AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0047940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0047940 MtrunA17_Chr2g0322461 94.271 192 11 0 1 192 1 192 3.17e-132 375
Msa0047940 MtrunA17_Chr4g0074991 66.412 131 44 0 62 192 80 210 1.89e-59 190
Msa0047940 MtrunA17_Chr2g0320971 51.667 180 83 2 13 192 62 237 2.28e-55 181
Msa0047940 MtrunA17_Chr4g0027131 63.115 122 45 0 71 192 103 224 4.93e-52 172
Msa0047940 MtrunA17_Chr4g0030101 56.028 141 58 1 52 192 58 194 7.47e-49 162
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0047940 AT1G11790.2 63.910 133 48 0 60 192 77 209 3.47e-57 183
Msa0047940 AT1G11790.1 63.910 133 48 0 60 192 77 209 2.25e-56 182
Msa0047940 AT2G27820.1 65.289 121 42 0 72 192 104 224 1.96e-53 176
Msa0047940 AT1G08250.1 64.463 121 43 0 72 192 99 219 3.17e-53 175
Msa0047940 AT3G44720.1 59.504 121 49 0 72 192 108 228 9.02e-49 164
Msa0047940 AT5G22630.1 57.364 129 55 0 64 192 101 229 1.39e-48 163
Msa0047940 AT3G07630.3 59.350 123 50 0 70 192 80 202 2.47e-46 156
Msa0047940 AT3G07630.2 59.350 123 50 0 70 192 80 202 2.47e-46 156
Msa0047940 AT3G07630.1 59.350 123 50 0 70 192 80 202 2.47e-46 156

Find 47 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAGATTGTTTCACAATT+AGG 0.168545 1_1:+81136763 None:intergenic
AATGACTTAAAACACGTTTA+AGG 0.216795 1_1:+81136422 None:intergenic
GAAGTGTGAGAAATGGAAAA+AGG 0.275828 1_1:+81138607 None:intergenic
ATGAGATTGTTTCACAATTA+GGG 0.284913 1_1:+81136764 None:intergenic
TTATGGATTGCATAAAGATT+TGG 0.308001 1_1:-81138329 Msa0047940:CDS
ATGATTTACTTCTTCGTCAT+AGG 0.356110 1_1:-81136519 Msa0047940:CDS
TGCCATAGCCATGGAGATTA+AGG 0.362109 1_1:+81138519 None:intergenic
AGTGGTGGTGATGTCTCTTA+TGG 0.365055 1_1:-81138346 Msa0047940:CDS
CGTCATAGGCTTCACATTGT+TGG 0.374885 1_1:-81136505 Msa0047940:CDS
GCAATATCAGATATGGATAA+TGG 0.377891 1_1:+81136960 None:intergenic
CAAAGTACGAATATCATATC+AGG 0.382928 1_1:-81136916 Msa0047940:intron
GAAATTTGAAGTGTGAGAAA+TGG 0.397479 1_1:+81138600 None:intergenic
AGCTGCCGCAATATCAGATA+TGG 0.398548 1_1:+81136953 None:intergenic
CTGATATGATATTCGTACTT+TGG 0.430254 1_1:+81136917 None:intergenic
CTCTCCCTCCTAGCTATGCC+TGG 0.432761 1_1:-81136460 Msa0047940:CDS
ATGGCATCTCTTGTTGTACC+AGG 0.445664 1_1:-81138502 Msa0047940:CDS
AACCACATGCATCATTATCT+TGG 0.447822 1_1:+81138393 None:intergenic
ATTCCAATTGAAAATACATC+TGG 0.458943 1_1:-81136562 Msa0047940:CDS
ACAGGCTGTTGAGTTGTGGC+TGG 0.462106 1_1:-81136599 Msa0047940:intron
GAAGAAGTAAATCATAGTTC+CGG 0.473021 1_1:+81136527 None:intergenic
CATTGTTGGCGAGGTGCAGT+TGG 0.503801 1_1:-81136491 Msa0047940:CDS
CAGGCATAGCTAGGAGGGAG+AGG 0.512484 1_1:+81136461 None:intergenic
GACCTTAATCTCCATGGCTA+TGG 0.523993 1_1:-81138521 Msa0047940:exon
GCATCCTCGCTGTATGATCC+TGG 0.526215 1_1:+81136802 None:intergenic
ATCATTGACCTTAATCTCCA+TGG 0.536471 1_1:-81138527 Msa0047940:exon
CATCTGGTGGAAGCATTCAC+CGG 0.538869 1_1:-81136546 Msa0047940:CDS
TTCTGACACCAGGCATAGCT+AGG 0.539323 1_1:+81136452 None:intergenic
CCAATTGAAAATACATCTGG+TGG 0.545574 1_1:-81136559 Msa0047940:CDS
AATCAAAGTCAAGTGGGTAG+TGG 0.552304 1_1:-81138364 Msa0047940:CDS
GATGAAACTACCCACTTGGA+AGG 0.553676 1_1:+81138302 None:intergenic
GACACCAGGCATAGCTAGGA+GGG 0.564157 1_1:+81136456 None:intergenic
AGTTGAGAACTTGAGAGCCC+TGG 0.572583 1_1:+81138484 None:intergenic
TTACTGATTTAGGGGATACC+AGG 0.572631 1_1:-81136820 Msa0047940:intron
AACAAGAGATGCCATAGCCA+TGG 0.584871 1_1:+81138510 None:intergenic
CAAAGTCAAGTGGGTAGTGG+TGG 0.589017 1_1:-81138361 Msa0047940:CDS
TAGGCTTCACATTGTTGGCG+AGG 0.601015 1_1:-81136500 Msa0047940:CDS
TGATCACAATCAAAGTCAAG+TGG 0.602396 1_1:-81138371 Msa0047940:CDS
ATTATCCATATCTGATATTG+CGG 0.603030 1_1:-81136958 Msa0047940:CDS
TGTGACAGGCTGTTGAGTTG+TGG 0.603950 1_1:-81136603 Msa0047940:intron
TGGCATCTCTTGTTGTACCA+GGG 0.611518 1_1:-81138501 Msa0047940:CDS
ATGAAACTACCCACTTGGAA+GGG 0.616924 1_1:+81138303 None:intergenic
TTCTCAAATACACTGCAAAG+AGG 0.622514 1_1:-81138558 Msa0047940:five_prime_UTR
