Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048900 | XP_003621236.2 | 97.345 | 565 | 15 | 0 | 5 | 569 | 2 | 566 | 0.0 | 1135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048900 | sp|Q9LQL2|PTR14_ARATH | 70.351 | 570 | 159 | 5 | 6 | 569 | 14 | 579 | 0.0 | 813 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048900 | Q2HUR9 | 97.345 | 565 | 15 | 0 | 5 | 569 | 2 | 566 | 0.0 | 1135 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045550 | Msa1048900 | 0.802674 | 5.014935e-49 | -8.615850e-47 |
| Msa0071250 | Msa1048900 | 0.824921 | 6.211646e-54 | -8.615850e-47 |
| Msa0106620 | Msa1048900 | 0.812958 | 3.261671e-51 | -8.615850e-47 |
| Msa0106710 | Msa1048900 | 0.805981 | 1.026738e-49 | -8.615850e-47 |
| Msa0672550 | Msa1048900 | 0.808363 | 3.212557e-50 | -8.615850e-47 |
| Msa0705990 | Msa1048900 | 0.827795 | 1.283992e-54 | -8.615850e-47 |
| Msa0709120 | Msa1048900 | 0.806848 | 6.737941e-50 | -8.615850e-47 |
| Msa0709160 | Msa1048900 | 0.803292 | 3.737188e-49 | -8.615850e-47 |
| Msa0721280 | Msa1048900 | 0.804402 | 2.197931e-49 | -8.615850e-47 |
| Msa0763890 | Msa1048900 | 0.812732 | 3.655584e-51 | -8.615850e-47 |
| Msa0763920 | Msa1048900 | 0.818515 | 1.883316e-52 | -8.615850e-47 |
| Msa0823540 | Msa1048900 | 0.804937 | 1.699302e-49 | -8.615850e-47 |
| Msa0139670 | Msa1048900 | 0.804837 | 1.783571e-49 | -8.615850e-47 |
| Msa0144530 | Msa1048900 | 0.805102 | 1.569421e-49 | -8.615850e-47 |
| Msa0197610 | Msa1048900 | 0.805757 | 1.144360e-49 | -8.615850e-47 |
| Msa0401560 | Msa1048900 | 0.817066 | 3.999161e-52 | -8.615850e-47 |
| Msa0403490 | Msa1048900 | 0.813454 | 2.539211e-51 | -8.615850e-47 |
| Msa0427580 | Msa1048900 | 0.811642 | 6.321855e-51 | -8.615850e-47 |
| Msa0992580 | Msa1048900 | 0.816853 | 4.462861e-52 | -8.615850e-47 |
| Msa0992600 | Msa1048900 | 0.811494 | 6.806000e-51 | -8.615850e-47 |
| Msa1007090 | Msa1048900 | 0.909796 | 3.832699e-82 | -8.615850e-47 |
| Msa1024680 | Msa1048900 | 0.834552 | 2.806254e-56 | -8.615850e-47 |
| Msa1029620 | Msa1048900 | 0.801430 | 9.037692e-49 | -8.615850e-47 |
| Msa1048900 | Msa1063420 | 0.835106 | 2.035777e-56 | -8.615850e-47 |
| Msa1048900 | Msa1068480 | 0.813875 | 2.051232e-51 | -8.615850e-47 |
| Msa1048900 | Msa1100630 | 0.875370 | 3.249623e-68 | -8.615850e-47 |
| Msa1048900 | Msa1108710 | 0.816063 | 6.706506e-52 | -8.615850e-47 |
| Msa1048900 | Msa1136200 | 0.908965 | 9.596565e-82 | -8.615850e-47 |
| Msa1048900 | Msa1143020 | 0.800986 | 1.114335e-48 | -8.615850e-47 |
| Msa1048900 | Msa1209190 | 0.802812 | 4.697432e-49 | -8.615850e-47 |
| Msa1048900 | Msa1234620 | 0.801330 | 9.476440e-49 | -8.615850e-47 |
| Msa1048900 | Msa1270660 | 0.800786 | 1.223744e-48 | -8.615850e-47 |
| Msa1048900 | Msa1270730 | 0.810367 | 1.193764e-50 | -8.615850e-47 |
| Msa1048900 | Msa1332050 | 0.812206 | 4.764703e-51 | -8.615850e-47 |
| Msa1048900 | Msa1335230 | 0.802228 | 6.197232e-49 | -8.615850e-47 |
| Msa1048900 | Msa1357890 | 0.805937 | 1.048792e-49 | -8.615850e-47 |
| Msa1048900 | Msa1368360 | 0.823480 | 1.353847e-53 | -8.615850e-47 |
| Msa1048900 | Msa1370590 | 0.806839 | 6.770253e-50 | -8.615850e-47 |
| Msa1048900 | Msa1384100 | 0.810848 | 9.400282e-51 | -8.615850e-47 |
| Msa1048900 | Msa1393840 | -0.807961 | 3.913433e-50 | -8.615850e-47 |
| Msa1048900 | Msa1398090 | 0.802118 | 6.528673e-49 | -8.615850e-47 |
| Msa1048900 | Msa1401460 | 0.804350 | 2.253550e-49 | -8.615850e-47 |
| Msa1048900 | Msa1437330 | 0.825552 | 4.405410e-54 | -8.615850e-47 |
| Msa1048900 | Msa1444120 | 0.806682 | 7.306231e-50 | -8.615850e-47 |
| Msa0240270 | Msa1048900 | 0.809938 | 1.477083e-50 | -8.615850e-47 |
| Msa0241140 | Msa1048900 | 0.806872 | 6.661013e-50 | -8.615850e-47 |
| Msa0249310 | Msa1048900 | 0.805115 | 1.560257e-49 | -8.615850e-47 |
| Msa0287790 | Msa1048900 | 0.810529 | 1.101902e-50 | -8.615850e-47 |
| Msa0288120 | Msa1048900 | 0.808540 | 2.945838e-50 | -8.615850e-47 |
| Msa0308440 | Msa1048900 | 0.825303 | 5.044120e-54 | -8.615850e-47 |
| Msa0321690 | Msa1048900 | 0.807099 | 5.962609e-50 | -8.615850e-47 |
| Msa0482940 | Msa1048900 | 0.812050 | 5.151828e-51 | -8.615850e-47 |
| Msa0518170 | Msa1048900 | 0.804666 | 1.936444e-49 | -8.615850e-47 |
| Msa0526020 | Msa1048900 | 0.812289 | 4.570136e-51 | -8.615850e-47 |
| Msa0569780 | Msa1048900 | 0.800626 | 1.319245e-48 | -8.615850e-47 |
| Msa0594050 | Msa1048900 | 0.805235 | 1.472165e-49 | -8.615850e-47 |
| Msa0844110 | Msa1048900 | 0.822104 | 2.831203e-53 | -8.615850e-47 |
| Msa0921420 | Msa1048900 | 0.802191 | 6.306202e-49 | -8.615850e-47 |
| Msa0933760 | Msa1048900 | 0.801898 | 7.245995e-49 | -8.615850e-47 |
| Msa0934140 | Msa1048900 | 0.805734 | 1.157170e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048900 | MtrunA17_Chr7g0217461 | 97.345 | 565 | 15 | 0 | 5 | 569 | 2 | 566 | 0.0 | 1135 |
| Msa1048900 | MtrunA17_Chr4g0054891 | 72.504 | 571 | 145 | 4 | 2 | 569 | 85 | 646 | 0.0 | 836 |
| Msa1048900 | MtrunA17_Chr5g0400371 | 69.527 | 571 | 167 | 4 | 2 | 569 | 87 | 653 | 0.0 | 800 |
| Msa1048900 | MtrunA17_Chr1g0213711 | 60.070 | 571 | 207 | 8 | 1 | 569 | 1 | 552 | 0.0 | 671 |
| Msa1048900 | MtrunA17_Chr7g0214461 | 60.073 | 551 | 205 | 5 | 21 | 569 | 72 | 609 | 0.0 | 659 |
| Msa1048900 | MtrunA17_Chr7g0218851 | 60.759 | 553 | 200 | 6 | 21 | 569 | 40 | 579 | 0.0 | 645 |
| Msa1048900 | MtrunA17_Chr4g0011471 | 53.383 | 532 | 238 | 4 | 41 | 569 | 30 | 554 | 0.0 | 547 |
| Msa1048900 | MtrunA17_Chr4g0011041 | 46.678 | 572 | 293 | 5 | 4 | 569 | 11 | 576 | 1.77e-178 | 516 |
| Msa1048900 | MtrunA17_Chr8g0375311 | 43.993 | 566 | 308 | 5 | 6 | 569 | 19 | 577 | 5.34e-170 | 494 |
| Msa1048900 | MtrunA17_Chr7g0241741 | 46.549 | 565 | 288 | 6 | 8 | 569 | 3 | 556 | 1.23e-168 | 490 |
| Msa1048900 | MtrunA17_Chr8g0375291 | 44.425 | 565 | 305 | 5 | 6 | 568 | 19 | 576 | 3.67e-166 | 485 |
| Msa1048900 | MtrunA17_Chr4g0005901 | 45.375 | 573 | 297 | 9 | 1 | 569 | 6 | 566 | 2.77e-165 | 482 |
| Msa1048900 | MtrunA17_Chr3g0104011 | 44.974 | 567 | 298 | 10 | 7 | 569 | 2 | 558 | 1.87e-164 | 480 |
| Msa1048900 | MtrunA17_Chr8g0375351 | 42.934 | 559 | 310 | 5 | 13 | 569 | 26 | 577 | 1.17e-157 | 463 |
| Msa1048900 | MtrunA17_Chr8g0375341 | 41.860 | 559 | 316 | 5 | 13 | 569 | 26 | 577 | 4.99e-155 | 456 |
| Msa1048900 | MtrunA17_Chr8g0375321 | 40.455 | 571 | 330 | 7 | 1 | 569 | 12 | 574 | 4.98e-151 | 446 |
| Msa1048900 | MtrunA17_Chr8g0375331 | 40.429 | 559 | 324 | 5 | 13 | 569 | 10 | 561 | 5.56e-147 | 435 |
| Msa1048900 | MtrunA17_Chr8g0375361 | 43.433 | 571 | 306 | 7 | 5 | 569 | 17 | 576 | 2.89e-146 | 434 |
