Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898890 | XP_013453021.1 | 89.649 | 599 | 14 | 1 | 1 | 551 | 1 | 599 | 0.0 | 1092 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898890 | sp|Q9LS46|ALMT9_ARATH | 55.798 | 595 | 176 | 11 | 10 | 539 | 4 | 576 | 0.0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004060 | Msa0898890 | 0.802240 | 6.162126e-49 | -8.615850e-47 |
| Msa0006880 | Msa0898890 | 0.826967 | 2.028085e-54 | -8.615850e-47 |
| Msa0007850 | Msa0898890 | 0.808063 | 3.723673e-50 | -8.615850e-47 |
| Msa0015460 | Msa0898890 | 0.812779 | 3.570852e-51 | -8.615850e-47 |
| Msa0029260 | Msa0898890 | 0.809715 | 1.649950e-50 | -8.615850e-47 |
| Msa0032260 | Msa0898890 | 0.800771 | 1.232871e-48 | -8.615850e-47 |
| Msa0033880 | Msa0898890 | 0.803978 | 2.692874e-49 | -8.615850e-47 |
| Msa0047160 | Msa0898890 | 0.810798 | 9.633527e-51 | -8.615850e-47 |
| Msa0047280 | Msa0898890 | 0.818383 | 2.017270e-52 | -8.615850e-47 |
| Msa0048180 | Msa0898890 | 0.814466 | 1.519103e-51 | -8.615850e-47 |
| Msa0052350 | Msa0898890 | -0.828521 | 8.583903e-55 | -8.615850e-47 |
| Msa0055100 | Msa0898890 | 0.811974 | 5.351373e-51 | -8.615850e-47 |
| Msa0055150 | Msa0898890 | 0.804724 | 1.883137e-49 | -8.615850e-47 |
| Msa0061970 | Msa0898890 | 0.833036 | 6.714690e-56 | -8.615850e-47 |
| Msa0065010 | Msa0898890 | 0.821481 | 3.945426e-53 | -8.615850e-47 |
| Msa0097360 | Msa0898890 | -0.811869 | 5.642987e-51 | -8.615850e-47 |
| Msa0101180 | Msa0898890 | 0.827258 | 1.727912e-54 | -8.615850e-47 |
| Msa0108870 | Msa0898890 | 0.805989 | 1.022444e-49 | -8.615850e-47 |
| Msa0109590 | Msa0898890 | 0.818593 | 1.808100e-52 | -8.615850e-47 |
| Msa0112300 | Msa0898890 | -0.803984 | 2.684769e-49 | -8.615850e-47 |
| Msa0603670 | Msa0898890 | 0.801231 | 9.925759e-49 | -8.615850e-47 |
| Msa0609000 | Msa0898890 | 0.832606 | 8.590550e-56 | -8.615850e-47 |
| Msa0610390 | Msa0898890 | 0.822773 | 1.979725e-53 | -8.615850e-47 |
| Msa0618930 | Msa0898890 | 0.840826 | 6.880031e-58 | -8.615850e-47 |
| Msa0619920 | Msa0898890 | 0.823770 | 1.157894e-53 | -8.615850e-47 |
| Msa0626940 | Msa0898890 | 0.801249 | 9.843711e-49 | -8.615850e-47 |
| Msa0631350 | Msa0898890 | 0.850890 | 1.267025e-60 | -8.615850e-47 |
| Msa0644660 | Msa0898890 | 0.812920 | 3.325006e-51 | -8.615850e-47 |
| Msa0650920 | Msa0898890 | 0.809666 | 1.690527e-50 | -8.615850e-47 |
| Msa0654870 | Msa0898890 | 0.802372 | 5.787609e-49 | -8.615850e-47 |
| Msa0659140 | Msa0898890 | 0.810758 | 9.830305e-51 | -8.615850e-47 |
| Msa0659990 | Msa0898890 | 0.807833 | 4.166178e-50 | -8.615850e-47 |
| Msa0662630 | Msa0898890 | 0.802914 | 4.473788e-49 | -8.615850e-47 |
| Msa0666230 | Msa0898890 | 0.833884 | 4.126507e-56 | -8.615850e-47 |
| Msa0669720 | Msa0898890 | 0.813071 | 3.081339e-51 | -8.615850e-47 |
| Msa0677770 | Msa0898890 | 0.820718 | 5.914658e-53 | -8.615850e-47 |
| Msa0682140 | Msa0898890 | 0.802481 | 5.497757e-49 | -8.615850e-47 |
| Msa0691690 | Msa0898890 | 0.830987 | 2.155196e-55 | -8.615850e-47 |
| Msa0691900 | Msa0898890 | 0.816516 | 5.311987e-52 | -8.615850e-47 |
| Msa0703910 | Msa0898890 | 0.805179 | 1.512175e-49 | -8.615850e-47 |
| Msa0705600 | Msa0898890 | 0.824482 | 7.881998e-54 | -8.615850e-47 |
| Msa0706390 | Msa0898890 | 0.813948 | 1.976500e-51 | -8.615850e-47 |
| Msa0707390 | Msa0898890 | 0.809813 | 1.571614e-50 | -8.615850e-47 |
| Msa0719420 | Msa0898890 | 0.817738 | 2.822248e-52 | -8.615850e-47 |
| Msa0748920 | Msa0898890 | 0.815982 | 6.993637e-52 | -8.615850e-47 |
| Msa0751010 | Msa0898890 | 0.809505 | 1.830874e-50 | -8.615850e-47 |
| Msa0758230 | Msa0898890 | 0.821147 | 4.711612e-53 | -8.615850e-47 |
| Msa0789680 | Msa0898890 | 0.815766 | 7.815167e-52 | -8.615850e-47 |
| Msa0794050 | Msa0898890 | 0.823359 | 1.445532e-53 | -8.615850e-47 |
| Msa0802410 | Msa0898890 | 0.811978 | 5.341873e-51 | -8.615850e-47 |
| Msa0805500 | Msa0898890 | 0.801930 | 7.137063e-49 | -8.615850e-47 |
| Msa0806920 | Msa0898890 | 0.802617 | 5.153951e-49 | -8.615850e-47 |
| Msa0818770 | Msa0898890 | 0.845601 | 3.669194e-59 | -8.615850e-47 |
| Msa0819060 | Msa0898890 | 0.804114 | 2.523007e-49 | -8.615850e-47 |
| Msa0839200 | Msa0898890 | 0.800600 | 1.335529e-48 | -8.615850e-47 |
| Msa0126770 | Msa0898890 | 0.819162 | 1.342230e-52 | -8.615850e-47 |
| Msa0127040 | Msa0898890 | 0.802277 | 6.056371e-49 | -8.615850e-47 |
| Msa0127310 | Msa0898890 | 0.819208 | 1.310560e-52 | -8.615850e-47 |
| Msa0128860 | Msa0898890 | 0.802642 | 5.092044e-49 | -8.615850e-47 |
| Msa0131450 | Msa0898890 | 0.807170 | 5.762042e-50 | -8.615850e-47 |
| Msa0139990 | Msa0898890 | 0.815534 | 8.801112e-52 | -8.615850e-47 |
| Msa0140520 | Msa0898890 | -0.802610 | 5.169388e-49 | -8.615850e-47 |
| Msa0145150 | Msa0898890 | 0.802583 | 5.237857e-49 | -8.615850e-47 |
| Msa0155880 | Msa0898890 | 0.822001 | 2.992370e-53 | -8.615850e-47 |
| Msa0165950 | Msa0898890 | 0.822341 | 2.495409e-53 | -8.615850e-47 |
| Msa0166750 | Msa0898890 | 0.839839 | 1.246528e-57 | -8.615850e-47 |
| Msa0167480 | Msa0898890 | 0.813445 | 2.549927e-51 | -8.615850e-47 |
| Msa0169300 | Msa0898890 | 0.807399 | 5.152282e-50 | -8.615850e-47 |
| Msa0174730 | Msa0898890 | 0.801401 | 9.161298e-49 | -8.615850e-47 |
| Msa0175290 | Msa0898890 | -0.809416 | 1.912418e-50 | -8.615850e-47 |
| Msa0177270 | Msa0898890 | 0.818912 | 1.530494e-52 | -8.615850e-47 |
| Msa0183460 | Msa0898890 | 0.863072 | 3.231593e-64 | -8.615850e-47 |
| Msa0191080 | Msa0898890 | 0.820752 | 5.808585e-53 | -8.615850e-47 |
| Msa0193600 | Msa0898890 | 0.800170 | 1.634468e-48 | -8.615850e-47 |
| Msa0211650 | Msa0898890 | 0.804497 | 2.099769e-49 | -8.615850e-47 |
| Msa0219250 | Msa0898890 | -0.820886 | 5.410769e-53 | -8.615850e-47 |
| Msa0226330 | Msa0898890 | 0.806186 | 9.294595e-50 | -8.615850e-47 |
| Msa0226460 | Msa0898890 | 0.822842 | 1.907847e-53 | -8.615850e-47 |
| Msa0226470 | Msa0898890 | 0.808304 | 3.307070e-50 | -8.615850e-47 |
| Msa0231100 | Msa0898890 | 0.815724 | 7.984378e-52 | -8.615850e-47 |
| Msa0231660 | Msa0898890 | 0.809020 | 2.325252e-50 | -8.615850e-47 |
| Msa0236270 | Msa0898890 | 0.818234 | 2.180241e-52 | -8.615850e-47 |
| Msa0365860 | Msa0898890 | 0.809963 | 1.458969e-50 | -8.615850e-47 |
| Msa0370160 | Msa0898890 | -0.806452 | 8.171314e-50 | -8.615850e-47 |
| Msa0376690 | Msa0898890 | 0.801197 | 1.008615e-48 | -8.615850e-47 |
| Msa0384880 | Msa0898890 | 0.822019 | 2.963724e-53 | -8.615850e-47 |
| Msa0385490 | Msa0898890 | 0.813934 | 1.990450e-51 | -8.615850e-47 |
| Msa0419520 | Msa0898890 | 0.820391 | 7.030089e-53 | -8.615850e-47 |
| Msa0419720 | Msa0898890 | 0.804435 | 2.162909e-49 | -8.615850e-47 |
| Msa0436200 | Msa0898890 | 0.804217 | 2.401238e-49 | -8.615850e-47 |
| Msa0437690 | Msa0898890 | -0.803027 | 4.239866e-49 | -8.615850e-47 |
| Msa0439890 | Msa0898890 | 0.806474 | 8.081846e-50 | -8.615850e-47 |
| Msa0443390 | Msa0898890 | 0.805831 | 1.104081e-49 | -8.615850e-47 |
| Msa0458060 | Msa0898890 | 0.827051 | 1.936275e-54 | -8.615850e-47 |
| Msa0458780 | Msa0898890 | 0.821343 | 4.245675e-53 | -8.615850e-47 |
| Msa0465550 | Msa0898890 | 0.828914 | 6.897061e-55 | -8.615850e-47 |
| Msa0258880 | Msa0898890 | -0.819012 | 1.451864e-52 | -8.615850e-47 |
| Msa0262480 | Msa0898890 | 0.826267 | 2.979904e-54 | -8.615850e-47 |
| Msa0280430 | Msa0898890 | 0.820264 | 7.518399e-53 | -8.615850e-47 |
| Msa0291520 | Msa0898890 | 0.823636 | 1.245165e-53 | -8.615850e-47 |