TGACACCAGGCATAGCTAGG+AGG 0.623817 1_1:+81136455 None:intergenic
GATCACAATCAAAGTCAAGT+GGG 0.633860 1_1:-81138370 Msa0047940:CDS
TTCTAACAGAAAACCCACCA+AGG 0.672376 1_1:+81138419 None:intergenic
AGCCAAGATAATGATGCATG+TGG 0.723016 1_1:-81138395 Msa0047940:CDS
GATACCAGGATCATACAGCG+AGG 0.785382 1_1:-81136806 Msa0047940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTAGTTTATTCTATTTT+TGG - chr1_1:81136891-81136910 Msa0047940:intron 15.0%
!!! TTTAAAGAGTAAATTTTTAG+AGG + chr1_1:81137537-81137556 None:intergenic 15.0%
!! AAAATGAAATTAGTATAAGA+TGG + chr1_1:81137822-81137841 None:intergenic 15.0%
!!! ATCTTATACTAATTTCATTT+TGG - chr1_1:81137821-81137840 Msa0047940:intron 15.0%
!!! ACAATTTTTCAAAACAAAAA+AGG + chr1_1:81138414-81138433 None:intergenic 15.0%
!!! GATTTAGTTTATTCTATTTT+TGG - chr1_1:81136891-81136910 Msa0047940:intron 15.0%
!!! TTTAAAGAGTAAATTTTTAG+AGG + chr1_1:81137537-81137556 None:intergenic 15.0%
!! AAAATGAAATTAGTATAAGA+TGG + chr1_1:81137822-81137841 None:intergenic 15.0%
!!! ATCTTATACTAATTTCATTT+TGG - chr1_1:81137821-81137840 Msa0047940:intron 15.0%
!!! ACAATTTTTCAAAACAAAAA+AGG + chr1_1:81138414-81138433 None:intergenic 15.0%
!!! TTTAGAAAGAGTATTGTTTA+AGG - chr1_1:81136807-81136826 Msa0047940:CDS 20.0%
!!! ATTATCACAAACTTTTAACA+AGG + chr1_1:81136835-81136854 None:intergenic 20.0%
!!! ATTTTGAAAACAAGCTAAAA+AGG + chr1_1:81136967-81136986 None:intergenic 20.0%
!!! ATATTAGTTCTTGAATTTTG+TGG - chr1_1:81137042-81137061 Msa0047940:intron 20.0%
!! ATCATTTCTCTAATTGAAAT+TGG - chr1_1:81137212-81137231 Msa0047940:intron 20.0%
!!! CAACAAATACTATTTTCTTT+AGG + chr1_1:81137647-81137666 None:intergenic 20.0%
!!! ATTTGTTGATAAAGTATCAA+TGG - chr1_1:81137659-81137678 Msa0047940:intron 20.0%
!!! TTTGTTGATAAAGTATCAAT+GGG - chr1_1:81137660-81137679 Msa0047940:intron 20.0%
!!! TTGATTTTTCAATACTATCT+GGG + chr1_1:81137708-81137727 None:intergenic 20.0%
!!! TTTGATTTTTCAATACTATC+TGG + chr1_1:81137709-81137728 None:intergenic 20.0%
!!! AGATAGTATTGAAAAATCAA+AGG - chr1_1:81137708-81137727 Msa0047940:intron 20.0%
!!! ATTCTACTTTTTGCTAATAT+AGG - chr1_1:81137747-81137766 Msa0047940:intron 20.0%
!! GTAATCATTTAGAAAGTTAT+AGG - chr1_1:81137929-81137948 Msa0047940:intron 20.0%
!! CAAAAGATAATGAAATAAGA+TGG + chr1_1:81137971-81137990 None:intergenic 20.0%
!! ATATAAAATGCAAATGCATA+AGG + chr1_1:81137995-81138014 None:intergenic 20.0%
!!! TTTAGAAAGAGTATTGTTTA+AGG - chr1_1:81136807-81136826 Msa0047940:CDS 20.0%
!!! ATTATCACAAACTTTTAACA+AGG + chr1_1:81136835-81136854 None:intergenic 20.0%
!!! ATTTTGAAAACAAGCTAAAA+AGG + chr1_1:81136967-81136986 None:intergenic 20.0%
!!! ATATTAGTTCTTGAATTTTG+TGG - chr1_1:81137042-81137061 Msa0047940:intron 20.0%
!! ATCATTTCTCTAATTGAAAT+TGG - chr1_1:81137212-81137231 Msa0047940:intron 20.0%
!!! CAACAAATACTATTTTCTTT+AGG + chr1_1:81137647-81137666 None:intergenic 20.0%
!!! ATTTGTTGATAAAGTATCAA+TGG - chr1_1:81137659-81137678 Msa0047940:intron 20.0%
!!! TTTGTTGATAAAGTATCAAT+GGG - chr1_1:81137660-81137679 Msa0047940:intron 20.0%
!!! TTGATTTTTCAATACTATCT+GGG + chr1_1:81137708-81137727 None:intergenic 20.0%
!!! TTTGATTTTTCAATACTATC+TGG + chr1_1:81137709-81137728 None:intergenic 20.0%
!!! AGATAGTATTGAAAAATCAA+AGG - chr1_1:81137708-81137727 Msa0047940:intron 20.0%
!!! ATTCTACTTTTTGCTAATAT+AGG - chr1_1:81137747-81137766 Msa0047940:intron 20.0%
!! GTAATCATTTAGAAAGTTAT+AGG - chr1_1:81137929-81137948 Msa0047940:intron 20.0%
!! CAAAAGATAATGAAATAAGA+TGG + chr1_1:81137971-81137990 None:intergenic 20.0%
!! ATATAAAATGCAAATGCATA+AGG + chr1_1:81137995-81138014 None:intergenic 20.0%
!! TTATGGATTGCATAAAGATT+TGG - chr1_1:81136705-81136724 Msa0047940:intron 25.0%
! ATATCTATTTGACTATGTAG+TGG - chr1_1:81136869-81136888 Msa0047940:intron 25.0%
! ACAACTCGATAATTAATCAA+TGG + chr1_1:81137104-81137123 None:intergenic 25.0%
! ATCAAATTTCGACATCAATT+TGG + chr1_1:81137174-81137193 None:intergenic 25.0%
! TCAAAAATTGTATTGGAGAA+GGG - chr1_1:81137422-81137441 Msa0047940:intron 25.0%
