCCAACAATGACC+TGG + chr4_4:64215009-64215028 None:intergenic 45.0%
CATATGGAGCAGAGGGTAAA+TGG + chr4_4:64215154-64215173 None:intergenic 45.0%
GATCAGACATATGGAGCAGA+GGG + chr4_4:64215161-64215180 None:intergenic 45.0%
TGATCAGACATATGGAGCAG+AGG + chr4_4:64215162-64215181 None:intergenic 45.0%
! TGTTTGGTTCAAACAAGGGG+AGG - chr4_4:64215226-64215245 Msa0694840:intron 45.0%
! GTTTGGTTCAAACAAGGGGA+GGG - chr4_4:64215227-64215246 Msa0694840:intron 45.0%
! TTTGGTTCAAACAAGGGGAG+GGG - chr4_4:64215228-64215247 Msa0694840:intron 45.0%
! AAATTTTGCGAGGAGGAGAG+AGG + chr4_4:64215366-64215385 None:intergenic 45.0%
!! AAAGGGGGTAAAGGTGTTTC+AGG + chr4_4:64215735-64215754 None:intergenic 45.0%
TAAGAGGAGTTGAGGCAAAG+GGG + chr4_4:64215751-64215770 None:intergenic 45.0%
GTCTGAGAATGAGAGGTTGA+GGG + chr4_4:64215822-64215841 None:intergenic 45.0%
AGTCTGAGAATGAGAGGTTG+AGG + chr4_4:64215823-64215842 None:intergenic 45.0%
CTGTTGTCAAAGCGGAAATG+CGG - chr4_4:64215908-64215927 Msa0694840:intron 45.0%
!! GCTTTGGAGGCTTAAAGTGT+TGG + chr4_4:64216153-64216172 None:intergenic 45.0%
CGAAGAGAGGAGAACAAAGA+TGG - chr4_4:64216278-64216297 Msa0694840:intron 45.0%
GATGAGATGAGAAGAGGAGA+TGG - chr4_4:64216362-64216381 Msa0694840:intron 45.0%
ATTAAGCGCTTGTCGAAAGG+TGG - chr4_4:64216726-64216745 Msa0694840:intron 45.0%
AAACAAACGCCCTCTTCAGT+TGG + chr4_4:64216870-64216889 None:intergenic 45.0%
ATGGGAAGTTATCCCATTCC+AGG - chr4_4:64217114-64217133 Msa0694840:intron 45.0%
TGGGAAGTTATCCCATTCCA+GGG - chr4_4:64217115-64217134 Msa0694840:intron 45.0%
GAGTAAAGGTTCCCTGGAAT+GGG + chr4_4:64217129-64217148 None:intergenic 45.0%
CCCTGCAAGGTAAATTCCTA+TGG - chr4_4:64218208-64218227 Msa0694840:intron 45.0%
GCCATAGGAATTTACCTTGC+AGG + chr4_4:64218212-64218231 None:intergenic 45.0%
ATATAACCCCTTCTTGCCTC+TGG - chr4_4:64218265-64218284 Msa0694840:intron 45.0%
ACAAAGTCCAGAGGCAAGAA+GGG + chr4_4:64218275-64218294 None:intergenic 45.0%
GCCCACATAAGTAGACCATT+AGG - chr4_4:64218381-64218400 Msa0694840:intron 45.0%
GCCCTAATGGTCTACTTATG+TGG + chr4_4:64218386-64218405 None:intergenic 45.0%
AGAGCTTCATAAGGCCCTAA+TGG + chr4_4:64218399-64218418 None:intergenic 45.0%
!! CTAAAGAGGCACTAGTTTGG+CGG - chr4_4:64218546-64218565 Msa0694840:intron 45.0%
CTAGCTCCACTATCAATGAG+TGG - chr4_4:64218583-64218602 Msa0694840:intron 45.0%
GGATACCCACTCATTGATAG+TGG + chr4_4:64218592-64218611 None:intergenic 45.0%
AAAGGATGAGGGAGAATGAC+TGG + chr4_4:64218761-64218780 None:intergenic 45.0%
!! GTGATGATTAGGGCACTGAT+TGG - chr4_4:64218806-64218825 Msa0694840:intron 45.0%
! CTGAAAATGGCTTGGATGGA+AGG + chr4_4:64218938-64218957 None:intergenic 45.0%
