Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273710 | XP_024632312.1 | 94.183 | 447 | 25 | 1 | 1 | 447 | 1 | 446 | 0.0 | 810 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032040 | Msa0273710 | 0.828386 | 9.252548e-55 | -8.615850e-47 |
| Msa0033600 | Msa0273710 | 0.805799 | 1.120975e-49 | -8.615850e-47 |
| Msa0033650 | Msa0273710 | 0.809134 | 2.198121e-50 | -8.615850e-47 |
| Msa0035090 | Msa0273710 | 0.838582 | 2.640006e-57 | -8.615850e-47 |
| Msa0039200 | Msa0273710 | 0.842855 | 2.003875e-58 | -8.615850e-47 |
| Msa0040190 | Msa0273710 | 0.832374 | 9.804472e-56 | -8.615850e-47 |
| Msa0057260 | Msa0273710 | 0.810863 | 9.328248e-51 | -8.615850e-47 |
| Msa0057740 | Msa0273710 | 0.826535 | 2.572496e-54 | -8.615850e-47 |
| Msa0083570 | Msa0273710 | 0.809562 | 1.779959e-50 | -8.615850e-47 |
| Msa0086820 | Msa0273710 | 0.843653 | 1.227718e-58 | -8.615850e-47 |
| Msa0087880 | Msa0273710 | 0.825892 | 3.657463e-54 | -8.615850e-47 |
| Msa0089410 | Msa0273710 | 0.815535 | 8.796699e-52 | -8.615850e-47 |
| Msa0092750 | Msa0273710 | 0.830257 | 3.252379e-55 | -8.615850e-47 |
| Msa0094420 | Msa0273710 | 0.805962 | 1.036179e-49 | -8.615850e-47 |
| Msa0096230 | Msa0273710 | 0.837036 | 6.584985e-57 | -8.615850e-47 |
| Msa0102680 | Msa0273710 | 0.838325 | 3.075326e-57 | -8.615850e-47 |
| Msa0103060 | Msa0273710 | 0.825770 | 3.910974e-54 | -8.615850e-47 |
| Msa0119000 | Msa0273710 | 0.804735 | 1.873261e-49 | -8.615850e-47 |
| Msa0123940 | Msa0273710 | 0.817903 | 2.589958e-52 | -8.615850e-47 |
| Msa0130120 | Msa0273710 | 0.834339 | 3.174399e-56 | -8.615850e-47 |
| Msa0133670 | Msa0273710 | 0.846234 | 2.468644e-59 | -8.615850e-47 |
| Msa0133880 | Msa0273710 | 0.857292 | 1.802274e-62 | -8.615850e-47 |
| Msa0134550 | Msa0273710 | 0.831642 | 1.487142e-55 | -8.615850e-47 |
| Msa0143360 | Msa0273710 | 0.841651 | 4.174831e-58 | -8.615850e-47 |
| Msa0175900 | Msa0273710 | 0.846164 | 2.579201e-59 | -8.615850e-47 |
| Msa0180980 | Msa0273710 | 0.830527 | 2.793666e-55 | -8.615850e-47 |
| Msa0181290 | Msa0273710 | 0.825718 | 4.023154e-54 | -8.615850e-47 |
| Msa0184120 | Msa0273710 | 0.847958 | 8.315349e-60 | -8.615850e-47 |
| Msa0193650 | Msa0273710 | 0.868545 | 6.032136e-66 | -8.615850e-47 |
| Msa0207530 | Msa0273710 | 0.818971 | 1.483246e-52 | -8.615850e-47 |
| Msa0207900 | Msa0273710 | 0.811844 | 5.713418e-51 | -8.615850e-47 |
| Msa0207990 | Msa0273710 | 0.814998 | 1.158029e-51 | -8.615850e-47 |
| Msa0213650 | Msa0273710 | 0.830248 | 3.267844e-55 | -8.615850e-47 |
| Msa0216010 | Msa0273710 | 0.822093 | 2.847794e-53 | -8.615850e-47 |
| Msa0216560 | Msa0273710 | 0.815509 | 8.915815e-52 | -8.615850e-47 |