| Msa0300350 | Msa0898890 | 0.804319 | 2.286609e-49 | -8.615850e-47 |
| Msa0304590 | Msa0898890 | 0.818633 | 1.770253e-52 | -8.615850e-47 |
| Msa0304660 | Msa0898890 | 0.832938 | 7.103219e-56 | -8.615850e-47 |
| Msa0331700 | Msa0898890 | 0.832648 | 8.382966e-56 | -8.615850e-47 |
| Msa0335320 | Msa0898890 | -0.808006 | 3.828558e-50 | -8.615850e-47 |
| Msa0337650 | Msa0898890 | 0.802997 | 4.300884e-49 | -8.615850e-47 |
| Msa0527910 | Msa0898890 | 0.812885 | 3.384691e-51 | -8.615850e-47 |
| Msa0534900 | Msa0898890 | 0.822776 | 1.976864e-53 | -8.615850e-47 |
| Msa0546570 | Msa0898890 | 0.804823 | 1.795157e-49 | -8.615850e-47 |
| Msa0550540 | Msa0898890 | 0.822139 | 2.778512e-53 | -8.615850e-47 |
| Msa0550570 | Msa0898890 | 0.834404 | 3.057219e-56 | -8.615850e-47 |
| Msa0586850 | Msa0898890 | 0.801481 | 8.822204e-49 | -8.615850e-47 |
| Msa0888990 | Msa0898890 | 0.803869 | 2.837213e-49 | -8.615850e-47 |
| Msa0898890 | Msa0901110 | 0.811927 | 5.481154e-51 | -8.615850e-47 |
| Msa0898890 | Msa0901450 | 0.820000 | 8.639919e-53 | -8.615850e-47 |
| Msa0898890 | Msa0921870 | 0.811923 | 5.490500e-51 | -8.615850e-47 |
| Msa0898890 | Msa0928120 | 0.819670 | 1.028286e-52 | -8.615850e-47 |
| Msa0898890 | Msa0937330 | 0.810674 | 1.025147e-50 | -8.615850e-47 |
| Msa0898890 | Msa0944610 | 0.812314 | 4.511935e-51 | -8.615850e-47 |
| Msa0898890 | Msa0960830 | 0.838208 | 3.297000e-57 | -8.615850e-47 |
| Msa0898890 | Msa0963020 | 0.823782 | 1.150674e-53 | -8.615850e-47 |
| Msa0898890 | Msa0997430 | 0.806489 | 8.022740e-50 | -8.615850e-47 |
| Msa0898890 | Msa1000930 | 0.818840 | 1.589156e-52 | -8.615850e-47 |
| Msa0898890 | Msa1001350 | 0.821351 | 4.229447e-53 | -8.615850e-47 |
| Msa0898890 | Msa1002600 | -0.806258 | 8.977856e-50 | -8.615850e-47 |
| Msa0898890 | Msa1019240 | 0.819079 | 1.401983e-52 | -8.615850e-47 |
| Msa0898890 | Msa1019260 | 0.811128 | 8.173513e-51 | -8.615850e-47 |
| Msa0898890 | Msa1025940 | 0.814208 | 1.731792e-51 | -8.615850e-47 |
| Msa0898890 | Msa1029970 | 0.814061 | 1.865933e-51 | -8.615850e-47 |
| Msa0898890 | Msa1048760 | -0.814833 | 1.259380e-51 | -8.615850e-47 |
| Msa0898890 | Msa1071530 | 0.807621 | 4.621133e-50 | -8.615850e-47 |
| Msa0898890 | Msa1072710 | 0.805132 | 1.547333e-49 | -8.615850e-47 |
| Msa0898890 | Msa1073400 | 0.818772 | 1.646607e-52 | -8.615850e-47 |
| Msa0898890 | Msa1089840 | 0.800662 | 1.297393e-48 | -8.615850e-47 |
| Msa0898890 | Msa1093330 | 0.834701 | 2.574688e-56 | -8.615850e-47 |
| Msa0898890 | Msa1100530 | -0.826976 | 2.018554e-54 | -8.615850e-47 |
| Msa0898890 | Msa1104210 | 0.816755 | 4.694913e-52 | -8.615850e-47 |
| Msa0898890 | Msa1120810 | 0.825884 | 3.674724e-54 | -8.615850e-47 |
| Msa0898890 | Msa1122820 | 0.814042 | 1.883927e-51 | -8.615850e-47 |
| Msa0898890 | Msa1126850 | 0.805778 | 1.132430e-49 | -8.615850e-47 |
| Msa0898890 | Msa1131170 | 0.808699 | 2.724669e-50 | -8.615850e-47 |
| Msa0898890 | Msa1131560 | 0.813573 | 2.390865e-51 | -8.615850e-47 |
| Msa0898890 | Msa1133250 | 0.813284 | 2.766607e-51 | -8.615850e-47 |
| Msa0898890 | Msa1135800 | -0.814952 | 1.185508e-51 | -8.615850e-47 |
| Msa0898890 | Msa1138870 | 0.800270 | 1.559564e-48 | -8.615850e-47 |
| Msa0898890 | Msa1160360 | 0.804185 | 2.439222e-49 | -8.615850e-47 |
| Msa0898890 | Msa1165780 | 0.809930 | 1.483005e-50 | -8.615850e-47 |
| Msa0898890 | Msa1166870 | 0.838995 | 2.064862e-57 | -8.615850e-47 |
| Msa0898890 | Msa1179950 | 0.807155 | 5.802162e-50 | -8.615850e-47 |
| Msa0898890 | Msa1179980 | 0.822361 | 2.468669e-53 | -8.615850e-47 |
| Msa0898890 | Msa1201830 | 0.802405 | 5.698276e-49 | -8.615850e-47 |
| Msa0898890 | Msa1202580 | 0.820069 | 8.334651e-53 | -8.615850e-47 |
| Msa0898890 | Msa1205850 | 0.809299 | 2.026328e-50 | -8.615850e-47 |
| Msa0898890 | Msa1206360 | 0.802819 | 4.681872e-49 | -8.615850e-47 |
| Msa0898890 | Msa1207730 | 0.802822 | 4.675726e-49 | -8.615850e-47 |
| Msa0898890 | Msa1211830 | 0.808327 | 3.270552e-50 | -8.615850e-47 |
| Msa0898890 | Msa1216260 | 0.802897 | 4.511582e-49 | -8.615850e-47 |
| Msa0898890 | Msa1226610 | 0.805320 | 1.412831e-49 | -8.615850e-47 |
| Msa0898890 | Msa1227690 | 0.806824 | 6.816882e-50 | -8.615850e-47 |
| Msa0898890 | Msa1253810 | 0.815473 | 9.080533e-52 | -8.615850e-47 |
| Msa0898890 | Msa1265590 | 0.803682 | 3.102359e-49 | -8.615850e-47 |
| Msa0898890 | Msa1265630 | 0.808290 | 3.330804e-50 | -8.615850e-47 |
| Msa0898890 | Msa1269300 | 0.802062 | 6.702888e-49 | -8.615850e-47 |
| Msa0898890 | Msa1270620 | 0.831031 | 2.101392e-55 | -8.615850e-47 |
| Msa0898890 | Msa1270690 | 0.822734 | 2.021668e-53 | -8.615850e-47 |
| Msa0898890 | Msa1294960 | 0.828026 | 1.129713e-54 | -8.615850e-47 |
| Msa0898890 | Msa1299700 | 0.835310 | 1.808112e-56 | -8.615850e-47 |
| Msa0898890 | Msa1306990 | 0.806392 | 8.409562e-50 | -8.615850e-47 |
| Msa0898890 | Msa1323990 | 0.830120 | 3.511989e-55 | -8.615850e-47 |
| Msa0898890 | Msa1327490 | 0.801846 | 7.426715e-49 | -8.615850e-47 |
| Msa0898890 | Msa1331250 | 0.804235 | 2.380690e-49 | -8.615850e-47 |
| Msa0898890 | Msa1331710 | 0.827628 | 1.408348e-54 | -8.615850e-47 |
| Msa0898890 | Msa1332220 | 0.805811 | 1.114761e-49 | -8.615850e-47 |
| Msa0898890 | Msa1349570 | 0.807186 | 5.716218e-50 | -8.615850e-47 |
| Msa0898890 | Msa1351540 | 0.800938 | 1.139505e-48 | -8.615850e-47 |
| Msa0898890 | Msa1355700 | 0.819919 | 9.017795e-53 | -8.615850e-47 |
| Msa0898890 | Msa1365860 | 0.810678 | 1.022709e-50 | -8.615850e-47 |
| Msa0898890 | Msa1379760 | 0.807908 | 4.017318e-50 | -8.615850e-47 |
| Msa0898890 | Msa1418960 | -0.827366 | 1.627672e-54 | -8.615850e-47 |
| Msa0898890 | Msa1431040 | 0.800017 | 1.755336e-48 | -8.615850e-47 |
| Msa0898890 | Msa1433600 | 0.824035 | 1.003817e-53 | -8.615850e-47 |
| Msa0898890 | Msa1444310 | 0.812083 | 5.066599e-51 | -8.615850e-47 |
| Msa0898890 | Msa1454450 | 0.807261 | 5.510054e-50 | -8.615850e-47 |
| Msa0898890 | Msa1454680 | 0.800245 | 1.577621e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898890 | MtrunA17_Chr6g0484691 | 89.649 | 599 | 14 | 1 | 1 | 551 | 1 | 599 | 0.0 | 1092 |
| Msa0898890 | MtrunA17_Chr8g0390921 | 63.193 | 595 | 145 | 7 | 7 | 549 | 4 | 576 | 0.0 | 709 |
| Msa0898890 | MtrunA17_Chr8g0390931 | 59.184 | 588 | 153 | 10 | 20 | 551 | 12 | 568 | 0.0 | 653 |
| Msa0898890 | MtrunA17_Chr8g0390901 | 73.364 | 428 | 100 | 6 | 130 | 549 | 47 | 468 | 0.0 | 637 |
| Msa0898890 | MtrunA17_Chr1g0210101 | 49.570 | 581 | 210 | 10 | 1 | 532 | 40 | 586 | 0.0 | 524 |
| Msa0898890 | MtrunA17_Chr4g0054741 | 30.000 | 510 | 269 | 11 | 71 | 528 | 32 | 505 | 1.43e-65 | 222 |
| Msa0898890 | MtrunA17_Chr1g0188871 | 31.944 | 360 | 184 | 5 | 68 | 378 | 30 | 377 | 6.29e-60 | 206 |
| Msa0898890 | MtrunA17_Chr1g0212251 | 27.168 | 519 | 296 | 10 | 58 | 528 | 14 | 498 | 1.98e-59 | 206 |
| Msa0898890 | MtrunA17_Chr1g0212201 | 26.923 | 520 | 298 | 11 | 58 | 528 | 18 | 504 | 2.57e-57 | 200 |
| Msa0898890 | MtrunA17_Chr1g0212291 | 29.198 | 524 | 285 | 12 | 58 | 528 | 15 | 505 | 1.10e-56 | 198 |
| Msa0898890 | MtrunA17_Chr1g0188881 | 31.053 | 380 | 199 | 6 | 48 | 378 | 19 | 384 | 2.16e-55 | 194 |
| Msa0898890 | MtrunA17_Chr2g0321971 | 31.268 | 339 | 171 | 4 | 70 | 357 | 23 | 350 | 4.52e-51 | 181 |
| Msa0898890 | MtrunA17_Chr4g0054771 | 29.771 | 393 | 235 | 9 | 139 | 528 | 3 | 357 | 4.65e-50 | 177 |
| Msa0898890 | MtrunA17_Chr5g0400471 | 29.748 | 437 | 236 | 13 | 136 | 538 | 47 | 446 | 1.23e-49 | 177 |