CATAATTTCCAGCCCCAACA+AGG + chr4_4:64218984-64219003 None:intergenic 45.0%
CTTGTTGGGGCTGGAAATTA+TGG - chr4_4:64218982-64219001 Msa0694840:intron 45.0%
TTGCCATGCGACTAGAATGT+GGG - chr4_4:64219045-64219064 Msa0694840:intron 45.0%
ATTCCCACATTCTAGTCGCA+TGG + chr4_4:64219051-64219070 None:intergenic 45.0%
AGAGTTCACCAACTTGGCAA+GGG + chr4_4:64219094-64219113 None:intergenic 45.0%
AAGAGTTCACCAACTTGGCA+AGG + chr4_4:64219095-64219114 None:intergenic 45.0%
!! TTGCCAAGTTGGTGAACTCT+TGG - chr4_4:64219094-64219113 Msa0694840:intron 45.0%
!! TGCCAAGTTGGTGAACTCTT+GGG - chr4_4:64219095-64219114 Msa0694840:intron 45.0%
TACCCAAGAGTTCACCAACT+TGG + chr4_4:64219100-64219119 None:intergenic 45.0%
TAGTACAAGGGGCTCTTTCT+CGG + chr4_4:64219232-64219251 None:intergenic 45.0%
ATGCCCGATGACTAGTACAA+GGG + chr4_4:64219244-64219263 None:intergenic 45.0%
AATCCGAAGGACCTTGGATT+GGG + chr4_4:64219360-64219379 None:intergenic 45.0%
TTGAGGTCTGGAAGAAATCG+AGG - chr4_4:64219434-64219453 Msa0694840:intron 45.0%
CTTGAATGCTGCAATGGAAG+AGG + chr4_4:64219978-64219997 None:intergenic 45.0%
GATGATGAAGAGGAGCTAGA+TGG + chr4_4:64220011-64220030 None:intergenic 45.0%
TCTCTCTTCGTCTTCACTAC+TGG + chr4_4:64220045-64220064 None:intergenic 45.0%
GATCAAAGTCCAGGTCTAAG+CGG - chr4_4:64220075-64220094 Msa0694840:intron 45.0%
! TCTGGAACCGATAGTGAAGA+TGG - chr4_4:64220137-64220156 Msa0694840:intron 45.0%
!! GGGACATCAAGAGTTGATAG+TGG - chr4_4:64220191-64220210 Msa0694840:intron 45.0%
GCTTATCCAAGAACAAGGTC+TGG - chr4_4:64220506-64220525 Msa0694840:five_prime_UTR 45.0%
TCATAGCCAGACCTTGTTCT+TGG + chr4_4:64220515-64220534 None:intergenic 45.0%
!!! ATTATTTTTTTTTAAATGTT+TGG - chr4_4:64216960-64216979 Msa0694840:intron 5.0%
!!! TTTTTTTTTTTTATATTACT+CGG + chr4_4:64220569-64220588 None:intergenic 5.0%
TTGCAATGTGCGAACGAAGC+TGG + chr4_4:64213639-64213658 None:intergenic 50.0%
GAATCAGGGTCTAACTGTGG+TGG - chr4_4:64213703-64213722 Msa0694840:three_prime_UTR 50.0%
CGATGAGGTTGAAGATGGCA+TGG - chr4_4:64213844-64213863 Msa0694840:three_prime_UTR 50.0%
GGAGGAAATGCTTCTCACCA+TGG - chr4_4:64214580-64214599 Msa0694840:intron 50.0%
CAGTGTAACAATCGTCGGCA+TGG + chr4_4:64215601-64215620 None:intergenic 50.0%
AGTTGAGGCAAAGGGGGTAA+AGG + chr4_4:64215744-64215763 None:intergenic 50.0%
AAGAGGAGTTGAGGCAAAGG+GGG + chr4_4:64215750-64215769 None:intergenic 50.0%
!! TTGAGGGCATCTGTGTCACA+AGG + chr4_4:64215806-64215825 None:intergenic 50.0%
CACACACAGAGATCAAGAGG+AGG + chr4_4:64215873-64215892 None:intergenic 50.0%
ACGCACACACAGAGATCAAG+AGG + chr4_4:64215876-64215895 None:intergenic 50.0%
GGTGCACTCTGTTGTCAAAG+CGG - chr4_4:64215900-64215919 Msa0694840:intron 50.0%