| Msa0222510 | Msa0273710 | 0.827060 | 1.927145e-54 | -8.615850e-47 |
| Msa0253410 | Msa0273710 | 0.809974 | 1.451563e-50 | -8.615850e-47 |
| Msa0256170 | Msa0273710 | 0.839249 | 1.773560e-57 | -8.615850e-47 |
| Msa0270610 | Msa0273710 | 0.805493 | 1.299612e-49 | -8.615850e-47 |
| Msa0273710 | Msa0281570 | 0.804442 | 2.156536e-49 | -8.615850e-47 |
| Msa0273710 | Msa0295840 | 0.814503 | 1.490688e-51 | -8.615850e-47 |
| Msa0273710 | Msa0301800 | 0.835235 | 1.887857e-56 | -8.615850e-47 |
| Msa0273710 | Msa0304870 | 0.818600 | 1.801316e-52 | -8.615850e-47 |
| Msa0273710 | Msa0307490 | 0.823492 | 1.345571e-53 | -8.615850e-47 |
| Msa0273710 | Msa0313990 | 0.843236 | 1.586063e-58 | -8.615850e-47 |
| Msa0273710 | Msa0336270 | 0.808599 | 2.860879e-50 | -8.615850e-47 |
| Msa0273710 | Msa0341260 | 0.820465 | 6.761217e-53 | -8.615850e-47 |
| Msa0273710 | Msa0344070 | 0.810022 | 1.416915e-50 | -8.615850e-47 |
| Msa0273710 | Msa0364530 | 0.800394 | 1.471013e-48 | -8.615850e-47 |
| Msa0273710 | Msa0365150 | 0.825599 | 4.293562e-54 | -8.615850e-47 |
| Msa0273710 | Msa0369750 | 0.824739 | 6.857778e-54 | -8.615850e-47 |
| Msa0273710 | Msa0370510 | 0.837454 | 5.149449e-57 | -8.615850e-47 |
| Msa0273710 | Msa0371610 | 0.803098 | 4.099299e-49 | -8.615850e-47 |
| Msa0273710 | Msa0377460 | 0.818772 | 1.645996e-52 | -8.615850e-47 |
| Msa0273710 | Msa0390950 | 0.829740 | 4.346275e-55 | -8.615850e-47 |
| Msa0273710 | Msa0420070 | 0.822633 | 2.133517e-53 | -8.615850e-47 |
| Msa0273710 | Msa0423110 | 0.842263 | 2.876491e-58 | -8.615850e-47 |
| Msa0273710 | Msa0426860 | 0.828136 | 1.062861e-54 | -8.615850e-47 |
| Msa0273710 | Msa0426890 | 0.821231 | 4.507846e-53 | -8.615850e-47 |
| Msa0273710 | Msa0427050 | 0.855550 | 5.852064e-62 | -8.615850e-47 |
| Msa0273710 | Msa0434630 | 0.800561 | 1.360231e-48 | -8.615850e-47 |
| Msa0273710 | Msa0456280 | 0.801279 | 9.707118e-49 | -8.615850e-47 |
| Msa0273710 | Msa0456480 | 0.810737 | 9.934745e-51 | -8.615850e-47 |
| Msa0273710 | Msa0463960 | 0.804349 | 2.254774e-49 | -8.615850e-47 |
| Msa0273710 | Msa0464500 | 0.805382 | 1.371615e-49 | -8.615850e-47 |
| Msa0273710 | Msa0466100 | 0.816468 | 5.445381e-52 | -8.615850e-47 |
| Msa0273710 | Msa0473320 | 0.812835 | 3.470946e-51 | -8.615850e-47 |
| Msa0273710 | Msa0473450 | 0.843000 | 1.833222e-58 | -8.615850e-47 |
| Msa0273710 | Msa0475830 | 0.808385 | 3.178974e-50 | -8.615850e-47 |
| Msa0273710 | Msa0509510 | 0.802401 | 5.710203e-49 | -8.615850e-47 |
| Msa0273710 | Msa0511890 | 0.823072 | 1.686131e-53 | -8.615850e-47 |
| Msa0273710 | Msa0517400 | 0.812805 | 3.524257e-51 | -8.615850e-47 |
