Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108710 | XP_013449157.1 | 96.949 | 295 | 6 | 3 | 1 | 294 | 1 | 293 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108710 | sp|Q9SDW0|TGT3A_ARATH | 55.056 | 267 | 96 | 3 | 50 | 292 | 47 | 313 | 9.33e-74 | 232 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108710 | A0A072U082 | 96.949 | 295 | 6 | 3 | 1 | 294 | 1 | 293 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1108710 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012710 | Msa1108710 | 0.804448 | 2.149978e-49 | -8.615850e-47 |
| Msa0016510 | Msa1108710 | 0.800899 | 1.160817e-48 | -8.615850e-47 |
| Msa0026630 | Msa1108710 | 0.808153 | 3.561332e-50 | -8.615850e-47 |
| Msa0032080 | Msa1108710 | 0.800079 | 1.705549e-48 | -8.615850e-47 |
| Msa0032470 | Msa1108710 | 0.812865 | 3.418366e-51 | -8.615850e-47 |
| Msa0052360 | Msa1108710 | 0.834227 | 3.384986e-56 | -8.615850e-47 |
| Msa0054920 | Msa1108710 | 0.809673 | 1.684979e-50 | -8.615850e-47 |
| Msa0058310 | Msa1108710 | 0.812072 | 5.095250e-51 | -8.615850e-47 |
| Msa0061500 | Msa1108710 | 0.805936 | 1.049433e-49 | -8.615850e-47 |
| Msa0071250 | Msa1108710 | 0.819950 | 8.872902e-53 | -8.615850e-47 |
| Msa0081650 | Msa1108710 | 0.801017 | 1.098104e-48 | -8.615850e-47 |
| Msa0090510 | Msa1108710 | 0.835070 | 2.078375e-56 | -8.615850e-47 |
| Msa0090550 | Msa1108710 | 0.822048 | 2.917124e-53 | -8.615850e-47 |
| Msa0092410 | Msa1108710 | 0.828346 | 9.462462e-55 | -8.615850e-47 |
| Msa0097370 | Msa1108710 | 0.828753 | 7.543368e-55 | -8.615850e-47 |
| Msa0102140 | Msa1108710 | 0.817543 | 3.122533e-52 | -8.615850e-47 |
| Msa0103250 | Msa1108710 | 0.818493 | 1.904939e-52 | -8.615850e-47 |
| Msa0106620 | Msa1108710 | 0.829736 | 4.356875e-55 | -8.615850e-47 |
| Msa0106710 | Msa1108710 | 0.831998 | 1.214637e-55 | -8.615850e-47 |
| Msa0117520 | Msa1108710 | 0.828139 | 1.061411e-54 | -8.615850e-47 |
| Msa0604290 | Msa1108710 | 0.819094 | 1.390748e-52 | -8.615850e-47 |
| Msa0610250 | Msa1108710 | 0.801871 | 7.338526e-49 | -8.615850e-47 |
| Msa0613110 | Msa1108710 | 0.832131 | 1.125908e-55 | -8.615850e-47 |
| Msa0613340 | Msa1108710 | 0.831846 | 1.324529e-55 | -8.615850e-47 |
| Msa0616450 | Msa1108710 | 0.803290 | 3.740129e-49 | -8.615850e-47 |
| Msa0623990 | Msa1108710 | 0.832050 | 1.179197e-55 | -8.615850e-47 |
| Msa0624060 | Msa1108710 | 0.836993 | 6.755421e-57 | -8.615850e-47 |
| Msa0641130 | Msa1108710 | 0.818965 | 1.488056e-52 | -8.615850e-47 |
| Msa0645530 | Msa1108710 | 0.807111 | 5.928598e-50 | -8.615850e-47 |
| Msa0651560 | Msa1108710 | 0.803592 | 3.238371e-49 | -8.615850e-47 |
| Msa0655920 | Msa1108710 | 0.809366 | 1.960820e-50 | -8.615850e-47 |
| Msa0656000 | Msa1108710 | 0.802848 | 4.616587e-49 | -8.615850e-47 |
| Msa0658680 | Msa1108710 | 0.828328 | 9.553976e-55 | -8.615850e-47 |
| Msa0662540 | Msa1108710 | 0.800430 | 1.446466e-48 | -8.615850e-47 |
| Msa0667740 | Msa1108710 | 0.804993 | 1.654565e-49 | -8.615850e-47 |
| Msa0673120 | Msa1108710 | 0.824079 | 9.800344e-54 | -8.615850e-47 |
| Msa0676130 | Msa1108710 | 0.829594 | 4.718097e-55 | -8.615850e-47 |
| Msa0676180 | Msa1108710 | 0.828997 | 6.585374e-55 | -8.615850e-47 |
| Msa0685090 | Msa1108710 | 0.814670 | 1.368516e-51 | -8.615850e-47 |
| Msa0697680 | Msa1108710 | 0.808689 | 2.737502e-50 | -8.615850e-47 |
| Msa0701100 | Msa1108710 | 0.805795 | 1.123357e-49 | -8.615850e-47 |
| Msa0703440 | Msa1108710 | 0.801320 | 9.518791e-49 | -8.615850e-47 |
| Msa0705990 | Msa1108710 | 0.844678 | 6.514210e-59 | -8.615850e-47 |
| Msa0709120 | Msa1108710 | 0.844329 | 8.087806e-59 | -8.615850e-47 |
| Msa0709160 | Msa1108710 | 0.807226 | 5.606686e-50 | -8.615850e-47 |
| Msa0721340 | Msa1108710 | 0.804124 | 2.510914e-49 | -8.615850e-47 |
| Msa0724170 | Msa1108710 | 0.829391 | 5.286013e-55 | -8.615850e-47 |
| Msa0732600 | Msa1108710 | 0.811413 | 7.088414e-51 | -8.615850e-47 |
| Msa0733010 | Msa1108710 | 0.807925 | 3.983610e-50 | -8.615850e-47 |
| Msa0738030 | Msa1108710 | 0.827766 | 1.304872e-54 | -8.615850e-47 |
| Msa0741070 | Msa1108710 | 0.826671 | 2.386368e-54 | -8.615850e-47 |
| Msa0741440 | Msa1108710 | 0.800021 | 1.751762e-48 | -8.615850e-47 |
| Msa0746170 | Msa1108710 | 0.809063 | 2.276402e-50 | -8.615850e-47 |
| Msa0746210 | Msa1108710 | 0.812419 | 4.281216e-51 | -8.615850e-47 |
| Msa0750810 | Msa1108710 | 0.811643 | 6.318570e-51 | -8.615850e-47 |
| Msa0750850 | Msa1108710 | 0.802003 | 6.894204e-49 | -8.615850e-47 |
| Msa0756380 | Msa1108710 | 0.823201 | 1.573500e-53 | -8.615850e-47 |
| Msa0763920 | Msa1108710 | 0.806509 | 7.945332e-50 | -8.615850e-47 |
| Msa0764920 | Msa1108710 | 0.815361 | 9.616243e-52 | -8.615850e-47 |
| Msa0789560 | Msa1108710 | 0.803273 | 3.771327e-49 | -8.615850e-47 |
| Msa0797250 | Msa1108710 | 0.810290 | 1.240776e-50 | -8.615850e-47 |
| Msa0808100 | Msa1108710 | 0.821191 | 4.602533e-53 | -8.615850e-47 |
| Msa0811040 | Msa1108710 | 0.800282 | 1.550326e-48 | -8.615850e-47 |
| Msa0822500 | Msa1108710 | 0.825400 | 4.786826e-54 | -8.615850e-47 |
| Msa0823540 | Msa1108710 | 0.848048 | 7.855390e-60 | -8.615850e-47 |
| Msa0826150 | Msa1108710 | 0.800401 | 1.466409e-48 | -8.615850e-47 |
| Msa0831850 | Msa1108710 | 0.805273 | 1.445477e-49 | -8.615850e-47 |
| Msa0832600 | Msa1108710 | 0.800958 | 1.129068e-48 | -8.615850e-47 |
| Msa0124320 | Msa1108710 | 0.804614 | 1.984900e-49 | -8.615850e-47 |
| Msa0124450 | Msa1108710 | 0.803615 | 3.203220e-49 | -8.615850e-47 |
| Msa0136630 | Msa1108710 | 0.808642 | 2.801723e-50 | -8.615850e-47 |
| Msa0138020 | Msa1108710 | 0.830077 | 3.597179e-55 | -8.615850e-47 |
| Msa0138640 | Msa1108710 | 0.809707 | 1.656275e-50 | -8.615850e-47 |
| Msa0139670 | Msa1108710 | 0.843231 | 1.591302e-58 | -8.615850e-47 |