! GTTGAAAATATAAGGGAAAA+TGG + chr1_1:81137578-81137597 None:intergenic 25.0%
!!! TGATTTTTCAATACTATCTG+GGG + chr1_1:81137707-81137726 None:intergenic 25.0%
!! TAGTATTGAAAAATCAAAGG+AGG - chr1_1:81137711-81137730 Msa0047940:intron 25.0%
!! AGTATTGAAAAATCAAAGGA+GGG - chr1_1:81137712-81137731 Msa0047940:intron 25.0%
!!! CTCTCGATTTGAATAATTTT+TGG - chr1_1:81137790-81137809 Msa0047940:intron 25.0%
!!! CAACAACTGTTTTTTTTGTA+GGG - chr1_1:81138051-81138070 Msa0047940:intron 25.0%
! ATTATCCATATCTGATATTG+CGG - chr1_1:81138076-81138095 Msa0047940:intron 25.0%
!!! TATGTTTGGATTACTGATTT+AGG - chr1_1:81138204-81138223 Msa0047940:intron 25.0%
!!! ATGTTTGGATTACTGATTTA+GGG - chr1_1:81138205-81138224 Msa0047940:intron 25.0%
! ATGAGATTGTTTCACAATTA+GGG + chr1_1:81138273-81138292 None:intergenic 25.0%
! AACAAAAAAGGTTATTGAGT+TGG + chr1_1:81138402-81138421 None:intergenic 25.0%
!!! TTGTTTTGAAAAATTGTGAC+AGG - chr1_1:81138417-81138436 Msa0047940:CDS 25.0%
! ATTCCAATTGAAAATACATC+TGG - chr1_1:81138472-81138491 Msa0047940:CDS 25.0%
! AATGACTTAAAACACGTTTA+AGG + chr1_1:81138615-81138634 None:intergenic 25.0%
!! TTATGGATTGCATAAAGATT+TGG - chr1_1:81136705-81136724 Msa0047940:intron 25.0%
! ATATCTATTTGACTATGTAG+TGG - chr1_1:81136869-81136888 Msa0047940:intron 25.0%
! ACAACTCGATAATTAATCAA+TGG + chr1_1:81137104-81137123 None:intergenic 25.0%
! ATCAAATTTCGACATCAATT+TGG + chr1_1:81137174-81137193 None:intergenic 25.0%
! TCAAAAATTGTATTGGAGAA+GGG - chr1_1:81137422-81137441 Msa0047940:intron 25.0%
! GTTGAAAATATAAGGGAAAA+TGG + chr1_1:81137578-81137597 None:intergenic 25.0%
!!! TGATTTTTCAATACTATCTG+GGG + chr1_1:81137707-81137726 None:intergenic 25.0%
!! TAGTATTGAAAAATCAAAGG+AGG - chr1_1:81137711-81137730 Msa0047940:intron 25.0%
!! AGTATTGAAAAATCAAAGGA+GGG - chr1_1:81137712-81137731 Msa0047940:intron 25.0%
!!! CTCTCGATTTGAATAATTTT+TGG - chr1_1:81137790-81137809 Msa0047940:intron 25.0%
!!! CAACAACTGTTTTTTTTGTA+GGG - chr1_1:81138051-81138070 Msa0047940:intron 25.0%
! ATTATCCATATCTGATATTG+CGG - chr1_1:81138076-81138095 Msa0047940:intron 25.0%
!!! TATGTTTGGATTACTGATTT+AGG - chr1_1:81138204-81138223 Msa0047940:intron 25.0%
!!! ATGTTTGGATTACTGATTTA+GGG - chr1_1:81138205-81138224 Msa0047940:intron 25.0%
! ATGAGATTGTTTCACAATTA+GGG + chr1_1:81138273-81138292 None:intergenic 25.0%
! AACAAAAAAGGTTATTGAGT+TGG + chr1_1:81138402-81138421 None:intergenic 25.0%
!!! TTGTTTTGAAAAATTGTGAC+AGG - chr1_1:81138417-81138436 Msa0047940:CDS 25.0%
! ATTCCAATTGAAAATACATC+TGG - chr1_1:81138472-81138491 Msa0047940:CDS 25.0%
! AATGACTTAAAACACGTTTA+AGG + chr1_1:81138615-81138634 None:intergenic 25.0%
AAGTGTGAGAAATGGAAAAA+GGG + chr1_1:81136429-81136448 None:intergenic 30.0%
! GAAATTTGAAGTGTGAGAAA+TGG + chr1_1:81136437-81136456 None:intergenic 30.0%
! ATCTGAAAAGTGCACAAAAA+TGG - chr1_1:81136587-81136606 Msa0047940:CDS 30.0%
! TCTGAAAAGTGCACAAAAAT+GGG - chr1_1:81136588-81136607 Msa0047940:CDS 30.0%
AACTAATATGTACTCAACCA+TGG + chr1_1:81137031-81137050 None:intergenic 30.0%
AAGAAATAGATGACATTGAG+AGG - chr1_1:81137340-81137359 Msa0047940:intron 30.0%
AGAAATAGATGACATTGAGA+GGG - chr1_1:81137341-81137360 Msa0047940:intron 30.0%
AATACAAACTTCTCCTCATT+TGG - chr1_1:81137393-81137412 Msa0047940:intron 30.0%
ATACAAACTTCTCCTCATTT+GGG - chr1_1:81137394-81137413 Msa0047940:intron 30.0%
CTCAAAAATTGTATTGGAGA+AGG - chr1_1:81137421-81137440 Msa0047940:intron 30.0%
TTGGAGGGTTGAAAATATAA+GGG + chr1_1:81137585-81137604 None:intergenic 30.0%
TTTGGAGGGTTGAAAATATA+AGG + chr1_1:81137586-81137605 None:intergenic 30.0%
! TAAAGTATCAATGGGAGATT+TGG - chr1_1:81137668-81137687 Msa0047940:intron 30.0%
AGTTTCACGAATTTGAATAC+TGG - chr1_1:81137863-81137882 Msa0047940:intron 30.0%
GAAAACTTTGTTCAGAGTTA+TGG - chr1_1:81137885-81137904 Msa0047940:intron 30.0%
!!! GCAACAACTGTTTTTTTTGT+AGG - chr1_1:81138050-81138069 Msa0047940:intron 30.0%
GCAATATCAGATATGGATAA+TGG + chr1_1:81138077-81138096 None:intergenic 30.0%
CTGATATGATATTCGTACTT+TGG + chr1_1:81138120-81138139 None:intergenic 30.0%