| Msa0273710 | Msa0545910 | 0.854067 | 1.574924e-61 | -8.615850e-47 |
| Msa0273710 | Msa0558890 | 0.809252 | 2.073777e-50 | -8.615850e-47 |
| Msa0273710 | Msa0563650 | -0.827682 | 1.366980e-54 | -8.615850e-47 |
| Msa0273710 | Msa0568490 | 0.803228 | 3.853899e-49 | -8.615850e-47 |
| Msa0273710 | Msa0577140 | 0.821843 | 3.254462e-53 | -8.615850e-47 |
| Msa0273710 | Msa0587060 | 0.863735 | 2.012726e-64 | -8.615850e-47 |
| Msa0273710 | Msa0589440 | -0.802298 | 5.994963e-49 | -8.615850e-47 |
| Msa0273710 | Msa0595780 | 0.822341 | 2.494998e-53 | -8.615850e-47 |
| Msa0273710 | Msa0601710 | 0.862325 | 5.490388e-64 | -8.615850e-47 |
| Msa0273710 | Msa0606060 | 0.809412 | 1.916254e-50 | -8.615850e-47 |
| Msa0273710 | Msa0606680 | 0.807291 | 5.429410e-50 | -8.615850e-47 |
| Msa0273710 | Msa0619060 | 0.809181 | 2.148549e-50 | -8.615850e-47 |
| Msa0273710 | Msa0619480 | 0.816936 | 4.277286e-52 | -8.615850e-47 |
| Msa0273710 | Msa0622390 | 0.835301 | 1.817307e-56 | -8.615850e-47 |
| Msa0273710 | Msa0624890 | 0.852219 | 5.327370e-61 | -8.615850e-47 |
| Msa0273710 | Msa0626890 | 0.866433 | 2.860972e-65 | -8.615850e-47 |
| Msa0273710 | Msa0641970 | 0.808127 | 3.607688e-50 | -8.615850e-47 |
| Msa0273710 | Msa0653710 | 0.810337 | 1.212008e-50 | -8.615850e-47 |
| Msa0273710 | Msa0659130 | 0.800786 | 1.223795e-48 | -8.615850e-47 |
| Msa0273710 | Msa0659640 | 0.826425 | 2.732340e-54 | -8.615850e-47 |
| Msa0273710 | Msa0665010 | 0.835276 | 1.844140e-56 | -8.615850e-47 |
| Msa0273710 | Msa0681040 | 0.848582 | 5.590226e-60 | -8.615850e-47 |
| Msa0273710 | Msa0686610 | 0.808136 | 3.591583e-50 | -8.615850e-47 |
| Msa0273710 | Msa0698880 | 0.801469 | 8.872851e-49 | -8.615850e-47 |
| Msa0273710 | Msa0698900 | 0.804590 | 2.007743e-49 | -8.615850e-47 |
| Msa0273710 | Msa0704750 | 0.827692 | 1.359383e-54 | -8.615850e-47 |
| Msa0273710 | Msa0705610 | 0.815653 | 8.280563e-52 | -8.615850e-47 |
| Msa0273710 | Msa0706710 | 0.811775 | 5.915271e-51 | -8.615850e-47 |
| Msa0273710 | Msa0714020 | 0.819797 | 9.616175e-53 | -8.615850e-47 |
| Msa0273710 | Msa0714160 | 0.826011 | 3.428225e-54 | -8.615850e-47 |
| Msa0273710 | Msa0736330 | 0.839695 | 1.358360e-57 | -8.615850e-47 |
| Msa0273710 | Msa0736930 | 0.849920 | 2.372032e-60 | -8.615850e-47 |
| Msa0273710 | Msa0739570 | 0.805295 | 1.430059e-49 | -8.615850e-47 |
| Msa0273710 | Msa0739610 | 0.818021 | 2.435287e-52 | -8.615850e-47 |
| Msa0273710 | Msa0755590 | 0.800876 | 1.173290e-48 | -8.615850e-47 |
| Msa0273710 | Msa0757110 | 0.809045 | 2.297384e-50 | -8.615850e-47 |
| Msa0273710 | Msa0766880 | 0.818437 | 1.961205e-52 | -8.615850e-47 |
| Msa0273710 | Msa0778060 | 0.843442 | 1.397637e-58 | -8.615850e-47 |