| Msa0898890 | MtrunA17_Chr2g0321961 | 29.942 | 344 | 184 | 6 | 64 | 359 | 17 | 351 | 1.13e-45 | 166 |
| Msa0898890 | MtrunA17_Chr7g0267471 | 28.706 | 425 | 225 | 10 | 84 | 452 | 42 | 444 | 5.17e-43 | 160 |
| Msa0898890 | MtrunA17_Chr4g0025591 | 25.824 | 364 | 210 | 5 | 44 | 359 | 4 | 355 | 5.81e-42 | 157 |
| Msa0898890 | MtrunA17_Chr7g0259731 | 28.446 | 341 | 179 | 8 | 89 | 376 | 61 | 389 | 7.25e-40 | 150 |
| Msa0898890 | MtrunA17_Chr8g0390911 | 55.970 | 134 | 41 | 3 | 7 | 139 | 4 | 120 | 1.96e-37 | 134 |
| Msa0898890 | MtrunA17_Chr1g0189041 | 69.048 | 42 | 13 | 0 | 130 | 171 | 15 | 56 | 3.55e-15 | 70.5 |
| Msa0898890 | MtrunA17_Chr6g0454771 | 66.667 | 45 | 15 | 0 | 130 | 174 | 76 | 120 | 2.10e-14 | 70.1 |
| Msa0898890 | MtrunA17_Chr5g0400481 | 39.726 | 73 | 40 | 1 | 71 | 139 | 40 | 112 | 4.07e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898890 | AT3G18440.1 | 55.798 | 595 | 176 | 11 | 10 | 539 | 4 | 576 | 0.0 | 613 |
| Msa0898890 | AT1G18420.1 | 52.487 | 583 | 187 | 13 | 12 | 532 | 27 | 581 | 0.0 | 550 |
| Msa0898890 | AT1G18420.2 | 55.098 | 510 | 155 | 9 | 85 | 532 | 1 | 498 | 0.0 | 526 |
| Msa0898890 | AT1G25480.1 | 48.682 | 569 | 215 | 9 | 20 | 535 | 4 | 548 | 1.97e-172 | 499 |
| Msa0898890 | AT1G68600.1 | 50.294 | 511 | 191 | 6 | 72 | 532 | 36 | 533 | 3.20e-159 | 465 |
| Msa0898890 | AT2G17470.1 | 49.709 | 515 | 184 | 7 | 84 | 543 | 31 | 525 | 8.51e-159 | 464 |
| Msa0898890 | AT2G17470.2 | 49.709 | 515 | 184 | 7 | 84 | 543 | 53 | 547 | 1.12e-158 | 464 |
| Msa0898890 | AT5G46610.3 | 30.818 | 477 | 300 | 8 | 60 | 528 | 17 | 471 | 2.54e-74 | 244 |
| Msa0898890 | AT5G46610.2 | 29.600 | 500 | 299 | 9 | 60 | 528 | 17 | 494 | 8.24e-70 | 233 |
| Msa0898890 | AT5G46610.1 | 28.244 | 524 | 299 | 9 | 60 | 528 | 17 | 518 | 4.02e-66 | 224 |
| Msa0898890 | AT4G17970.1 | 26.766 | 538 | 289 | 7 | 68 | 528 | 23 | 532 | 2.76e-65 | 223 |
| Msa0898890 | AT5G46600.1 | 27.239 | 547 | 322 | 13 | 35 | 528 | 2 | 525 | 2.81e-59 | 206 |
| Msa0898890 | AT4G00910.1 | 32.869 | 359 | 181 | 7 | 75 | 380 | 46 | 397 | 1.99e-58 | 202 |
| Msa0898890 | AT3G11680.2 | 30.117 | 342 | 173 | 6 | 64 | 357 | 25 | 348 | 1.62e-47 | 173 |
| Msa0898890 | AT3G11680.1 | 30.117 | 342 | 173 | 6 | 64 | 357 | 23 | 346 | 2.03e-47 | 172 |
| Msa0898890 | AT1G08430.1 | 27.907 | 344 | 191 | 7 | 73 | 365 | 2 | 339 | 5.92e-47 | 171 |
| Msa0898890 | AT1G08440.1 | 28.399 | 331 | 183 | 5 | 75 | 357 | 4 | 328 | 8.10e-45 | 166 |
| Msa0898890 | AT2G27240.2 | 28.308 | 325 | 179 | 5 | 89 | 365 | 18 | 336 | 8.69e-43 | 159 |
| Msa0898890 | AT2G27240.1 | 27.507 | 349 | 177 | 7 | 89 | 365 | 18 | 362 | 2.54e-40 | 153 |
Find 120 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGCTCACCATTATATTAT+TGG | 0.169950 | 6_1:-93567417 | None:intergenic |
| GTTTAATTGTTTCAAATCTA+AGG | 0.221413 | 6_1:+93573196 | Msa0898890:CDS |
| ACTCAGGCATTGTGCATTTA+TGG | 0.225741 | 6_1:+93571468 | Msa0898890:CDS |
| ACAATGAAGGCTTATGAATA+TGG | 0.228453 | 6_1:+93570531 | Msa0898890:CDS |
| TATTGTTACGTTATTGTATC+TGG | 0.230169 | 6_1:+93570576 | Msa0898890:CDS |
| TGAGAAACATTCTCGTTTCT+TGG | 0.242314 | 6_1:-93572762 | None:intergenic |
| TTCTCACAGGGTACCCAAAC+TGG | 0.269181 | 6_1:+93567641 | Msa0898890:CDS |
| AGGTGAGAAAGCAAAGTTTA+AGG | 0.271199 | 6_1:+93573127 | Msa0898890:CDS |
| ATGTGTGCATATATCCAATA+TGG | 0.288826 | 6_1:+93570682 | Msa0898890:CDS |
| GGATGAAGAAAGACATTTCT+TGG | 0.297160 | 6_1:+93572800 | Msa0898890:CDS |
| CAGATGGGATCGTGGAGTTC+TGG | 0.299939 | 6_1:+93567823 | Msa0898890:CDS |
| AATGCAGAGCTGTGGGAAAT+AGG | 0.303810 | 6_1:+93572732 | Msa0898890:CDS |
| TCATCATCGTCGTCGGATTC+CGG | 0.332728 | 6_1:-93567759 | None:intergenic |
| ATGAAAGGTGGCGGTGGCGG+TGG | 0.333630 | 6_1:+93567711 | Msa0898890:CDS |
| TTACCGACGAAAACATGTTT+AGG | 0.343971 | 6_1:+93572934 | Msa0898890:CDS |
| ACAAATCGGCATCCCTTTAC+CGG | 0.358676 | 6_1:+93567740 | Msa0898890:CDS |
| AGATCTTCACCGGCCCATAT+TGG | 0.373138 | 6_1:-93570696 | None:intergenic |
| TAATGAACTAGCACTTTCAT+AGG | 0.375230 | 6_1:-93573027 | None:intergenic |
| AGCAGGTTTAATGATGTTAT+CGG | 0.382986 | 6_1:-93572904 | None:intergenic |
| TATTCATAAGCCTTCATTGT+TGG | 0.386844 | 6_1:-93570528 | None:intergenic |
| GTGACGGAAGGAACCCAGTT+TGG | 0.388277 | 6_1:-93567655 | None:intergenic |
| TTTCTTCATCCATTTGTAAG+AGG | 0.389222 | 6_1:-93572788 | None:intergenic |
| TGTTGGGAAGTACTCTGTTT+GGG | 0.395794 | 6_1:+93567983 | Msa0898890:CDS |
| ATGTTGGGAAGTACTCTGTT+TGG | 0.397740 | 6_1:+93567982 | Msa0898890:CDS |
| ATTACTCACCAATAATATAA+TGG | 0.404454 | 6_1:+93567409 | Msa0898890:five_prime_UTR |
| TTCCTGTGATGTTATTAGTT+CGG | 0.413745 | 6_1:-93567346 | None:intergenic |
| TTACCTTCTTAAGCTCTTTG+CGG | 0.417975 | 6_1:-93572563 | None:intergenic |
| TCGTCGTCGGATTCCGGTAA+AGG | 0.418624 | 6_1:-93567753 | None:intergenic |
| GCTGAAAACACAAACTTCCT+TGG | 0.420798 | 6_1:-93567897 | None:intergenic |
| ACAGAGTACTTCCCAACATC+TGG | 0.433300 | 6_1:-93567978 | None:intergenic |
| AAACAGCCGTTTCCAGATGT+TGG | 0.433911 | 6_1:+93567966 | Msa0898890:CDS |
| AACAGCCGTTTCCAGATGTT+GGG | 0.437838 | 6_1:+93567967 | Msa0898890:CDS |
| TTCTCAAGACCTCTTACAAA+TGG | 0.444082 | 6_1:+93572779 | Msa0898890:CDS |
| AGATACAATAACGTAACAAT+AGG | 0.444661 | 6_1:-93570574 | None:intergenic |
| AGCTGTGGGAAATAGGTAAC+AGG | 0.447700 | 6_1:+93572739 | Msa0898890:CDS |
| CAACAAGAACTTGTAACATC+TGG | 0.450503 | 6_1:+93573161 | Msa0898890:CDS |
| GGGGTTTGTTTGAAGATTGT+GGG | 0.451809 | 6_1:-93567545 | None:intergenic |
| AGGGGTTTGTTTGAAGATTG+TGG | 0.454993 | 6_1:-93567546 | None:intergenic |
| TGACGGAAGGAACCCAGTTT+GGG | 0.457037 | 6_1:-93567654 | None:intergenic |
| TAGAAAGAAAGTTGATCTAC+TGG | 0.457831 | 6_1:-93567469 | None:intergenic |
| AAGAATTTGAAACGTGTGGC+GGG | 0.462155 | 6_1:+93567846 | Msa0898890:CDS |
| GCAGGTTTAATGATGTTATC+GGG | 0.463058 | 6_1:-93572903 | None:intergenic |
| ATGTATACTTTCTGAAATAC+AGG | 0.465569 | 6_1:+93571507 | Msa0898890:CDS |
| GGCGGGGAAAGCATGGGAGA+TGG | 0.469847 | 6_1:+93567863 | Msa0898890:CDS |
| TGGATATAGCTTTGCATATG+TGG | 0.471115 | 6_1:-93570508 | None:intergenic |
| TATCGTATTCAACACAGTTA+AGG | 0.478209 | 6_1:-93571161 | None:intergenic |
| GCGTAGAACTTTAGTCGCTT+CGG | 0.478291 | 6_1:-93572589 | None:intergenic |
| TGTGATGTTATTAGTTCGGC+TGG | 0.478782 | 6_1:-93567342 | None:intergenic |
| TCGTCGGTAACAACATTAGC+AGG | 0.490901 | 6_1:-93572921 | None:intergenic |
| GCGGGGAAAGCATGGGAGAT+GGG | 0.493929 | 6_1:+93567864 | Msa0898890:CDS |
| GGCGGTGGGTATTCACAAAT+CGG | 0.497636 | 6_1:+93567726 | Msa0898890:CDS |
| AAAACTTGTCTCTTCTCCGC+TGG | 0.500088 | 6_1:-93572540 | None:intergenic |
| AGAAGATGCACCAACAAAAG+TGG | 0.500956 | 6_1:+93572992 | Msa0898890:CDS |
| AACGTGTGGCGGGGAAAGCA+TGG | 0.504246 | 6_1:+93567856 | Msa0898890:CDS |
| TCAATGAAAGGTGGCGGTGG+CGG | 0.508318 | 6_1:+93567708 | Msa0898890:CDS |
| TTTCCGCAAAGAGCTTAAGA+AGG | 0.514375 | 6_1:+93572560 | Msa0898890:CDS |
| ATTGTATCTGGATATCGAAC+CGG | 0.516050 | 6_1:+93570588 | Msa0898890:CDS |
| TACTTCCCAACATCTGGAAA+CGG | 0.517731 | 6_1:-93567972 | None:intergenic |
| TGAAAGGTGGCGGTGGCGGT+GGG | 0.518253 | 6_1:+93567712 | Msa0898890:CDS |
| CTAATAACATCACAGGAAAA+CGG | 0.518493 | 6_1:+93567351 | Msa0898890:five_prime_UTR |
| CTTGGTGCTGCTGTATCTGT+TGG | 0.524842 | 6_1:+93570654 | Msa0898890:CDS |
| CCATGATGCAATCTTCTCAC+AGG | 0.526047 | 6_1:+93567628 | Msa0898890:exon |
| TTTGTGTTGTAACTTGAAAG+TGG | 0.527242 | 6_1:-93567499 | None:intergenic |
| TTGTAACATCTGGTTGGACT+AGG | 0.528986 | 6_1:+93573171 | Msa0898890:CDS |