CAAAGTACGAATATCATATC+AGG - chr1_1:81138118-81138137 Msa0047940:intron 30.0%
!! TGTTTGGATTACTGATTTAG+GGG - chr1_1:81138206-81138225 Msa0047940:intron 30.0%
CATGAGATTGTTTCACAATT+AGG + chr1_1:81138274-81138293 None:intergenic 30.0%
!! TGATTTTGAAGAGGCTTTTA+AGG - chr1_1:81138297-81138316 Msa0047940:intron 30.0%
GAAGAAGTAAATCATAGTTC+CGG + chr1_1:81138510-81138529 None:intergenic 30.0%
ATGATTTACTTCTTCGTCAT+AGG - chr1_1:81138515-81138534 Msa0047940:exon 30.0%
AAGTGTGAGAAATGGAAAAA+GGG + chr1_1:81136429-81136448 None:intergenic 30.0%
! GAAATTTGAAGTGTGAGAAA+TGG + chr1_1:81136437-81136456 None:intergenic 30.0%
! ATCTGAAAAGTGCACAAAAA+TGG - chr1_1:81136587-81136606 Msa0047940:CDS 30.0%
! TCTGAAAAGTGCACAAAAAT+GGG - chr1_1:81136588-81136607 Msa0047940:CDS 30.0%
AACTAATATGTACTCAACCA+TGG + chr1_1:81137031-81137050 None:intergenic 30.0%
AAGAAATAGATGACATTGAG+AGG - chr1_1:81137340-81137359 Msa0047940:intron 30.0%
AGAAATAGATGACATTGAGA+GGG - chr1_1:81137341-81137360 Msa0047940:intron 30.0%
AATACAAACTTCTCCTCATT+TGG - chr1_1:81137393-81137412 Msa0047940:intron 30.0%
ATACAAACTTCTCCTCATTT+GGG - chr1_1:81137394-81137413 Msa0047940:intron 30.0%
CTCAAAAATTGTATTGGAGA+AGG - chr1_1:81137421-81137440 Msa0047940:intron 30.0%
TTGGAGGGTTGAAAATATAA+GGG + chr1_1:81137585-81137604 None:intergenic 30.0%
TTTGGAGGGTTGAAAATATA+AGG + chr1_1:81137586-81137605 None:intergenic 30.0%
! TAAAGTATCAATGGGAGATT+TGG - chr1_1:81137668-81137687 Msa0047940:intron 30.0%
AGTTTCACGAATTTGAATAC+TGG - chr1_1:81137863-81137882 Msa0047940:intron 30.0%
GAAAACTTTGTTCAGAGTTA+TGG - chr1_1:81137885-81137904 Msa0047940:intron 30.0%
!!! GCAACAACTGTTTTTTTTGT+AGG - chr1_1:81138050-81138069 Msa0047940:intron 30.0%
GCAATATCAGATATGGATAA+TGG + chr1_1:81138077-81138096 None:intergenic 30.0%
CTGATATGATATTCGTACTT+TGG + chr1_1:81138120-81138139 None:intergenic 30.0%
CAAAGTACGAATATCATATC+AGG - chr1_1:81138118-81138137 Msa0047940:intron 30.0%
!! TGTTTGGATTACTGATTTAG+GGG - chr1_1:81138206-81138225 Msa0047940:intron 30.0%
CATGAGATTGTTTCACAATT+AGG + chr1_1:81138274-81138293 None:intergenic 30.0%
!! TGATTTTGAAGAGGCTTTTA+AGG - chr1_1:81138297-81138316 Msa0047940:intron 30.0%
GAAGAAGTAAATCATAGTTC+CGG + chr1_1:81138510-81138529 None:intergenic 30.0%
ATGATTTACTTCTTCGTCAT+AGG - chr1_1:81138515-81138534 Msa0047940:exon 30.0%
GAAGTGTGAGAAATGGAAAA+AGG + chr1_1:81136430-81136449 None:intergenic 35.0%
TTCTCAAATACACTGCAAAG+AGG - chr1_1:81136476-81136495 Msa0047940:CDS 35.0%
ATCATTGACCTTAATCTCCA+TGG - chr1_1:81136507-81136526 Msa0047940:CDS 35.0%
!! AAAAATGGGTTTTCCTTGGT+GGG - chr1_1:81136602-81136621 Msa0047940:intron 35.0%
AACCACATGCATCATTATCT+TGG + chr1_1:81136644-81136663 None:intergenic 35.0%
TGATCACAATCAAAGTCAAG+TGG - chr1_1:81136663-81136682 Msa0047940:intron 35.0%
GATCACAATCAAAGTCAAGT+GGG - chr1_1:81136664-81136683 Msa0047940:intron 35.0%
ATTAGATGAAACTACCCACT+TGG + chr1_1:81136739-81136758 None:intergenic 35.0%
GTGGTTAACGACATTCAAAA+TGG - chr1_1:81137061-81137080 Msa0047940:intron 35.0%
GTTAACGACATTCAAAATGG+TGG - chr1_1:81137064-81137083 Msa0047940:intron 35.0%
GAAATAGATGACATTGAGAG+GGG - chr1_1:81137342-81137361 Msa0047940:intron 35.0%
AAATAGATGACATTGAGAGG+GGG - chr1_1:81137343-81137362 Msa0047940:intron 35.0%
TACAAACTTCTCCTCATTTG+GGG - chr1_1:81137395-81137414 Msa0047940:intron 35.0%
GGGGAACTCAAAAATTGTAT+TGG - chr1_1:81137415-81137434 Msa0047940:intron 35.0%
! ATTGTATTGGAGAAGGGTTT+TGG - chr1_1:81137428-81137447 Msa0047940:intron 35.0%
CAAACATATAATGACGAACG+TGG + chr1_1:81138192-81138211 None:intergenic 35.0%
CACGTTCGTCATTATATGTT+TGG - chr1_1:81138190-81138209 Msa0047940:intron 35.0%
! CCACCAGATGTATTTTCAAT+TGG + chr1_1:81138478-81138497 None:intergenic 35.0%
CCAATTGAAAATACATCTGG+TGG - chr1_1:81138475-81138494 Msa0047940:CDS 35.0%
GAAGTGTGAGAAATGGAAAA+AGG + chr1_1:81136430-81136449 None:intergenic 35.0%
TTCTCAAATACACTGCAAAG+AGG - chr1_1:81136476-81136495 Msa0047940:CDS 35.0%