| Msa0273710 | Msa0781900 | 0.805674 | 1.191302e-49 | -8.615850e-47 |
| Msa0273710 | Msa0782330 | 0.801621 | 8.260827e-49 | -8.615850e-47 |
| Msa0273710 | Msa0804930 | 0.836794 | 7.592466e-57 | -8.615850e-47 |
| Msa0273710 | Msa0821490 | 0.800108 | 1.682188e-48 | -8.615850e-47 |
| Msa0273710 | Msa0834160 | 0.812154 | 4.890245e-51 | -8.615850e-47 |
| Msa0273710 | Msa0836190 | 0.828953 | 6.749158e-55 | -8.615850e-47 |
| Msa0273710 | Msa0840570 | 0.803162 | 3.977023e-49 | -8.615850e-47 |
| Msa0273710 | Msa0855490 | 0.853400 | 2.450400e-61 | -8.615850e-47 |
| Msa0273710 | Msa0897390 | 0.804715 | 1.891349e-49 | -8.615850e-47 |
| Msa0273710 | Msa0978000 | 0.815014 | 1.148270e-51 | -8.615850e-47 |
| Msa0273710 | Msa0981300 | 0.824978 | 6.021379e-54 | -8.615850e-47 |
| Msa0273710 | Msa1024580 | 0.811354 | 7.301455e-51 | -8.615850e-47 |
| Msa0273710 | Msa1030280 | 0.845627 | 3.609109e-59 | -8.615850e-47 |
| Msa0273710 | Msa1031220 | 0.803154 | 3.992225e-49 | -8.615850e-47 |
| Msa0273710 | Msa1041620 | 0.804059 | 2.590706e-49 | -8.615850e-47 |
| Msa0273710 | Msa1042380 | 0.839399 | 1.621615e-57 | -8.615850e-47 |
| Msa0273710 | Msa1070200 | 0.835414 | 1.701356e-56 | -8.615850e-47 |
| Msa0273710 | Msa1070900 | 0.808150 | 3.568221e-50 | -8.615850e-47 |
| Msa0273710 | Msa1080770 | 0.813888 | 2.037547e-51 | -8.615850e-47 |
| Msa0273710 | Msa1118910 | 0.823705 | 1.199759e-53 | -8.615850e-47 |
| Msa0273710 | Msa1119620 | 0.802524 | 5.386902e-49 | -8.615850e-47 |
| Msa0273710 | Msa1125100 | 0.851673 | 7.613560e-61 | -8.615850e-47 |
| Msa0273710 | Msa1125150 | 0.855486 | 6.108824e-62 | -8.615850e-47 |
| Msa0273710 | Msa1157160 | 0.828259 | 9.929514e-55 | -8.615850e-47 |
| Msa0273710 | Msa1166520 | 0.816934 | 4.281642e-52 | -8.615850e-47 |
| Msa0273710 | Msa1168770 | 0.809928 | 1.485002e-50 | -8.615850e-47 |
| Msa0273710 | Msa1168840 | 0.830730 | 2.491429e-55 | -8.615850e-47 |
| Msa0273710 | Msa1173410 | 0.823512 | 1.331047e-53 | -8.615850e-47 |
| Msa0273710 | Msa1195860 | 0.857141 | 1.998105e-62 | -8.615850e-47 |
| Msa0273710 | Msa1199690 | 0.807374 | 5.216260e-50 | -8.615850e-47 |
| Msa0273710 | Msa1211100 | 0.811858 | 5.673872e-51 | -8.615850e-47 |
| Msa0273710 | Msa1211120 | 0.806490 | 8.021782e-50 | -8.615850e-47 |
| Msa0273710 | Msa1218720 | 0.809000 | 2.348291e-50 | -8.615850e-47 |
| Msa0273710 | Msa1221570 | -0.812470 | 4.172112e-51 | -8.615850e-47 |
| Msa0273710 | Msa1248400 | 0.838900 | 2.184850e-57 | -8.615850e-47 |
| Msa0273710 | Msa1264230 | 0.813055 | 3.106491e-51 | -8.615850e-47 |
| Msa0273710 | Msa1265250 | 0.824033 | 1.004892e-53 | -8.615850e-47 |