| Msa1048900 | MtrunA17_Chr3g0142101 | 39.543 | 569 | 318 | 8 | 6 | 568 | 12 | 560 | 3.52e-143 | 426 |
| Msa1048900 | MtrunA17_Chr7g0261811 | 37.876 | 565 | 334 | 6 | 10 | 569 | 10 | 562 | 1.11e-139 | 417 |
| Msa1048900 | MtrunA17_Chr7g0261771 | 37.522 | 573 | 341 | 6 | 2 | 569 | 6 | 566 | 1.01e-138 | 415 |
| Msa1048900 | MtrunA17_Chr3g0142091 | 38.596 | 570 | 328 | 6 | 3 | 568 | 2 | 553 | 1.63e-138 | 414 |
| Msa1048900 | MtrunA17_Chr7g0261881 | 36.991 | 565 | 339 | 6 | 10 | 569 | 10 | 562 | 7.33e-138 | 412 |
| Msa1048900 | MtrunA17_Chr1g0187241 | 37.857 | 560 | 331 | 6 | 10 | 564 | 9 | 556 | 2.88e-135 | 406 |
| Msa1048900 | MtrunA17_Chr1g0166791 | 37.500 | 560 | 337 | 5 | 13 | 569 | 10 | 559 | 4.86e-134 | 403 |
| Msa1048900 | MtrunA17_Chr7g0261791 | 38.163 | 566 | 332 | 6 | 10 | 569 | 12 | 565 | 4.68e-133 | 400 |
| Msa1048900 | MtrunA17_Chr5g0399061 | 39.286 | 560 | 320 | 7 | 19 | 569 | 19 | 567 | 1.63e-128 | 388 |
| Msa1048900 | MtrunA17_Chr5g0399071 | 38.938 | 565 | 327 | 5 | 13 | 569 | 11 | 565 | 9.65e-128 | 386 |
| Msa1048900 | MtrunA17_Chr3g0112671 | 36.767 | 563 | 334 | 6 | 8 | 569 | 14 | 555 | 1.06e-125 | 381 |
| Msa1048900 | MtrunA17_Chr7g0240381 | 36.691 | 556 | 332 | 7 | 15 | 569 | 17 | 553 | 7.25e-124 | 376 |
| Msa1048900 | MtrunA17_Chr4g0056431 | 38.693 | 566 | 330 | 9 | 13 | 569 | 11 | 568 | 8.64e-124 | 376 |
| Msa1048900 | MtrunA17_Chr1g0166741 | 35.963 | 545 | 329 | 5 | 13 | 554 | 13 | 540 | 1.15e-123 | 376 |
| Msa1048900 | MtrunA17_Chr1g0166711 | 35.893 | 560 | 345 | 5 | 13 | 569 | 11 | 559 | 3.38e-122 | 372 |
| Msa1048900 | MtrunA17_Chr7g0261851 | 37.367 | 562 | 335 | 6 | 13 | 569 | 14 | 563 | 2.03e-121 | 370 |
| Msa1048900 | MtrunA17_Chr4g0008651 | 35.971 | 556 | 342 | 6 | 15 | 569 | 22 | 564 | 3.92e-121 | 369 |
| Msa1048900 | MtrunA17_Chr1g0166771 | 37.305 | 512 | 301 | 5 | 48 | 556 | 12 | 506 | 2.47e-119 | 363 |
| Msa1048900 | MtrunA17_Chr3g0114501 | 36.412 | 563 | 336 | 8 | 10 | 565 | 5 | 552 | 1.40e-117 | 360 |
| Msa1048900 | MtrunA17_Chr3g0077151 | 37.833 | 563 | 306 | 10 | 13 | 569 | 14 | 538 | 1.42e-117 | 359 |
| Msa1048900 | MtrunA17_Chr4g0014791 | 36.842 | 570 | 327 | 10 | 3 | 569 | 5 | 544 | 4.49e-115 | 353 |
| Msa1048900 | MtrunA17_Chr4g0014841 | 36.842 | 570 | 327 | 11 | 3 | 569 | 5 | 544 | 2.06e-114 | 351 |
| Msa1048900 | MtrunA17_Chr5g0422881 | 36.315 | 559 | 338 | 10 | 18 | 569 | 12 | 559 | 4.93e-114 | 351 |
| Msa1048900 | MtrunA17_Chr5g0439381 | 37.324 | 568 | 327 | 7 | 6 | 568 | 7 | 550 | 7.57e-114 | 350 |
| Msa1048900 | MtrunA17_Chr4g0014801 | 36.760 | 574 | 324 | 12 | 3 | 569 | 5 | 546 | 1.27e-113 | 349 |
| Msa1048900 | MtrunA17_Chr3g0112611 | 33.743 | 569 | 365 | 6 | 2 | 569 | 7 | 564 | 2.00e-113 | 350 |
| Msa1048900 | MtrunA17_Chr4g0014871 | 35.879 | 563 | 323 | 11 | 14 | 569 | 17 | 548 | 2.92e-113 | 348 |
| Msa1048900 | MtrunA17_Chr4g0063591 | 37.653 | 571 | 335 | 9 | 1 | 568 | 1 | 553 | 8.18e-112 | 345 |
| Msa1048900 | MtrunA17_Chr4g0014781 | 36.667 | 570 | 330 | 13 | 3 | 569 | 5 | 546 | 1.51e-110 | 341 |
| Msa1048900 | MtrunA17_Chr7g0214731 | 35.818 | 550 | 339 | 6 | 29 | 569 | 63 | 607 | 3.45e-104 | 327 |
| Msa1048900 | MtrunA17_Chr8g0353031 | 35.805 | 553 | 316 | 7 | 29 | 569 | 20 | 545 | 8.79e-104 | 324 |
| Msa1048900 | MtrunA17_Chr2g0284701 | 33.857 | 573 | 367 | 9 | 8 | 569 | 12 | 583 | 3.62e-103 | 323 |
| Msa1048900 | MtrunA17_Chr7g0261661 | 36.324 | 457 | 274 | 6 | 118 | 569 | 4 | 448 | 1.83e-102 | 318 |
| Msa1048900 | MtrunA17_Chr7g0255621 | 33.577 | 548 | 350 | 9 | 27 | 568 | 20 | 559 | 4.01e-101 | 318 |
| Msa1048900 | MtrunA17_Chr2g0276751 | 34.775 | 555 | 334 | 7 | 14 | 565 | 25 | 554 | 1.49e-100 | 316 |
| Msa1048900 | MtrunA17_Chr7g0261751 | 33.943 | 492 | 273 | 6 | 2 | 452 | 6 | 486 | 4.80e-98 | 308 |
| Msa1048900 | MtrunA17_Chr5g0415791 | 32.616 | 558 | 359 | 8 | 19 | 569 | 25 | 572 | 3.87e-97 | 308 |
| Msa1048900 | MtrunA17_Chr7g0255601 | 32.929 | 577 | 365 | 11 | 1 | 568 | 3 | 566 | 2.22e-96 | 306 |
| Msa1048900 | MtrunA17_Chr1g0193391 | 32.176 | 547 | 347 | 7 | 15 | 557 | 3 | 529 | 4.76e-96 | 305 |
| Msa1048900 | MtrunA17_Chr7g0255611 | 32.911 | 553 | 355 | 10 | 18 | 564 | 22 | 564 | 7.28e-96 | 304 |
| Msa1048900 | MtrunA17_Chr4g0059981 | 33.883 | 546 | 346 | 7 | 33 | 569 | 37 | 576 | 9.36e-96 | 304 |
| Msa1048900 | MtrunA17_Chr4g0059971 | 32.014 | 556 | 369 | 6 | 19 | 569 | 28 | 579 | 1.34e-95 | 303 |
| Msa1048900 | MtrunA17_Chr4g0069581 | 35.606 | 528 | 318 | 8 | 45 | 569 | 4 | 512 | 2.56e-95 | 301 |
| Msa1048900 | MtrunA17_Chr4g0059991 | 32.472 | 542 | 360 | 4 | 33 | 569 | 28 | 568 | 4.07e-95 | 302 |
| Msa1048900 | MtrunA17_Chr8g0362781 | 30.700 | 557 | 370 | 6 | 23 | 569 | 26 | 576 | 5.41e-95 | 301 |
| Msa1048900 | MtrunA17_Chr5g0415961 | 32.931 | 580 | 349 | 10 | 8 | 565 | 2 | 563 | 3.99e-93 | 296 |
| Msa1048900 | MtrunA17_Chr1g0166731 | 36.166 | 459 | 279 | 5 | 114 | 569 | 9 | 456 | 4.21e-93 | 293 |
| Msa1048900 | MtrunA17_Chr4g0014861 | 38.876 | 427 | 242 | 9 | 146 | 569 | 13 | 423 | 6.28e-93 | 291 |
| Msa1048900 | MtrunA17_Chr8g0379971 | 33.219 | 581 | 362 | 8 | 14 | 569 | 7 | 586 | 7.05e-93 | 296 |
| Msa1048900 | MtrunA17_Chr8g0362711 | 33.333 | 567 | 344 | 8 | 16 | 565 | 13 | 562 | 1.69e-91 | 292 |
| Msa1048900 | MtrunA17_Chr7g0271221 | 32.110 | 545 | 346 | 8 | 27 | 568 | 17 | 540 | 2.91e-91 | 292 |
| Msa1048900 | MtrunA17_Chr3g0082631 | 36.552 | 435 | 252 | 6 | 149 | 569 | 30 | 454 | 1.86e-89 | 284 |
| Msa1048900 | MtrunA17_Chr3g0133341 | 32.310 | 554 | 348 | 7 | 23 | 568 | 10 | 544 | 3.85e-89 | 286 |
| Msa1048900 | MtrunA17_Chr8g0390331 | 31.676 | 543 | 359 | 8 | 26 | 565 | 14 | 547 | 3.00e-82 | 268 |
| Msa1048900 | MtrunA17_Chr7g0261731 | 37.243 | 341 | 201 | 3 | 13 | 349 | 17 | 348 | 1.20e-81 | 259 |
| Msa1048900 | MtrunA17_Chr1g0157601 | 31.227 | 538 | 350 | 9 | 39 | 569 | 27 | 551 | 1.30e-80 | 263 |
| Msa1048900 | MtrunA17_Chr8g0379991 | 34.103 | 563 | 329 | 11 | 45 | 569 | 1 | 559 | 2.13e-79 | 260 |
| Msa1048900 | MtrunA17_Chr6g0451841 | 33.394 | 554 | 311 | 12 | 37 | 569 | 15 | 531 | 2.80e-77 | 254 |
| Msa1048900 | MtrunA17_Chr8g0362801 | 32.251 | 462 | 300 | 7 | 115 | 569 | 1 | 456 | 3.57e-77 | 252 |
| Msa1048900 | MtrunA17_Chr1g0157611 | 30.729 | 576 | 368 | 10 | 1 | 569 | 1 | 552 | 2.24e-75 | 249 |
| Msa1048900 | MtrunA17_Chr4g0060001 | 30.261 | 575 | 374 | 13 | 2 | 564 | 3 | 562 | 2.90e-73 | 245 |
| Msa1048900 | MtrunA17_Chr7g0240271 | 29.061 | 554 | 374 | 7 | 25 | 569 | 22 | 565 | 3.04e-73 | 244 |
| Msa1048900 | MtrunA17_Chr1g0157621 | 30.624 | 529 | 346 | 11 | 48 | 569 | 1 | 515 | 4.01e-72 | 241 |
| Msa1048900 | MtrunA17_Chr2g0331521 | 30.142 | 564 | 380 | 11 | 9 | 565 | 1 | 557 | 4.13e-72 | 241 |