CTACGCGTCAATTTCTTGGG+TGG + chr4_4:64215939-64215958 None:intergenic 50.0%
CCGCTACGCGTCAATTTCTT+GGG + chr4_4:64215942-64215961 None:intergenic 50.0%
CCCAAGAAATTGACGCGTAG+CGG - chr4_4:64215939-64215958 Msa0694840:intron 50.0%
CCAAGAAATTGACGCGTAGC+GGG - chr4_4:64215940-64215959 Msa0694840:intron 50.0%
! CAAGGTAGAGCGTTTGGAGA+AGG + chr4_4:64216574-64216593 None:intergenic 50.0%
CTTCTCCAAACGCTCTACCT+TGG - chr4_4:64216572-64216591 Msa0694840:CDS 50.0%
!!! GCGTCGCGTTTTACTGGTTT+TGG - chr4_4:64216601-64216620 Msa0694840:CDS 50.0%
TTGTCAATAGCAGCCGCTAC+CGG + chr4_4:64216643-64216662 None:intergenic 50.0%
GCTGCTATTGACAACAGAGG+TGG - chr4_4:64216649-64216668 Msa0694840:CDS 50.0%
TGAAGTTGAGGGTAAGGGCA+GGG + chr4_4:64216756-64216775 None:intergenic 50.0%
! AGTTGACTCTTACGACGGGA+AGG + chr4_4:64216834-64216853 None:intergenic 50.0%
GGAGTAAAGGTTCCCTGGAA+TGG + chr4_4:64217130-64217149 None:intergenic 50.0%
TCTTGGGAGTAAAGGTTCCC+TGG + chr4_4:64217135-64217154 None:intergenic 50.0%
! GGGGCGTTTCCTTCAAGTTT+AGG + chr4_4:64217220-64217239 None:intergenic 50.0%
AGAACTGAAAAAGGGGGAGC+TGG - chr4_4:64217480-64217499 Msa0694840:intron 50.0%
AAGAGCAAATGCTCCCTGCA+AGG - chr4_4:64218195-64218214 Msa0694840:intron 50.0%
CAAAGTCCAGAGGCAAGAAG+GGG + chr4_4:64218274-64218293 None:intergenic 50.0%
CACAAAGTCCAGAGGCAAGA+AGG + chr4_4:64218276-64218295 None:intergenic 50.0%
!! TGTGGGCTGGACAAATCTGA+TGG + chr4_4:64218445-64218464 None:intergenic 50.0%
CTCTTCAAGGACAGTGAAGG+TGG + chr4_4:64218635-64218654 None:intergenic 50.0%
CACCTTCACTGTCCTTGAAG+AGG - chr4_4:64218633-64218652 Msa0694840:intron 50.0%
!! GATTAGGGCACTGATTGGTG+AGG - chr4_4:64218811-64218830 Msa0694840:intron 50.0%
CTTGGATGGAAGGAACCAAC+GGG + chr4_4:64218928-64218947 None:intergenic 50.0%
GCTTGGATGGAAGGAACCAA+CGG + chr4_4:64218929-64218948 None:intergenic 50.0%
TCCCTGATGTTCCTCCTTGT+TGG - chr4_4:64218967-64218986 Msa0694840:intron 50.0%
CCCAACAAGGAGGAACATCA+GGG + chr4_4:64218971-64218990 None:intergenic 50.0%
CCCTGATGTTCCTCCTTGTT+GGG - chr4_4:64218968-64218987 Msa0694840:intron 50.0%
CCTGATGTTCCTCCTTGTTG+GGG - chr4_4:64218969-64218988 Msa0694840:intron 50.0%
AATTTCCAGCCCCAACAAGG+AGG + chr4_4:64218981-64219000 None:intergenic 50.0%
GTTGCCATGCGACTAGAATG+TGG - chr4_4:64219044-64219063 Msa0694840:intron 50.0%
! AAGGGCATGGCAACTACCAT+GGG + chr4_4:64219076-64219095 None:intergenic 50.0%
GAGCCCCTTGTACTAGTCAT+CGG - chr4_4:64219237-64219256 Msa0694840:intron 50.0%
AGCCCCTTGTACTAGTCATC+GGG - chr4_4:64219238-64219257 Msa0694840:intron 50.0%
TGCCCGATGACTAGTACAAG+GGG + chr4_4:64219243-64219262 None:intergenic 50.0%
CATGCCCGATGACTAGTACA+AGG + chr4_4:64219245-64219264 None:intergenic 50.0%