| Msa0273710 | Msa1289340 | 0.835108 | 2.033085e-56 | -8.615850e-47 |
| Msa0273710 | Msa1302920 | 0.843507 | 1.342926e-58 | -8.615850e-47 |
| Msa0273710 | Msa1309910 | 0.819061 | 1.415412e-52 | -8.615850e-47 |
| Msa0273710 | Msa1310260 | 0.804836 | 1.784001e-49 | -8.615850e-47 |
| Msa0273710 | Msa1325980 | 0.805662 | 1.198212e-49 | -8.615850e-47 |
| Msa0273710 | Msa1327820 | 0.836694 | 8.051936e-57 | -8.615850e-47 |
| Msa0273710 | Msa1351560 | 0.839959 | 1.159346e-57 | -8.615850e-47 |
| Msa0273710 | Msa1352820 | 0.844987 | 5.377320e-59 | -8.615850e-47 |
| Msa0273710 | Msa1368180 | 0.805243 | 1.466695e-49 | -8.615850e-47 |
| Msa0273710 | Msa1368730 | 0.800131 | 1.664606e-48 | -8.615850e-47 |
| Msa0273710 | Msa1370650 | 0.822645 | 2.119911e-53 | -8.615850e-47 |
| Msa0273710 | Msa1371250 | 0.816408 | 5.615220e-52 | -8.615850e-47 |
| Msa0273710 | Msa1374810 | 0.804465 | 2.132262e-49 | -8.615850e-47 |
| Msa0273710 | Msa1385940 | 0.861836 | 7.752748e-64 | -8.615850e-47 |
| Msa0273710 | Msa1388230 | 0.823783 | 1.150227e-53 | -8.615850e-47 |
| Msa0273710 | Msa1397540 | 0.828087 | 1.092405e-54 | -8.615850e-47 |
| Msa0273710 | Msa1400600 | 0.811931 | 5.468597e-51 | -8.615850e-47 |
| Msa0273710 | Msa1415120 | 0.817866 | 2.641035e-52 | -8.615850e-47 |
| Msa0273710 | Msa1435470 | 0.825760 | 3.931768e-54 | -8.615850e-47 |
| Msa0273710 | Msa1439160 | 0.802400 | 5.712859e-49 | -8.615850e-47 |
| Msa0273710 | Msa1442300 | 0.801103 | 1.054477e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273710 | MtrunA17_Chr2g0283911 | 94.183 | 447 | 25 | 1 | 1 | 447 | 1 | 446 | 0.0 | 810 |
| Msa0273710 | MtrunA17_Chr8g0379141 | 39.700 | 466 | 187 | 19 | 1 | 452 | 2 | 387 | 1.60e-63 | 214 |
| Msa0273710 | MtrunA17_Chr4g0041221 | 36.716 | 335 | 175 | 14 | 1 | 320 | 108 | 420 | 1.08e-45 | 169 |
| Msa0273710 | MtrunA17_Chr2g0325871 | 28.173 | 323 | 168 | 9 | 1 | 319 | 7 | 269 | 2.28e-21 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0273710 | AT1G29240.1 | 32.135 | 445 | 206 | 19 | 1 | 419 | 1 | 375 | 3.48e-36 | 140 |
| Msa0273710 | AT2G30990.4 | 33.033 | 333 | 166 | 13 | 1 | 318 | 8 | 298 | 7.86e-32 | 128 |
| Msa0273710 | AT2G30990.1 | 33.033 | 333 | 166 | 13 | 1 | 318 | 8 | 298 | 7.86e-32 | 128 |
| Msa0273710 | AT2G30990.5 | 33.033 | 333 | 166 | 13 | 1 | 318 | 8 | 298 | 7.86e-32 | 128 |
| Msa0273710 | AT2G30990.2 | 33.033 | 333 | 166 | 13 | 1 | 318 | 8 | 298 | 7.86e-32 | 128 |
| Msa0273710 | AT2G30990.3 | 30.539 | 334 | 143 | 12 | 1 | 318 | 8 | 268 | 2.06e-25 | 109 |
Find 158 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAAATTGTACCGATATTT+AGG | 0.155103 | 2_3:+5302525 | Msa0273710:five_prime_UTR |