| Msa0144530 | Msa1108710 | 0.842922 | 1.923149e-58 | -8.615850e-47 |
| Msa0152560 | Msa1108710 | 0.823546 | 1.306527e-53 | -8.615850e-47 |
| Msa0160960 | Msa1108710 | 0.850884 | 1.272146e-60 | -8.615850e-47 |
| Msa0178510 | Msa1108710 | 0.807652 | 4.553035e-50 | -8.615850e-47 |
| Msa0178570 | Msa1108710 | 0.808250 | 3.396483e-50 | -8.615850e-47 |
| Msa0183910 | Msa1108710 | 0.815635 | 8.355643e-52 | -8.615850e-47 |
| Msa0183980 | Msa1108710 | 0.807001 | 6.256407e-50 | -8.615850e-47 |
| Msa0186950 | Msa1108710 | 0.812968 | 3.245549e-51 | -8.615850e-47 |
| Msa0192640 | Msa1108710 | 0.812197 | 4.786692e-51 | -8.615850e-47 |
| Msa0196670 | Msa1108710 | 0.808609 | 2.847337e-50 | -8.615850e-47 |
| Msa0197610 | Msa1108710 | 0.809520 | 1.816574e-50 | -8.615850e-47 |
| Msa0201570 | Msa1108710 | 0.810795 | 9.651325e-51 | -8.615850e-47 |
| Msa0204960 | Msa1108710 | 0.810537 | 1.097130e-50 | -8.615850e-47 |
| Msa0206830 | Msa1108710 | 0.804485 | 2.111991e-49 | -8.615850e-47 |
| Msa0217700 | Msa1108710 | 0.820275 | 7.474806e-53 | -8.615850e-47 |
| Msa0218370 | Msa1108710 | 0.815362 | 9.609994e-52 | -8.615850e-47 |
| Msa0218460 | Msa1108710 | 0.838934 | 2.140716e-57 | -8.615850e-47 |
| Msa0220730 | Msa1108710 | 0.812516 | 4.075745e-51 | -8.615850e-47 |
| Msa0222870 | Msa1108710 | 0.801632 | 8.216032e-49 | -8.615850e-47 |
| Msa0222980 | Msa1108710 | 0.808383 | 3.182569e-50 | -8.615850e-47 |
| Msa0223330 | Msa1108710 | 0.803894 | 2.802884e-49 | -8.615850e-47 |
| Msa0233370 | Msa1108710 | 0.831178 | 1.934171e-55 | -8.615850e-47 |
| Msa0234090 | Msa1108710 | 0.800601 | 1.335348e-48 | -8.615850e-47 |
| Msa0364790 | Msa1108710 | 0.824549 | 7.600704e-54 | -8.615850e-47 |
| Msa0366210 | Msa1108710 | 0.802180 | 6.338643e-49 | -8.615850e-47 |
| Msa0369920 | Msa1108710 | 0.805941 | 1.046857e-49 | -8.615850e-47 |
| Msa0371950 | Msa1108710 | 0.841183 | 5.544307e-58 | -8.615850e-47 |
| Msa0382370 | Msa1108710 | 0.842924 | 1.921224e-58 | -8.615850e-47 |
| Msa0388730 | Msa1108710 | 0.819410 | 1.178315e-52 | -8.615850e-47 |
| Msa0389910 | Msa1108710 | 0.805887 | 1.074227e-49 | -8.615850e-47 |
| Msa0395750 | Msa1108710 | 0.800418 | 1.455104e-48 | -8.615850e-47 |
| Msa0395980 | Msa1108710 | 0.822363 | 2.465615e-53 | -8.615850e-47 |
| Msa0401560 | Msa1108710 | 0.801369 | 9.300298e-49 | -8.615850e-47 |
| Msa0403490 | Msa1108710 | 0.826962 | 2.033762e-54 | -8.615850e-47 |
| Msa0403770 | Msa1108710 | 0.820435 | 6.870398e-53 | -8.615850e-47 |
| Msa0414140 | Msa1108710 | 0.814514 | 1.482352e-51 | -8.615850e-47 |
| Msa0417330 | Msa1108710 | 0.819804 | 9.581680e-53 | -8.615850e-47 |
| Msa0422180 | Msa1108710 | 0.817602 | 3.029321e-52 | -8.615850e-47 |
| Msa0432160 | Msa1108710 | 0.850073 | 2.149197e-60 | -8.615850e-47 |
| Msa0440510 | Msa1108710 | 0.802556 | 5.303289e-49 | -8.615850e-47 |
| Msa0450400 | Msa1108710 | -0.824111 | 9.633658e-54 | -8.615850e-47 |
| Msa0450480 | Msa1108710 | 0.803576 | 3.263994e-49 | -8.615850e-47 |
| Msa0455760 | Msa1108710 | 0.815596 | 8.525982e-52 | -8.615850e-47 |
| Msa0468320 | Msa1108710 | 0.802838 | 4.638648e-49 | -8.615850e-47 |
| Msa0470880 | Msa1108710 | 0.823455 | 1.372740e-53 | -8.615850e-47 |
| Msa0472770 | Msa1108710 | 0.804283 | 2.326791e-49 | -8.615850e-47 |
| Msa0476680 | Msa1108710 | 0.855782 | 5.008423e-62 | -8.615850e-47 |
| Msa0985180 | Msa1108710 | 0.809052 | 2.289262e-50 | -8.615850e-47 |
| Msa0992580 | Msa1108710 | 0.810414 | 1.166403e-50 | -8.615850e-47 |
| Msa0992600 | Msa1108710 | 0.819125 | 1.368725e-52 | -8.615850e-47 |
| Msa0994370 | Msa1108710 | 0.820154 | 7.969358e-53 | -8.615850e-47 |
| Msa0994910 | Msa1108710 | 0.827674 | 1.373254e-54 | -8.615850e-47 |
| Msa0999680 | Msa1108710 | 0.818528 | 1.870355e-52 | -8.615850e-47 |
| Msa1011090 | Msa1108710 | 0.806965 | 6.365671e-50 | -8.615850e-47 |
| Msa1024680 | Msa1108710 | 0.903020 | 5.339066e-79 | -8.615850e-47 |
| Msa1026640 | Msa1108710 | 0.816457 | 5.477409e-52 | -8.615850e-47 |
| Msa1042660 | Msa1108710 | 0.811416 | 7.079398e-51 | -8.615850e-47 |
| Msa1048900 | Msa1108710 | 0.816063 | 6.706506e-52 | -8.615850e-47 |
| Msa1062040 | Msa1108710 | 0.814727 | 1.329764e-51 | -8.615850e-47 |
| Msa1063360 | Msa1108710 | 0.898039 | 7.839078e-77 | -8.615850e-47 |
| Msa1063400 | Msa1108710 | 0.809655 | 1.699925e-50 | -8.615850e-47 |
| Msa1063420 | Msa1108710 | 0.880237 | 6.473875e-70 | -8.615850e-47 |
| Msa1076960 | Msa1108710 | 0.812862 | 3.425004e-51 | -8.615850e-47 |
| Msa1077340 | Msa1108710 | 0.806196 | 9.251198e-50 | -8.615850e-47 |
| Msa1081790 | Msa1108710 | -0.836997 | 6.740306e-57 | -8.615850e-47 |
| Msa1082360 | Msa1108710 | 0.805454 | 1.324341e-49 | -8.615850e-47 |
| Msa1088390 | Msa1108710 | 0.802595 | 5.208331e-49 | -8.615850e-47 |
| Msa1089450 | Msa1108710 | 0.820225 | 7.673689e-53 | -8.615850e-47 |
| Msa1089460 | Msa1108710 | 0.837389 | 5.349637e-57 | -8.615850e-47 |
| Msa1096070 | Msa1108710 | 0.809391 | 1.936624e-50 | -8.615850e-47 |
| Msa1100130 | Msa1108710 | -0.802446 | 5.588685e-49 | -8.615850e-47 |
| Msa1104560 | Msa1108710 | 0.805480 | 1.308118e-49 | -8.615850e-47 |
| Msa0240270 | Msa1108710 | 0.829781 | 4.249081e-55 | -8.615850e-47 |
| Msa0240900 | Msa1108710 | 0.815059 | 1.122352e-51 | -8.615850e-47 |
| Msa0241140 | Msa1108710 | 0.836419 | 9.460871e-57 | -8.615850e-47 |
| Msa0244970 | Msa1108710 | 0.807361 | 5.247724e-50 | -8.615850e-47 |
| Msa0244980 | Msa1108710 | 0.801734 | 7.829882e-49 | -8.615850e-47 |
| Msa0269560 | Msa1108710 | 0.831451 | 1.657184e-55 | -8.615850e-47 |
| Msa0271550 | Msa1108710 | 0.833425 | 5.373761e-56 | -8.615850e-47 |
| Msa0278580 | Msa1108710 | 0.837761 | 4.295247e-57 | -8.615850e-47 |