| Msa1048900 | MtrunA17_Chr3g0142111 | 38.961 | 308 | 181 | 4 | 3 | 305 | 20 | 325 | 5.71e-72 | 234 |
| Msa1048900 | MtrunA17_Chr4g0003761 | 30.387 | 543 | 341 | 12 | 39 | 565 | 42 | 563 | 4.85e-71 | 239 |
| Msa1048900 | MtrunA17_Chr2g0331511 | 28.850 | 565 | 389 | 10 | 5 | 565 | 1 | 556 | 6.80e-70 | 236 |
| Msa1048900 | MtrunA17_Chr2g0331481 | 29.553 | 582 | 367 | 13 | 5 | 565 | 1 | 560 | 2.11e-69 | 235 |
| Msa1048900 | MtrunA17_Chr2g0331471 | 29.352 | 586 | 368 | 14 | 2 | 565 | 62 | 623 | 4.68e-69 | 236 |
| Msa1048900 | MtrunA17_Chr5g0415841 | 29.712 | 451 | 298 | 7 | 115 | 556 | 1 | 441 | 1.28e-68 | 229 |
| Msa1048900 | MtrunA17_Chr1g0177591 | 29.545 | 572 | 361 | 16 | 2 | 565 | 21 | 558 | 9.61e-67 | 227 |
| Msa1048900 | MtrunA17_Chr1g0147631 | 28.624 | 545 | 376 | 8 | 27 | 567 | 25 | 560 | 5.52e-66 | 225 |
| Msa1048900 | MtrunA17_Chr2g0325951 | 29.701 | 569 | 352 | 13 | 14 | 565 | 1 | 538 | 8.61e-66 | 224 |
| Msa1048900 | MtrunA17_Chr7g0240281 | 29.242 | 554 | 375 | 7 | 25 | 569 | 22 | 567 | 4.52e-64 | 220 |
| Msa1048900 | MtrunA17_Chr2g0325961 | 29.825 | 570 | 351 | 11 | 14 | 565 | 1 | 539 | 6.29e-64 | 219 |
| Msa1048900 | MtrunA17_Chr7g0235521 | 30.310 | 452 | 296 | 7 | 127 | 569 | 13 | 454 | 2.24e-63 | 215 |
| Msa1048900 | MtrunA17_Chr7g0240131 | 30.310 | 452 | 296 | 7 | 127 | 569 | 13 | 454 | 6.83e-63 | 214 |
| Msa1048900 | MtrunA17_Chr7g0240211 | 30.088 | 452 | 297 | 7 | 127 | 569 | 13 | 454 | 2.99e-62 | 212 |
| Msa1048900 | MtrunA17_Chr7g0240181 | 30.088 | 452 | 297 | 7 | 127 | 569 | 13 | 454 | 3.02e-62 | 212 |
| Msa1048900 | MtrunA17_Chr2g0326211 | 29.250 | 547 | 350 | 9 | 28 | 565 | 20 | 538 | 3.45e-61 | 211 |
| Msa1048900 | MtrunA17_Chr3g0112631 | 38.321 | 274 | 157 | 5 | 299 | 569 | 3 | 267 | 4.06e-59 | 198 |
| Msa1048900 | MtrunA17_Chr2g0331461 | 28.819 | 576 | 379 | 14 | 5 | 565 | 1 | 560 | 1.61e-57 | 203 |
| Msa1048900 | MtrunA17_Chr3g0142121 | 39.259 | 270 | 145 | 5 | 300 | 568 | 11 | 262 | 9.12e-57 | 192 |
| Msa1048900 | MtrunA17_Chr1g0177611 | 30.698 | 430 | 275 | 9 | 141 | 565 | 18 | 429 | 1.26e-56 | 196 |
| Msa1048900 | MtrunA17_Chr7g0240151 | 29.646 | 452 | 281 | 9 | 127 | 569 | 13 | 436 | 3.14e-56 | 196 |
| Msa1048900 | MtrunA17_Chr1g0177631 | 30.374 | 428 | 275 | 9 | 143 | 565 | 20 | 429 | 1.00e-53 | 189 |
| Msa1048900 | MtrunA17_Chr7g0234151 | 32.944 | 428 | 249 | 11 | 144 | 569 | 25 | 416 | 3.71e-50 | 178 |
| Msa1048900 | MtrunA17_Chr7g0234381 | 32.258 | 434 | 256 | 11 | 138 | 569 | 19 | 416 | 9.86e-48 | 172 |
| Msa1048900 | MtrunA17_Chr7g0234181 | 31.106 | 434 | 261 | 10 | 138 | 569 | 14 | 411 | 9.66e-47 | 169 |
| Msa1048900 | MtrunA17_Chr4g0060071 | 34.307 | 274 | 161 | 7 | 295 | 565 | 32 | 289 | 1.01e-43 | 157 |
| Msa1048900 | MtrunA17_Chr7g0261721 | 38.265 | 196 | 118 | 2 | 374 | 569 | 4 | 196 | 1.40e-38 | 141 |
| Msa1048900 | MtrunA17_Chr3g0112651 | 33.690 | 187 | 120 | 2 | 114 | 300 | 21 | 203 | 1.03e-29 | 116 |
| Msa1048900 | MtrunA17_Chr7g0261831 | 36.025 | 161 | 90 | 4 | 258 | 414 | 3 | 154 | 1.12e-25 | 105 |
| Msa1048900 | MtrunA17_Chr4g0060061 | 37.190 | 121 | 76 | 0 | 133 | 253 | 2 | 122 | 2.56e-21 | 90.1 |
| Msa1048900 | MtrunA17_Chr1g0147591 | 25.758 | 198 | 140 | 2 | 150 | 344 | 3 | 196 | 6.88e-21 | 90.9 |
| Msa1048900 | MtrunA17_Chr7g0261671 | 36.364 | 110 | 70 | 0 | 2 | 111 | 7 | 116 | 4.00e-19 | 83.6 |
| Msa1048900 | MtrunA17_Chr4g0014851 | 38.000 | 100 | 62 | 0 | 14 | 113 | 17 | 116 | 2.04e-18 | 82.8 |
| Msa1048900 | MtrunA17_Chr1g0166721 | 34.653 | 101 | 66 | 0 | 13 | 113 | 11 | 111 | 7.42e-18 | 80.9 |
| Msa1048900 | MtrunA17_Chr3g0112661 | 40.230 | 87 | 52 | 0 | 15 | 101 | 19 | 105 | 9.59e-18 | 80.1 |
| Msa1048900 | MtrunA17_Chr2g0326221 | 27.586 | 232 | 135 | 5 | 335 | 565 | 15 | 214 | 7.89e-16 | 77.0 |
| Msa1048900 | MtrunA17_Chr3g0082621 | 43.077 | 65 | 37 | 0 | 49 | 113 | 8 | 72 | 4.37e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048900 | AT1G32450.1 | 70.351 | 570 | 159 | 5 | 6 | 569 | 14 | 579 | 0.0 | 813 |
| Msa1048900 | AT4G21680.1 | 70.157 | 573 | 162 | 6 | 1 | 569 | 1 | 568 | 0.0 | 788 |
| Msa1048900 | AT5G19640.1 | 62.546 | 542 | 179 | 5 | 30 | 569 | 60 | 579 | 0.0 | 667 |
| Msa1048900 | AT3G54140.1 | 44.700 | 566 | 301 | 7 | 7 | 569 | 2 | 558 | 3.11e-172 | 500 |
| Msa1048900 | AT3G54140.2 | 44.700 | 566 | 301 | 7 | 7 | 569 | 2 | 558 | 3.11e-172 | 500 |
| Msa1048900 | AT2G02040.1 | 42.655 | 565 | 315 | 5 | 2 | 564 | 14 | 571 | 4.42e-163 | 477 |
| Msa1048900 | AT5G01180.2 | 42.782 | 568 | 312 | 7 | 5 | 569 | 1 | 558 | 2.07e-159 | 467 |
| Msa1048900 | AT5G01180.3 | 42.782 | 568 | 312 | 7 | 5 | 569 | 1 | 558 | 2.07e-159 | 467 |
| Msa1048900 | AT5G01180.1 | 42.782 | 568 | 312 | 7 | 5 | 569 | 1 | 558 | 2.07e-159 | 467 |
| Msa1048900 | AT1G62200.1 | 41.828 | 569 | 312 | 6 | 2 | 564 | 22 | 577 | 1.84e-156 | 461 |
| Msa1048900 | AT1G62200.2 | 39.967 | 598 | 311 | 7 | 2 | 564 | 22 | 606 | 2.42e-150 | 446 |
| Msa1048900 | AT1G62200.3 | 39.967 | 598 | 311 | 7 | 2 | 564 | 36 | 620 | 3.72e-150 | 446 |
| Msa1048900 | AT2G02020.1 | 39.753 | 566 | 293 | 6 | 2 | 565 | 15 | 534 | 5.06e-144 | 427 |
| Msa1048900 | AT2G02020.2 | 37.102 | 566 | 287 | 9 | 2 | 565 | 15 | 513 | 7.17e-124 | 375 |
| Msa1048900 | AT2G26690.1 | 39.107 | 560 | 322 | 8 | 13 | 568 | 8 | 552 | 9.64e-123 | 374 |
| Msa1048900 | AT2G37900.1 | 35.432 | 556 | 342 | 6 | 14 | 569 | 23 | 561 | 1.85e-121 | 370 |
| Msa1048900 | AT5G46050.1 | 36.447 | 546 | 331 | 7 | 13 | 554 | 11 | 544 | 2.75e-120 | 367 |
| Msa1048900 | AT3G54450.1 | 36.396 | 555 | 317 | 10 | 26 | 569 | 8 | 537 | 2.78e-119 | 364 |
| Msa1048900 | AT3G53960.1 | 35.009 | 557 | 349 | 5 | 14 | 568 | 22 | 567 | 5.08e-118 | 362 |
| Msa1048900 | AT5G46040.1 | 35.531 | 546 | 336 | 7 | 13 | 554 | 11 | 544 | 8.94e-117 | 358 |
| Msa1048900 | AT1G12110.1 | 37.097 | 558 | 334 | 6 | 19 | 569 | 17 | 564 | 2.05e-115 | 355 |
| Msa1048900 | AT2G26690.2 | 39.619 | 525 | 298 | 8 | 48 | 568 | 10 | 519 | 2.87e-115 | 353 |
| Msa1048900 | AT2G26690.3 | 39.731 | 521 | 295 | 8 | 52 | 568 | 2 | 507 | 6.78e-115 | 352 |
| Msa1048900 | AT3G21670.1 | 36.814 | 565 | 322 | 10 | 15 | 568 | 12 | 552 | 2.15e-110 | 342 |
| Msa1048900 | AT2G40460.1 | 35.512 | 566 | 337 | 10 | 10 | 568 | 5 | 549 | 5.45e-109 | 338 |
| Msa1048900 | AT1G22540.1 | 37.410 | 556 | 319 | 9 | 17 | 569 | 18 | 547 | 3.84e-108 | 335 |
| Msa1048900 | AT1G68570.1 | 36.786 | 560 | 330 | 10 | 21 | 569 | 17 | 563 | 7.55e-108 | 335 |
| Msa1048900 | AT5G13400.1 | 35.907 | 557 | 342 | 8 | 18 | 565 | 52 | 602 | 1.55e-107 | 336 |