| ATATACTAGTTGTTCAATTT+TGG | 0.171140 | 2_3:+5303487 | Msa0273710:five_prime_UTR |
| CAAGATTCAGAAGGCGATTT+TGG | 0.175148 | 2_3:-5305738 | None:intergenic |
| CTTCAAATTGCAAGGTTTAT+TGG | 0.181795 | 2_3:-5305209 | None:intergenic |
| CCTAAATATCGGTACAATTT+AGG | 0.229090 | 2_3:-5302525 | None:intergenic |
| TGCTTCATCTTCATATTCTT+TGG | 0.231607 | 2_3:-5305583 | None:intergenic |
| TCAAACAGGTTTGCTTATTC+AGG | 0.234374 | 2_3:+5305052 | Msa0273710:CDS |
| GGTATGAATTTCCTAGCTTA+TGG | 0.241349 | 2_3:+5306150 | Msa0273710:three_prime_UTR |
| TCCTGAATATGAACTTCTTA+TGG | 0.254530 | 2_3:-5305280 | None:intergenic |
| CTTCTTATGGTTCCTTGGTT+TGG | 0.266348 | 2_3:-5305267 | None:intergenic |
| TATGAAATATTAAGTTCTTT+AGG | 0.276345 | 2_3:+5305519 | Msa0273710:three_prime_UTR |
| GGCAATTCTACAACTTTATC+TGG | 0.287056 | 2_3:+5305543 | Msa0273710:three_prime_UTR |
| ATCTATTCTAACCGCGTTGC+CGG | 0.290201 | 2_3:-5303895 | None:intergenic |
| AGATCTAATACTAGATCTTT+TGG | 0.293809 | 2_3:-5304516 | None:intergenic |
| TATTCAGGTGAGTTGCTTCC+AGG | 0.295367 | 2_3:+5305067 | Msa0273710:CDS |
| CGCCTTCTGAATCTTGGCTT+TGG | 0.295509 | 2_3:+5305745 | Msa0273710:three_prime_UTR |
| GAATTCCTAACATGTAAATT+AGG | 0.295957 | 2_3:-5304407 | None:intergenic |
| CATAAAACATGTTGAAGCTT+TGG | 0.298028 | 2_3:+5305470 | Msa0273710:three_prime_UTR |
| GTGACTTTACTAGCATGTTT+TGG | 0.301554 | 2_3:+5306088 | Msa0273710:three_prime_UTR |
| TTCTTTCCTTCTTGTGTCTC+AGG | 0.305257 | 2_3:-5305013 | None:intergenic |
| TGTTACCTAATTTACATGTT+AGG | 0.307828 | 2_3:+5304402 | Msa0273710:CDS |
| CAAAATCGCCTTCTGAATCT+TGG | 0.309915 | 2_3:+5305739 | Msa0273710:three_prime_UTR |
| ACATGTTGAAGCTTTGGATT+TGG | 0.313661 | 2_3:+5305476 | Msa0273710:three_prime_UTR |
| CTATTACCTTTACATCTTCC+AGG | 0.316758 | 2_3:-5303714 | None:intergenic |
| CTGTTGCAGTGCCTTTCAAT+TGG | 0.325258 | 2_3:+5303682 | Msa0273710:CDS |
| GGTACAATTTAGGTGACTTT+TGG | 0.329682 | 2_3:-5302515 | None:intergenic |
| AATGCATGAAAGAATTCTTA+AGG | 0.332402 | 2_3:-5305788 | None:intergenic |
| AACCTTCTTCACATGCTATA+TGG | 0.336961 | 2_3:+5302797 | Msa0273710:five_prime_UTR |
| ACCATAAGAAGTTCATATTC+AGG | 0.337841 | 2_3:+5305279 | Msa0273710:exon |
| TAACACAATTTGCTTCTTGT+TGG | 0.338151 | 2_3:-5305685 | None:intergenic |
| GTGAATGAAGGGTGCTTAAC+AGG | 0.338479 | 2_3:-5303759 | None:intergenic |
| AACTTGGAAGCTAAGAAGTT+TGG | 0.342081 | 2_3:+5304095 | Msa0273710:CDS |
| ACCTTCTTTACAGCTGGAAT+TGG | 0.356365 | 2_3:-5304545 | None:intergenic |
| GAGTAGAAGGTCTTGTGTTA+AGG | 0.358792 | 2_3:+5303965 | Msa0273710:CDS |
| TCGTCGTTAACCCCTGTGGC+TGG | 0.361778 | 2_3:+5304434 | Msa0273710:CDS |
| GAATTCTTAAGGGAATTTAT+AGG | 0.365661 | 2_3:-5305777 | None:intergenic |