| TGCTGTATGAAGAAAGTCTC+CGG | 0.530779 | 6_1:-93570607 | None:intergenic |
| GCATTGTGCATTTATGGTCA+TGG | 0.531427 | 6_1:+93571474 | Msa0898890:CDS |
| AAGGATTGACATATACACTT+AGG | 0.534163 | 6_1:+93573215 | Msa0898890:exon |
| ACAAAATGTTTAGATATCCA+TGG | 0.538110 | 6_1:+93571419 | Msa0898890:CDS |
| TTCAAGGAAACTGTGACGGA+AGG | 0.540338 | 6_1:-93567667 | None:intergenic |
| TGGTGAGTAATAGAAGACTT+TGG | 0.541942 | 6_1:-93567397 | None:intergenic |
| TTCTTGTAAATGCAGAGCTG+TGG | 0.543062 | 6_1:+93572724 | Msa0898890:CDS |
| CAAGTTCTTGTTGTTCAAGA+GGG | 0.543303 | 6_1:-93573151 | None:intergenic |
| GCTATCTGGGAGCCACCTCA+TGG | 0.545299 | 6_1:+93571391 | Msa0898890:CDS |
| GTCGTCTTTGAGTTCAGTAT+AGG | 0.545881 | 6_1:+93568023 | Msa0898890:CDS |
| GTATCAAGCTTCTGATGATG+TGG | 0.550964 | 6_1:+93571206 | Msa0898890:CDS |
| TACAAGCACAGAGGATGCAT+TGG | 0.551459 | 6_1:+93571260 | Msa0898890:CDS |
| TTGTGTTGTAACTTGAAAGT+GGG | 0.551479 | 6_1:-93567498 | None:intergenic |
| GGCGTAGCAACATCATTAGA+AGG | 0.551490 | 6_1:+93570747 | Msa0898890:CDS |
| TGTGTGCATATATCCAATAT+GGG | 0.552034 | 6_1:+93570683 | Msa0898890:CDS |
| AAAGCTATATCCAACAATGA+AGG | 0.559221 | 6_1:+93570518 | Msa0898890:CDS |
| AAGAACTTGTAACATCTGGT+TGG | 0.564340 | 6_1:+93573165 | Msa0898890:CDS |
| GGGTTTGTTTGAAGATTGTG+GGG | 0.566930 | 6_1:-93567544 | None:intergenic |
| TTAACTGTGTTGAATACGAT+AGG | 0.567618 | 6_1:+93571163 | Msa0898890:CDS |
| ACAAGTTCTTGTTGTTCAAG+AGG | 0.570038 | 6_1:-93573152 | None:intergenic |
| TCTTGTAAATGCAGAGCTGT+GGG | 0.571185 | 6_1:+93572725 | Msa0898890:CDS |
| ACTAAAGTTCTACGCGAACT+CGG | 0.571792 | 6_1:+93572597 | Msa0898890:CDS |
| AAGATTATGTAGATCTTCAC+CGG | 0.577973 | 6_1:-93570706 | None:intergenic |
| TCTCACAGGGTACCCAAACT+GGG | 0.578661 | 6_1:+93567642 | Msa0898890:CDS |
| ACTACATTCGCCAACGACGG+TGG | 0.579632 | 6_1:+93567781 | Msa0898890:CDS |
| CTGGAAGAATTTGAAACGTG+TGG | 0.581704 | 6_1:+93567842 | Msa0898890:CDS |
| GAAACGAAAACCACCGTCGT+TGG | 0.585444 | 6_1:-93567791 | None:intergenic |
| CTCATGTCAATGAAAGGTGG+CGG | 0.587784 | 6_1:+93567702 | Msa0898890:CDS |
| ATGTCAATGAAAGGTGGCGG+TGG | 0.588834 | 6_1:+93567705 | Msa0898890:CDS |
| AGCCGAACTAATAACATCAC+AGG | 0.589755 | 6_1:+93567344 | Msa0898890:five_prime_UTR |
| ACGTGTGGCGGGGAAAGCAT+GGG | 0.593925 | 6_1:+93567857 | Msa0898890:CDS |
| AAGTTGATCTACTGGTCTGT+TGG | 0.594805 | 6_1:-93567461 | None:intergenic |
| AATGTAGTCATCATCGTCGT+CGG | 0.597630 | 6_1:-93567766 | None:intergenic |
| AGATGTGAAGACAAAGATGC+TGG | 0.600579 | 6_1:-93572960 | None:intergenic |
| GGTTTGTTTGAAGATTGTGG+GGG | 0.602599 | 6_1:-93567543 | None:intergenic |
| CTACTGGTCTGTTGGTAATG+CGG | 0.607189 | 6_1:-93567453 | None:intergenic |
| GTTTGTTTGAAGATTGTGGG+GGG | 0.607951 | 6_1:-93567542 | None:intergenic |
| ATGACTACATTCGCCAACGA+CGG | 0.612796 | 6_1:+93567778 | Msa0898890:CDS |
| AGAATTTGAAACGTGTGGCG+GGG | 0.614282 | 6_1:+93567847 | Msa0898890:CDS |
| GAAGAATTTGAAACGTGTGG+CGG | 0.621262 | 6_1:+93567845 | Msa0898890:CDS |
| TTTATGGTCATGGCTATGCA+TGG | 0.621553 | 6_1:+93571484 | Msa0898890:CDS |
| GGCTAGGCTACAAAACCTTG+TGG | 0.623864 | 6_1:+93573088 | Msa0898890:CDS |
| CATGATGCAATCTTCTCACA+GGG | 0.626037 | 6_1:+93567629 | Msa0898890:exon |
| TAACTGTGTTGAATACGATA+GGG | 0.627098 | 6_1:+93571164 | Msa0898890:CDS |
| TGCATATATCCAATATGGGC+CGG | 0.627717 | 6_1:+93570687 | Msa0898890:CDS |
| TTAAAGTAAGTGGAGCACTC+AGG | 0.643732 | 6_1:+93571452 | Msa0898890:CDS |
| TCTGATGATGTGGTTTACAG+CGG | 0.646018 | 6_1:+93571216 | Msa0898890:CDS |
| AGATGGGTGTGTCTGATCCA+AGG | 0.649272 | 6_1:+93567880 | Msa0898890:CDS |
| TGTGTTGTAACTTGAAAGTG+GGG | 0.649348 | 6_1:-93567497 | None:intergenic |
| AAACTCATGTCAATGAAAGG+TGG | 0.655476 | 6_1:+93567699 | Msa0898890:CDS |
| ATTCTTCAAAAGAATCCACA+AGG | 0.658164 | 6_1:-93573103 | None:intergenic |
| AATAGGTGATCAAGAACACA+CGG | 0.669501 | 6_1:-93570557 | None:intergenic |
| ATGGTGAGCACGACTAAACG+AGG | 0.681802 | 6_1:+93567428 | Msa0898890:five_prime_UTR |
| GTGTTGTAACTTGAAAGTGG+GGG | 0.700678 | 6_1:-93567496 | None:intergenic |
| CCTGTGAGAAGATTGCATCA+TGG | 0.710798 | 6_1:-93567628 | None:intergenic |
| TGTTGAATCTACAAGCACAG+AGG | 0.776383 | 6_1:+93571251 | Msa0898890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATCAAATTATTACA+CGG | + | chr6_1:93568158-93568177 | Msa0898890:intron | 10.0% |
| !! | GAATATTATATAATATATGT+AGG | + | chr6_1:93568339-93568358 | Msa0898890:intron | 10.0% |
| !! | ATATTATATAATATATGTAG+GGG | + | chr6_1:93568341-93568360 | Msa0898890:intron | 10.0% |
| !!! | AGACTTTTTAAATTATTAAT+CGG | - | chr6_1:93568456-93568475 | None:intergenic | 10.0% |
| !!! | TATTTTATTTTTGCTTATAT+AGG | + | chr6_1:93568678-93568697 | Msa0898890:intron | 10.0% |
| !! | TATTATTTGTTTATTTAAAG+TGG | + | chr6_1:93568772-93568791 | Msa0898890:intron | 10.0% |
| !! | TTTGAAAACTAAAAAATAAT+CGG | - | chr6_1:93569101-93569120 | None:intergenic | 10.0% |
| !! | TTACTTATTTATTTATTTAC+TGG | - | chr6_1:93569343-93569362 | None:intergenic | 10.0% |
| !! | GTAAATAAATAAATAAGTAA+AGG | + | chr6_1:93569343-93569362 | Msa0898890:intron | 10.0% |
| !! | TTAGTTATTTATTTATTTAC+TGG | - | chr6_1:93569385-93569404 | None:intergenic | 10.0% |
| !! | GTAAATAAATAAATAACTAA+AGG | + | chr6_1:93569385-93569404 | Msa0898890:intron | 10.0% |
| !!! | ATTTTATCAAATTATTACAC+GGG | + | chr6_1:93568159-93568178 | Msa0898890:intron | 15.0% |
| !! | AATGCATCTAATTTAAATTA+GGG | - | chr6_1:93568645-93568664 | None:intergenic | 15.0% |
| !! | CTAAAAATAGAAACAAATTT+CGG | - | chr6_1:93568887-93568906 | None:intergenic | 15.0% |
| !! | AAATTAAACAACATTAACAT+AGG | - | chr6_1:93569459-93569478 | None:intergenic | 15.0% |
| !!! | ATAAAATCATTTCAAGTTTA+AGG | - | chr6_1:93569891-93569910 | None:intergenic | 15.0% |
| !! | TTTCACTTATAAACAATAAT+TGG | + | chr6_1:93570126-93570145 | Msa0898890:intron | 15.0% |
| !! | ATTAAAATTTACAACATTTG+AGG | + | chr6_1:93570802-93570821 | Msa0898890:intron | 15.0% |
| !! | AAAAATTATGTTAAAGTAAG+TGG | + | chr6_1:93571442-93571461 | Msa0898890:CDS | 15.0% |
| !! | TACTTATTATGAAGTATATA+CGG | - | chr6_1:93572153-93572172 | None:intergenic | 15.0% |
| !! | AAATTTAAATACTAATCAAG+TGG | - | chr6_1:93572440-93572459 | None:intergenic | 15.0% |
| !! | ATTACTCACCAATAATATAA+TGG | + | chr6_1:93567409-93567428 | Msa0898890:five_prime_UTR | 20.0% |
| !! | AATCATATATATGTCTGTTA+CGG | - | chr6_1:93568124-93568143 | None:intergenic | 20.0% |
| !! | CAATGCATCTAATTTAAATT+AGG | - | chr6_1:93568646-93568665 | None:intergenic | 20.0% |
| !! | ATTGTGAATGTTTCTTTATT+TGG | - | chr6_1:93568728-93568747 | None:intergenic | 20.0% |
| !!! | TTAGTTTTCAAAATTACAAG+TGG | + | chr6_1:93569109-93569128 | Msa0898890:intron | 20.0% |
| !!! | TTTTATATAAAAAAGTGGGA+AGG | + | chr6_1:93569139-93569158 | Msa0898890:intron | 20.0% |
| !!! | AATTTGCTTTTATACAATCA+CGG | - | chr6_1:93569266-93569285 | None:intergenic | 20.0% |
| !! | AAATACTGCTAAATTATCTT+CGG | - | chr6_1:93569568-93569587 | None:intergenic | 20.0% |
| !! | TAATAGTATTCAATTTGTGA+TGG | + | chr6_1:93569593-93569612 | Msa0898890:intron | 20.0% |
| !! | TAGATGGTTATTACAAATTA+AGG | - | chr6_1:93571055-93571074 | None:intergenic | 20.0% |
| !! | AAACTAAATGTTATAGTAGA+TGG | - | chr6_1:93571071-93571090 | None:intergenic | 20.0% |
| !!! | TCTACTATAACATTTAGTTT+TGG | + | chr6_1:93571071-93571090 | Msa0898890:intron | 20.0% |
| !!! | TAACTTTTAAGTTTCTTTTC+AGG | + | chr6_1:93571123-93571142 | Msa0898890:intron | 20.0% |