| Msa0285330 | Msa1108710 | 0.802860 | 4.591286e-49 | -8.615850e-47 |
| Msa0295460 | Msa1108710 | -0.811233 | 7.756583e-51 | -8.615850e-47 |
| Msa0296050 | Msa1108710 | -0.818250 | 2.161803e-52 | -8.615850e-47 |
| Msa0296790 | Msa1108710 | 0.808797 | 2.595920e-50 | -8.615850e-47 |
| Msa0307310 | Msa1108710 | 0.831976 | 1.229639e-55 | -8.615850e-47 |
| Msa0308440 | Msa1108710 | 0.835899 | 1.282710e-56 | -8.615850e-47 |
| Msa0317960 | Msa1108710 | 0.839574 | 1.460826e-57 | -8.615850e-47 |
| Msa0317970 | Msa1108710 | 0.833624 | 4.792268e-56 | -8.615850e-47 |
| Msa0319290 | Msa1108710 | 0.807993 | 3.852054e-50 | -8.615850e-47 |
| Msa0321690 | Msa1108710 | 0.830103 | 3.546237e-55 | -8.615850e-47 |
| Msa0333970 | Msa1108710 | -0.826014 | 3.422383e-54 | -8.615850e-47 |
| Msa0347750 | Msa1108710 | 0.812108 | 5.005507e-51 | -8.615850e-47 |
| Msa0363790 | Msa1108710 | 0.810448 | 1.146698e-50 | -8.615850e-47 |
| Msa1107200 | Msa1108710 | 0.821370 | 4.186090e-53 | -8.615850e-47 |
| Msa1108710 | Msa1109810 | 0.823553 | 1.302239e-53 | -8.615850e-47 |
| Msa1108710 | Msa1122150 | 0.821890 | 3.174750e-53 | -8.615850e-47 |
| Msa1108710 | Msa1130400 | 0.818194 | 2.225646e-52 | -8.615850e-47 |
| Msa1108710 | Msa1137830 | 0.801530 | 8.619999e-49 | -8.615850e-47 |
| Msa1108710 | Msa1143020 | 0.821976 | 3.031932e-53 | -8.615850e-47 |
| Msa1108710 | Msa1144040 | 0.808250 | 3.396907e-50 | -8.615850e-47 |
| Msa1108710 | Msa1150780 | 0.805243 | 1.466882e-49 | -8.615850e-47 |
| Msa1108710 | Msa1152400 | 0.854095 | 1.546713e-61 | -8.615850e-47 |
| Msa1108710 | Msa1158390 | 0.815428 | 9.292906e-52 | -8.615850e-47 |
| Msa1108710 | Msa1160560 | 0.810935 | 9.001683e-51 | -8.615850e-47 |
| Msa1108710 | Msa1166090 | -0.817084 | 3.962059e-52 | -8.615850e-47 |
| Msa1108710 | Msa1175200 | 0.807437 | 5.056141e-50 | -8.615850e-47 |
| Msa1108710 | Msa1196610 | -0.807470 | 4.975283e-50 | -8.615850e-47 |
| Msa1108710 | Msa1207310 | 0.818215 | 2.202217e-52 | -8.615850e-47 |
| Msa1108710 | Msa1209190 | 0.821533 | 3.838846e-53 | -8.615850e-47 |
| Msa1108710 | Msa1212130 | 0.800838 | 1.194187e-48 | -8.615850e-47 |
| Msa1108710 | Msa1214170 | 0.822875 | 1.874752e-53 | -8.615850e-47 |
| Msa1108710 | Msa1218580 | 0.837393 | 5.338620e-57 | -8.615850e-47 |
| Msa1108710 | Msa1221330 | 0.833551 | 4.997951e-56 | -8.615850e-47 |
| Msa1108710 | Msa1229480 | 0.810543 | 1.093984e-50 | -8.615850e-47 |
| Msa1108710 | Msa1234620 | 0.834336 | 3.178906e-56 | -8.615850e-47 |
| Msa1108710 | Msa1236110 | -0.829623 | 4.641580e-55 | -8.615850e-47 |
| Msa1108710 | Msa1236440 | 0.811227 | 7.781212e-51 | -8.615850e-47 |
| Msa1108710 | Msa1243870 | 0.822715 | 2.042578e-53 | -8.615850e-47 |
| Msa1108710 | Msa1250110 | 0.804535 | 2.062247e-49 | -8.615850e-47 |
| Msa1108710 | Msa1250730 | 0.802598 | 5.198573e-49 | -8.615850e-47 |
| Msa1108710 | Msa1270660 | 0.824865 | 6.403471e-54 | -8.615850e-47 |
| Msa1108710 | Msa1270730 | 0.823213 | 1.563102e-53 | -8.615850e-47 |
| Msa1108710 | Msa1271130 | 0.805589 | 1.240928e-49 | -8.615850e-47 |
| Msa1108710 | Msa1272010 | 0.829809 | 4.181610e-55 | -8.615850e-47 |
| Msa1108710 | Msa1277670 | 0.805146 | 1.536700e-49 | -8.615850e-47 |
| Msa1108710 | Msa1280170 | 0.804357 | 2.245828e-49 | -8.615850e-47 |
| Msa1108710 | Msa1291450 | 0.825348 | 4.924402e-54 | -8.615850e-47 |
| Msa1108710 | Msa1307180 | 0.831964 | 1.238549e-55 | -8.615850e-47 |
| Msa1108710 | Msa1316360 | 0.828499 | 8.688261e-55 | -8.615850e-47 |
| Msa1108710 | Msa1325410 | -0.827075 | 1.911079e-54 | -8.615850e-47 |
| Msa1108710 | Msa1332050 | 0.829974 | 3.811793e-55 | -8.615850e-47 |
| Msa1108710 | Msa1335230 | 0.818065 | 2.380793e-52 | -8.615850e-47 |
| Msa1108710 | Msa1336040 | 0.807864 | 4.104269e-50 | -8.615850e-47 |
| Msa1108710 | Msa1346840 | 0.803943 | 2.738928e-49 | -8.615850e-47 |
| Msa1108710 | Msa1349450 | 0.802904 | 4.495902e-49 | -8.615850e-47 |
| Msa1108710 | Msa1355890 | 0.810093 | 1.368248e-50 | -8.615850e-47 |
| Msa1108710 | Msa1358070 | 0.828000 | 1.146699e-54 | -8.615850e-47 |
| Msa1108710 | Msa1359400 | 0.801006 | 1.103606e-48 | -8.615850e-47 |
| Msa1108710 | Msa1360020 | 0.821996 | 2.999262e-53 | -8.615850e-47 |
| Msa1108710 | Msa1368360 | 0.816080 | 6.650782e-52 | -8.615850e-47 |
| Msa1108710 | Msa1369920 | -0.825714 | 4.031374e-54 | -8.615850e-47 |
| Msa1108710 | Msa1370590 | 0.829929 | 3.910010e-55 | -8.615850e-47 |
| Msa1108710 | Msa1372150 | 0.809489 | 1.845087e-50 | -8.615850e-47 |
| Msa1108710 | Msa1372240 | 0.804042 | 2.612133e-49 | -8.615850e-47 |
| Msa1108710 | Msa1372280 | 0.800225 | 1.592847e-48 | -8.615850e-47 |
| Msa1108710 | Msa1378410 | 0.840379 | 9.011980e-58 | -8.615850e-47 |
| Msa1108710 | Msa1382020 | 0.803912 | 2.779271e-49 | -8.615850e-47 |
| Msa1108710 | Msa1382790 | 0.807222 | 5.617768e-50 | -8.615850e-47 |
| Msa1108710 | Msa1384100 | 0.834241 | 3.358603e-56 | -8.615850e-47 |
| Msa1108710 | Msa1386890 | 0.812170 | 4.852048e-51 | -8.615850e-47 |
| Msa1108710 | Msa1393840 | -0.820898 | 5.376852e-53 | -8.615850e-47 |
| Msa1108710 | Msa1396400 | -0.817296 | 3.550174e-52 | -8.615850e-47 |
| Msa1108710 | Msa1400930 | 0.810354 | 1.201505e-50 | -8.615850e-47 |
| Msa1108710 | Msa1401990 | 0.808299 | 3.315362e-50 | -8.615850e-47 |
| Msa1108710 | Msa1407190 | 0.819435 | 1.163332e-52 | -8.615850e-47 |
| Msa1108710 | Msa1407760 | 0.818410 | 1.989169e-52 | -8.615850e-47 |
| Msa1108710 | Msa1419840 | 0.810087 | 1.372394e-50 | -8.615850e-47 |
| Msa1108710 | Msa1423820 | 0.806764 | 7.020237e-50 | -8.615850e-47 |
| Msa1108710 | Msa1426710 | 0.823439 | 1.384369e-53 | -8.615850e-47 |
| Msa1108710 | Msa1428780 | 0.820318 | 7.306451e-53 | -8.615850e-47 |