| AGAAACTATGACCGCAGAAT+TGG | 0.366394 | 2_3:+5305398 | Msa0273710:three_prime_UTR |
| AAGTTCATATTCAGGAAGTT+TGG | 0.370116 | 2_3:+5305287 | Msa0273710:three_prime_UTR |
| AAGCAAATTGTGTTAGCTAA+TGG | 0.371518 | 2_3:+5305693 | Msa0273710:three_prime_UTR |
| TCTTGACATTCCCCGGTATA+CGG | 0.373865 | 2_3:-5304305 | None:intergenic |
| TGTTGCAGTGCCTTTCAATT+GGG | 0.391757 | 2_3:+5303683 | Msa0273710:CDS |
| CCAGGAGGAAGCCTAGGAAT+TGG | 0.400075 | 2_3:-5303783 | None:intergenic |
| CAATTGAAAGGCACTGCAAC+AGG | 0.403772 | 2_3:-5303681 | None:intergenic |
| AAAAGCTGATTCCTCAAGAT+TGG | 0.404973 | 2_3:-5306282 | None:intergenic |
| AGAAGAAAATTGAGAGTAGA+AGG | 0.408210 | 2_3:+5303952 | Msa0273710:CDS |
| ATGAACTTCTTATGGTTCCT+TGG | 0.408592 | 2_3:-5305272 | None:intergenic |
| TCTTTCATGCATTCAAATCA+AGG | 0.415349 | 2_3:+5305798 | Msa0273710:three_prime_UTR |
| GATAATTCTGATAGTGTCTT+GGG | 0.420826 | 2_3:+5304365 | Msa0273710:CDS |
| CAGAAGAAGGCAAGGTAACT+TGG | 0.421503 | 2_3:-5304472 | None:intergenic |
| TTCTTCCTCTTGACATTCCC+CGG | 0.422420 | 2_3:-5304312 | None:intergenic |
| AGATTGTTGTCTACTTCTAC+AGG | 0.427835 | 2_3:-5305140 | None:intergenic |
| ATGCATGAAAGAATTCTTAA+GGG | 0.429740 | 2_3:-5305787 | None:intergenic |
| CAGGTAGACTCTCTCCCTTC+CGG | 0.433558 | 2_3:+5305086 | Msa0273710:CDS |
| CTTTCATCCTACTCATTCTA+CGG | 0.433768 | 2_3:+5302703 | Msa0273710:five_prime_UTR |
| CTTCATTATGAGTATCGAAA+AGG | 0.435326 | 2_3:-5306364 | None:intergenic |
| CTTCATTCACTCCAATTCCT+AGG | 0.436745 | 2_3:+5303772 | Msa0273710:CDS |
| AACGGTTGGTTGTTAAATGA+TGG | 0.447012 | 2_3:-5302726 | None:intergenic |
| GATGTGACTCACACAATAAA+CGG | 0.448558 | 2_3:-5302744 | None:intergenic |
| TGATAATTCTGATAGTGTCT+TGG | 0.459416 | 2_3:+5304364 | Msa0273710:CDS |
| GGAAGATGTAAAGGTAATAG+TGG | 0.463837 | 2_3:+5303717 | Msa0273710:CDS |
| TTCAATTGGGAGCATATACC+TGG | 0.463873 | 2_3:+5303696 | Msa0273710:CDS |
| ATCTTTCATCCCTAAAGAAA+AGG | 0.466401 | 2_3:+5306238 | Msa0273710:three_prime_UTR |
| CTTGCCTTCTTCTGCTTCTG+AGG | 0.469469 | 2_3:+5304481 | Msa0273710:CDS |
| AATTTGAAGTTCCACAGCTC+AGG | 0.470701 | 2_3:+5305223 | Msa0273710:CDS |
| TTGTGATAGAGAAAGAGAAA+AGG | 0.473028 | 2_3:+5303917 | Msa0273710:CDS |
| TCTGATAGTGTCTTGGGTAA+AGG | 0.474262 | 2_3:+5304371 | Msa0273710:CDS |
| CGTTCAAGAGCAGCCGCTGC+CGG | 0.475439 | 2_3:+5305109 | Msa0273710:CDS |
| AATGAGTAGGATGAAAGAAA+AGG | 0.475957 | 2_3:-5302697 | None:intergenic |
| GGTAAACCTTGTACAACATC+AGG | 0.481724 | 2_3:+5306451 | Msa0273710:three_prime_UTR |
| GCTAGTATAGTCTATAGAAA+AGG | 0.488563 | 2_3:-5302766 | None:intergenic |
| TCCAATTCCAGCTGTAAAGA+AGG | 0.488744 | 2_3:+5304544 | Msa0273710:CDS |