CTTGTACTAGTCATCGGGCA+TGG - chr4_4:64219243-64219262 Msa0694840:intron 50.0%
TACTAGTCATCGGGCATGGA+TGG - chr4_4:64219247-64219266 Msa0694840:intron 50.0%
!! GGGCATGGATGGATTTTGAG+TGG - chr4_4:64219258-64219277 Msa0694840:intron 50.0%
TTCACTACACAGTTCCGCCT+TGG - chr4_4:64219286-64219305 Msa0694840:intron 50.0%
! GGGATGGAGACTGTCATTTC+AGG + chr4_4:64219340-64219359 None:intergenic 50.0%
ACAGTCTCCATCCCAATCCA+AGG - chr4_4:64219346-64219365 Msa0694840:CDS 50.0%
CATCCCAATCCAAGGTCCTT+CGG - chr4_4:64219354-64219373 Msa0694840:CDS 50.0%
CAATCCGAAGGACCTTGGAT+TGG + chr4_4:64219361-64219380 None:intergenic 50.0%
ACAAGGTCTGGAAGAAACGG+AGG - chr4_4:64219538-64219557 Msa0694840:intron 50.0%
CTTCTTTGACCGCTTAGACC+TGG + chr4_4:64220087-64220106 None:intergenic 50.0%
CAGGTCTAAGCGGTCAAAGA+AGG - chr4_4:64220085-64220104 Msa0694840:intron 50.0%
GGAACCGATAGTGAAGATGG+TGG - chr4_4:64220140-64220159 Msa0694840:intron 50.0%
! ACCGATAGTGAAGATGGTGG+CGG - chr4_4:64220143-64220162 Msa0694840:intron 50.0%
TCCGCCACCATCTTCACTAT+CGG + chr4_4:64220147-64220166 None:intergenic 50.0%
GCTATGCAGAGAGCAAGGCT+CGG - chr4_4:64213803-64213822 Msa0694840:three_prime_UTR 55.0%
TTCAACCTCATCGGGACCAC+CGG + chr4_4:64213837-64213856 None:intergenic 55.0%
GGTCCCGATGAGGTTGAAGA+TGG - chr4_4:64213839-64213858 Msa0694840:three_prime_UTR 55.0%
TTGATGAGGACTGTCGCAGG+TGG - chr4_4:64214710-64214729 Msa0694840:intron 55.0%
TGAGAGGCAGAGGGGAGATA+TGG - chr4_4:64214898-64214917 Msa0694840:intron 55.0%
!! TGTTGTGTGACGGGTTGAGC+TGG - chr4_4:64215675-64215694 Msa0694840:intron 55.0%
!! GTTGTGTGACGGGTTGAGCT+GGG - chr4_4:64215676-64215695 Msa0694840:intron 55.0%
GTTGAGCTGGGTGATCGATG+TGG - chr4_4:64215688-64215707 Msa0694840:intron 55.0%
GATCTCTGTGTGTGCGTGTG+TGG - chr4_4:64215879-64215898 Msa0694840:intron 55.0%
CCCGCTACGCGTCAATTTCT+TGG + chr4_4:64215943-64215962 None:intergenic 55.0%
TATAAAGCGGGCGCGATTGC+AGG + chr4_4:64216526-64216545 None:intergenic 55.0%
CGCGATTGCGGGTATAAAGC+GGG + chr4_4:64216538-64216557 None:intergenic 55.0%
GCGCGATTGCGGGTATAAAG+CGG + chr4_4:64216539-64216558 None:intergenic 55.0%
TTTGGAGAAGGCGGCTGAAG+CGG + chr4_4:64216562-64216581 None:intergenic 55.0%
! GGTAGAGCGTTTGGAGAAGG+CGG + chr4_4:64216571-64216590 None:intergenic 55.0%
! GCACTCCAAGGTAGAGCGTT+TGG + chr4_4:64216580-64216599 None:intergenic 55.0%
! AGTGCTGCGTCGCGTTTTAC+TGG - chr4_4:64216595-64216614 Msa0694840:CDS 55.0%
GCGGCTGCTATTGACAACAG+AGG - chr4_4:64216646-64216665 Msa0694840:CDS 55.0%
GTGAAGTTGAGGGTAAGGGC+AGG + chr4_4:64216757-64216776 None:intergenic 55.0%
CTTGAAGGAAACGCCCCCTA+TGG - chr4_4:64217223-64217242 Msa0694840:intron 55.0%