| Msa1048900 | AT1G68570.2 | 37.291 | 539 | 316 | 9 | 42 | 569 | 6 | 533 | 3.79e-107 | 333 |
| Msa1048900 | AT1G72140.1 | 34.342 | 562 | 324 | 9 | 17 | 569 | 22 | 547 | 6.13e-106 | 329 |
| Msa1048900 | AT2G37900.2 | 35.141 | 498 | 306 | 6 | 72 | 569 | 2 | 482 | 1.78e-105 | 326 |
| Msa1048900 | AT1G69870.1 | 34.070 | 543 | 348 | 6 | 26 | 564 | 48 | 584 | 8.98e-103 | 323 |
| Msa1048900 | AT1G59740.1 | 34.291 | 557 | 345 | 8 | 15 | 565 | 27 | 568 | 1.34e-101 | 319 |
| Msa1048900 | AT1G72130.1 | 37.477 | 555 | 299 | 12 | 21 | 569 | 16 | 528 | 1.84e-100 | 315 |
| Msa1048900 | AT1G22550.1 | 35.149 | 569 | 329 | 12 | 13 | 569 | 14 | 554 | 5.34e-98 | 309 |
| Msa1048900 | AT1G72125.1 | 35.663 | 558 | 331 | 11 | 17 | 569 | 17 | 551 | 8.21e-98 | 308 |
| Msa1048900 | AT1G72120.1 | 34.588 | 558 | 333 | 10 | 17 | 569 | 17 | 547 | 3.38e-96 | 304 |
| Msa1048900 | AT5G46050.2 | 36.937 | 444 | 264 | 7 | 115 | 554 | 1 | 432 | 5.08e-94 | 296 |
| Msa1048900 | AT1G22570.1 | 33.034 | 557 | 338 | 10 | 8 | 552 | 5 | 538 | 8.85e-94 | 298 |
| Msa1048900 | AT1G33440.1 | 35.599 | 559 | 331 | 9 | 15 | 565 | 24 | 561 | 3.44e-92 | 295 |
| Msa1048900 | AT1G18880.1 | 32.657 | 542 | 349 | 9 | 33 | 565 | 23 | 557 | 1.66e-90 | 290 |
| Msa1048900 | AT1G22570.2 | 33.398 | 512 | 310 | 9 | 49 | 552 | 13 | 501 | 4.75e-88 | 282 |
| Msa1048900 | AT1G69850.1 | 32.168 | 572 | 369 | 7 | 8 | 565 | 4 | 570 | 9.06e-88 | 283 |
| Msa1048900 | AT5G14940.1 | 32.270 | 564 | 329 | 11 | 27 | 569 | 5 | 536 | 1.00e-86 | 279 |
| Msa1048900 | AT5G62680.1 | 31.123 | 543 | 366 | 6 | 33 | 569 | 47 | 587 | 1.74e-86 | 280 |
| Msa1048900 | AT1G27080.1 | 33.026 | 542 | 344 | 8 | 27 | 564 | 12 | 538 | 3.16e-85 | 276 |
| Msa1048900 | AT1G27040.1 | 31.866 | 568 | 372 | 5 | 4 | 569 | 2 | 556 | 8.89e-84 | 272 |
| Msa1048900 | AT1G27040.2 | 32.028 | 562 | 367 | 5 | 10 | 569 | 4 | 552 | 1.07e-83 | 272 |
| Msa1048900 | AT5G62730.1 | 29.412 | 578 | 362 | 8 | 3 | 565 | 30 | 576 | 3.18e-81 | 266 |
| Msa1048900 | AT3G47960.1 | 30.203 | 543 | 369 | 7 | 33 | 569 | 65 | 603 | 4.06e-81 | 267 |
| Msa1048900 | AT1G72130.2 | 37.130 | 439 | 234 | 9 | 141 | 569 | 4 | 410 | 6.60e-80 | 258 |
| Msa1048900 | AT1G72130.3 | 37.130 | 439 | 234 | 9 | 141 | 569 | 4 | 410 | 6.60e-80 | 258 |
| Msa1048900 | AT1G27040.3 | 32.448 | 527 | 341 | 5 | 45 | 569 | 11 | 524 | 1.45e-79 | 260 |
| Msa1048900 | AT1G27080.2 | 32.877 | 511 | 324 | 8 | 58 | 564 | 1 | 496 | 2.93e-79 | 259 |
| Msa1048900 | AT3G01350.1 | 30.935 | 556 | 335 | 8 | 38 | 569 | 16 | 546 | 3.95e-76 | 252 |
| Msa1048900 | AT5G62730.2 | 29.982 | 547 | 335 | 10 | 35 | 565 | 3 | 517 | 1.79e-75 | 249 |
| Msa1048900 | AT3G16180.1 | 29.295 | 553 | 372 | 11 | 23 | 565 | 16 | 559 | 2.90e-74 | 248 |
| Msa1048900 | AT1G52190.1 | 28.439 | 538 | 366 | 9 | 39 | 565 | 31 | 560 | 5.77e-74 | 247 |
| Msa1048900 | AT3G25260.1 | 28.442 | 552 | 345 | 9 | 19 | 569 | 11 | 513 | 1.80e-70 | 236 |
| Msa1048900 | AT3G45710.1 | 27.664 | 535 | 361 | 7 | 20 | 553 | 14 | 523 | 3.99e-67 | 228 |
| Msa1048900 | AT3G45650.1 | 28.154 | 547 | 357 | 10 | 13 | 553 | 6 | 522 | 4.37e-67 | 228 |
| Msa1048900 | AT1G69860.1 | 29.390 | 541 | 360 | 6 | 33 | 569 | 22 | 544 | 3.78e-66 | 225 |
| Msa1048900 | AT3G45680.1 | 27.860 | 542 | 360 | 9 | 15 | 553 | 8 | 521 | 6.29e-66 | 224 |
| Msa1048900 | AT5G28470.2 | 27.190 | 548 | 381 | 8 | 23 | 564 | 11 | 546 | 2.14e-65 | 223 |
| Msa1048900 | AT3G45720.1 | 27.723 | 505 | 337 | 9 | 51 | 553 | 41 | 519 | 4.89e-65 | 222 |
| Msa1048900 | AT3G45660.1 | 28.460 | 513 | 331 | 10 | 47 | 553 | 39 | 521 | 1.99e-62 | 215 |
| Msa1048900 | AT3G45660.3 | 28.460 | 513 | 331 | 10 | 47 | 553 | 39 | 521 | 1.99e-62 | 215 |
| Msa1048900 | AT5G28470.1 | 27.007 | 548 | 380 | 9 | 23 | 564 | 11 | 544 | 2.40e-62 | 215 |
| Msa1048900 | AT3G45660.2 | 28.460 | 513 | 331 | 10 | 47 | 553 | 60 | 542 | 4.01e-62 | 215 |
| Msa1048900 | AT3G45650.2 | 27.051 | 573 | 356 | 11 | 13 | 553 | 6 | 548 | 4.38e-62 | 215 |
| Msa1048900 | AT3G45700.1 | 26.103 | 544 | 367 | 10 | 19 | 560 | 8 | 518 | 4.79e-59 | 206 |
| Msa1048900 | AT3G25280.1 | 26.897 | 580 | 352 | 17 | 1 | 569 | 1 | 519 | 1.49e-55 | 196 |
| Msa1048900 | AT3G45690.1 | 25.882 | 510 | 310 | 11 | 47 | 553 | 36 | 480 | 8.31e-50 | 180 |
| Msa1048900 | AT2G38100.2 | 24.272 | 515 | 344 | 11 | 57 | 564 | 2 | 477 | 4.97e-33 | 132 |
| Msa1048900 | AT2G38100.1 | 24.381 | 525 | 350 | 12 | 47 | 564 | 9 | 493 | 6.82e-33 | 132 |
| Msa1048900 | AT2G38100.3 | 24.381 | 525 | 350 | 12 | 47 | 564 | 15 | 499 | 1.05e-32 | 132 |
| Msa1048900 | AT5G11570.1 | 28.571 | 259 | 170 | 4 | 313 | 569 | 229 | 474 | 1.64e-26 | 113 |
| Msa1048900 | AT5G11570.1 | 31.944 | 216 | 140 | 4 | 39 | 251 | 23 | 234 | 3.34e-24 | 106 |
Find 107 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATCTGCTTCAAATCTTT+TGG | 0.208371 | 7_2:+11489332 | None:intergenic |
| GTTTACATCTTCTCTCTTCT+TGG | 0.208407 | 7_2:-11491001 | Msa1048900:CDS |
| CGAGTTCATTGTCGATATTT+TGG | 0.217698 | 7_2:-11488881 | Msa1048900:CDS |
| TATTAAGATTACTACCAATT+TGG | 0.237474 | 7_2:-11489247 | Msa1048900:CDS |
| CTTTCCTTAGTGACTCTTAT+TGG | 0.253324 | 7_2:-11490976 | Msa1048900:CDS |
| CACAAAGATGACTTGGAAAA+TGG | 0.258789 | 7_2:+11490934 | None:intergenic |
| TTTCCTTAGTGACTCTTATT+GGG | 0.266964 | 7_2:-11490975 | Msa1048900:CDS |
| TGTACCACACACAAGGATTT+AGG | 0.290459 | 7_2:-11489778 | Msa1048900:intron |
| TCCTAAGGCTACTAGATAAA+TGG | 0.292386 | 7_2:+11490195 | None:intergenic |
| TTGAAGCTCTGTGATACCTT+TGG | 0.313427 | 7_2:+11489022 | None:intergenic |
| GAACTTAAACATGGGACATT+TGG | 0.326049 | 7_2:-11488640 | Msa1048900:CDS |
| AATATGGTGCATAGCCAAAT+TGG | 0.329437 | 7_2:+11489233 | None:intergenic |
| TGATCCACAAGGTAATTCTT+TGG | 0.330246 | 7_2:+11490252 | None:intergenic |
| GGCATGCTTGGTTGGATTCC+AGG | 0.333777 | 7_2:-11488663 | Msa1048900:CDS |
| AGAACTGGAACTTGGTTTGC+AGG | 0.334798 | 7_2:-11492029 | Msa1048900:CDS |
| TGTATGACTTCAATATCATT+AGG | 0.345321 | 7_2:-11488744 | Msa1048900:CDS |
| GTTGAAGAGTGTTTATCTAA+TGG | 0.346259 | 7_2:-11489812 | Msa1048900:CDS |
| CAACCTAACATTGCTACATT+TGG | 0.350494 | 7_2:-11490160 | Msa1048900:CDS |
| GTACCGCAATATGTACTAAT+AGG | 0.359209 | 7_2:-11488855 | Msa1048900:CDS |
| TCAAAGCTTGACATGCTTGC+AGG | 0.361856 | 7_2:+11489122 | None:intergenic |
| TTTCATGTATGTTGGTCAAT+TGG | 0.368808 | 7_2:-11488820 | Msa1048900:CDS |
| ACTCTTCTCAAACACCATAT+TGG | 0.370740 | 7_2:-11490047 | Msa1048900:CDS |
| CCTGATGGATTGAAGAGCTT+TGG | 0.373551 | 7_2:-11488777 | Msa1048900:CDS |
| TGCAGGAGGGATGTGAAAAT+TGG | 0.386403 | 7_2:+11489139 | None:intergenic |
| ATCTTCAAAATAGTCCAATA+TGG | 0.387201 | 7_2:+11490033 | None:intergenic |