ATCATTGACCTTAATCTCCA+TGG - chr1_1:81136507-81136526 Msa0047940:CDS 35.0%
!! AAAAATGGGTTTTCCTTGGT+GGG - chr1_1:81136602-81136621 Msa0047940:intron 35.0%
AACCACATGCATCATTATCT+TGG + chr1_1:81136644-81136663 None:intergenic 35.0%
TGATCACAATCAAAGTCAAG+TGG - chr1_1:81136663-81136682 Msa0047940:intron 35.0%
GATCACAATCAAAGTCAAGT+GGG - chr1_1:81136664-81136683 Msa0047940:intron 35.0%
ATTAGATGAAACTACCCACT+TGG + chr1_1:81136739-81136758 None:intergenic 35.0%
GTGGTTAACGACATTCAAAA+TGG - chr1_1:81137061-81137080 Msa0047940:intron 35.0%
GTTAACGACATTCAAAATGG+TGG - chr1_1:81137064-81137083 Msa0047940:intron 35.0%
GAAATAGATGACATTGAGAG+GGG - chr1_1:81137342-81137361 Msa0047940:intron 35.0%
AAATAGATGACATTGAGAGG+GGG - chr1_1:81137343-81137362 Msa0047940:intron 35.0%
TACAAACTTCTCCTCATTTG+GGG - chr1_1:81137395-81137414 Msa0047940:intron 35.0%
GGGGAACTCAAAAATTGTAT+TGG - chr1_1:81137415-81137434 Msa0047940:intron 35.0%
! ATTGTATTGGAGAAGGGTTT+TGG - chr1_1:81137428-81137447 Msa0047940:intron 35.0%
CAAACATATAATGACGAACG+TGG + chr1_1:81138192-81138211 None:intergenic 35.0%
CACGTTCGTCATTATATGTT+TGG - chr1_1:81138190-81138209 Msa0047940:intron 35.0%
! CCACCAGATGTATTTTCAAT+TGG + chr1_1:81138478-81138497 None:intergenic 35.0%
CCAATTGAAAATACATCTGG+TGG - chr1_1:81138475-81138494 Msa0047940:CDS 35.0%
!! GCACAAAAATGGGTTTTCCT+TGG - chr1_1:81136598-81136617 Msa0047940:CDS 40.0%
!! CAAAAATGGGTTTTCCTTGG+TGG - chr1_1:81136601-81136620 Msa0047940:intron 40.0%
TTCTAACAGAAAACCCACCA+AGG + chr1_1:81136618-81136637 None:intergenic 40.0%
AGCCAAGATAATGATGCATG+TGG - chr1_1:81136639-81136658 Msa0047940:intron 40.0%
AATCAAAGTCAAGTGGGTAG+TGG - chr1_1:81136670-81136689 Msa0047940:intron 40.0%
ATTTGGTATCCCTTCCAAGT+GGG - chr1_1:81136722-81136741 Msa0047940:intron 40.0%
ATGAAACTACCCACTTGGAA+GGG + chr1_1:81136734-81136753 None:intergenic 40.0%
TGTGACAATTTGCAAGACCA+TGG - chr1_1:81137011-81137030 Msa0047940:intron 40.0%
GGATAGTCAACACAGTTCAA+TGG + chr1_1:81137153-81137172 None:intergenic 40.0%
TTCAGCCAAAGAGTAGACTA+AGG - chr1_1:81137252-81137271 Msa0047940:intron 40.0%
CAAAGCCTTAGTCTACTCTT+TGG + chr1_1:81137260-81137279 None:intergenic 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG - chr1_1:81137270-81137289 Msa0047940:intron 40.0%
AGGGGTTTGGAAAAAAAGGA+AGG - chr1_1:81137308-81137327 Msa0047940:intron 40.0%
GAAAAAAAGGAAGGAGCAAG+TGG - chr1_1:81137317-81137336 Msa0047940:intron 40.0%
ACAAACTTCTCCTCATTTGG+GGG - chr1_1:81137396-81137415 Msa0047940:intron 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG + chr1_1:81137409-81137428 None:intergenic 40.0%
CTTTGTCTGAGAGTTTGGAT+GGG + chr1_1:81137624-81137643 None:intergenic 40.0%
! TTAGGCTTTGTCTGAGAGTT+TGG + chr1_1:81137629-81137648 None:intergenic 40.0%
!! TTACTGATTTAGGGGATACC+AGG - chr1_1:81138214-81138233 Msa0047940:intron 40.0%
!! CTCATGCAGTGATTTTGAAG+AGG - chr1_1:81138288-81138307 Msa0047940:intron 40.0%
!! GCACAAAAATGGGTTTTCCT+TGG - chr1_1:81136598-81136617 Msa0047940:CDS 40.0%
!! CAAAAATGGGTTTTCCTTGG+TGG - chr1_1:81136601-81136620 Msa0047940:intron 40.0%
TTCTAACAGAAAACCCACCA+AGG + chr1_1:81136618-81136637 None:intergenic 40.0%
AGCCAAGATAATGATGCATG+TGG - chr1_1:81136639-81136658 Msa0047940:intron 40.0%
AATCAAAGTCAAGTGGGTAG+TGG - chr1_1:81136670-81136689 Msa0047940:intron 40.0%
ATTTGGTATCCCTTCCAAGT+GGG - chr1_1:81136722-81136741 Msa0047940:intron 40.0%
ATGAAACTACCCACTTGGAA+GGG + chr1_1:81136734-81136753 None:intergenic 40.0%
TGTGACAATTTGCAAGACCA+TGG - chr1_1:81137011-81137030 Msa0047940:intron 40.0%
GGATAGTCAACACAGTTCAA+TGG + chr1_1:81137153-81137172 None:intergenic 40.0%
TTCAGCCAAAGAGTAGACTA+AGG - chr1_1:81137252-81137271 Msa0047940:intron 40.0%
CAAAGCCTTAGTCTACTCTT+TGG + chr1_1:81137260-81137279 None:intergenic 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG - chr1_1:81137270-81137289 Msa0047940:intron 40.0%
AGGGGTTTGGAAAAAAAGGA+AGG - chr1_1:81137308-81137327 Msa0047940:intron 40.0%
GAAAAAAAGGAAGGAGCAAG+TGG - chr1_1:81137317-81137336 Msa0047940:intron 40.0%