AGGGCTCGCAAACTTTCCCA+GGG - chr4_4:64217556-64217575 Msa0694840:intron 55.0%
TGCTTATAGCTCGGGGCCAT+AGG + chr4_4:64218227-64218246 None:intergenic 55.0%
! GACGTGGAAGGATGACTTGG+AGG + chr4_4:64218613-64218632 None:intergenic 55.0%
GTGGACGTGGAAGGATGACT+TGG + chr4_4:64218616-64218635 None:intergenic 55.0%
ACAGTGAAGGTGGACGTGGA+AGG + chr4_4:64218625-64218644 None:intergenic 55.0%
AAGGACAGTGAAGGTGGACG+TGG + chr4_4:64218629-64218648 None:intergenic 55.0%
GGCCTCTTCAAGGACAGTGA+AGG + chr4_4:64218638-64218657 None:intergenic 55.0%
CCCCAACAAGGAGGAACATC+AGG + chr4_4:64218972-64218991 None:intergenic 55.0%
ATGTTCCTCCTTGTTGGGGC+TGG - chr4_4:64218973-64218992 Msa0694840:intron 55.0%
! CAAGGGCATGGCAACTACCA+TGG + chr4_4:64219077-64219096 None:intergenic 55.0%
TTGCCATGCCCTTGCCAAGT+TGG - chr4_4:64219083-64219102 Msa0694840:intron 55.0%
TCACCAACTTGGCAAGGGCA+TGG + chr4_4:64219089-64219108 None:intergenic 55.0%
GCTCTTTCTCGGAGGATCGA+AGG + chr4_4:64219221-64219240 None:intergenic 55.0%
TACAAGGGGCTCTTTCTCGG+AGG + chr4_4:64219229-64219248 None:intergenic 55.0%
! CGAAGGACCTTGGATTGGGA+TGG + chr4_4:64219356-64219375 None:intergenic 55.0%
AGGGTCAATCCGAAGGACCT+TGG + chr4_4:64219366-64219385 None:intergenic 55.0%
ATGCAGAGAGCAAGGCTCGG+TGG - chr4_4:64213806-64213825 Msa0694840:three_prime_UTR 60.0%
TGAGGACTGTCGCAGGTGGA+TGG - chr4_4:64214714-64214733 Msa0694840:intron 60.0%
AAACGGGCAGCATGCCACTC+TGG + chr4_4:64214753-64214772 None:intergenic 60.0%
AGAGTGGCATGCTGCCCGTT+TGG - chr4_4:64214752-64214771 Msa0694840:intron 60.0%
GTCAAAGCGGAAATGCGGCG+CGG - chr4_4:64215913-64215932 Msa0694840:intron 60.0%
!! ACGCGTAGCGGGCGCTATTT+CGG - chr4_4:64215951-64215970 Msa0694840:intron 60.0%
GGCGCGATTGCAGGTCAAAG+CGG + chr4_4:64216517-64216536 None:intergenic 60.0%
TTGGAGAAGGCGGCTGAAGC+GGG + chr4_4:64216561-64216580 None:intergenic 60.0%
AAACGCGACGCAGCACTCCA+AGG + chr4_4:64216592-64216611 None:intergenic 60.0%
GGTGGGGTTGTGCATTCCCA+TGG + chr4_4:64217064-64217083 None:intergenic 60.0%
! GAGGGAGAATGACTGGCCCA+AGG + chr4_4:64218754-64218773 None:intergenic 60.0%
!! GCAAGGCTCGGTGGTGCTTC+CGG - chr4_4:64213815-64213834 Msa0694840:three_prime_UTR 65.0%
TGCTTCCGGTGGTCCCGATG+AGG - chr4_4:64213829-64213848 Msa0694840:three_prime_UTR 65.0%
!! CGTAGCGGGCGCTATTTCGG+TGG - chr4_4:64215954-64215973 Msa0694840:intron 65.0%
!! AGGCTCGGTGGTGCTTCCGG+TGG - chr4_4:64213818-64213837 Msa0694840:three_prime_UTR 70.0%
! CGGGCGCTATTTCGGTGGCG+CGG - chr4_4:64215959-64215978 Msa0694840:intron 70.0%
GCTGAAGCGGGCGCGATTGC+GGG + chr4_4:64216549-64216568 None:intergenic 70.0%
GGCTGAAGCGGGCGCGATTG+CGG + chr4_4:64216550-64216569 None:intergenic 70.0%