| TTGTTGCAGCAATAAGAAAA+TGG | 0.394125 | 7_2:-11489874 | Msa1048900:CDS |
| GCACCAAATGTAGCAATGTT+AGG | 0.407357 | 7_2:+11490157 | None:intergenic |
| GAAGACAACAGAAAATAATA+TGG | 0.419820 | 7_2:+11489217 | None:intergenic |
| CACAACCATTTGGCTTCAAT+AGG | 0.430672 | 7_2:+11490278 | None:intergenic |
| TGTCCCATGTTTAAGTTCCC+TGG | 0.431807 | 7_2:+11488645 | None:intergenic |
| GATGATGGACTATGGACTTT+GGG | 0.431887 | 7_2:-11490013 | Msa1048900:CDS |
| TCTTTGGACCCACAACCATT+TGG | 0.432330 | 7_2:+11490268 | None:intergenic |
| TTCGAGAGAGAACTGGAACT+TGG | 0.433022 | 7_2:-11492037 | Msa1048900:CDS |
| TATAGATACTTTAAACCTGC+TGG | 0.434208 | 7_2:-11489926 | Msa1048900:CDS |
| TTCTGTTGTCTTCAGCCAAA+TGG | 0.436460 | 7_2:-11489207 | Msa1048900:CDS |
| TATCTAGTAGCCTTAGGAAA+TGG | 0.436717 | 7_2:-11490190 | Msa1048900:CDS |
| CCTGCTGTTCGAGAGAGAAC+TGG | 0.440510 | 7_2:-11492044 | Msa1048900:CDS |
| CTCGAGGTTTGCACATTGGA+TGG | 0.444437 | 7_2:-11492089 | Msa1048900:CDS |
| CAACAAAGAGTGATGCCATT+TGG | 0.461699 | 7_2:+11489192 | None:intergenic |
| CCAAAGCTCTTCAATCCATC+AGG | 0.464327 | 7_2:+11488777 | None:intergenic |
| GAGCTTCAAAGGATGGGAAT+AGG | 0.466371 | 7_2:-11489008 | Msa1048900:CDS |
| TGGTTCTGCTGCCCTAGCAT+TGG | 0.467038 | 7_2:-11489975 | Msa1048900:CDS |
| AGGCGAAGATAAACTTTATG+AGG | 0.468002 | 7_2:-11489834 | Msa1048900:CDS |
| CTATTGAAGCCAAATGGTTG+TGG | 0.473171 | 7_2:-11490277 | Msa1048900:CDS |
| CTGCAGTGAGTGCTGCTAAG+AGG | 0.473539 | 7_2:+11488604 | None:intergenic |
| CCAGTTCTCTCTCGAACAGC+AGG | 0.474623 | 7_2:+11492044 | None:intergenic |
| GAAGAGTGTTTATCTAATGG+AGG | 0.475298 | 7_2:-11489809 | Msa1048900:CDS |
| AAGATATCTACTAGAAATGA+AGG | 0.478705 | 7_2:-11488684 | Msa1048900:CDS |
| AGATGATGGACTATGGACTT+TGG | 0.482372 | 7_2:-11490014 | Msa1048900:CDS |
| CTGCTGGAAACCCTCTTCCT+AGG | 0.482735 | 7_2:-11489910 | Msa1048900:CDS |
| TTTCCTTCATCTTCATCTAT+CGG | 0.483360 | 7_2:-11489085 | Msa1048900:CDS |
| ATATTCCTATTGAAGCCAAA+TGG | 0.485401 | 7_2:-11490283 | Msa1048900:CDS |
| ATGCTAGAGTTGCCAACCCT+TGG | 0.487154 | 7_2:+11491122 | None:intergenic |
| AACAATGTGAGCAAGTGGAC+AGG | 0.488294 | 7_2:-11491028 | Msa1048900:CDS |
| TCCATTTATCTAGTAGCCTT+AGG | 0.491646 | 7_2:-11490196 | Msa1048900:CDS |
| ACTAGAAATGAAGGCATGCT+TGG | 0.492691 | 7_2:-11488675 | Msa1048900:CDS |
| ATCATAGCAATGGTTTCAGC+AGG | 0.494050 | 7_2:-11488972 | Msa1048900:CDS |
| GAAATGAAGGCATGCTTGGT+TGG | 0.507707 | 7_2:-11488671 | Msa1048900:CDS |
| GGCATTAGTGAACCAAGGGT+TGG | 0.509768 | 7_2:-11491134 | Msa1048900:intron |
| TATTGAAGCCAAATGGTTGT+GGG | 0.515070 | 7_2:-11490276 | Msa1048900:CDS |
| CTAGGAAGAGGGTTTCCAGC+AGG | 0.518077 | 7_2:+11489911 | None:intergenic |
| ACCAAAAGATTTGAAGCAGA+TGG | 0.518176 | 7_2:-11489333 | Msa1048900:CDS |
| TTCTATGTGACAGGGTTTGG+TGG | 0.518870 | 7_2:-11490326 | Msa1048900:intron |
| TTCCCCAATAAGAGTCACTA+AGG | 0.520883 | 7_2:+11490972 | None:intergenic |
| TTGATATCCTCCATTTCCTA+AGG | 0.525360 | 7_2:+11490180 | None:intergenic |
| AAGGTATCACAGAGCTTCAA+AGG | 0.526832 | 7_2:-11489019 | Msa1048900:CDS |
| AAAGAAACAAAACCAATGCT+AGG | 0.529942 | 7_2:+11489963 | None:intergenic |
| GCATGCTTGGTTGGATTCCA+GGG | 0.534078 | 7_2:-11488662 | Msa1048900:CDS |
| GAACTGGAACTTGGTTTGCA+GGG | 0.535045 | 7_2:-11492028 | Msa1048900:CDS |
| TTCAATTCACAAGCACCTGA+TGG | 0.536588 | 7_2:-11488792 | Msa1048900:CDS |
| GGAGCTCGAGGTTTGCACAT+TGG | 0.540921 | 7_2:-11492093 | Msa1048900:CDS |
| TATCACAGAGCTTCAAAGGA+TGG | 0.544652 | 7_2:-11489015 | Msa1048900:CDS |
| ACTTGACAAAACCTAGGAAG+AGG | 0.545629 | 7_2:+11489899 | None:intergenic |
| TAAACATGGGACATTTGGAT+AGG | 0.549379 | 7_2:-11488635 | Msa1048900:CDS |
| TTACAATCACAAAGATGACT+TGG | 0.555708 | 7_2:+11490927 | None:intergenic |
| AGTATTAGCAATCATAGCAA+TGG | 0.565482 | 7_2:-11488982 | Msa1048900:CDS |
| ATCACAGAGCTTCAAAGGAT+GGG | 0.566161 | 7_2:-11489014 | Msa1048900:CDS |
| TTCCTTAGTGACTCTTATTG+GGG | 0.567551 | 7_2:-11490974 | Msa1048900:CDS |
| TCTCCGATAGATGAAGATGA+AGG | 0.574939 | 7_2:+11489082 | None:intergenic |
| ATTCCAGGGAACTTAAACAT+GGG | 0.577247 | 7_2:-11488648 | Msa1048900:CDS |
| TGTTGAACAAGGTGCTGCAA+TGG | 0.578747 | 7_2:-11489174 | Msa1048900:CDS |
| AAGAAAATAAATGCAGTCCA+TGG | 0.582775 | 7_2:-11489310 | Msa1048900:CDS |
| GCATCACTCTTTGTTGAACA+AGG | 0.584506 | 7_2:-11489185 | Msa1048900:CDS |
| AAGAGTGTTTATCTAATGGA+GGG | 0.586747 | 7_2:-11489808 | Msa1048900:CDS |
| AAAATTGTAGCCGTTGTGAA+GGG | 0.587450 | 7_2:-11488905 | Msa1048900:CDS |
| TGTATATTGCAATGGCTAAG+TGG | 0.588352 | 7_2:-11488569 | None:intergenic |
| CTTGACAAAACCTAGGAAGA+GGG | 0.589955 | 7_2:+11489900 | None:intergenic |
| CTGCAAACAATGTGAGCAAG+TGG | 0.589984 | 7_2:-11491033 | Msa1048900:CDS |
| CTAGTAGCCTTAGGAAATGG+AGG | 0.594221 | 7_2:-11490187 | Msa1048900:CDS |
| AAGCTTGACATGCTTGCAGG+AGG | 0.599138 | 7_2:+11489125 | None:intergenic |
| TGCAGCAATAAGAAAATGGA+AGG | 0.599680 | 7_2:-11489870 | Msa1048900:CDS |
| AGCTTGACATGCTTGCAGGA+GGG | 0.602861 | 7_2:+11489126 | None:intergenic |
| AAGAAACAAAACCAATGCTA+GGG | 0.607762 | 7_2:+11489964 | None:intergenic |
| GATTCCAGGGAACTTAAACA+TGG | 0.610003 | 7_2:-11488649 | Msa1048900:CDS |
| TCTTGTAGTGTATATTGCAA+TGG | 0.620902 | 7_2:-11488577 | Msa1048900:CDS |
| TGGAAGGTCAAAATGTTCGA+AGG | 0.623695 | 7_2:-11489854 | Msa1048900:CDS |
| ACAAGTGAACAAGGAGCTCG+AGG | 0.633588 | 7_2:-11492105 | Msa1048900:CDS |
| ACAATGTGAGCAAGTGGACA+GGG | 0.634092 | 7_2:-11491027 | Msa1048900:CDS |
| GGGTCCAAAGAATTACCTTG+TGG | 0.636025 | 7_2:-11490256 | Msa1048900:CDS |
| GTCACAGTTGATAGAAACCA+TGG | 0.639054 | 7_2:+11489293 | None:intergenic |
| AGATTTAAAATGAAATCCAA+AGG | 0.648112 | 7_2:-11489038 | Msa1048900:CDS |
| AATGGAGAAACAAGTGAACA+AGG | 0.649738 | 7_2:-11492114 | Msa1048900:CDS |
| GCTCCTATTAGTACATATTG+CGG | 0.670504 | 7_2:+11488852 | None:intergenic |
| ATGAACTCGTCCCTTCACAA+CGG | 0.708648 | 7_2:+11488895 | None:intergenic |
| CTTACCTAAATCCTTGTGTG+TGG | 0.709032 | 7_2:+11489774 | None:intergenic |
| TATGATGAATGTGATCCACA+AGG | 0.710482 | 7_2:+11490241 | None:intergenic |
| GATGGATCTATTGATAGACA+CGG | 0.738265 | 7_2:-11492071 | Msa1048900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAAATTAATTAAAAA+CGG | - | chr7_2:11489932-11489951 | Msa1048900:CDS | 0.0% |
| !!! | GTTTATTTTAAATTTTAAGT+TGG | - | chr7_2:11488910-11488929 | Msa1048900:CDS | 10.0% |
| !!! | TTAAAACTTTTAAAACATAA+AGG | + | chr7_2:11489340-11489359 | None:intergenic | 10.0% |
| !! | AAACAAAAAAAAAAACAATA+TGG | - | chr7_2:11489188-11489207 | Msa1048900:CDS | 10.0% |
| !! | AACAAAAAAAAAAACAATAT+GGG | - | chr7_2:11489189-11489208 | Msa1048900:CDS | 10.0% |