ACAAACTTCTCCTCATTTGG+GGG - chr1_1:81137396-81137415 Msa0047940:intron 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG + chr1_1:81137409-81137428 None:intergenic 40.0%
CTTTGTCTGAGAGTTTGGAT+GGG + chr1_1:81137624-81137643 None:intergenic 40.0%
! TTAGGCTTTGTCTGAGAGTT+TGG + chr1_1:81137629-81137648 None:intergenic 40.0%
!! TTACTGATTTAGGGGATACC+AGG - chr1_1:81138214-81138233 Msa0047940:intron 40.0%
!! CTCATGCAGTGATTTTGAAG+AGG - chr1_1:81138288-81138307 Msa0047940:intron 40.0%
GACCTTAATCTCCATGGCTA+TGG - chr1_1:81136513-81136532 Msa0047940:CDS 45.0%
TGCCATAGCCATGGAGATTA+AGG + chr1_1:81136518-81136537 None:intergenic 45.0%
AACAAGAGATGCCATAGCCA+TGG + chr1_1:81136527-81136546 None:intergenic 45.0%
! ATGGCATCTCTTGTTGTACC+AGG - chr1_1:81136532-81136551 Msa0047940:CDS 45.0%
! TGGCATCTCTTGTTGTACCA+GGG - chr1_1:81136533-81136552 Msa0047940:CDS 45.0%
! AGTGGTGGTGATGTCTCTTA+TGG - chr1_1:81136688-81136707 Msa0047940:intron 45.0%
! GATTTGGTATCCCTTCCAAG+TGG - chr1_1:81136721-81136740 Msa0047940:intron 45.0%
GATGAAACTACCCACTTGGA+AGG + chr1_1:81136735-81136754 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr1_1:81137274-81137293 Msa0047940:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr1_1:81137275-81137294 Msa0047940:intron 45.0%
!! GTATTGGAGAAGGGTTTTGG+CGG - chr1_1:81137431-81137450 Msa0047940:intron 45.0%
!! TATTGGAGAAGGGTTTTGGC+GGG - chr1_1:81137432-81137451 Msa0047940:intron 45.0%
GCTTTGTCTGAGAGTTTGGA+TGG + chr1_1:81137625-81137644 None:intergenic 45.0%
AGCTGCCGCAATATCAGATA+TGG + chr1_1:81138084-81138103 None:intergenic 45.0%
CGTCATAGGCTTCACATTGT+TGG - chr1_1:81138529-81138548 Msa0047940:exon 45.0%
! AGGAACTCTTTTCTGACACC+AGG + chr1_1:81138595-81138614 None:intergenic 45.0%
GACCTTAATCTCCATGGCTA+TGG - chr1_1:81136513-81136532 Msa0047940:CDS 45.0%
TGCCATAGCCATGGAGATTA+AGG + chr1_1:81136518-81136537 None:intergenic 45.0%
AACAAGAGATGCCATAGCCA+TGG + chr1_1:81136527-81136546 None:intergenic 45.0%
! ATGGCATCTCTTGTTGTACC+AGG - chr1_1:81136532-81136551 Msa0047940:CDS 45.0%
! TGGCATCTCTTGTTGTACCA+GGG - chr1_1:81136533-81136552 Msa0047940:CDS 45.0%
! AGTGGTGGTGATGTCTCTTA+TGG - chr1_1:81136688-81136707 Msa0047940:intron 45.0%
! GATTTGGTATCCCTTCCAAG+TGG - chr1_1:81136721-81136740 Msa0047940:intron 45.0%
GATGAAACTACCCACTTGGA+AGG + chr1_1:81136735-81136754 None:intergenic 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG - chr1_1:81137274-81137293 Msa0047940:intron 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr1_1:81137275-81137294 Msa0047940:intron 45.0%
!! GTATTGGAGAAGGGTTTTGG+CGG - chr1_1:81137431-81137450 Msa0047940:intron 45.0%
!! TATTGGAGAAGGGTTTTGGC+GGG - chr1_1:81137432-81137451 Msa0047940:intron 45.0%
GCTTTGTCTGAGAGTTTGGA+TGG + chr1_1:81137625-81137644 None:intergenic 45.0%
AGCTGCCGCAATATCAGATA+TGG + chr1_1:81138084-81138103 None:intergenic 45.0%
CGTCATAGGCTTCACATTGT+TGG - chr1_1:81138529-81138548 Msa0047940:exon 45.0%
! AGGAACTCTTTTCTGACACC+AGG + chr1_1:81138595-81138614 None:intergenic 45.0%
!! CAATAAATATAAATAAAATA+AGG + chr1_1:81138362-81138381 None:intergenic 5.0%
!!! CTTATTTTATTTATATTTAT+TGG - chr1_1:81138360-81138379 Msa0047940:CDS 5.0%
!! CAATAAATATAAATAAAATA+AGG + chr1_1:81138362-81138381 None:intergenic 5.0%
!!! CTTATTTTATTTATATTTAT+TGG - chr1_1:81138360-81138379 Msa0047940:CDS 5.0%
AGTTGAGAACTTGAGAGCCC+TGG + chr1_1:81136553-81136572 None:intergenic 50.0%
! CAAAGTCAAGTGGGTAGTGG+TGG - chr1_1:81136673-81136692 Msa0047940:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr1_1:81137273-81137292 Msa0047940:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr1_1:81137280-81137299 Msa0047940:intron 50.0%
GGGGAGGGGTTTGGAAAAAA+AGG - chr1_1:81137304-81137323 Msa0047940:intron 50.0%
TAGATGACATTGAGAGGGGG+AGG - chr1_1:81137346-81137365 Msa0047940:intron 50.0%
!!! AGAAGGGTTTTGGCGGGTTT+TGG - chr1_1:81137438-81137457 Msa0047940:intron 50.0%
TCTGAGAGTTTGGATGGGAG+GGG + chr1_1:81137619-81137638 None:intergenic 50.0%