| !!! | ACTTTAACATAATTTTTCCA+TGG | - | chr6_1:93571439-93571458 | None:intergenic | 20.0% |
| !! | ATTTGTACTTTACAATCAAT+AGG | - | chr6_1:93571791-93571810 | None:intergenic | 20.0% |
| !! | ATTTGTACTTTACAATCAAT+AGG | - | chr6_1:93571791-93571810 | None:intergenic | 20.0% |
| !! | CAATTATATCATTATGTATG+TGG | + | chr6_1:93572106-93572125 | Msa0898890:intron | 20.0% |
| !! | ATACATGTATCTTTACTATT+TGG | + | chr6_1:93572309-93572328 | Msa0898890:intron | 20.0% |
| !! | GTTTAATTGTTTCAAATCTA+AGG | + | chr6_1:93573196-93573215 | Msa0898890:CDS | 20.0% |
| !!! | TGAGTTTTTCCTTTTTTTCA+AGG | - | chr6_1:93567686-93567705 | None:intergenic | 25.0% |
| !! | TTATTCCATATATTTGAGAC+CGG | - | chr6_1:93568274-93568293 | None:intergenic | 25.0% |
| ! | TTATATAATATATGTAGGGG+CGG | + | chr6_1:93568344-93568363 | Msa0898890:intron | 25.0% |
| ! | GTATCCTTAAAAATGTCTTA+AGG | - | chr6_1:93568491-93568510 | None:intergenic | 25.0% |
| !!! | TAAATAGTGAGTTAGTTTGT+TGG | - | chr6_1:93568940-93568959 | None:intergenic | 25.0% |
| !!! | TTATGTCTTGATAGTTTGTT+TGG | - | chr6_1:93568970-93568989 | None:intergenic | 25.0% |
| !! | TTACTAGTTAGTTTAACAGT+GGG | - | chr6_1:93569000-93569019 | None:intergenic | 25.0% |
| !! | ATTACTAGTTAGTTTAACAG+TGG | - | chr6_1:93569001-93569020 | None:intergenic | 25.0% |
| !!! | ATTTGCTTTTATACAATCAC+GGG | - | chr6_1:93569265-93569284 | None:intergenic | 25.0% |
| ! | TTAATTAGCAAATTTGACCA+TGG | + | chr6_1:93569412-93569431 | Msa0898890:intron | 25.0% |
| !!! | CAAACTGGTTTTATTTTAGT+AGG | + | chr6_1:93570027-93570046 | Msa0898890:intron | 25.0% |
| !!! | TTATTTTAGTAGGTTGACTT+AGG | + | chr6_1:93570037-93570056 | Msa0898890:intron | 25.0% |
| ! | AGATACAATAACGTAACAAT+AGG | - | chr6_1:93570577-93570596 | None:intergenic | 25.0% |
| ! | TATTGTTACGTTATTGTATC+TGG | + | chr6_1:93570576-93570595 | Msa0898890:CDS | 25.0% |
| ! | ATAAGCAAGAAAAGTCTATT+GGG | - | chr6_1:93570778-93570797 | None:intergenic | 25.0% |
| ! | AATAAGCAAGAAAAGTCTAT+TGG | - | chr6_1:93570779-93570798 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAATAGCTTA+TGG | - | chr6_1:93570899-93570918 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr6_1:93571028-93571047 | Msa0898890:intron | 25.0% |
| ! | CTGATAACTTAAGTAGAAAA+AGG | - | chr6_1:93571291-93571310 | None:intergenic | 25.0% |
| ! | ACAAAATGTTTAGATATCCA+TGG | + | chr6_1:93571419-93571438 | Msa0898890:CDS | 25.0% |
| !!! | ATGTATACTTTCTGAAATAC+AGG | + | chr6_1:93571507-93571526 | Msa0898890:CDS | 25.0% |
| !!! | TTACTTCAATTTTTTCGTGT+CGG | + | chr6_1:93571584-93571603 | Msa0898890:intron | 25.0% |
| !! | ATCTAACCATTTTGCTTTAT+AGG | + | chr6_1:93571750-93571769 | Msa0898890:intron | 25.0% |
| !! | GTTTTTCCTATAAAGCAAAA+TGG | - | chr6_1:93571759-93571778 | None:intergenic | 25.0% |
| !! | ATCTAACCATTTTGCTTTAT+AGG | + | chr6_1:93571750-93571769 | Msa0898890:intron | 25.0% |
| !! | GTTTTTCCTATAAAGCAAAA+TGG | - | chr6_1:93571759-93571778 | None:intergenic | 25.0% |
| ! | ATTCAAGGAGATATATGTAT+AGG | + | chr6_1:93572054-93572073 | Msa0898890:intron | 25.0% |
| !! | TTGTGATAGTAGTTTGTAAT+AGG | + | chr6_1:93572078-93572097 | Msa0898890:intron | 25.0% |
| !!! | ATCACTTTTGATTGAATTTG+TGG | + | chr6_1:93573067-93573086 | Msa0898890:CDS | 25.0% |
| TTCCTGTGATGTTATTAGTT+CGG | - | chr6_1:93567349-93567368 | None:intergenic | 30.0% | |
| CTAATAACATCACAGGAAAA+CGG | + | chr6_1:93567351-93567370 | Msa0898890:five_prime_UTR | 30.0% | |
| ! | TAGAAAGAAAGTTGATCTAC+TGG | - | chr6_1:93567472-93567491 | None:intergenic | 30.0% |
| TTGTGTTGTAACTTGAAAGT+GGG | - | chr6_1:93567501-93567520 | None:intergenic | 30.0% | |
| TTTGTGTTGTAACTTGAAAG+TGG | - | chr6_1:93567502-93567521 | None:intergenic | 30.0% | |
| TGGAGATGAAAAATGAAAGA+GGG | - | chr6_1:93567568-93567587 | None:intergenic | 30.0% | |
| TTGGAGATGAAAAATGAAAG+AGG | - | chr6_1:93567569-93567588 | None:intergenic | 30.0% | |
| !!! | ATGAGTTTTTTGAGGAATCT+GGG | - | chr6_1:93567606-93567625 | None:intergenic | 30.0% |
| !!! | TTTTTTCAAGGAAACTGTGA+CGG | - | chr6_1:93567674-93567693 | None:intergenic | 30.0% |
| TCACAGTTTCCTTGAAAAAA+AGG | + | chr6_1:93567674-93567693 | Msa0898890:CDS | 30.0% | |
| GAAAAACTCATGTCAATGAA+AGG | + | chr6_1:93567696-93567715 | Msa0898890:CDS | 30.0% | |
| CATTGTTGTAGTGTCTTAAT+CGG | + | chr6_1:93568200-93568219 | Msa0898890:intron | 30.0% | |
| TATATAATATATGTAGGGGC+GGG | + | chr6_1:93568345-93568364 | Msa0898890:intron | 30.0% | |
| ! | TTAAGATGAATTCTAGCTAC+TGG | + | chr6_1:93568399-93568418 | Msa0898890:intron | 30.0% |
| ! | AGTGCCTTAAGACATTTTTA+AGG | + | chr6_1:93568484-93568503 | Msa0898890:intron | 30.0% |
| TAGAAACAAATTTCGGTTCA+TGG | - | chr6_1:93568880-93568899 | None:intergenic | 30.0% | |
| TGAAAAACACAGTCAATCAA+TGG | + | chr6_1:93569027-93569046 | Msa0898890:intron | 30.0% | |
| !! | ATCACAACTTTTGAGAATGA+TGG | + | chr6_1:93569188-93569207 | Msa0898890:intron | 30.0% |
| ATCACTATCATTCTCACAAT+TGG | - | chr6_1:93569224-93569243 | None:intergenic | 30.0% | |
| !! | CCAAGTGTTTCTAGAATAAT+CGG | - | chr6_1:93569494-93569513 | None:intergenic | 30.0% |
| ! | CAAACTCGATTTGTAAATTG+AGG | - | chr6_1:93569853-93569872 | None:intergenic | 30.0% |
| ! | AAGCTTGATGAAAGGTTTTT+AGG | - | chr6_1:93570070-93570089 | None:intergenic | 30.0% |
| AGGTATAAGCTAAGGAAAAA+AGG | - | chr6_1:93570446-93570465 | None:intergenic | 30.0% | |
| GAAAAACAAGGTATAAGCTA+AGG | - | chr6_1:93570454-93570473 | None:intergenic | 30.0% | |
| AGCATACTATCAGAAAAACA+AGG | - | chr6_1:93570466-93570485 | None:intergenic | 30.0% | |
| ! | TAGTATGCTATGTGATTTGT+AGG | + | chr6_1:93570477-93570496 | Msa0898890:intron | 30.0% |
| AAAGCTATATCCAACAATGA+AGG | + | chr6_1:93570518-93570537 | Msa0898890:CDS | 30.0% | |
| TATTCATAAGCCTTCATTGT+TGG | - | chr6_1:93570531-93570550 | None:intergenic | 30.0% | |
| ACAATGAAGGCTTATGAATA+TGG | + | chr6_1:93570531-93570550 | Msa0898890:CDS | 30.0% | |
| ATGTGTGCATATATCCAATA+TGG | + | chr6_1:93570682-93570701 | Msa0898890:CDS | 30.0% | |
| TGTGTGCATATATCCAATAT+GGG | + | chr6_1:93570683-93570702 | Msa0898890:CDS | 30.0% | |
| AAGATTATGTAGATCTTCAC+CGG | - | chr6_1:93570709-93570728 | None:intergenic | 30.0% | |
| CTTGTTGCAAAAAATTTCAC+AGG | + | chr6_1:93570726-93570745 | Msa0898890:CDS | 30.0% | |
| TTACAAATTAAGGTCCTGTT+TGG | - | chr6_1:93571045-93571064 | None:intergenic | 30.0% | |
| TATCGTATTCAACACAGTTA+AGG | - | chr6_1:93571164-93571183 | None:intergenic | 30.0% | |
| TTAACTGTGTTGAATACGAT+AGG | + | chr6_1:93571163-93571182 | Msa0898890:CDS | 30.0% | |
| TAACTGTGTTGAATACGATA+GGG | + | chr6_1:93571164-93571183 | Msa0898890:CDS | 30.0% | |
| ! | TGATACGTAAGAATTTTCGA+TGG | - | chr6_1:93571192-93571211 | None:intergenic | 30.0% |
| ! | AGCAAAATGGTTAGATTTTG+TGG | - | chr6_1:93571746-93571765 | None:intergenic | 30.0% |
| CTTTACAATCAATAGGAACT+GGG | - | chr6_1:93571784-93571803 | None:intergenic | 30.0% | |
| ACTTTACAATCAATAGGAAC+TGG | - | chr6_1:93571785-93571804 | None:intergenic | 30.0% | |
| ! | AGCAAAATGGTTAGATTTTG+TGG | - | chr6_1:93571746-93571765 | None:intergenic | 30.0% |
| CTTTACAATCAATAGGAACT+GGG | - | chr6_1:93571784-93571803 | None:intergenic | 30.0% | |
| ACTTTACAATCAATAGGAAC+TGG | - | chr6_1:93571785-93571804 | None:intergenic | 30.0% | |
| TCCTTGAATTTGATATGAAG+GGG | - | chr6_1:93572043-93572062 | None:intergenic | 30.0% | |
| CTCCTTGAATTTGATATGAA+GGG | - | chr6_1:93572044-93572063 | None:intergenic | 30.0% | |
| TCTCCTTGAATTTGATATGA+AGG | - | chr6_1:93572045-93572064 | None:intergenic | 30.0% | |