| !!! | TATTAATTAATGTTGAATTT+TGG | - | chr7_2:11489530-11489549 | Msa1048900:intron | 10.0% |
| !!! | TTTCTTTTTTAAACAATATA+TGG | + | chr7_2:11490224-11490243 | None:intergenic | 10.0% |
| !!! | ATTTTTTAGCTATTTTTATT+TGG | - | chr7_2:11490599-11490618 | Msa1048900:intron | 10.0% |
| !! | ATATATACATATATGATATA+TGG | + | chr7_2:11491160-11491179 | None:intergenic | 10.0% |
| !!! | ATGTTTTAAAAGTTTTAAGT+TGG | + | chr7_2:11488939-11488958 | None:intergenic | 15.0% |
| !!! | CTTAAAACTTTTAAAACATA+AGG | - | chr7_2:11489339-11489358 | Msa1048900:CDS | 15.0% |
| !!! | TATGTTTTAAGTAATTTTGT+TGG | - | chr7_2:11489806-11489825 | Msa1048900:CDS | 15.0% |
| !!! | AAATATACCAAATTTTAGTT+TGG | + | chr7_2:11490000-11490019 | None:intergenic | 15.0% |
| !!! | TTAAGTTTGACTTTAAAATA+AGG | + | chr7_2:11490046-11490065 | None:intergenic | 15.0% |
| !!! | TTATTTTAAAGTCAAACTTA+AGG | - | chr7_2:11490045-11490064 | Msa1048900:CDS | 15.0% |
| !!! | TGTATTTTACTTCAATATAA+AGG | + | chr7_2:11490988-11491007 | None:intergenic | 15.0% |
| !! | AAGTAAAATACAAACAAATA+TGG | - | chr7_2:11490996-11491015 | Msa1048900:CDS | 15.0% |
| !!! | GAATTTAAACTAATTTTTCT+AGG | - | chr7_2:11491303-11491322 | Msa1048900:intron | 15.0% |
| !! | AAAATGATTAATTGCATGTT+TGG | - | chr7_2:11488879-11488898 | Msa1048900:CDS | 20.0% |
| !! | CTTTGATTGTTTAAACAATA+CGG | - | chr7_2:11489035-11489054 | Msa1048900:CDS | 20.0% |
| !! | TTTGATTGTTTAAACAATAC+GGG | - | chr7_2:11489036-11489055 | Msa1048900:CDS | 20.0% |
| !! | CAAAATATTACAAAAACAAG+CGG | + | chr7_2:11489072-11489091 | None:intergenic | 20.0% |
| !! | TTTGTTTGAAGAAACAAAAT+TGG | + | chr7_2:11489175-11489194 | None:intergenic | 20.0% |
| !! | TTTATAAAATTTGTATTCCC+AGG | + | chr7_2:11489504-11489523 | None:intergenic | 20.0% |
| !! | TAGCTACTAATTAGAAAAAA+TGG | - | chr7_2:11489865-11489884 | Msa1048900:CDS | 20.0% |
| !! | AGCTACTAATTAGAAAAAAT+GGG | - | chr7_2:11489866-11489885 | Msa1048900:CDS | 20.0% |
| !! | TTTAAAAAAGAAAGACATGA+TGG | - | chr7_2:11490231-11490250 | Msa1048900:CDS | 20.0% |
| !! | TTAAAAAAGAAAGACATGAT+GGG | - | chr7_2:11490232-11490251 | Msa1048900:CDS | 20.0% |
| !!! | TCATATATAGTTTTAAATCG+AGG | + | chr7_2:11491093-11491112 | None:intergenic | 20.0% |
| !!! | TATTTTAGTCTTGATTACTA+TGG | - | chr7_2:11491240-11491259 | Msa1048900:intron | 20.0% |
| !! | TATTAAGATTACTACCAATT+TGG | - | chr7_2:11491438-11491457 | Msa1048900:intron | 20.0% |
| !!! | AGATTTAAAATGAAATCCAA+AGG | - | chr7_2:11491647-11491666 | Msa1048900:intron | 20.0% |
| !!! | ATGTTTTGACAATTTCAAGT+TGG | - | chr7_2:11488968-11488987 | Msa1048900:CDS | 25.0% |
| ! | CAATCAAAGAAAATAAGAGA+CGG | + | chr7_2:11489024-11489043 | None:intergenic | 25.0% |
| !!! | CGCTTGTTTTTGTAATATTT+TGG | - | chr7_2:11489070-11489089 | Msa1048900:CDS | 25.0% |
| ! | AACAATTAAGTCACTATACA+AGG | - | chr7_2:11489472-11489491 | Msa1048900:intron | 25.0% |
| ! | ACAATTAAGTCACTATACAA+GGG | - | chr7_2:11489473-11489492 | Msa1048900:intron | 25.0% |
| ! | TAATTAAAAACGGGAAATTG+AGG | - | chr7_2:11489942-11489961 | Msa1048900:CDS | 25.0% |
| ! | AAAAGGACCAAACTAAAATT+TGG | - | chr7_2:11489990-11490009 | Msa1048900:CDS | 25.0% |
| ! | GTCTCAGTATTGTTTAAAAA+AGG | - | chr7_2:11490132-11490151 | Msa1048900:CDS | 25.0% |
| ! | TTAATAATGTTCTATGTGAC+AGG | - | chr7_2:11490350-11490369 | Msa1048900:intron | 25.0% |
| ! | TAATAATGTTCTATGTGACA+GGG | - | chr7_2:11490351-11490370 | Msa1048900:intron | 25.0% |
| !!! | TTTTATTTGGCTTTGAACAT+TGG | - | chr7_2:11490612-11490631 | Msa1048900:intron | 25.0% |
| ! | ATCTTCAAAATAGTCCAATA+TGG | + | chr7_2:11490655-11490674 | None:intergenic | 25.0% |
| ! | GTATATATAGTCAAGATCAT+AGG | - | chr7_2:11491172-11491191 | Msa1048900:intron | 25.0% |
| ! | ATAGGTTGTATAATTGTTGT+AGG | - | chr7_2:11491190-11491209 | Msa1048900:intron | 25.0% |
| !! | TTGATTACTATGGTTTGTAT+AGG | - | chr7_2:11491250-11491269 | Msa1048900:intron | 25.0% |
| ! | GAAGACAACAGAAAATAATA+TGG | + | chr7_2:11491471-11491490 | None:intergenic | 25.0% |
| ! | TGTATGACTTCAATATCATT+AGG | - | chr7_2:11491941-11491960 | Msa1048900:intron | 25.0% |
| ! | AAGATATCTACTAGAAATGA+AGG | - | chr7_2:11492001-11492020 | Msa1048900:intron | 25.0% |
| !!! | TTTGCAGGGATTTTGATTTT+AGG | - | chr7_2:11488671-11488690 | Msa1048900:CDS | 30.0% |
| TGTTTAAACAATACGGGTAT+CGG | - | chr7_2:11489042-11489061 | Msa1048900:CDS | 30.0% | |
| ACTTAATATTATGTCGCGTA+AGG | - | chr7_2:11489278-11489297 | Msa1048900:CDS | 30.0% | |
| CTTAATATTATGTCGCGTAA+GGG | - | chr7_2:11489279-11489298 | Msa1048900:CDS | 30.0% | |
| ACCAATTAAGTCACTATACA+AGG | - | chr7_2:11489394-11489413 | Msa1048900:intron | 30.0% | |
| CCAATTAAGTCACTATACAA+GGG | - | chr7_2:11489395-11489414 | Msa1048900:intron | 30.0% | |
| ACTATACAAGGGAAATATCT+TGG | - | chr7_2:11489406-11489425 | Msa1048900:intron | 30.0% | |
| TTGATATCACTAGAGATGTA+TGG | + | chr7_2:11489452-11489471 | None:intergenic | 30.0% | |
| !!! | ACTATTTTTGACAAGAGTGA+TGG | - | chr7_2:11489611-11489630 | Msa1048900:intron | 30.0% |
| !!! | CTATTTTTGACAAGAGTGAT+GGG | - | chr7_2:11489612-11489631 | Msa1048900:intron | 30.0% |
| TTTCCTTAGTGACTCTTATT+GGG | - | chr7_2:11489710-11489729 | Msa1048900:intron | 30.0% | |
| TTACAATCACAAAGATGACT+TGG | + | chr7_2:11489761-11489780 | None:intergenic | 30.0% | |
| ACCATATAAAATATGGTCGA+TGG | + | chr7_2:11490158-11490177 | None:intergenic | 30.0% | |
| CTCTCACACCATATAAAATA+TGG | + | chr7_2:11490165-11490184 | None:intergenic | 30.0% | |
| ! | ATTTTATATGGTGTGAGAGT+AGG | - | chr7_2:11490166-11490185 | Msa1048900:CDS | 30.0% |
| ! | TATTCTCTTTTTACATCCCT+CGG | + | chr7_2:11490266-11490285 | None:intergenic | 30.0% |
| AGGGATGTAAAAAGAGAATA+AGG | - | chr7_2:11490266-11490285 | Msa1048900:CDS | 30.0% | |
| GGGATGTAAAAAGAGAATAA+GGG | - | chr7_2:11490267-11490286 | Msa1048900:CDS | 30.0% | |
| ATATTCCTATTGAAGCCAAA+TGG | - | chr7_2:11490402-11490421 | Msa1048900:intron | 30.0% | |
| !!! | TTTTTGAGTGTTGTTCACTA+GGG | + | chr7_2:11490575-11490594 | None:intergenic | 30.0% |
| !!! | ATTTTTGAGTGTTGTTCACT+AGG | + | chr7_2:11490576-11490595 | None:intergenic | 30.0% |
| !! | TTGGACTATTTTGAAGATGA+TGG | - | chr7_2:11490657-11490676 | Msa1048900:intron | 30.0% |
| !!! | ATTTTGAAGATGATGGACTA+TGG | - | chr7_2:11490664-11490683 | Msa1048900:intron | 30.0% |
| AAGAAACAAAACCAATGCTA+GGG | + | chr7_2:11490724-11490743 | None:intergenic | 30.0% | |
| AAAGAAACAAAACCAATGCT+AGG | + | chr7_2:11490725-11490744 | None:intergenic | 30.0% | |
| TATAGATACTTTAAACCTGC+TGG | - | chr7_2:11490759-11490778 | Msa1048900:intron | 30.0% | |
| ACAAAAACTTGACAAAACCT+AGG | + | chr7_2:11490795-11490814 | None:intergenic | 30.0% | |