| Msa1108710 | Msa1430130 | 0.821089 | 4.860008e-53 | -8.615850e-47 |
| Msa1108710 | Msa1430550 | 0.805216 | 1.485845e-49 | -8.615850e-47 |
| Msa1108710 | Msa1432130 | 0.817317 | 3.510697e-52 | -8.615850e-47 |
| Msa1108710 | Msa1436600 | 0.830684 | 2.556076e-55 | -8.615850e-47 |
| Msa1108710 | Msa1437270 | 0.812163 | 4.867058e-51 | -8.615850e-47 |
| Msa1108710 | Msa1437330 | 0.838518 | 2.742848e-57 | -8.615850e-47 |
| Msa1108710 | Msa1437730 | 0.842215 | 2.962540e-58 | -8.615850e-47 |
| Msa1108710 | Msa1442790 | 0.805584 | 1.243976e-49 | -8.615850e-47 |
| Msa1108710 | Msa1444120 | 0.836264 | 1.035897e-56 | -8.615850e-47 |
| Msa1108710 | Msa1446080 | 0.826074 | 3.312437e-54 | -8.615850e-47 |
| Msa1108710 | Msa1452710 | 0.803309 | 3.706773e-49 | -8.615850e-47 |
| Msa1108710 | Msa1454870 | 0.803082 | 4.130668e-49 | -8.615850e-47 |
| Msa1108710 | Msa1460750 | 0.818538 | 1.860414e-52 | -8.615850e-47 |
| Msa1108710 | Msa1462360 | 0.827245 | 1.740033e-54 | -8.615850e-47 |
| Msa0482940 | Msa1108710 | 0.835863 | 1.309603e-56 | -8.615850e-47 |
| Msa0491000 | Msa1108710 | 0.819826 | 9.473484e-53 | -8.615850e-47 |
| Msa0518170 | Msa1108710 | 0.800932 | 1.142937e-48 | -8.615850e-47 |
| Msa0521010 | Msa1108710 | 0.856899 | 2.355017e-62 | -8.615850e-47 |
| Msa0521270 | Msa1108710 | 0.803595 | 3.234446e-49 | -8.615850e-47 |
| Msa0526020 | Msa1108710 | 0.800123 | 1.670439e-48 | -8.615850e-47 |
| Msa0544160 | Msa1108710 | 0.817510 | 3.176467e-52 | -8.615850e-47 |
| Msa0545050 | Msa1108710 | 0.826643 | 2.424015e-54 | -8.615850e-47 |
| Msa0566350 | Msa1108710 | 0.833535 | 5.043419e-56 | -8.615850e-47 |
| Msa0566750 | Msa1108710 | 0.826933 | 2.066713e-54 | -8.615850e-47 |
| Msa0569780 | Msa1108710 | 0.827066 | 1.920659e-54 | -8.615850e-47 |
| Msa0581400 | Msa1108710 | 0.844093 | 9.358884e-59 | -8.615850e-47 |
| Msa0588090 | Msa1108710 | 0.809966 | 1.456973e-50 | -8.615850e-47 |
| Msa0594050 | Msa1108710 | 0.815226 | 1.030187e-51 | -8.615850e-47 |
| Msa0600080 | Msa1108710 | 0.814046 | 1.880817e-51 | -8.615850e-47 |
| Msa0600590 | Msa1108710 | 0.818806 | 1.617411e-52 | -8.615850e-47 |
| Msa0844110 | Msa1108710 | 0.811734 | 6.035851e-51 | -8.615850e-47 |
| Msa0844610 | Msa1108710 | 0.807417 | 5.107492e-50 | -8.615850e-47 |
| Msa0857940 | Msa1108710 | 0.814855 | 1.245589e-51 | -8.615850e-47 |
| Msa0862620 | Msa1108710 | 0.804223 | 2.394571e-49 | -8.615850e-47 |
| Msa0863720 | Msa1108710 | 0.833303 | 5.762359e-56 | -8.615850e-47 |
| Msa0877710 | Msa1108710 | 0.810597 | 1.065043e-50 | -8.615850e-47 |
| Msa0878220 | Msa1108710 | 0.802137 | 6.470680e-49 | -8.615850e-47 |
| Msa0880810 | Msa1108710 | 0.838979 | 2.083582e-57 | -8.615850e-47 |
| Msa0894710 | Msa1108710 | 0.831998 | 1.214248e-55 | -8.615850e-47 |
| Msa0899970 | Msa1108710 | 0.811471 | 6.885689e-51 | -8.615850e-47 |
| Msa0902830 | Msa1108710 | 0.824446 | 8.035761e-54 | -8.615850e-47 |
| Msa0921420 | Msa1108710 | 0.836094 | 1.144706e-56 | -8.615850e-47 |
| Msa0933760 | Msa1108710 | 0.801768 | 7.703211e-49 | -8.615850e-47 |
| Msa0934140 | Msa1108710 | 0.803817 | 2.908659e-49 | -8.615850e-47 |
| Msa0936390 | Msa1108710 | 0.815667 | 8.220726e-52 | -8.615850e-47 |
| Msa0943970 | Msa1108710 | 0.830352 | 3.082995e-55 | -8.615850e-47 |
| Msa0944020 | Msa1108710 | 0.808224 | 3.439491e-50 | -8.615850e-47 |
| Msa0960390 | Msa1108710 | 0.827518 | 1.497190e-54 | -8.615850e-47 |
| Msa0965080 | Msa1108710 | 0.810315 | 1.225226e-50 | -8.615850e-47 |
| Msa0965290 | Msa1108710 | 0.826232 | 3.036730e-54 | -8.615850e-47 |
| Msa0974950 | Msa1108710 | 0.801000 | 1.106665e-48 | -8.615850e-47 |
| Msa0975320 | Msa1108710 | 0.814330 | 1.627661e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108710 | MtrunA17_Chr7g0242591 | 96.949 | 295 | 6 | 3 | 1 | 294 | 1 | 293 | 0.0 | 570 |
| Msa1108710 | MtrunA17_Chr4g0006261 | 76.984 | 252 | 57 | 1 | 42 | 292 | 28 | 279 | 4.27e-119 | 343 |
| Msa1108710 | MtrunA17_Chr5g0409071 | 46.619 | 281 | 123 | 8 | 38 | 293 | 23 | 301 | 1.58e-56 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1108710 | AT5G01380.1 | 55.056 | 267 | 96 | 3 | 50 | 292 | 47 | 313 | 9.49e-75 | 232 |
| Msa1108710 | AT2G38250.1 | 57.299 | 274 | 96 | 4 | 34 | 292 | 19 | 286 | 3.91e-74 | 229 |
| Msa1108710 | AT3G25990.1 | 31.858 | 113 | 74 | 1 | 55 | 164 | 55 | 167 | 6.55e-14 | 71.6 |
| Msa1108710 | AT1G13450.3 | 33.696 | 92 | 61 | 0 | 55 | 146 | 87 | 178 | 1.17e-11 | 64.3 |
| Msa1108710 | AT1G13450.2 | 33.696 | 92 | 61 | 0 | 55 | 146 | 87 | 178 | 1.17e-11 | 64.3 |
| Msa1108710 | AT1G13450.1 | 33.696 | 92 | 61 | 0 | 55 | 146 | 87 | 178 | 2.05e-11 | 64.3 |
| Msa1108710 | AT1G13450.4 | 33.696 | 92 | 61 | 0 | 55 | 146 | 87 | 178 | 2.87e-11 | 62.8 |
Find 67 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGAAACTCCTTTGTTTCT+TGG | 0.162176 | 7_3:-51934170 | None:intergenic |
| AGAACTAGATCAAACTTTCA+TGG | 0.325286 | 7_3:+51934203 | Msa1108710:CDS |
| GCTTGAAGCTCATTGTAAAA+TGG | 0.335464 | 7_3:-51934881 | None:intergenic |
| AAACCTTGTTACTCGCTATA+AGG | 0.349897 | 7_3:+51934323 | Msa1108710:CDS |
| TGAGAGGAGATTGAAGGAGA+TGG | 0.403012 | 7_3:+51935192 | Msa1108710:CDS |
| CAAAGAGGAACAAACAGCTT+TGG | 0.409902 | 7_3:+51934229 | Msa1108710:CDS |
| AAAGAGGAACAAACAGCTTT+GGG | 0.427051 | 7_3:+51934230 | Msa1108710:CDS |
| CTCTAACACTATGAAGGAAA+AGG | 0.429380 | 7_3:+51934260 | Msa1108710:CDS |
| CAACATGCTCATAACATCAT+AGG | 0.432593 | 7_3:+51934096 | Msa1108710:CDS |
| TGGAACAAAGATGGAGAGAA+AGG | 0.438127 | 7_3:+51935260 | Msa1108710:CDS |
| GGAGATTGAAGGAGATGGAA+TGG | 0.449920 | 7_3:+51935197 | Msa1108710:CDS |
| AGAGAATGAGAGGAGATTGA+AGG | 0.459157 | 7_3:+51935186 | Msa1108710:CDS |
| GAAGGATTAGAGAGGAAGCT+AGG | 0.463838 | 7_3:+51935293 | Msa1108710:CDS |