| TAAGTAACTAGAATACTGCT+AGG | + | chr6_1:93572167-93572186 | Msa0898890:intron | 30.0% | |
| GCTTAGTACTAAATCATGTA+TGG | + | chr6_1:93572277-93572296 | Msa0898890:intron | 30.0% | |
| TAGTACTAAATCATGTATGG+CGG | + | chr6_1:93572280-93572299 | Msa0898890:intron | 30.0% | |
| AGGATATATATTAGCGCTAT+AGG | - | chr6_1:93572394-93572413 | None:intergenic | 30.0% | |
| TAGTAAACGTGTATTTGCAT+AGG | - | chr6_1:93572496-93572515 | None:intergenic | 30.0% | |
| !! | AAACCTCGTTTTTGTGAAAT+AGG | + | chr6_1:93572515-93572534 | Msa0898890:intron | 30.0% |
| CGGTAACAAAGTTAAAAAGA+TGG | + | chr6_1:93572617-93572636 | Msa0898890:CDS | 30.0% | |
| GTTAAAAAGATGGAGAAACT+AGG | + | chr6_1:93572627-93572646 | Msa0898890:CDS | 30.0% | |
| TTTCTTCATCCATTTGTAAG+AGG | - | chr6_1:93572791-93572810 | None:intergenic | 30.0% | |
| AGTTAGAGTTCCAAAAAGTT+GGG | + | chr6_1:93572863-93572882 | Msa0898890:CDS | 30.0% | |
| ! | AGATTTTCTTCCCAACTTTT+TGG | - | chr6_1:93572876-93572895 | None:intergenic | 30.0% |
| AGCAGGTTTAATGATGTTAT+CGG | - | chr6_1:93572907-93572926 | None:intergenic | 30.0% | |
| ! | TTTCCTAAACATGTTTTCGT+CGG | - | chr6_1:93572940-93572959 | None:intergenic | 30.0% |
| !! | TTTGATTCTTCCACTTTTGT+TGG | - | chr6_1:93573005-93573024 | None:intergenic | 30.0% |
| TAATGAACTAGCACTTTCAT+AGG | - | chr6_1:93573030-93573049 | None:intergenic | 30.0% | |
| !! | TTTTGATTGAATTTGTGGCT+AGG | + | chr6_1:93573072-93573091 | Msa0898890:CDS | 30.0% |
| ATTCTTCAAAAGAATCCACA+AGG | - | chr6_1:93573106-93573125 | None:intergenic | 30.0% | |
| !! | GTGGATTCTTTTGAAGAATT+AGG | + | chr6_1:93573107-93573126 | Msa0898890:CDS | 30.0% |
| AAGGATTGACATATACACTT+AGG | + | chr6_1:93573215-93573234 | Msa0898890:exon | 30.0% | |
| TGGTGAGTAATAGAAGACTT+TGG | - | chr6_1:93567400-93567419 | None:intergenic | 35.0% | |
| CGTGCTCACCATTATATTAT+TGG | - | chr6_1:93567420-93567439 | None:intergenic | 35.0% | |
| TGTGTTGTAACTTGAAAGTG+GGG | - | chr6_1:93567500-93567519 | None:intergenic | 35.0% | |
| GGAGATGAAAAATGAAAGAG+GGG | - | chr6_1:93567567-93567586 | None:intergenic | 35.0% | |
| !!! | TGAGTTTTTTGAGGAATCTG+GGG | - | chr6_1:93567605-93567624 | None:intergenic | 35.0% |
| !!! | GATGAGTTTTTTGAGGAATC+TGG | - | chr6_1:93567607-93567626 | None:intergenic | 35.0% |
| !!! | TCATGGTGATGAGTTTTTTG+AGG | - | chr6_1:93567614-93567633 | None:intergenic | 35.0% |
| AAACTCATGTCAATGAAAGG+TGG | + | chr6_1:93567699-93567718 | Msa0898890:CDS | 35.0% | |
| ! | TTTGTGTTTTCAGCGAAGAT+GGG | + | chr6_1:93567906-93567925 | Msa0898890:CDS | 35.0% |
| ! | AGACATTCGATCAGAAGTAT+CGG | - | chr6_1:93568085-93568104 | None:intergenic | 35.0% |
| AGACACTACAACAATGTCAT+TGG | - | chr6_1:93568196-93568215 | None:intergenic | 35.0% | |
| AATGCTAATAAGTGCCCTAA+GGG | - | chr6_1:93568621-93568640 | None:intergenic | 35.0% | |
| AAATGCTAATAAGTGCCCTA+AGG | - | chr6_1:93568622-93568641 | None:intergenic | 35.0% | |
| TTGCTTATATAGGAGACTAG+AGG | + | chr6_1:93568688-93568707 | Msa0898890:intron | 35.0% | |
| !!! | AGTGGGAAGGAGAAATTTTT+TGG | + | chr6_1:93569152-93569171 | Msa0898890:intron | 35.0% |
| ATTAGCAAATTTGACCATGG+TGG | + | chr6_1:93569415-93569434 | Msa0898890:intron | 35.0% | |
| TTAGCAAATTTGACCATGGT+GGG | + | chr6_1:93569416-93569435 | Msa0898890:intron | 35.0% | |
| ! | CCGATTATTCTAGAAACACT+TGG | + | chr6_1:93569491-93569510 | Msa0898890:intron | 35.0% |
| GAAAATATGCTCTTCAACCA+TGG | + | chr6_1:93569516-93569535 | Msa0898890:intron | 35.0% | |
| TGTGTCATAATATCAGACCT+GGG | - | chr6_1:93569545-93569564 | None:intergenic | 35.0% | |
| ! | ATTTGTGATGGTGAAATCAC+AGG | + | chr6_1:93569605-93569624 | Msa0898890:intron | 35.0% |
| ACAATCTTCACCTTACAAGT+TGG | + | chr6_1:93569809-93569828 | Msa0898890:intron | 35.0% | |
| GATCTATTCAAGCCATATGT+CGG | - | chr6_1:93569955-93569974 | None:intergenic | 35.0% | |
| GAAGTTCACACTTTACAAAC+TGG | + | chr6_1:93570012-93570031 | Msa0898890:intron | 35.0% | |
| !!! | GATGAAAGGTTTTTAGGTTC+TGG | - | chr6_1:93570064-93570083 | None:intergenic | 35.0% |
| CTTTCATCAAGCTTTCCATT+GGG | + | chr6_1:93570076-93570095 | Msa0898890:intron | 35.0% | |
| TGGTCACAATATATTTGTGC+AGG | + | chr6_1:93570146-93570165 | Msa0898890:intron | 35.0% | |
| AAAGGTCTAAACAGAGGATT+AGG | + | chr6_1:93570182-93570201 | Msa0898890:intron | 35.0% | |
| AAGGTCTAAACAGAGGATTA+GGG | + | chr6_1:93570183-93570202 | Msa0898890:intron | 35.0% | |
| ATTGGGAATGCTGTCAAAAT+TGG | + | chr6_1:93570335-93570354 | Msa0898890:intron | 35.0% | |
| GTGGGAAGAAATTGTAATCA+TGG | + | chr6_1:93570371-93570390 | Msa0898890:intron | 35.0% | |
| ATGGTTAGCATCTTCATTGT+AGG | + | chr6_1:93570390-93570409 | Msa0898890:intron | 35.0% | |
| ! | TGGATATAGCTTTGCATATG+TGG | - | chr6_1:93570511-93570530 | None:intergenic | 35.0% |
| AATAGGTGATCAAGAACACA+CGG | - | chr6_1:93570560-93570579 | None:intergenic | 35.0% | |
| ATTGTATCTGGATATCGAAC+CGG | + | chr6_1:93570588-93570607 | Msa0898890:CDS | 35.0% | |
| ! | AGATTTTTGCTCATTGCTCT+TGG | + | chr6_1:93570636-93570655 | Msa0898890:CDS | 35.0% |
| ! | GCATTTGTGTGTTGTTGATT+CGG | + | chr6_1:93571356-93571375 | Msa0898890:intron | 35.0% |
| !! | GAAGATGAGTTTTGCTATCT+GGG | + | chr6_1:93571378-93571397 | Msa0898890:intron | 35.0% |
| ! | AACATTTTGTAACGACCATG+AGG | - | chr6_1:93571409-93571428 | None:intergenic | 35.0% |
| CGTAGAAAATGTTGCTACAT+AGG | - | chr6_1:93571535-93571554 | None:intergenic | 35.0% | |
| CAAGAATCAAACGTCATTTC+TGG | - | chr6_1:93571688-93571707 | None:intergenic | 35.0% | |
| CAGAAATGACGTTTGATTCT+TGG | + | chr6_1:93571686-93571705 | Msa0898890:intron | 35.0% | |
| CAAGAATCAAACGTCATTTC+TGG | - | chr6_1:93571688-93571707 | None:intergenic | 35.0% | |
| CAGAAATGACGTTTGATTCT+TGG | + | chr6_1:93571686-93571705 | Msa0898890:intron | 35.0% | |
| CCTTGAATTTGATATGAAGG+GGG | - | chr6_1:93572042-93572061 | None:intergenic | 35.0% | |
| ACCACAGATTGCAGAAAATA+GGG | + | chr6_1:93572215-93572234 | Msa0898890:intron | 35.0% | |
| !! | AAAGGAGTGTTGTCAAATAG+AGG | - | chr6_1:93572414-93572433 | None:intergenic | 35.0% |
| ATACTAATCAAGTGGTGCAA+AGG | - | chr6_1:93572432-93572451 | None:intergenic | 35.0% | |
| TTACCTTCTTAAGCTCTTTG+CGG | - | chr6_1:93572566-93572585 | None:intergenic | 35.0% | |
| TGAGAAACATTCTCGTTTCT+TGG | - | chr6_1:93572765-93572784 | None:intergenic | 35.0% | |
| TTCTCAAGACCTCTTACAAA+TGG | + | chr6_1:93572779-93572798 | Msa0898890:CDS | 35.0% | |
| GGATGAAGAAAGACATTTCT+TGG | + | chr6_1:93572800-93572819 | Msa0898890:CDS | 35.0% | |
| CAGTTAGAGTTCCAAAAAGT+TGG | + | chr6_1:93572862-93572881 | Msa0898890:CDS | 35.0% | |
| GCAGGTTTAATGATGTTATC+GGG | - | chr6_1:93572906-93572925 | None:intergenic | 35.0% | |
| TTACCGACGAAAACATGTTT+AGG | + | chr6_1:93572934-93572953 | Msa0898890:CDS | 35.0% | |
| AGGTGAGAAAGCAAAGTTTA+AGG | + | chr6_1:93573127-93573146 | Msa0898890:CDS | 35.0% | |
| !! | CAAGTTCTTGTTGTTCAAGA+GGG | - | chr6_1:93573154-93573173 | None:intergenic | 35.0% |
| !! | ACAAGTTCTTGTTGTTCAAG+AGG | - | chr6_1:93573155-93573174 | None:intergenic | 35.0% |
| CAACAAGAACTTGTAACATC+TGG | + | chr6_1:93573161-93573180 | Msa0898890:CDS | 35.0% | |
| AAGAACTTGTAACATCTGGT+TGG | + | chr6_1:93573165-93573184 | Msa0898890:CDS | 35.0% | |
| AGCCGAACTAATAACATCAC+AGG | + | chr6_1:93567344-93567363 | Msa0898890:five_prime_UTR | 40.0% | |
| ! | AAGTTGATCTACTGGTCTGT+TGG | - | chr6_1:93567464-93567483 | None:intergenic | 40.0% |
| GTGTTGTAACTTGAAAGTGG+GGG | - | chr6_1:93567499-93567518 | None:intergenic | 40.0% | |