| TTGTTGCAGCAATAAGAAAA+TGG | - | chr7_2:11490811-11490830 | Msa1048900:intron | 30.0% | |
| !! | GTTGAAGAGTGTTTATCTAA+TGG | - | chr7_2:11490873-11490892 | Msa1048900:intron | 30.0% |
| !! | AAGAGTGTTTATCTAATGGA+GGG | - | chr7_2:11490877-11490896 | Msa1048900:intron | 30.0% |
| TTAGGTAAGCATTTCAGTTA+TGG | - | chr7_2:11490925-11490944 | Msa1048900:intron | 30.0% | |
| ! | TGATGATGAATTGTCACTAA+TGG | - | chr7_2:11491281-11491300 | Msa1048900:intron | 30.0% |
| AAGAAAATAAATGCAGTCCA+TGG | - | chr7_2:11491375-11491394 | Msa1048900:intron | 30.0% | |
| TTTCCTTCATCTTCATCTAT+CGG | - | chr7_2:11491600-11491619 | Msa1048900:intron | 30.0% | |
| ! | TTTTAAATCTCGCAACAAGA+GGG | + | chr7_2:11491637-11491656 | None:intergenic | 30.0% |
| ! | ATTTTAAATCTCGCAACAAG+AGG | + | chr7_2:11491638-11491657 | None:intergenic | 30.0% |
| AGTATTAGCAATCATAGCAA+TGG | - | chr7_2:11491703-11491722 | Msa1048900:intron | 30.0% | |
| ! | TCAGAAGTTTTCATGTATGT+TGG | - | chr7_2:11491857-11491876 | Msa1048900:intron | 30.0% |
| TTTCATGTATGTTGGTCAAT+TGG | - | chr7_2:11491865-11491884 | Msa1048900:intron | 30.0% | |
| TCTTGTAGTGTATATTGCAA+TGG | - | chr7_2:11492108-11492127 | Msa1048900:CDS | 30.0% | |
| GATGGATCTATTGATAGACA+CGG | - | chr7_2:11488614-11488633 | Msa1048900:CDS | 35.0% | |
| ! | TTCTAACGTGGATAACGTTT+TGG | - | chr7_2:11489311-11489330 | Msa1048900:CDS | 35.0% |
| CCCTTGTATAGTGACTTAAT+TGG | + | chr7_2:11489398-11489417 | None:intergenic | 35.0% | |
| ACTATACAAGGGAAATACCT+GGG | - | chr7_2:11489484-11489503 | Msa1048900:intron | 35.0% | |
| !! | ATTTTGGCATTAGTGAACCA+AGG | - | chr7_2:11489546-11489565 | Msa1048900:intron | 35.0% |
| ! | TTTTGGCATTAGTGAACCAA+GGG | - | chr7_2:11489547-11489566 | Msa1048900:intron | 35.0% |
| !!! | TTGGCAACTCTAGCATTTTT+TGG | - | chr7_2:11489570-11489589 | Msa1048900:intron | 35.0% |
| !!! | AACTCTAGCATTTTTTGGTG+TGG | - | chr7_2:11489575-11489594 | Msa1048900:intron | 35.0% |
| !!! | ACTCTAGCATTTTTTGGTGT+GGG | - | chr7_2:11489576-11489595 | Msa1048900:intron | 35.0% |
| GTTTACATCTTCTCTCTTCT+TGG | - | chr7_2:11489684-11489703 | Msa1048900:intron | 35.0% | |
| CTTTCCTTAGTGACTCTTAT+TGG | - | chr7_2:11489709-11489728 | Msa1048900:intron | 35.0% | |
| TTCCTTAGTGACTCTTATTG+GGG | - | chr7_2:11489711-11489730 | Msa1048900:intron | 35.0% | |
| ! | CACAAAGATGACTTGGAAAA+TGG | + | chr7_2:11489754-11489773 | None:intergenic | 35.0% |
| ACCATCATACAAAATCCGAA+GGG | - | chr7_2:11490110-11490129 | Msa1048900:CDS | 35.0% | |
| TAAACAATACTGAGACCCTT+CGG | + | chr7_2:11490128-11490147 | None:intergenic | 35.0% | |
| ! | GCCATCGACCATATTTTATA+TGG | - | chr7_2:11490154-11490173 | Msa1048900:CDS | 35.0% |
| ! | ATGATGGGAAATAAAACCGA+GGG | - | chr7_2:11490247-11490266 | Msa1048900:CDS | 35.0% |
| ! | TTTTCACGAGCACAAAAAGA+TGG | + | chr7_2:11490330-11490349 | None:intergenic | 35.0% |
| TATTGAAGCCAAATGGTTGT+GGG | - | chr7_2:11490409-11490428 | Msa1048900:intron | 35.0% | |
| TGATCCACAAGGTAATTCTT+TGG | + | chr7_2:11490436-11490455 | None:intergenic | 35.0% | |
| TATGATGAATGTGATCCACA+AGG | + | chr7_2:11490447-11490466 | None:intergenic | 35.0% | |
| TCCATTTATCTAGTAGCCTT+AGG | - | chr7_2:11490489-11490508 | Msa1048900:intron | 35.0% | |
| TCCTAAGGCTACTAGATAAA+TGG | + | chr7_2:11490493-11490512 | None:intergenic | 35.0% | |
| ! | TATCTAGTAGCCTTAGGAAA+TGG | - | chr7_2:11490495-11490514 | Msa1048900:intron | 35.0% |
| TTGATATCCTCCATTTCCTA+AGG | + | chr7_2:11490508-11490527 | None:intergenic | 35.0% | |
| CAACCTAACATTGCTACATT+TGG | - | chr7_2:11490525-11490544 | Msa1048900:intron | 35.0% | |
| ACTCTTCTCAAACACCATAT+TGG | - | chr7_2:11490638-11490657 | Msa1048900:intron | 35.0% | |
| !!! | GCATTGGTTTTGTTTCTTTG+TGG | - | chr7_2:11490726-11490745 | Msa1048900:intron | 35.0% |
| TGCAGCAATAAGAAAATGGA+AGG | - | chr7_2:11490815-11490834 | Msa1048900:intron | 35.0% | |
| AGGCGAAGATAAACTTTATG+AGG | - | chr7_2:11490851-11490870 | Msa1048900:intron | 35.0% | |
| !! | GAAGAGTGTTTATCTAATGG+AGG | - | chr7_2:11490876-11490895 | Msa1048900:intron | 35.0% |
| AGAAAAATGTACCACACACA+AGG | - | chr7_2:11490900-11490919 | Msa1048900:intron | 35.0% | |
| ACAAACAAATATGGTCGATG+CGG | - | chr7_2:11491005-11491024 | Msa1048900:CDS | 35.0% | |
| ! | ACCAAAAGATTTGAAGCAGA+TGG | - | chr7_2:11491352-11491371 | Msa1048900:intron | 35.0% |
| ! | TCCATCTGCTTCAAATCTTT+TGG | + | chr7_2:11491356-11491375 | None:intergenic | 35.0% |
| AATATGGTGCATAGCCAAAT+TGG | + | chr7_2:11491455-11491474 | None:intergenic | 35.0% | |
| !! | CAGGATTAGTAGAGATTTTC+CGG | - | chr7_2:11491732-11491751 | Msa1048900:intron | 35.0% |
| ! | CTTTTATCGCATACTTTAGC+CGG | + | chr7_2:11491754-11491773 | None:intergenic | 35.0% |
| AAAAATTGTAGCCGTTGTGA+AGG | - | chr7_2:11491779-11491798 | Msa1048900:intron | 35.0% | |
| AAAATTGTAGCCGTTGTGAA+GGG | - | chr7_2:11491780-11491799 | Msa1048900:intron | 35.0% | |
| ! | CGAGTTCATTGTCGATATTT+TGG | - | chr7_2:11491804-11491823 | Msa1048900:intron | 35.0% |
| GTACCGCAATATGTACTAAT+AGG | - | chr7_2:11491830-11491849 | Msa1048900:intron | 35.0% | |
| GCTCCTATTAGTACATATTG+CGG | + | chr7_2:11491836-11491855 | None:intergenic | 35.0% | |
| ATTCCAGGGAACTTAAACAT+GGG | - | chr7_2:11492037-11492056 | Msa1048900:CDS | 35.0% | |
| GAACTTAAACATGGGACATT+TGG | - | chr7_2:11492045-11492064 | Msa1048900:CDS | 35.0% | |
| TAAACATGGGACATTTGGAT+AGG | - | chr7_2:11492050-11492069 | Msa1048900:CDS | 35.0% | |
| GGGACTAACTTATTCTAACG+TGG | - | chr7_2:11489299-11489318 | Msa1048900:CDS | 40.0% | |
| CACTATACAAGGGAAATACC+TGG | - | chr7_2:11489483-11489502 | Msa1048900:intron | 40.0% | |
| TTCCCCAATAAGAGTCACTA+AGG | + | chr7_2:11489716-11489735 | None:intergenic | 40.0% | |
| AGCGTATGAGTGAAAAAGAC+TGG | - | chr7_2:11490072-11490091 | Msa1048900:CDS | 40.0% | |
| GACCATCATACAAAATCCGA+AGG | - | chr7_2:11490109-11490128 | Msa1048900:CDS | 40.0% | |
| ! | ACCCTTCGGATTTTGTATGA+TGG | + | chr7_2:11490114-11490133 | None:intergenic | 40.0% |
| ! | CATGATGGGAAATAAAACCG+AGG | - | chr7_2:11490246-11490265 | Msa1048900:CDS | 40.0% |
| ATGTTCTATGTGACAGGGTT+TGG | - | chr7_2:11490356-11490375 | Msa1048900:intron | 40.0% | |
| ! | CACAACCATTTGGCTTCAAT+AGG | + | chr7_2:11490410-11490429 | None:intergenic | 40.0% |
| CTATTGAAGCCAAATGGTTG+TGG | - | chr7_2:11490408-11490427 | Msa1048900:intron | 40.0% | |
| GCACCAAATGTAGCAATGTT+AGG | + | chr7_2:11490531-11490550 | None:intergenic | 40.0% | |
| !! | AGATGATGGACTATGGACTT+TGG | - | chr7_2:11490671-11490690 | Msa1048900:intron | 40.0% |
| !! | GATGATGGACTATGGACTTT+GGG | - | chr7_2:11490672-11490691 | Msa1048900:intron | 40.0% |
| ! | TTGGGATTTTGTGTATCAGC+TGG | - | chr7_2:11490690-11490709 | Msa1048900:intron | 40.0% |