| TCTAACACTATGAAGGAAAA+GGG | 0.470472 | 7_3:+51934261 | Msa1108710:CDS |
| ATATATGTAGGTGGAGGGTA+TGG | 0.470701 | 7_3:-51933777 | None:intergenic |
| AGATTCTTGAGGAGTTTATG+AGG | 0.475642 | 7_3:+51935116 | Msa1108710:CDS |
| TCAATGGATGGAAGCATTTG+AGG | 0.478413 | 7_3:+51935159 | Msa1108710:CDS |
| TCTGAGGATGAAGAAGAGTT+AGG | 0.481694 | 7_3:+51934983 | Msa1108710:CDS |
| GAGAATATATATGTAGGTGG+AGG | 0.485303 | 7_3:-51933783 | None:intergenic |
| AAGGAGGGTCAAAGAAGAAA+GGG | 0.488338 | 7_3:+51934948 | Msa1108710:CDS |
| GATGTTGTTGATGATGATGT+TGG | 0.490355 | 7_3:-51934017 | None:intergenic |
| AAATGCAAATGGAAGCTCAA+TGG | 0.497271 | 7_3:+51935143 | Msa1108710:CDS |
| GATGGAATGGAGACAAAGAA+TGG | 0.497428 | 7_3:+51935210 | Msa1108710:CDS |
| TATGAGGCAACAAATGCAAA+TGG | 0.498234 | 7_3:+51935132 | Msa1108710:CDS |
| GGTTAATGATGGAACAAAGA+TGG | 0.500019 | 7_3:+51935251 | Msa1108710:CDS |
| GTTAGGCAATGAAGAAAGTG+AGG | 0.500463 | 7_3:+51935000 | Msa1108710:CDS |
| GAGACAAAGAATGGAAGCAT+TGG | 0.501965 | 7_3:+51935219 | Msa1108710:CDS |
| GAAGGAGGGTCAAAGAAGAA+AGG | 0.513151 | 7_3:+51934947 | Msa1108710:CDS |
| GAGGGTATGGTGTGAACAGA+AGG | 0.514895 | 7_3:-51933764 | None:intergenic |
| AAAGGTAAAATGATAATTGG+TGG | 0.519046 | 7_3:+51935058 | Msa1108710:CDS |
| CAAGGATGCAAAGAATGCTA+TGG | 0.520600 | 7_3:+51934915 | Msa1108710:CDS |
| GAGAAAGGGAAGAACAAAGA+AGG | 0.520747 | 7_3:+51935275 | Msa1108710:CDS |
| GGAACAAAGATGGAGAGAAA+GGG | 0.522554 | 7_3:+51935261 | Msa1108710:CDS |
| TAGTGGTAGCAACAATTTGA+AGG | 0.523300 | 7_3:+51935093 | Msa1108710:CDS |
| AGTTATCTCTAACACTATGA+AGG | 0.525230 | 7_3:+51934254 | Msa1108710:CDS |
| TCACGGATAGATTTCCTCAA+TGG | 0.529342 | 7_3:+51934142 | Msa1108710:CDS |
| GGTGGAGGAAATGATAATAG+TGG | 0.531218 | 7_3:+51935076 | Msa1108710:CDS |
| TGGAAGCATTGGAGAATGAG+AGG | 0.532379 | 7_3:+51935230 | Msa1108710:CDS |
| GGAGAATGAGAGGTTAATGA+TGG | 0.535043 | 7_3:+51935240 | Msa1108710:CDS |
| TCGTGTAAGAAGAGAAGAAG+AGG | 0.537803 | 7_3:-51933896 | None:intergenic |
| GATAGGGAGAATATATATGT+AGG | 0.544448 | 7_3:-51933789 | None:intergenic |
| CAGAACAGTGCAAGTGCAAG+TGG | 0.545159 | 7_3:+51934298 | Msa1108710:CDS |
| CAATTTGAAGGAGATTCTTG+AGG | 0.551112 | 7_3:+51935105 | Msa1108710:CDS |
| GGTAAAATGATAATTGGTGG+AGG | 0.559022 | 7_3:+51935061 | Msa1108710:CDS |
| AAATGGAAATTGTTGTCTCA+TGG | 0.560448 | 7_3:-51934864 | None:intergenic |
| AAGGATTAGAGAGGAAGCTA+GGG | 0.562239 | 7_3:+51935294 | Msa1108710:CDS |
| TAGTGTTAACGTTGATGTCA+CGG | 0.564347 | 7_3:+51934125 | Msa1108710:CDS |
| AGGGAGAATATATATGTAGG+TGG | 0.567126 | 7_3:-51933786 | None:intergenic |
| GTTTCTTGGATACTCCATTG+AGG | 0.570470 | 7_3:-51934156 | None:intergenic |
| ATGCTATGGGCTGAAGCAGA+AGG | 0.573045 | 7_3:+51934929 | Msa1108710:CDS |
| AGAATATATATGTAGGTGGA+GGG | 0.578546 | 7_3:-51933782 | None:intergenic |
| GCAAATGGAAGCTCAATGGA+TGG | 0.584747 | 7_3:+51935147 | Msa1108710:CDS |
| AGAAAGTGAGGGAGATCACA+AGG | 0.594638 | 7_3:+51935012 | Msa1108710:CDS |
| TTAGGCAATGAAGAAAGTGA+GGG | 0.597635 | 7_3:+51935001 | Msa1108710:CDS |
| CTATGGGCTGAAGCAGAAGG+AGG | 0.599474 | 7_3:+51934932 | Msa1108710:CDS |
| TATAAAGGGATGTGAAACAA+TGG | 0.603946 | 7_3:+51934832 | Msa1108710:intron |
| AAACTTTCATGGAGACAAAG+AGG | 0.604350 | 7_3:+51934214 | Msa1108710:CDS |
| TTGAGGCAAGAGAGAATGAG+AGG | 0.604352 | 7_3:+51935176 | Msa1108710:CDS |
| AGAACAAAGAAGGATTAGAG+AGG | 0.604574 | 7_3:+51935285 | Msa1108710:CDS |
| ATGGAGTATCCAAGAAACAA+AGG | 0.617542 | 7_3:+51934161 | Msa1108710:CDS |
| AGGGGTGCATGTATCTTCTG+AGG | 0.631436 | 7_3:+51934967 | Msa1108710:CDS |
| AAGTTTGATCTAGTTCTGAA+CGG | 0.639250 | 7_3:-51934197 | None:intergenic |
| AAGGATGCAAAGAATGCTAT+GGG | 0.642173 | 7_3:+51934916 | Msa1108710:CDS |
| GTACCTTATAGCGAGTAACA+AGG | 0.656453 | 7_3:-51934326 | None:intergenic |
| AGGAGGGTCAAAGAAGAAAG+GGG | 0.670389 | 7_3:+51934949 | Msa1108710:CDS |
| TATGGGCTGAAGCAGAAGGA+GGG | 0.673793 | 7_3:+51934933 | Msa1108710:CDS |
| GAAAGTGAGGGAGATCACAA+GGG | 0.730407 | 7_3:+51935013 | Msa1108710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGTTAAACTTTTTTTT+TGG | + | chr7_3:51934536-51934555 | Msa1108710:intron | 10.0% |
| !!! | ATTTTGTTAAACTTTTTTTT+TGG | + | chr7_3:51934536-51934555 | Msa1108710:intron | 10.0% |
| !! | TAAAAAAAAACAAAAGCAAA+AGG | - | chr7_3:51933970-51933989 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTCAACTTCAA+TGG | + | chr7_3:51933981-51934000 | Msa1108710:exon | 15.0% |
| !! | TACATAGAATTATTAATGAT+TGG | - | chr7_3:51934399-51934418 | None:intergenic | 15.0% |
| !!! | TTTATGTTTTTGTGATATAA+AGG | + | chr7_3:51934817-51934836 | Msa1108710:intron | 15.0% |
| !!! | TTATGTTTTTGTGATATAAA+GGG | + | chr7_3:51934818-51934837 | Msa1108710:intron | 15.0% |
| !! | ATTAAAAAGAAGAAGAAAAA+AGG | + | chr7_3:51935040-51935059 | Msa1108710:CDS | 15.0% |
| !! | AAAAAAGGTAAAATGATAAT+TGG | + | chr7_3:51935055-51935074 | Msa1108710:CDS | 15.0% |
| !! | TAAAAAAAAACAAAAGCAAA+AGG | - | chr7_3:51933970-51933989 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTCAACTTCAA+TGG | + | chr7_3:51933981-51934000 | Msa1108710:exon | 15.0% |
| !! | TACATAGAATTATTAATGAT+TGG | - | chr7_3:51934399-51934418 | None:intergenic | 15.0% |
| !!! | TTTATGTTTTTGTGATATAA+AGG | + | chr7_3:51934817-51934836 | Msa1108710:intron | 15.0% |
| !!! | TTATGTTTTTGTGATATAAA+GGG | + | chr7_3:51934818-51934837 | Msa1108710:intron | 15.0% |
| !! | ATTAAAAAGAAGAAGAAAAA+AGG | + | chr7_3:51935040-51935059 | Msa1108710:CDS | 15.0% |
| !! | AAAAAAGGTAAAATGATAAT+TGG | + | chr7_3:51935055-51935074 | Msa1108710:CDS | 15.0% |
| !! | AAACAAGAATGATTTATGAT+TGG | - | chr7_3:51934458-51934477 | None:intergenic | 20.0% |
| !! | AAAAGGCAATAAATAAAAAG+TGG | - | chr7_3:51934614-51934633 | None:intergenic | 20.0% |