| GTTTGTTTGAAGATTGTGGG+GGG | - | chr6_1:93567545-93567564 | None:intergenic | 40.0% | |
| ! | GGTTTGTTTGAAGATTGTGG+GGG | - | chr6_1:93567546-93567565 | None:intergenic | 40.0% |
| ! | GGGTTTGTTTGAAGATTGTG+GGG | - | chr6_1:93567547-93567566 | None:intergenic | 40.0% |
| ! | GGGGTTTGTTTGAAGATTGT+GGG | - | chr6_1:93567548-93567567 | None:intergenic | 40.0% |
| ! | AGGGGTTTGTTTGAAGATTG+TGG | - | chr6_1:93567549-93567568 | None:intergenic | 40.0% |
| !!! | GAATCTGGGGAAGTTTTTTG+AGG | - | chr6_1:93567592-93567611 | None:intergenic | 40.0% |
| CATGATGCAATCTTCTCACA+GGG | + | chr6_1:93567629-93567648 | Msa0898890:exon | 40.0% | |
| AATGTAGTCATCATCGTCGT+CGG | - | chr6_1:93567769-93567788 | None:intergenic | 40.0% | |
| ! | TCGTTTCGAGGATTTTCAGA+TGG | + | chr6_1:93567807-93567826 | Msa0898890:CDS | 40.0% |
| ! | CGTTTCGAGGATTTTCAGAT+GGG | + | chr6_1:93567808-93567827 | Msa0898890:CDS | 40.0% |
| ! | CTGGAAGAATTTGAAACGTG+TGG | + | chr6_1:93567842-93567861 | Msa0898890:CDS | 40.0% |
| ! | GAAGAATTTGAAACGTGTGG+CGG | + | chr6_1:93567845-93567864 | Msa0898890:CDS | 40.0% |
| ! | AAGAATTTGAAACGTGTGGC+GGG | + | chr6_1:93567846-93567865 | Msa0898890:CDS | 40.0% |
| GCTGAAAACACAAACTTCCT+TGG | - | chr6_1:93567900-93567919 | None:intergenic | 40.0% | |
| ! | GTTTGTGTTTTCAGCGAAGA+TGG | + | chr6_1:93567905-93567924 | Msa0898890:CDS | 40.0% |
| TACTTCCCAACATCTGGAAA+CGG | - | chr6_1:93567975-93567994 | None:intergenic | 40.0% | |
| !! | ATGTTGGGAAGTACTCTGTT+TGG | + | chr6_1:93567982-93568001 | Msa0898890:CDS | 40.0% |
| !! | TGTTGGGAAGTACTCTGTTT+GGG | + | chr6_1:93567983-93568002 | Msa0898890:CDS | 40.0% |
| ! | GTCGTCTTTGAGTTCAGTAT+AGG | + | chr6_1:93568023-93568042 | Msa0898890:CDS | 40.0% |
| CACTACAACAATGTCATTGG+TGG | - | chr6_1:93568193-93568212 | None:intergenic | 40.0% | |
| AAGACACAAACACGGTTACA+TGG | - | chr6_1:93568229-93568248 | None:intergenic | 40.0% | |
| TACGAAGCAAGACACAAACA+CGG | - | chr6_1:93568237-93568256 | None:intergenic | 40.0% | |
| TCCATCCGGTCTCAAATATA+TGG | + | chr6_1:93568266-93568285 | Msa0898890:intron | 40.0% | |
| ! | TCCATATATTTGAGACCGGA+TGG | - | chr6_1:93568270-93568289 | None:intergenic | 40.0% |
| GTGAATAACTATCGTGTCAG+AGG | - | chr6_1:93568378-93568397 | None:intergenic | 40.0% | |
| !! | TGTTCTTAAAGAGTGCCCTT+AGG | + | chr6_1:93568603-93568622 | Msa0898890:intron | 40.0% |
| !! | GTTCTTAAAGAGTGCCCTTA+GGG | + | chr6_1:93568604-93568623 | Msa0898890:intron | 40.0% |
| ! | AACAATTTTCTGTCCCACCA+TGG | - | chr6_1:93569432-93569451 | None:intergenic | 40.0% |
| GTGTGTCATAATATCAGACC+TGG | - | chr6_1:93569546-93569565 | None:intergenic | 40.0% | |
| CGCTTTACAACCAACTTGTA+AGG | - | chr6_1:93569822-93569841 | None:intergenic | 40.0% | |
| CATATGACAAGTCCGACATA+TGG | + | chr6_1:93569940-93569959 | Msa0898890:intron | 40.0% | |
| CCAATGGAAAGCTTGATGAA+AGG | - | chr6_1:93570078-93570097 | None:intergenic | 40.0% | |
| CCTTTCATCAAGCTTTCCAT+TGG | + | chr6_1:93570075-93570094 | Msa0898890:intron | 40.0% | |
| ! | TACTTGTCTTGTTGACCCAA+TGG | - | chr6_1:93570094-93570113 | None:intergenic | 40.0% |
| CTTAGCAAAGGTCTAAACAG+AGG | + | chr6_1:93570176-93570195 | Msa0898890:intron | 40.0% | |
| TGCTGTATGAAGAAAGTCTC+CGG | - | chr6_1:93570610-93570629 | None:intergenic | 40.0% | |
| TGCATATATCCAATATGGGC+CGG | + | chr6_1:93570687-93570706 | Msa0898890:CDS | 40.0% | |
| ! | TACAACATTTGAGGCCTGTT+TGG | + | chr6_1:93570811-93570830 | Msa0898890:intron | 40.0% |
| ! | ACAACATTTGAGGCCTGTTT+GGG | + | chr6_1:93570812-93570831 | Msa0898890:intron | 40.0% |
| ATAAGTCGTTCTCGTAAGCT+CGG | - | chr6_1:93570869-93570888 | None:intergenic | 40.0% | |
| !! | GCTGTTTTCATAAGCTATCC+TGG | - | chr6_1:93570934-93570953 | None:intergenic | 40.0% |
| ! | GTATCAAGCTTCTGATGATG+TGG | + | chr6_1:93571206-93571225 | Msa0898890:CDS | 40.0% |
| ! | TCTGATGATGTGGTTTACAG+CGG | + | chr6_1:93571216-93571235 | Msa0898890:CDS | 40.0% |
| TGTTGAATCTACAAGCACAG+AGG | + | chr6_1:93571251-93571270 | Msa0898890:CDS | 40.0% | |
| !! | GGAAGATGAGTTTTGCTATC+TGG | + | chr6_1:93571377-93571396 | Msa0898890:intron | 40.0% |
| ! | ATTTTGTAACGACCATGAGG+TGG | - | chr6_1:93571406-93571425 | None:intergenic | 40.0% |
| ! | TTAAAGTAAGTGGAGCACTC+AGG | + | chr6_1:93571452-93571471 | Msa0898890:CDS | 40.0% |
| ! | ACTCAGGCATTGTGCATTTA+TGG | + | chr6_1:93571468-93571487 | Msa0898890:CDS | 40.0% |
| GCATTGTGCATTTATGGTCA+TGG | + | chr6_1:93571474-93571493 | Msa0898890:CDS | 40.0% | |
| TTTATGGTCATGGCTATGCA+TGG | + | chr6_1:93571484-93571503 | Msa0898890:CDS | 40.0% | |
| CCCCCTTCATATCAAATTCA+AGG | + | chr6_1:93572039-93572058 | Msa0898890:intron | 40.0% | |
| GTAACTAGAATACTGCTAGG+TGG | + | chr6_1:93572170-93572189 | Msa0898890:intron | 40.0% | |
| GGTCAACAACATTGTGCAAA+GGG | - | chr6_1:93572198-93572217 | None:intergenic | 40.0% | |
| TGGTCAACAACATTGTGCAA+AGG | - | chr6_1:93572199-93572218 | None:intergenic | 40.0% | |
| GACCACAGATTGCAGAAAAT+AGG | + | chr6_1:93572214-93572233 | Msa0898890:intron | 40.0% | |
| CCACAGATTGCAGAAAATAG+GGG | + | chr6_1:93572216-93572235 | Msa0898890:intron | 40.0% | |
| GAGCCTATTTCACAAAAACG+AGG | - | chr6_1:93572521-93572540 | None:intergenic | 40.0% | |
| ! | TTTTGTGAAATAGGCTCCAG+CGG | + | chr6_1:93572524-93572543 | Msa0898890:intron | 40.0% |
| TTTCCGCAAAGAGCTTAAGA+AGG | + | chr6_1:93572560-93572579 | Msa0898890:CDS | 40.0% | |
| ACTAAAGTTCTACGCGAACT+CGG | + | chr6_1:93572597-93572616 | Msa0898890:CDS | 40.0% | |
| TTCTTGTAAATGCAGAGCTG+TGG | + | chr6_1:93572724-93572743 | Msa0898890:CDS | 40.0% | |
| TCTTGTAAATGCAGAGCTGT+GGG | + | chr6_1:93572725-93572744 | Msa0898890:CDS | 40.0% | |
| AGATGTGAAGACAAAGATGC+TGG | - | chr6_1:93572963-93572982 | None:intergenic | 40.0% | |
| AGAAGATGCACCAACAAAAG+TGG | + | chr6_1:93572992-93573011 | Msa0898890:CDS | 40.0% | |
| TTGTAACATCTGGTTGGACT+AGG | + | chr6_1:93573171-93573190 | Msa0898890:CDS | 40.0% | |
| !! | CTACTGGTCTGTTGGTAATG+CGG | - | chr6_1:93567456-93567475 | None:intergenic | 45.0% |
| TGTAACTTGAAAGTGGGGGA+GGG | - | chr6_1:93567495-93567514 | None:intergenic | 45.0% | |
| TTGTAACTTGAAAGTGGGGG+AGG | - | chr6_1:93567496-93567515 | None:intergenic | 45.0% | |
| !!! | CTGGGGAAGTTTTTTGAGGT+TGG | - | chr6_1:93567588-93567607 | None:intergenic | 45.0% |
| CCTGTGAGAAGATTGCATCA+TGG | - | chr6_1:93567631-93567650 | None:intergenic | 45.0% | |
| CCATGATGCAATCTTCTCAC+AGG | + | chr6_1:93567628-93567647 | Msa0898890:exon | 45.0% | |
| ! | TTCAAGGAAACTGTGACGGA+AGG | - | chr6_1:93567670-93567689 | None:intergenic | 45.0% |
| CTCATGTCAATGAAAGGTGG+CGG | + | chr6_1:93567702-93567721 | Msa0898890:CDS | 45.0% | |
| ACAAATCGGCATCCCTTTAC+CGG | + | chr6_1:93567740-93567759 | Msa0898890:CDS | 45.0% | |
| ATGACTACATTCGCCAACGA+CGG | + | chr6_1:93567778-93567797 | Msa0898890:CDS | 45.0% | |
| ! | AGGATTTTCAGATGGGATCG+TGG | + | chr6_1:93567815-93567834 | Msa0898890:CDS | 45.0% |
| ! | AGAATTTGAAACGTGTGGCG+GGG | + | chr6_1:93567847-93567866 | Msa0898890:CDS | 45.0% |
| !! | GTTTTCAGCGAAGATGGGTT+TGG | + | chr6_1:93567911-93567930 | Msa0898890:CDS | 45.0% |
| AAACAGCCGTTTCCAGATGT+TGG | + | chr6_1:93567966-93567985 | Msa0898890:CDS | 45.0% | |
| AACAGCCGTTTCCAGATGTT+GGG | + | chr6_1:93567967-93567986 | Msa0898890:CDS | 45.0% | |
| ! | ACAGAGTACTTCCCAACATC+TGG | - | chr6_1:93567981-93568000 | None:intergenic | 45.0% |
| TCGTAGTGACTTACTCCATC+CGG | + | chr6_1:93568252-93568271 | Msa0898890:intron | 45.0% | |
| !! | TCCATGTTCTGCGTTGACTA+TGG | + | chr6_1:93569755-93569774 | Msa0898890:intron | 45.0% |