| CTTGACAAAACCTAGGAAGA+GGG | + | chr7_2:11490788-11490807 | None:intergenic | 40.0% | |
| ACTTGACAAAACCTAGGAAG+AGG | + | chr7_2:11490789-11490808 | None:intergenic | 40.0% | |
| TGGAAGGTCAAAATGTTCGA+AGG | - | chr7_2:11490831-11490850 | Msa1048900:intron | 40.0% | |
| TGTACCACACACAAGGATTT+AGG | - | chr7_2:11490907-11490926 | Msa1048900:intron | 40.0% | |
| CTTACCTAAATCCTTGTGTG+TGG | + | chr7_2:11490914-11490933 | None:intergenic | 40.0% | |
| !! | GTCACAGTTGATAGAAACCA+TGG | + | chr7_2:11491395-11491414 | None:intergenic | 40.0% |
| TTCTGTTGTCTTCAGCCAAA+TGG | - | chr7_2:11491478-11491497 | Msa1048900:intron | 40.0% | |
| CAACAAAGAGTGATGCCATT+TGG | + | chr7_2:11491496-11491515 | None:intergenic | 40.0% | |
| GCATCACTCTTTGTTGAACA+AGG | - | chr7_2:11491500-11491519 | Msa1048900:intron | 40.0% | |
| TCTCCGATAGATGAAGATGA+AGG | + | chr7_2:11491606-11491625 | None:intergenic | 40.0% | |
| TTGAAGCTCTGTGATACCTT+TGG | + | chr7_2:11491666-11491685 | None:intergenic | 40.0% | |
| ! | AAGGTATCACAGAGCTTCAA+AGG | - | chr7_2:11491666-11491685 | Msa1048900:intron | 40.0% |
| TATCACAGAGCTTCAAAGGA+TGG | - | chr7_2:11491670-11491689 | Msa1048900:intron | 40.0% | |
| ATCACAGAGCTTCAAAGGAT+GGG | - | chr7_2:11491671-11491690 | Msa1048900:intron | 40.0% | |
| ATCATAGCAATGGTTTCAGC+AGG | - | chr7_2:11491713-11491732 | Msa1048900:intron | 40.0% | |
| TTCAATTCACAAGCACCTGA+TGG | - | chr7_2:11491893-11491912 | Msa1048900:intron | 40.0% | |
| ! | ACTAGAAATGAAGGCATGCT+TGG | - | chr7_2:11492010-11492029 | Msa1048900:intron | 40.0% |
| GATTCCAGGGAACTTAAACA+TGG | - | chr7_2:11492036-11492055 | Msa1048900:CDS | 40.0% | |
| TTCGAGAGAGAACTGGAACT+TGG | - | chr7_2:11488648-11488667 | Msa1048900:CDS | 45.0% | |
| !! | AGAACTGGAACTTGGTTTGC+AGG | - | chr7_2:11488656-11488675 | Msa1048900:CDS | 45.0% |
| !! | GAACTGGAACTTGGTTTGCA+GGG | - | chr7_2:11488657-11488676 | Msa1048900:CDS | 45.0% |
| AGCACAAGGCATACCAAAGA+GGG | + | chr7_2:11489119-11489138 | None:intergenic | 45.0% | |
| TAGCACAAGGCATACCAAAG+AGG | + | chr7_2:11489120-11489139 | None:intergenic | 45.0% | |
| TGGTATGCCTTGTGCTAAAG+AGG | - | chr7_2:11489123-11489142 | Msa1048900:CDS | 45.0% | |
| !! | TTTTGGTGTGGGAGTGAATC+TGG | - | chr7_2:11489587-11489606 | Msa1048900:intron | 45.0% |
| CTGCAAACAATGTGAGCAAG+TGG | - | chr7_2:11489652-11489671 | Msa1048900:intron | 45.0% | |
| AACAATGTGAGCAAGTGGAC+AGG | - | chr7_2:11489657-11489676 | Msa1048900:intron | 45.0% | |
| ACAATGTGAGCAAGTGGACA+GGG | - | chr7_2:11489658-11489677 | Msa1048900:intron | 45.0% | |
| TTCTATGTGACAGGGTTTGG+TGG | - | chr7_2:11490359-11490378 | Msa1048900:intron | 45.0% | |
| TCTTTGGACCCACAACCATT+TGG | + | chr7_2:11490420-11490439 | None:intergenic | 45.0% | |
| GGGTCCAAAGAATTACCTTG+TGG | - | chr7_2:11490429-11490448 | Msa1048900:intron | 45.0% | |
| ! | CTAGTAGCCTTAGGAAATGG+AGG | - | chr7_2:11490498-11490517 | Msa1048900:intron | 45.0% |
| !! | TGTTGAACAAGGTGCTGCAA+TGG | - | chr7_2:11491511-11491530 | Msa1048900:intron | 45.0% |
| TGCAGGAGGGATGTGAAAAT+TGG | + | chr7_2:11491549-11491568 | None:intergenic | 45.0% | |
| TCAAAGCTTGACATGCTTGC+AGG | + | chr7_2:11491566-11491585 | None:intergenic | 45.0% | |
| GAGCTTCAAAGGATGGGAAT+AGG | - | chr7_2:11491677-11491696 | Msa1048900:intron | 45.0% | |
| ATGAACTCGTCCCTTCACAA+CGG | + | chr7_2:11491793-11491812 | None:intergenic | 45.0% | |
| CCAAAGCTCTTCAATCCATC+AGG | + | chr7_2:11491911-11491930 | None:intergenic | 45.0% | |
| !! | CCTGATGGATTGAAGAGCTT+TGG | - | chr7_2:11491908-11491927 | Msa1048900:intron | 45.0% |
| ! | GAAATGAAGGCATGCTTGGT+TGG | - | chr7_2:11492014-11492033 | Msa1048900:intron | 45.0% |
| ! | TGTCCCATGTTTAAGTTCCC+TGG | + | chr7_2:11492043-11492062 | None:intergenic | 45.0% |
| !! | ATTAAAAATTAATTAAAAAC+GGG | - | chr7_2:11489933-11489952 | Msa1048900:CDS | 5.0% |
| !! | ATTTGAAAATATAATTTAAA+AGG | - | chr7_2:11489973-11489992 | Msa1048900:CDS | 5.0% |
| ACAAGTGAACAAGGAGCTCG+AGG | - | chr7_2:11488580-11488599 | Msa1048900:CDS | 50.0% | |
| CTCGAGGTTTGCACATTGGA+TGG | - | chr7_2:11488596-11488615 | Msa1048900:CDS | 50.0% | |
| GTATTCTTGAGCGCCCTCTT+TGG | - | chr7_2:11489103-11489122 | Msa1048900:CDS | 50.0% | |
| AGAGACGCCTCTTTAGCACA+AGG | + | chr7_2:11489133-11489152 | None:intergenic | 50.0% | |
| GGCATTAGTGAACCAAGGGT+TGG | - | chr7_2:11489551-11489570 | Msa1048900:intron | 50.0% | |
| ATGCTAGAGTTGCCAACCCT+TGG | + | chr7_2:11489566-11489585 | None:intergenic | 50.0% | |
| AGCTTGACATGCTTGCAGGA+GGG | + | chr7_2:11491562-11491581 | None:intergenic | 50.0% | |
| AAGCTTGACATGCTTGCAGG+AGG | + | chr7_2:11491563-11491582 | None:intergenic | 50.0% | |
| GCATGCTTGGTTGGATTCCA+GGG | - | chr7_2:11492023-11492042 | Msa1048900:CDS | 50.0% | |
| GGAGCTCGAGGTTTGCACAT+TGG | - | chr7_2:11488592-11488611 | Msa1048900:CDS | 55.0% | |
| CCAGTTCTCTCTCGAACAGC+AGG | + | chr7_2:11488644-11488663 | None:intergenic | 55.0% | |
| CCTGCTGTTCGAGAGAGAAC+TGG | - | chr7_2:11488641-11488660 | Msa1048900:CDS | 55.0% | |
| ! | TGGTTCTGCTGCCCTAGCAT+TGG | - | chr7_2:11490710-11490729 | Msa1048900:intron | 55.0% |
| CTAGGAAGAGGGTTTCCAGC+AGG | + | chr7_2:11490777-11490796 | None:intergenic | 55.0% | |
| CTGCTGGAAACCCTCTTCCT+AGG | - | chr7_2:11490775-11490794 | Msa1048900:intron | 55.0% | |
| GGCATGCTTGGTTGGATTCC+AGG | - | chr7_2:11492022-11492041 | Msa1048900:CDS | 55.0% | |
| ! | CTGCAGTGAGTGCTGCTAAG+AGG | + | chr7_2:11492084-11492103 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 11488572 | 11492135 | 11488572 | ID=Msa1048900;Name=Msa1048900 |
| chr7_2 | mRNA | 11488572 | 11492135 | 11488572 | ID=Msa1048900-mRNA-1;Parent=Msa1048900;Name=Msa1048900-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.66|0.25|1|1|0.75|4|0|569 |
| chr7_2 | exon | 11492015 | 11492135 | 11492015 | ID=Msa1048900-mRNA-1:exon:2911;Parent=Msa1048900-mRNA-1 |
| chr7_2 | exon | 11490931 | 11491148 | 11490931 | ID=Msa1048900-mRNA-1:exon:2910;Parent=Msa1048900-mRNA-1 |
| chr7_2 | exon | 11489779 | 11490335 | 11489779 | ID=Msa1048900-mRNA-1:exon:2909;Parent=Msa1048900-mRNA-1 |
| chr7_2 | exon | 11488572 | 11489382 | 11488572 | ID=Msa1048900-mRNA-1:exon:2908;Parent=Msa1048900-mRNA-1 |
| chr7_2 | CDS | 11492015 | 11492135 | 11492015 | ID=Msa1048900-mRNA-1:cds;Parent=Msa1048900-mRNA-1 |
| chr7_2 | CDS | 11490931 | 11491148 | 11490931 | ID=Msa1048900-mRNA-1:cds;Parent=Msa1048900-mRNA-1 |
| chr7_2 | CDS | 11489779 | 11490335 | 11489779 | ID=Msa1048900-mRNA-1:cds;Parent=Msa1048900-mRNA-1 |
| chr7_2 | CDS | 11488572 | 11489382 | 11488572 | ID=Msa1048900-mRNA-1:cds;Parent=Msa1048900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