| !! | AAACAAGAATGATTTATGAT+TGG | - | chr7_3:51934458-51934477 | None:intergenic | 20.0% |
| !! | AAAAGGCAATAAATAAAAAG+TGG | - | chr7_3:51934614-51934633 | None:intergenic | 20.0% |
| !!! | AGAAAAAGTTTTGGTGATTT+TGG | - | chr7_3:51933871-51933890 | None:intergenic | 25.0% |
| !! | TTTTTATTCAACTTCAATGG+AGG | + | chr7_3:51933984-51934003 | Msa1108710:exon | 25.0% |
| !! | TTTTATTCAACTTCAATGGA+GGG | + | chr7_3:51933985-51934004 | Msa1108710:exon | 25.0% |
| !!! | GTTAAACTTTTTTTTTGGAC+AGG | + | chr7_3:51934541-51934560 | Msa1108710:intron | 25.0% |
| !!! | TATTGCCTTTTCAATTTGTT+AGG | + | chr7_3:51934623-51934642 | Msa1108710:intron | 25.0% |
| !!! | ATTGCCTTTTCAATTTGTTA+GGG | + | chr7_3:51934624-51934643 | Msa1108710:intron | 25.0% |
| !! | TTTATATTGTGAGCTTTTCA+TGG | + | chr7_3:51934753-51934772 | Msa1108710:intron | 25.0% |
| ! | AAAGGTAAAATGATAATTGG+TGG | + | chr7_3:51935058-51935077 | Msa1108710:CDS | 25.0% |
| !!! | AGAAAAAGTTTTGGTGATTT+TGG | - | chr7_3:51933871-51933890 | None:intergenic | 25.0% |
| !! | TTTTTATTCAACTTCAATGG+AGG | + | chr7_3:51933984-51934003 | Msa1108710:exon | 25.0% |
| !! | TTTTATTCAACTTCAATGGA+GGG | + | chr7_3:51933985-51934004 | Msa1108710:exon | 25.0% |
| !!! | GTTAAACTTTTTTTTTGGAC+AGG | + | chr7_3:51934541-51934560 | Msa1108710:intron | 25.0% |
| !!! | TATTGCCTTTTCAATTTGTT+AGG | + | chr7_3:51934623-51934642 | Msa1108710:intron | 25.0% |
| !!! | ATTGCCTTTTCAATTTGTTA+GGG | + | chr7_3:51934624-51934643 | Msa1108710:intron | 25.0% |
| !! | TTTATATTGTGAGCTTTTCA+TGG | + | chr7_3:51934753-51934772 | Msa1108710:intron | 25.0% |
| ! | AAAGGTAAAATGATAATTGG+TGG | + | chr7_3:51935058-51935077 | Msa1108710:CDS | 25.0% |
| AGAATATATATGTAGGTGGA+GGG | - | chr7_3:51933785-51933804 | None:intergenic | 30.0% | |
| GATAGGGAGAATATATATGT+AGG | - | chr7_3:51933792-51933811 | None:intergenic | 30.0% | |
| AGATGAGAGAGAAAAAGATA+GGG | - | chr7_3:51933808-51933827 | None:intergenic | 30.0% | |
| AAGATGAGAGAGAAAAAGAT+AGG | - | chr7_3:51933809-51933828 | None:intergenic | 30.0% | |
| !!! | AGTTTTGGTGATTTTGGTTA+TGG | - | chr7_3:51933865-51933884 | None:intergenic | 30.0% |
| ! | GAGGCTTATAGAAAAAGTTT+TGG | - | chr7_3:51933880-51933899 | None:intergenic | 30.0% |
| ! | TAAGAAACTCCTTTGTTTCT+TGG | - | chr7_3:51934173-51934192 | None:intergenic | 30.0% |
| !! | AAGTTTGATCTAGTTCTGAA+CGG | - | chr7_3:51934200-51934219 | None:intergenic | 30.0% |
| AGAACTAGATCAAACTTTCA+TGG | + | chr7_3:51934203-51934222 | Msa1108710:CDS | 30.0% | |
| AGTTATCTCTAACACTATGA+AGG | + | chr7_3:51934254-51934273 | Msa1108710:CDS | 30.0% | |
| TCTAACACTATGAAGGAAAA+GGG | + | chr7_3:51934261-51934280 | Msa1108710:CDS | 30.0% | |
| !!! | TTGCCTTTTCAATTTGTTAG+GGG | + | chr7_3:51934625-51934644 | Msa1108710:intron | 30.0% |
| ! | TTTTCTCTCTCATGAATCAA+AGG | + | chr7_3:51934654-51934673 | Msa1108710:intron | 30.0% |
| TTTCTCTCTCATGAATCAAA+GGG | + | chr7_3:51934655-51934674 | Msa1108710:intron | 30.0% | |
| TATAAAGGGATGTGAAACAA+TGG | + | chr7_3:51934832-51934851 | Msa1108710:intron | 30.0% | |
| AAATGGAAATTGTTGTCTCA+TGG | - | chr7_3:51934867-51934886 | None:intergenic | 30.0% | |
| !!! | TTCAAGCTATTTTTAGTGCA+AGG | + | chr7_3:51934897-51934916 | Msa1108710:CDS | 30.0% |
| AGAATATATATGTAGGTGGA+GGG | - | chr7_3:51933785-51933804 | None:intergenic | 30.0% | |
| GATAGGGAGAATATATATGT+AGG | - | chr7_3:51933792-51933811 | None:intergenic | 30.0% | |
| AGATGAGAGAGAAAAAGATA+GGG | - | chr7_3:51933808-51933827 | None:intergenic | 30.0% | |
| AAGATGAGAGAGAAAAAGAT+AGG | - | chr7_3:51933809-51933828 | None:intergenic | 30.0% | |
| !!! | AGTTTTGGTGATTTTGGTTA+TGG | - | chr7_3:51933865-51933884 | None:intergenic | 30.0% |
| ! | GAGGCTTATAGAAAAAGTTT+TGG | - | chr7_3:51933880-51933899 | None:intergenic | 30.0% |
| ! | TAAGAAACTCCTTTGTTTCT+TGG | - | chr7_3:51934173-51934192 | None:intergenic | 30.0% |
| !! | AAGTTTGATCTAGTTCTGAA+CGG | - | chr7_3:51934200-51934219 | None:intergenic | 30.0% |
| AGAACTAGATCAAACTTTCA+TGG | + | chr7_3:51934203-51934222 | Msa1108710:CDS | 30.0% | |
| AGTTATCTCTAACACTATGA+AGG | + | chr7_3:51934254-51934273 | Msa1108710:CDS | 30.0% | |
| TCTAACACTATGAAGGAAAA+GGG | + | chr7_3:51934261-51934280 | Msa1108710:CDS | 30.0% | |
| !!! | TTGCCTTTTCAATTTGTTAG+GGG | + | chr7_3:51934625-51934644 | Msa1108710:intron | 30.0% |
| ! | TTTTCTCTCTCATGAATCAA+AGG | + | chr7_3:51934654-51934673 | Msa1108710:intron | 30.0% |
| TTTCTCTCTCATGAATCAAA+GGG | + | chr7_3:51934655-51934674 | Msa1108710:intron | 30.0% | |
| TATAAAGGGATGTGAAACAA+TGG | + | chr7_3:51934832-51934851 | Msa1108710:intron | 30.0% | |
| AAATGGAAATTGTTGTCTCA+TGG | - | chr7_3:51934867-51934886 | None:intergenic | 30.0% | |
| !!! | TTCAAGCTATTTTTAGTGCA+AGG | + | chr7_3:51934897-51934916 | Msa1108710:CDS | 30.0% |
| GAGAATATATATGTAGGTGG+AGG | - | chr7_3:51933786-51933805 | None:intergenic | 35.0% | |
| AGGGAGAATATATATGTAGG+TGG | - | chr7_3:51933789-51933808 | None:intergenic | 35.0% | |
| !!! | TTTGGTGATTTTGGTTATGG+AGG | - | chr7_3:51933862-51933881 | None:intergenic | 35.0% |
| !! | GATGTTGTTGATGATGATGT+TGG | - | chr7_3:51934020-51934039 | None:intergenic | 35.0% |
| CAACATGCTCATAACATCAT+AGG | + | chr7_3:51934096-51934115 | Msa1108710:CDS | 35.0% | |
| TAGTGTTAACGTTGATGTCA+CGG | + | chr7_3:51934125-51934144 | Msa1108710:CDS | 35.0% | |
| ! | ATGGAGTATCCAAGAAACAA+AGG | + | chr7_3:51934161-51934180 | Msa1108710:CDS | 35.0% |
| AAACTTTCATGGAGACAAAG+AGG | + | chr7_3:51934214-51934233 | Msa1108710:CDS | 35.0% | |
| AAAGAGGAACAAACAGCTTT+GGG | + | chr7_3:51934230-51934249 | Msa1108710:CDS | 35.0% | |
| CTCTAACACTATGAAGGAAA+AGG | + | chr7_3:51934260-51934279 | Msa1108710:CDS | 35.0% | |
| AAACCTTGTTACTCGCTATA+AGG | + | chr7_3:51934323-51934342 | Msa1108710:CDS | 35.0% | |