| TCCATAGTCAACGCAGAACA+TGG | - | chr6_1:93569759-93569778 | None:intergenic | 45.0% | |
| ATGTCGGACTTGTCATATGC+TGG | - | chr6_1:93569939-93569958 | None:intergenic | 45.0% | |
| ! | TGGAGGACTTGCTTTAGCAT+TGG | + | chr6_1:93570317-93570336 | Msa0898890:intron | 45.0% |
| ! | GGAGGACTTGCTTTAGCATT+GGG | + | chr6_1:93570318-93570337 | Msa0898890:intron | 45.0% |
| GGAATGCTGTCAAAATTGGC+TGG | + | chr6_1:93570339-93570358 | Msa0898890:intron | 45.0% | |
| ACAATTTCTTCCCACTGTCC+AGG | - | chr6_1:93570366-93570385 | None:intergenic | 45.0% | |
| GGCGTAGCAACATCATTAGA+AGG | + | chr6_1:93570747-93570766 | Msa0898890:CDS | 45.0% | |
| CTTATTGCCATAAGCTCACC+AGG | + | chr6_1:93570913-93570932 | Msa0898890:intron | 45.0% | |
| AAGCTATCCTGGTGAGCTTA+TGG | - | chr6_1:93570923-93570942 | None:intergenic | 45.0% | |
| TACAAGCACAGAGGATGCAT+TGG | + | chr6_1:93571260-93571279 | Msa0898890:CDS | 45.0% | |
| ! | CTTCAGATTAAAGGCGTGTC+TGG | - | chr6_1:93571636-93571655 | None:intergenic | 45.0% |
| ! | ACGCCTTTAATCTGAAGCGT+CGG | + | chr6_1:93571639-93571658 | Msa0898890:intron | 45.0% |
| ! | GTACCGACGCTTCAGATTAA+AGG | - | chr6_1:93571645-93571664 | None:intergenic | 45.0% |
| GGGCAGAGGATAACAAAAAG+GGG | - | chr6_1:93572022-93572041 | None:intergenic | 45.0% | |
| GGGGCAGAGGATAACAAAAA+GGG | - | chr6_1:93572023-93572042 | None:intergenic | 45.0% | |
| ATTTGATATGAAGGGGGCAG+AGG | - | chr6_1:93572036-93572055 | None:intergenic | 45.0% | |
| ! | CCCCTATTTTCTGCAATCTG+TGG | - | chr6_1:93572219-93572238 | None:intergenic | 45.0% |
| GCTATGCTGCAGTCACTATT+TGG | + | chr6_1:93572253-93572272 | Msa0898890:intron | 45.0% | |
| AAAACTTGTCTCTTCTCCGC+TGG | - | chr6_1:93572543-93572562 | None:intergenic | 45.0% | |
| GCGTAGAACTTTAGTCGCTT+CGG | - | chr6_1:93572592-93572611 | None:intergenic | 45.0% | |
| AATGCAGAGCTGTGGGAAAT+AGG | + | chr6_1:93572732-93572751 | Msa0898890:CDS | 45.0% | |
| AGCTGTGGGAAATAGGTAAC+AGG | + | chr6_1:93572739-93572758 | Msa0898890:CDS | 45.0% | |
| TCGTCGGTAACAACATTAGC+AGG | - | chr6_1:93572924-93572943 | None:intergenic | 45.0% | |
| !! | AATATTATATAATATATGTA+GGG | + | chr6_1:93568340-93568359 | Msa0898890:intron | 5.0% |
| !!! | ATTTTTTTTATATAAAAAAG+TGG | + | chr6_1:93569134-93569153 | Msa0898890:intron | 5.0% |
| !!! | TTTTTTTTATATAAAAAAGT+GGG | + | chr6_1:93569135-93569154 | Msa0898890:intron | 5.0% |
| !! | ATGAATAAATAAATAAATAA+AGG | + | chr6_1:93569302-93569321 | Msa0898890:intron | 5.0% |
| ATGGTGAGCACGACTAAACG+AGG | + | chr6_1:93567428-93567447 | Msa0898890:five_prime_UTR | 50.0% | |
| ! | TTCTCACAGGGTACCCAAAC+TGG | + | chr6_1:93567641-93567660 | Msa0898890:CDS | 50.0% |
| ! | TCTCACAGGGTACCCAAACT+GGG | + | chr6_1:93567642-93567661 | Msa0898890:CDS | 50.0% |
| TGACGGAAGGAACCCAGTTT+GGG | - | chr6_1:93567657-93567676 | None:intergenic | 50.0% | |
| ! | ATGTCAATGAAAGGTGGCGG+TGG | + | chr6_1:93567705-93567724 | Msa0898890:CDS | 50.0% |
| GGCGGTGGGTATTCACAAAT+CGG | + | chr6_1:93567726-93567745 | Msa0898890:CDS | 50.0% | |
| TCATCATCGTCGTCGGATTC+CGG | - | chr6_1:93567762-93567781 | None:intergenic | 50.0% | |
| GAAACGAAAACCACCGTCGT+TGG | - | chr6_1:93567794-93567813 | None:intergenic | 50.0% | |
| AGATGGGTGTGTCTGATCCA+AGG | + | chr6_1:93567880-93567899 | Msa0898890:CDS | 50.0% | |
| ! | GCGAGTTTAGCTCAGTTCGT+AGG | + | chr6_1:93568317-93568336 | Msa0898890:intron | 50.0% |
| ATATCAGACCTGGGTCACCA+TGG | - | chr6_1:93569536-93569555 | None:intergenic | 50.0% | |
| GCAGGAGCAACTCTTAGCAA+AGG | + | chr6_1:93570164-93570183 | Msa0898890:intron | 50.0% | |
| CTGTCAAAATTGGCTGGACC+TGG | + | chr6_1:93570345-93570364 | Msa0898890:intron | 50.0% | |
| !! | CTTGGTGCTGCTGTATCTGT+TGG | + | chr6_1:93570654-93570673 | Msa0898890:CDS | 50.0% |
| AGATCTTCACCGGCCCATAT+TGG | - | chr6_1:93570699-93570718 | None:intergenic | 50.0% | |
| ! | TTTGAGGCCTGTTTGGGTAC+TGG | + | chr6_1:93570818-93570837 | Msa0898890:intron | 50.0% |
| GTTTGTGCCAGTACCCAAAC+AGG | - | chr6_1:93570828-93570847 | None:intergenic | 50.0% | |
| GGGGGCAGAGGATAACAAAA+AGG | - | chr6_1:93572024-93572043 | None:intergenic | 50.0% | |
| GGCTAGGCTACAAAACCTTG+TGG | + | chr6_1:93573088-93573107 | Msa0898890:CDS | 50.0% | |
| ! | GTGACGGAAGGAACCCAGTT+TGG | - | chr6_1:93567658-93567677 | None:intergenic | 55.0% |
| ! | TCAATGAAAGGTGGCGGTGG+CGG | + | chr6_1:93567708-93567727 | Msa0898890:CDS | 55.0% |
| CGTCGTCGGATTCCGGTAAA+GGG | - | chr6_1:93567755-93567774 | None:intergenic | 55.0% | |
| TCGTCGTCGGATTCCGGTAA+AGG | - | chr6_1:93567756-93567775 | None:intergenic | 55.0% | |
| ACTACATTCGCCAACGACGG+TGG | + | chr6_1:93567781-93567800 | Msa0898890:CDS | 55.0% | |
| ! | CGACGGTGGTTTTCGTTTCG+AGG | + | chr6_1:93567795-93567814 | Msa0898890:CDS | 55.0% |
| CAGATGGGATCGTGGAGTTC+TGG | + | chr6_1:93567823-93567842 | Msa0898890:CDS | 55.0% | |
| TGTCTGTTACGGCGTCAGAC+TGG | - | chr6_1:93568113-93568132 | None:intergenic | 55.0% | |
| CTCTTCAACCATGGTGACCC+AGG | + | chr6_1:93569525-93569544 | Msa0898890:intron | 55.0% | |
| AATTGGCTGGACCTGGACAG+TGG | + | chr6_1:93570352-93570371 | Msa0898890:intron | 55.0% | |
| ATTGGCTGGACCTGGACAGT+GGG | + | chr6_1:93570353-93570372 | Msa0898890:intron | 55.0% | |
| ! | AACGTGTGGCGGGGAAAGCA+TGG | + | chr6_1:93567856-93567875 | Msa0898890:CDS | 60.0% |
| ! | ACGTGTGGCGGGGAAAGCAT+GGG | + | chr6_1:93567857-93567876 | Msa0898890:CDS | 60.0% |
| ! | GCGGGGAAAGCATGGGAGAT+GGG | + | chr6_1:93567864-93567883 | Msa0898890:CDS | 60.0% |
| GCTATCTGGGAGCCACCTCA+TGG | + | chr6_1:93571391-93571410 | Msa0898890:CDS | 60.0% | |
| ! | ATGAAAGGTGGCGGTGGCGG+TGG | + | chr6_1:93567711-93567730 | Msa0898890:CDS | 65.0% |
| ! | TGAAAGGTGGCGGTGGCGGT+GGG | + | chr6_1:93567712-93567731 | Msa0898890:CDS | 65.0% |
| ! | GGCGGGGAAAGCATGGGAGA+TGG | + | chr6_1:93567863-93567882 | Msa0898890:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 93567343 | 93573243 | 93567343 | ID=Msa0898890;Name=Msa0898890 |
| chr6_1 | mRNA | 93567343 | 93573243 | 93567343 | ID=Msa0898890-mRNA-1;Parent=Msa0898890;Name=Msa0898890-mRNA-1;_AED=0.06;_eAED=0.06;_QI=287|0.75|1|1|1|1|5|20|551 |
| chr6_1 | exon | 93567343 | 93568044 | 93567343 | ID=Msa0898890-mRNA-1:exon:15875;Parent=Msa0898890-mRNA-1 |
| chr6_1 | exon | 93570499 | 93570768 | 93570499 | ID=Msa0898890-mRNA-1:exon:15876;Parent=Msa0898890-mRNA-1 |
| chr6_1 | exon | 93571145 | 93571281 | 93571145 | ID=Msa0898890-mRNA-1:exon:15877;Parent=Msa0898890-mRNA-1 |
| chr6_1 | exon | 93571382 | 93571528 | 93571382 | ID=Msa0898890-mRNA-1:exon:15878;Parent=Msa0898890-mRNA-1 |
| chr6_1 | exon | 93572537 | 93573243 | 93572537 | ID=Msa0898890-mRNA-1:exon:15879;Parent=Msa0898890-mRNA-1 |
| chr6_1 | five_prime_UTR | 93567343 | 93567629 | 93567343 | ID=Msa0898890-mRNA-1:five_prime_utr;Parent=Msa0898890-mRNA-1 |
| chr6_1 | CDS | 93567630 | 93568044 | 93567630 | ID=Msa0898890-mRNA-1:cds;Parent=Msa0898890-mRNA-1 |
| chr6_1 | CDS | 93570499 | 93570768 | 93570499 | ID=Msa0898890-mRNA-1:cds;Parent=Msa0898890-mRNA-1 |
| chr6_1 | CDS | 93571145 | 93571281 | 93571145 | ID=Msa0898890-mRNA-1:cds;Parent=Msa0898890-mRNA-1 |
| chr6_1 | CDS | 93571382 | 93571528 | 93571382 | ID=Msa0898890-mRNA-1:cds;Parent=Msa0898890-mRNA-1 |
| chr6_1 | CDS | 93572537 | 93573223 | 93572537 | ID=Msa0898890-mRNA-1:cds;Parent=Msa0898890-mRNA-1 |
| chr6_1 | three_prime_UTR | 93573224 | 93573243 | 93573224 | ID=Msa0898890-mRNA-1:three_prime_utr;Parent=Msa0898890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