GTCTGAGAGTTTGGATGGGA+GGG + chr1_1:81137620-81137639 None:intergenic 50.0%
TGTCTGAGAGTTTGGATGGG+AGG + chr1_1:81137621-81137640 None:intergenic 50.0%
GATACCAGGATCATACAGCG+AGG - chr1_1:81138228-81138247 Msa0047940:intron 50.0%
! TGTGACAGGCTGTTGAGTTG+TGG - chr1_1:81138431-81138450 Msa0047940:CDS 50.0%
!! CATCTGGTGGAAGCATTCAC+CGG - chr1_1:81138488-81138507 Msa0047940:CDS 50.0%
TAGGCTTCACATTGTTGGCG+AGG - chr1_1:81138534-81138553 Msa0047940:five_prime_UTR 50.0%
TTCTGACACCAGGCATAGCT+AGG + chr1_1:81138585-81138604 None:intergenic 50.0%
AGTTGAGAACTTGAGAGCCC+TGG + chr1_1:81136553-81136572 None:intergenic 50.0%
! CAAAGTCAAGTGGGTAGTGG+TGG - chr1_1:81136673-81136692 Msa0047940:intron 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG - chr1_1:81137273-81137292 Msa0047940:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr1_1:81137280-81137299 Msa0047940:intron 50.0%
GGGGAGGGGTTTGGAAAAAA+AGG - chr1_1:81137304-81137323 Msa0047940:intron 50.0%
TAGATGACATTGAGAGGGGG+AGG - chr1_1:81137346-81137365 Msa0047940:intron 50.0%
!!! AGAAGGGTTTTGGCGGGTTT+TGG - chr1_1:81137438-81137457 Msa0047940:intron 50.0%
TCTGAGAGTTTGGATGGGAG+GGG + chr1_1:81137619-81137638 None:intergenic 50.0%
GTCTGAGAGTTTGGATGGGA+GGG + chr1_1:81137620-81137639 None:intergenic 50.0%
TGTCTGAGAGTTTGGATGGG+AGG + chr1_1:81137621-81137640 None:intergenic 50.0%
GATACCAGGATCATACAGCG+AGG - chr1_1:81138228-81138247 Msa0047940:intron 50.0%
! TGTGACAGGCTGTTGAGTTG+TGG - chr1_1:81138431-81138450 Msa0047940:CDS 50.0%
!! CATCTGGTGGAAGCATTCAC+CGG - chr1_1:81138488-81138507 Msa0047940:CDS 50.0%
TAGGCTTCACATTGTTGGCG+AGG - chr1_1:81138534-81138553 Msa0047940:five_prime_UTR 50.0%
TTCTGACACCAGGCATAGCT+AGG + chr1_1:81138585-81138604 None:intergenic 50.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr1_1:81137279-81137298 Msa0047940:intron 55.0%
ACATTGAGAGGGGGAGGCTT+TGG - chr1_1:81137352-81137371 Msa0047940:intron 55.0%
CATTGAGAGGGGGAGGCTTT+GGG - chr1_1:81137353-81137372 Msa0047940:intron 55.0%
ATTGAGAGGGGGAGGCTTTG+GGG - chr1_1:81137354-81137373 Msa0047940:intron 55.0%
!!! GGGTTTTGGCGGGTTTTGGA+TGG - chr1_1:81137442-81137461 Msa0047940:intron 55.0%
GAGTTTGGATGGGAGGGGAA+GGG + chr1_1:81137614-81137633 None:intergenic 55.0%
AGAGTTTGGATGGGAGGGGA+AGG + chr1_1:81137615-81137634 None:intergenic 55.0%
GCATCCTCGCTGTATGATCC+TGG + chr1_1:81138235-81138254 None:intergenic 55.0%
! ACAGGCTGTTGAGTTGTGGC+TGG - chr1_1:81138435-81138454 Msa0047940:CDS 55.0%
CATTGTTGGCGAGGTGCAGT+TGG - chr1_1:81138543-81138562 Msa0047940:five_prime_UTR 55.0%
GACACCAGGCATAGCTAGGA+GGG + chr1_1:81138581-81138600 None:intergenic 55.0%
TGACACCAGGCATAGCTAGG+AGG + chr1_1:81138582-81138601 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr1_1:81137279-81137298 Msa0047940:intron 55.0%
ACATTGAGAGGGGGAGGCTT+TGG - chr1_1:81137352-81137371 Msa0047940:intron 55.0%
CATTGAGAGGGGGAGGCTTT+GGG - chr1_1:81137353-81137372 Msa0047940:intron 55.0%
ATTGAGAGGGGGAGGCTTTG+GGG - chr1_1:81137354-81137373 Msa0047940:intron 55.0%
!!! GGGTTTTGGCGGGTTTTGGA+TGG - chr1_1:81137442-81137461 Msa0047940:intron 55.0%
GAGTTTGGATGGGAGGGGAA+GGG + chr1_1:81137614-81137633 None:intergenic 55.0%
AGAGTTTGGATGGGAGGGGA+AGG + chr1_1:81137615-81137634 None:intergenic 55.0%
GCATCCTCGCTGTATGATCC+TGG + chr1_1:81138235-81138254 None:intergenic 55.0%
! ACAGGCTGTTGAGTTGTGGC+TGG - chr1_1:81138435-81138454 Msa0047940:CDS 55.0%
CATTGTTGGCGAGGTGCAGT+TGG - chr1_1:81138543-81138562 Msa0047940:five_prime_UTR 55.0%
GACACCAGGCATAGCTAGGA+GGG + chr1_1:81138581-81138600 None:intergenic 55.0%
TGACACCAGGCATAGCTAGG+AGG + chr1_1:81138582-81138601 None:intergenic 55.0%
CGAGTTTGGAGGGGAAGGGA+GGG - chr1_1:81137284-81137303 Msa0047940:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr1_1:81137285-81137304 Msa0047940:intron 60.0%
! TTGAGAGGGGGAGGCTTTGG+GGG - chr1_1:81137355-81137374 Msa0047940:intron 60.0%
!! GGGGAAGGGAAGGCTTTGGA+GGG + chr1_1:81137600-81137619 None:intergenic 60.0%