| !!! | TGCCTTTTCAATTTGTTAGG+GGG | + | chr7_3:51934626-51934645 | Msa1108710:intron | 35.0% |
| TACCCCCTAACAAATTGAAA+AGG | - | chr7_3:51934631-51934650 | None:intergenic | 35.0% | |
| GCTTGAAGCTCATTGTAAAA+TGG | - | chr7_3:51934884-51934903 | None:intergenic | 35.0% | |
| AAGGATGCAAAGAATGCTAT+GGG | + | chr7_3:51934916-51934935 | Msa1108710:CDS | 35.0% | |
| TTAGGCAATGAAGAAAGTGA+GGG | + | chr7_3:51935001-51935020 | Msa1108710:CDS | 35.0% | |
| GGTAAAATGATAATTGGTGG+AGG | + | chr7_3:51935061-51935080 | Msa1108710:CDS | 35.0% | |
| TAGTGGTAGCAACAATTTGA+AGG | + | chr7_3:51935093-51935112 | Msa1108710:CDS | 35.0% | |
| CAATTTGAAGGAGATTCTTG+AGG | + | chr7_3:51935105-51935124 | Msa1108710:CDS | 35.0% | |
| AGATTCTTGAGGAGTTTATG+AGG | + | chr7_3:51935116-51935135 | Msa1108710:CDS | 35.0% | |
| TATGAGGCAACAAATGCAAA+TGG | + | chr7_3:51935132-51935151 | Msa1108710:CDS | 35.0% | |
| AAATGCAAATGGAAGCTCAA+TGG | + | chr7_3:51935143-51935162 | Msa1108710:CDS | 35.0% | |
| ! | GGTTAATGATGGAACAAAGA+TGG | + | chr7_3:51935251-51935270 | Msa1108710:CDS | 35.0% |
| AGAACAAAGAAGGATTAGAG+AGG | + | chr7_3:51935285-51935304 | Msa1108710:CDS | 35.0% | |
| GAGAATATATATGTAGGTGG+AGG | - | chr7_3:51933786-51933805 | None:intergenic | 35.0% | |
| AGGGAGAATATATATGTAGG+TGG | - | chr7_3:51933789-51933808 | None:intergenic | 35.0% | |
| !!! | TTTGGTGATTTTGGTTATGG+AGG | - | chr7_3:51933862-51933881 | None:intergenic | 35.0% |
| !! | GATGTTGTTGATGATGATGT+TGG | - | chr7_3:51934020-51934039 | None:intergenic | 35.0% |
| CAACATGCTCATAACATCAT+AGG | + | chr7_3:51934096-51934115 | Msa1108710:CDS | 35.0% | |
| TAGTGTTAACGTTGATGTCA+CGG | + | chr7_3:51934125-51934144 | Msa1108710:CDS | 35.0% | |
| ! | ATGGAGTATCCAAGAAACAA+AGG | + | chr7_3:51934161-51934180 | Msa1108710:CDS | 35.0% |
| AAACTTTCATGGAGACAAAG+AGG | + | chr7_3:51934214-51934233 | Msa1108710:CDS | 35.0% | |
| AAAGAGGAACAAACAGCTTT+GGG | + | chr7_3:51934230-51934249 | Msa1108710:CDS | 35.0% | |
| CTCTAACACTATGAAGGAAA+AGG | + | chr7_3:51934260-51934279 | Msa1108710:CDS | 35.0% | |
| AAACCTTGTTACTCGCTATA+AGG | + | chr7_3:51934323-51934342 | Msa1108710:CDS | 35.0% | |
| !!! | TGCCTTTTCAATTTGTTAGG+GGG | + | chr7_3:51934626-51934645 | Msa1108710:intron | 35.0% |
| TACCCCCTAACAAATTGAAA+AGG | - | chr7_3:51934631-51934650 | None:intergenic | 35.0% | |
| GCTTGAAGCTCATTGTAAAA+TGG | - | chr7_3:51934884-51934903 | None:intergenic | 35.0% | |
| AAGGATGCAAAGAATGCTAT+GGG | + | chr7_3:51934916-51934935 | Msa1108710:CDS | 35.0% | |
| TTAGGCAATGAAGAAAGTGA+GGG | + | chr7_3:51935001-51935020 | Msa1108710:CDS | 35.0% | |
| GGTAAAATGATAATTGGTGG+AGG | + | chr7_3:51935061-51935080 | Msa1108710:CDS | 35.0% | |
| TAGTGGTAGCAACAATTTGA+AGG | + | chr7_3:51935093-51935112 | Msa1108710:CDS | 35.0% | |
| CAATTTGAAGGAGATTCTTG+AGG | + | chr7_3:51935105-51935124 | Msa1108710:CDS | 35.0% | |
| AGATTCTTGAGGAGTTTATG+AGG | + | chr7_3:51935116-51935135 | Msa1108710:CDS | 35.0% | |
| TATGAGGCAACAAATGCAAA+TGG | + | chr7_3:51935132-51935151 | Msa1108710:CDS | 35.0% | |
| AAATGCAAATGGAAGCTCAA+TGG | + | chr7_3:51935143-51935162 | Msa1108710:CDS | 35.0% | |
| ! | GGTTAATGATGGAACAAAGA+TGG | + | chr7_3:51935251-51935270 | Msa1108710:CDS | 35.0% |
| AGAACAAAGAAGGATTAGAG+AGG | + | chr7_3:51935285-51935304 | Msa1108710:CDS | 35.0% | |
| ATATATGTAGGTGGAGGGTA+TGG | - | chr7_3:51933780-51933799 | None:intergenic | 40.0% | |
| !!! | GTGATTTTGGTTATGGAGGA+GGG | - | chr7_3:51933858-51933877 | None:intergenic | 40.0% |
| TCGTGTAAGAAGAGAAGAAG+AGG | - | chr7_3:51933899-51933918 | None:intergenic | 40.0% | |
| TCACGGATAGATTTCCTCAA+TGG | + | chr7_3:51934142-51934161 | Msa1108710:CDS | 40.0% | |
| GTTTCTTGGATACTCCATTG+AGG | - | chr7_3:51934159-51934178 | None:intergenic | 40.0% | |
| CAAAGAGGAACAAACAGCTT+TGG | + | chr7_3:51934229-51934248 | Msa1108710:CDS | 40.0% | |
| GTACCTTATAGCGAGTAACA+AGG | - | chr7_3:51934329-51934348 | None:intergenic | 40.0% | |
| CAAGGATGCAAAGAATGCTA+TGG | + | chr7_3:51934915-51934934 | Msa1108710:CDS | 40.0% | |
| AAGGAGGGTCAAAGAAGAAA+GGG | + | chr7_3:51934948-51934967 | Msa1108710:CDS | 40.0% | |
| TCTGAGGATGAAGAAGAGTT+AGG | + | chr7_3:51934983-51935002 | Msa1108710:CDS | 40.0% | |
| GTTAGGCAATGAAGAAAGTG+AGG | + | chr7_3:51935000-51935019 | Msa1108710:CDS | 40.0% | |
| GGTGGAGGAAATGATAATAG+TGG | + | chr7_3:51935076-51935095 | Msa1108710:CDS | 40.0% | |
| !! | TCAATGGATGGAAGCATTTG+AGG | + | chr7_3:51935159-51935178 | Msa1108710:CDS | 40.0% |
| AGAGAATGAGAGGAGATTGA+AGG | + | chr7_3:51935186-51935205 | Msa1108710:CDS | 40.0% | |
| GATGGAATGGAGACAAAGAA+TGG | + | chr7_3:51935210-51935229 | Msa1108710:CDS | 40.0% | |
| ! | GAGACAAAGAATGGAAGCAT+TGG | + | chr7_3:51935219-51935238 | Msa1108710:CDS | 40.0% |
| GGAGAATGAGAGGTTAATGA+TGG | + | chr7_3:51935240-51935259 | Msa1108710:CDS | 40.0% | |
| TGGAACAAAGATGGAGAGAA+AGG | + | chr7_3:51935260-51935279 | Msa1108710:CDS | 40.0% | |
| GGAACAAAGATGGAGAGAAA+GGG | + | chr7_3:51935261-51935280 | Msa1108710:CDS | 40.0% | |
| GAGAAAGGGAAGAACAAAGA+AGG | + | chr7_3:51935275-51935294 | Msa1108710:CDS | 40.0% | |
| AAGGATTAGAGAGGAAGCTA+GGG | + | chr7_3:51935294-51935313 | Msa1108710:CDS | 40.0% | |
| GCTTACAAGAGAAGACATGT+AGG | + | chr7_3:51935357-51935376 | Msa1108710:CDS | 40.0% | |
| ATATATGTAGGTGGAGGGTA+TGG | - | chr7_3:51933780-51933799 | None:intergenic | 40.0% | |
| !!! | GTGATTTTGGTTATGGAGGA+GGG | - | chr7_3:51933858-51933877 | None:intergenic | 40.0% |
| TCGTGTAAGAAGAGAAGAAG+AGG | - | chr7_3:51933899-51933918 | None:intergenic | 40.0% | |
| TCACGGATAGATTTCCTCAA+TGG | + | chr7_3:51934142-51934161 | Msa1108710:CDS | 40.0% | |
| GTTTCTTGGATACTCCATTG+AGG | - | chr7_3:51934159-51934178 | None:intergenic | 40.0% | |