AGCCGCTACCGGCGCTATCG+CGG + chr4_4:64216632-64216651 None:intergenic 70.0%
CTACCGGCGCTATCGCGGCG+CGG + chr4_4:64216627-64216646 None:intergenic 75.0%
!! CGCCGCGATAGCGCCGGTAG+CGG - chr4_4:64216627-64216646 Msa0694840:CDS 75.0%
! TGGCCGCGCCGCGATAGCGC+CGG - chr4_4:64216621-64216640 Msa0694840:CDS 80.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 64213556 64220605 64213556 ID=Msa0694840;Name=Msa0694840
chr4_4 mRNA 64213556 64220605 64213556 ID=Msa0694840-mRNA-1;Parent=Msa0694840;Name=Msa0694840-mRNA-1;_AED=0.16;_eAED=0.16;_QI=223|1|1|1|1|1|5|388|201
chr4_4 exon 64213556 64214171 64213556 ID=Msa0694840-mRNA-1:exon:18376;Parent=Msa0694840-mRNA-1
chr4_4 exon 64216393 64216439 64216393 ID=Msa0694840-mRNA-1:exon:18375;Parent=Msa0694840-mRNA-1
chr4_4 exon 64216545 64216686 64216545 ID=Msa0694840-mRNA-1:exon:18374;Parent=Msa0694840-mRNA-1
chr4_4 exon 64219331 64219432 64219331 ID=Msa0694840-mRNA-1:exon:18373;Parent=Msa0694840-mRNA-1
chr4_4 exon 64220296 64220605 64220296 ID=Msa0694840-mRNA-1:exon:18372;Parent=Msa0694840-mRNA-1
chr4_4 five_prime_UTR 64220383 64220605 64220383 ID=Msa0694840-mRNA-1:five_prime_utr;Parent=Msa0694840-mRNA-1
chr4_4 CDS 64220296 64220382 64220296 ID=Msa0694840-mRNA-1:cds;Parent=Msa0694840-mRNA-1
chr4_4 CDS 64219331 64219432 64219331 ID=Msa0694840-mRNA-1:cds;Parent=Msa0694840-mRNA-1
chr4_4 CDS 64216545 64216686 64216545 ID=Msa0694840-mRNA-1:cds;Parent=Msa0694840-mRNA-1
chr4_4 CDS 64216393 64216439 64216393 ID=Msa0694840-mRNA-1:cds;Parent=Msa0694840-mRNA-1
chr4_4 CDS 64213944 64214171 64213944 ID=Msa0694840-mRNA-1:cds;Parent=Msa0694840-mRNA-1
chr4_4 three_prime_UTR 64213556 64213943 64213556 ID=Msa0694840-mRNA-1:three_prime_utr;Parent=Msa0694840-mRNA-1
Gene Sequence

>Msa0694840

ATGGGGAAAAATCAAGCATACAAAGCTATGCAGAGAGCAAGGCTCGGTGGTGCTTCCGGTGGTCCCGATGAGGTTGAAGATGGCATGGTGGATGGTTCATTTCATTCACCAGAGTGGCATGCTGCCCGTTTGGCTAGCCTTAAAACATCTCACACAATTACCTGGGAAGAGTACAAAAAGAAACAAAAGGAAGAAGAACTGAAAAAGGGGGAGCTGGAAGCAGATGCAGATAAGATGATGAGGGAGTACAGGGCTCAACTAGATGCTGAAAGGGCTCGCAAACTTTCCCAGGGTAGAAATCACTCTAGTAGTAAGTCTAAACATTCAAAAGACAAGAGGGACAAAATTTCAAAGAAGCATAGCAGCAGAAAAAGAAAGCATTCAAGAAGATCTTCTCCATCTAGCTCCTCTTCATCATCCTCATACTCTTCCAGTAGTGAAGACGAAGAGAGATCATCAAAAAGATCAAAGTCCAGGTCTAAGCGGTCAAAGAAGGAAAAGAAGCACAAGTCAAAAAGCAAGGATTCTGGAACCGATAGTGAAGATGGTGGCGGACCAGTTCGCCTATCGAAATTTTTTGGGACATCAAGAGTTGATAGTGGTTGA

Protein sequence

>Msa0694840

MGKNQAYKAMQRARLGGASGGPDEVEDGMVDGSFHSPEWHAARLASLKTSHTITWEEYKKKQKEEELKKGELEADADKMMREYRAQLDAERARKLSQGRNHSSSKSKHSKDKRDKISKKHSSRKRKHSRRSSPSSSSSSSSYSSSSEDEERSSKRSKSRSKRSKKEKKHKSKSKDSGTDSEDGGGPVRLSKFFGTSRVDSG*