! AGGGGAAGGGAAGGCTTTGG+AGG + chr1_1:81137601-81137620 None:intergenic 60.0%
TTGGATGGGAGGGGAAGGGA+AGG + chr1_1:81137610-81137629 None:intergenic 60.0%
CAGGCATAGCTAGGAGGGAG+AGG + chr1_1:81138576-81138595 None:intergenic 60.0%
CTCTCCCTCCTAGCTATGCC+TGG - chr1_1:81138574-81138593 Msa0047940:five_prime_UTR 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG - chr1_1:81137284-81137303 Msa0047940:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr1_1:81137285-81137304 Msa0047940:intron 60.0%
! TTGAGAGGGGGAGGCTTTGG+GGG - chr1_1:81137355-81137374 Msa0047940:intron 60.0%
!! GGGGAAGGGAAGGCTTTGGA+GGG + chr1_1:81137600-81137619 None:intergenic 60.0%
! AGGGGAAGGGAAGGCTTTGG+AGG + chr1_1:81137601-81137620 None:intergenic 60.0%
TTGGATGGGAGGGGAAGGGA+AGG + chr1_1:81137610-81137629 None:intergenic 60.0%
CAGGCATAGCTAGGAGGGAG+AGG + chr1_1:81138576-81138595 None:intergenic 60.0%
CTCTCCCTCCTAGCTATGCC+TGG - chr1_1:81138574-81138593 Msa0047940:five_prime_UTR 60.0%
GCGAGTTTGGAGGGGAAGGG+AGG - chr1_1:81137283-81137302 Msa0047940:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - chr1_1:81137288-81137307 Msa0047940:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr1_1:81137289-81137308 Msa0047940:intron 65.0%
GGGAGGGGAAGGGAAGGCTT+TGG + chr1_1:81137604-81137623 None:intergenic 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG - chr1_1:81137283-81137302 Msa0047940:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - chr1_1:81137288-81137307 Msa0047940:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr1_1:81137289-81137308 Msa0047940:intron 65.0%
GGGAGGGGAAGGGAAGGCTT+TGG + chr1_1:81137604-81137623 None:intergenic 65.0%
TGGAGGGGAAGGGAGGGGAG+GGG - chr1_1:81137290-81137309 Msa0047940:intron 70.0%
GGGAAGGGAGGGGAGGGGTT+TGG - chr1_1:81137295-81137314 Msa0047940:intron 70.0%
TGGAGGGGAAGGGAGGGGAG+GGG - chr1_1:81137290-81137309 Msa0047940:intron 70.0%
GGGAAGGGAGGGGAGGGGTT+TGG - chr1_1:81137295-81137314 Msa0047940:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 81136417 81138639 81136417 ID=Msa0047940;Name=Msa0047940
chr1_1 mRNA 81136417 81138639 81136417 ID=Msa0047940-mRNA-1;Parent=Msa0047940;Name=Msa0047940-mRNA-1;_AED=0.08;_eAED=0.08;_QI=109|1|0.75|1|1|1|4|0|192
chr1_1 exon 81136417 81136617 81136417 ID=Msa0047940-mRNA-1:exon:28008;Parent=Msa0047940-mRNA-1
chr1_1 exon 81136738 81136830 81136738 ID=Msa0047940-mRNA-1:exon:28007;Parent=Msa0047940-mRNA-1
chr1_1 exon 81136917 81136984 81136917 ID=Msa0047940-mRNA-1:exon:28006;Parent=Msa0047940-mRNA-1
chr1_1 exon 81138317 81138639 81138317 ID=Msa0047940-mRNA-1:exon:28005;Parent=Msa0047940-mRNA-1
chr1_1 five_prime_UTR 81138531 81138639 81138531 ID=Msa0047940-mRNA-1:five_prime_utr;Parent=Msa0047940-mRNA-1
chr1_1 CDS 81138317 81138530 81138317 ID=Msa0047940-mRNA-1:cds;Parent=Msa0047940-mRNA-1
chr1_1 CDS 81136917 81136984 81136917 ID=Msa0047940-mRNA-1:cds;Parent=Msa0047940-mRNA-1
chr1_1 CDS 81136738 81136830 81136738 ID=Msa0047940-mRNA-1:cds;Parent=Msa0047940-mRNA-1
chr1_1 CDS 81136417 81136617 81136417 ID=Msa0047940-mRNA-1:cds;Parent=Msa0047940-mRNA-1
Gene Sequence

>Msa0047940

ATGGCTATGGCATCTCTTGTTGTACCAGGGCTCTCAAGTTCTCAACTTTATAGTCAAAATCATCTGAAAAGTGCACAAAAATGGGTTTTCCTTGGTGGGTTTTCTGTTAGAAGAGCCAAGATAATGATGCATGTGGTTGATCACAATCAAAGTCAAGTGGGTAGTGGTGGTGATGTCTCTTATGGATTGCATAAAGATTTGGTATCCCTTCCAAGGCCATTATCCATATCTGATATTGCGGCAGCTTCTGATGATCTTGCCAAAGTACGAATATCATATCAGGGGATACCAGGATCATACAGCGAGGATGCTGCACTTAAAGCTTACCCTAATTGTGAAACAATCTCATGCAGTGATTTTGAAGAGGCTTTTAAGGCTGTTGAGTTGTGGCTGGCTCATAAAGTTGTCATTCCAATTGAAAATACATCTGGTGGAAGCATTCACCGGAACTATGATTTACTTCTTCGTCATAGGCTTCACATTGTTGGCGAGGTGCAGTTGGCTACTAACCTCTCCCTCCTAGCTATGCCTGGTGTCAGAAAAGAGTTCCTTAAACGTGTTTTAAGTCATTCTCAG

Protein sequence

>Msa0047940

MAMASLVVPGLSSSQLYSQNHLKSAQKWVFLGGFSVRRAKIMMHVVDHNQSQVGSGGDVSYGLHKDLVSLPRPLSISDIAAASDDLAKVRISYQGIPGSYSEDAALKAYPNCETISCSDFEEAFKAVELWLAHKVVIPIENTSGGSIHRNYDLLLRHRLHIVGEVQLATNLSLLAMPGVRKEFLKRVLSHSQ