| CAAAGAGGAACAAACAGCTT+TGG | + | chr7_3:51934229-51934248 | Msa1108710:CDS | 40.0% | |
| GTACCTTATAGCGAGTAACA+AGG | - | chr7_3:51934329-51934348 | None:intergenic | 40.0% | |
| CAAGGATGCAAAGAATGCTA+TGG | + | chr7_3:51934915-51934934 | Msa1108710:CDS | 40.0% | |
| AAGGAGGGTCAAAGAAGAAA+GGG | + | chr7_3:51934948-51934967 | Msa1108710:CDS | 40.0% | |
| TCTGAGGATGAAGAAGAGTT+AGG | + | chr7_3:51934983-51935002 | Msa1108710:CDS | 40.0% | |
| GTTAGGCAATGAAGAAAGTG+AGG | + | chr7_3:51935000-51935019 | Msa1108710:CDS | 40.0% | |
| GGTGGAGGAAATGATAATAG+TGG | + | chr7_3:51935076-51935095 | Msa1108710:CDS | 40.0% | |
| !! | TCAATGGATGGAAGCATTTG+AGG | + | chr7_3:51935159-51935178 | Msa1108710:CDS | 40.0% |
| AGAGAATGAGAGGAGATTGA+AGG | + | chr7_3:51935186-51935205 | Msa1108710:CDS | 40.0% | |
| GATGGAATGGAGACAAAGAA+TGG | + | chr7_3:51935210-51935229 | Msa1108710:CDS | 40.0% | |
| ! | GAGACAAAGAATGGAAGCAT+TGG | + | chr7_3:51935219-51935238 | Msa1108710:CDS | 40.0% |
| GGAGAATGAGAGGTTAATGA+TGG | + | chr7_3:51935240-51935259 | Msa1108710:CDS | 40.0% | |
| TGGAACAAAGATGGAGAGAA+AGG | + | chr7_3:51935260-51935279 | Msa1108710:CDS | 40.0% | |
| GGAACAAAGATGGAGAGAAA+GGG | + | chr7_3:51935261-51935280 | Msa1108710:CDS | 40.0% | |
| GAGAAAGGGAAGAACAAAGA+AGG | + | chr7_3:51935275-51935294 | Msa1108710:CDS | 40.0% | |
| AAGGATTAGAGAGGAAGCTA+GGG | + | chr7_3:51935294-51935313 | Msa1108710:CDS | 40.0% | |
| !!! | GGTGATTTTGGTTATGGAGG+AGG | - | chr7_3:51933859-51933878 | None:intergenic | 45.0% |
| GAAGGAGGGTCAAAGAAGAA+AGG | + | chr7_3:51934947-51934966 | Msa1108710:CDS | 45.0% | |
| AGGAGGGTCAAAGAAGAAAG+GGG | + | chr7_3:51934949-51934968 | Msa1108710:CDS | 45.0% | |
| AGAAAGTGAGGGAGATCACA+AGG | + | chr7_3:51935012-51935031 | Msa1108710:CDS | 45.0% | |
| GAAAGTGAGGGAGATCACAA+GGG | + | chr7_3:51935013-51935032 | Msa1108710:CDS | 45.0% | |
| GCAAATGGAAGCTCAATGGA+TGG | + | chr7_3:51935147-51935166 | Msa1108710:CDS | 45.0% | |
| TTGAGGCAAGAGAGAATGAG+AGG | + | chr7_3:51935176-51935195 | Msa1108710:CDS | 45.0% | |
| TGAGAGGAGATTGAAGGAGA+TGG | + | chr7_3:51935192-51935211 | Msa1108710:CDS | 45.0% | |
| GGAGATTGAAGGAGATGGAA+TGG | + | chr7_3:51935197-51935216 | Msa1108710:CDS | 45.0% | |
| !! | TGGAAGCATTGGAGAATGAG+AGG | + | chr7_3:51935230-51935249 | Msa1108710:CDS | 45.0% |
| GAAGGATTAGAGAGGAAGCT+AGG | + | chr7_3:51935293-51935312 | Msa1108710:CDS | 45.0% | |
| !!! | GGTGATTTTGGTTATGGAGG+AGG | - | chr7_3:51933859-51933878 | None:intergenic | 45.0% |
| GAAGGAGGGTCAAAGAAGAA+AGG | + | chr7_3:51934947-51934966 | Msa1108710:CDS | 45.0% | |
| AGGAGGGTCAAAGAAGAAAG+GGG | + | chr7_3:51934949-51934968 | Msa1108710:CDS | 45.0% | |
| AGAAAGTGAGGGAGATCACA+AGG | + | chr7_3:51935012-51935031 | Msa1108710:CDS | 45.0% | |
| GAAAGTGAGGGAGATCACAA+GGG | + | chr7_3:51935013-51935032 | Msa1108710:CDS | 45.0% | |
| GCAAATGGAAGCTCAATGGA+TGG | + | chr7_3:51935147-51935166 | Msa1108710:CDS | 45.0% | |
| TTGAGGCAAGAGAGAATGAG+AGG | + | chr7_3:51935176-51935195 | Msa1108710:CDS | 45.0% | |
| TGAGAGGAGATTGAAGGAGA+TGG | + | chr7_3:51935192-51935211 | Msa1108710:CDS | 45.0% | |
| GGAGATTGAAGGAGATGGAA+TGG | + | chr7_3:51935197-51935216 | Msa1108710:CDS | 45.0% | |
| !! | TGGAAGCATTGGAGAATGAG+AGG | + | chr7_3:51935230-51935249 | Msa1108710:CDS | 45.0% |
| GAAGGATTAGAGAGGAAGCT+AGG | + | chr7_3:51935293-51935312 | Msa1108710:CDS | 45.0% | |
| ! | GAGGGTATGGTGTGAACAGA+AGG | - | chr7_3:51933767-51933786 | None:intergenic | 50.0% |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr7_3:51933834-51933853 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr7_3:51933833-51933852 | None:intergenic | 50.0% | |
| CAGAACAGTGCAAGTGCAAG+TGG | + | chr7_3:51934298-51934317 | Msa1108710:CDS | 50.0% | |
| ! | ATGCTATGGGCTGAAGCAGA+AGG | + | chr7_3:51934929-51934948 | Msa1108710:CDS | 50.0% |
| ! | TATGGGCTGAAGCAGAAGGA+GGG | + | chr7_3:51934933-51934952 | Msa1108710:CDS | 50.0% |
| ! | AGGGGTGCATGTATCTTCTG+AGG | + | chr7_3:51934967-51934986 | Msa1108710:CDS | 50.0% |
| ! | GAGGGTATGGTGTGAACAGA+AGG | - | chr7_3:51933767-51933786 | None:intergenic | 50.0% |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr7_3:51933834-51933853 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr7_3:51933833-51933852 | None:intergenic | 50.0% | |
| CAGAACAGTGCAAGTGCAAG+TGG | + | chr7_3:51934298-51934317 | Msa1108710:CDS | 50.0% | |
| ! | ATGCTATGGGCTGAAGCAGA+AGG | + | chr7_3:51934929-51934948 | Msa1108710:CDS | 50.0% |
| ! | TATGGGCTGAAGCAGAAGGA+GGG | + | chr7_3:51934933-51934952 | Msa1108710:CDS | 50.0% |
| ! | AGGGGTGCATGTATCTTCTG+AGG | + | chr7_3:51934967-51934986 | Msa1108710:CDS | 50.0% |
| ! | CTATGGGCTGAAGCAGAAGG+AGG | + | chr7_3:51934932-51934951 | Msa1108710:CDS | 55.0% |
| ! | CTATGGGCTGAAGCAGAAGG+AGG | + | chr7_3:51934932-51934951 | Msa1108710:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 51933754 | 51935378 | 51933754 | ID=Msa1108710;Name=Msa1108710 |
| chr7_3 | mRNA | 51933754 | 51935378 | 51933754 | ID=Msa1108710-mRNA-1;Parent=Msa1108710;Name=Msa1108710-mRNA-1;_AED=0.03;_eAED=0.03;_QI=246|1|0.5|1|1|1|2|0|294 |
| chr7_3 | exon | 51933754 | 51934344 | 51933754 | ID=Msa1108710-mRNA-1:exon:10720;Parent=Msa1108710-mRNA-1 |
| chr7_3 | exon | 51934839 | 51935378 | 51934839 | ID=Msa1108710-mRNA-1:exon:10721;Parent=Msa1108710-mRNA-1 |
| chr7_3 | five_prime_UTR | 51933754 | 51933999 | 51933754 | ID=Msa1108710-mRNA-1:five_prime_utr;Parent=Msa1108710-mRNA-1 |
| chr7_3 | CDS | 51934000 | 51934344 | 51934000 | ID=Msa1108710-mRNA-1:cds;Parent=Msa1108710-mRNA-1 |
| chr7_3 | CDS | 51934839 | 51935378 | 51934839 | ID=Msa1108710-mRNA-1:cds;Parent=Msa1108710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