| TGTAAGTGGATTAGATAACT+TGG | 0.489622 | 2_3:+5304079 | Msa0273710:CDS |
| TTCATTATGAGTATCGAAAA+GGG | 0.489774 | 2_3:-5306363 | None:intergenic |
| TGTAGTGTGAGTGGTGTAAG+TGG | 0.490003 | 2_3:+5304065 | Msa0273710:CDS |
| TTCATCCCTAAAGAAAAGGT+TGG | 0.490062 | 2_3:+5306242 | Msa0273710:three_prime_UTR |
| GATGGAGCAGTGAATCAAAC+AGG | 0.494290 | 2_3:+5305038 | Msa0273710:CDS |
| CTTTCATGCATTCAAATCAA+GGG | 0.495053 | 2_3:+5305799 | Msa0273710:three_prime_UTR |
| CTGTGGAACTTCAAATTGCA+AGG | 0.495828 | 2_3:-5305217 | None:intergenic |
| AGCAAACTTGGTTACATGAA+TGG | 0.495844 | 2_3:-5302837 | None:intergenic |
| GAAATATGAAATTCTCATGT+TGG | 0.496138 | 2_3:+5306430 | Msa0273710:three_prime_UTR |
| CAGCGGCTGCTCTTGAACGC+CGG | 0.500453 | 2_3:-5305105 | None:intergenic |
| AGTGAATCTATTTGCAACGT+TGG | 0.501107 | 2_3:-5303847 | None:intergenic |
| AGGCTTGGGAAGCAATTCAT+AGG | 0.501472 | 2_3:+5304963 | Msa0273710:intron |
| TGCCACACAGCCATTGGTAA+AGG | 0.501688 | 2_3:+5303821 | Msa0273710:CDS |
| GGCTGCTCTTGAACGCCGGA+AGG | 0.503308 | 2_3:-5305101 | None:intergenic |
| CGGAAGGGAGAGAGTCTACC+TGG | 0.503457 | 2_3:-5305085 | None:intergenic |
| ATTAGTCCTGATGTTGTACA+AGG | 0.505244 | 2_3:-5306457 | None:intergenic |
| CTGATATTATACCGTATACC+GGG | 0.505451 | 2_3:+5304294 | Msa0273710:CDS |
| CTAGGAATTGGAGTGAATGA+AGG | 0.509197 | 2_3:-5303771 | None:intergenic |
| AGCAACTTTGTGCCACGAAA+GGG | 0.510405 | 2_3:-5305163 | None:intergenic |
| AACAAATCTAAGTCTTTCAC+CGG | 0.510412 | 2_3:+5303876 | Msa0273710:CDS |
| TCTTAAGGGAATTTATAGGC+AGG | 0.510829 | 2_3:-5305773 | None:intergenic |
| CATATACCTGGAAGATGTAA+AGG | 0.513574 | 2_3:+5303708 | Msa0273710:CDS |
| CCAATTCCTAGGCTTCCTCC+TGG | 0.515401 | 2_3:+5303783 | Msa0273710:CDS |
| CAAATCTGCCACACAGCCAT+TGG | 0.523138 | 2_3:+5303815 | Msa0273710:CDS |
| TGGTCATGTTCGCTATTCTC+AGG | 0.524240 | 2_3:+5305911 | Msa0273710:three_prime_UTR |
| AGTGTCTTGGGTAAAGGATG+TGG | 0.525231 | 2_3:+5304377 | Msa0273710:CDS |
| CTTTGAGCTTGTGATTGAGA+GGG | 0.526182 | 2_3:+5303449 | Msa0273710:five_prime_UTR |
| CACAAGAAGGAAAGAAGAGA+TGG | 0.527187 | 2_3:+5305020 | Msa0273710:CDS |
| GACCATATAGCATGTGAAGA+AGG | 0.530750 | 2_3:-5302799 | None:intergenic |
| TTCTTTGACTCTGTTAGCGA+AGG | 0.532241 | 2_3:-5303588 | None:intergenic |
| CTATAGACTATACTAGCTGC+TGG | 0.532448 | 2_3:+5302772 | Msa0273710:five_prime_UTR |
| ACTGATATTATACCGTATAC+CGG | 0.534931 | 2_3:+5304293 | Msa0273710:CDS |
| AGACAACAATCTCCCTTTCG+TGG | 0.538538 | 2_3:+5305151 | Msa0273710:CDS |
| CGTCGTTAACCCCTGTGGCT+GGG | 0.541305 | 2_3:+5304435 | Msa0273710:CDS |
| GTTGCACTGACACGAGTTCA+CGG | 0.542673 | 2_3:-5305629 | None:intergenic |
| ACCTAGAGATGTTAACAAGT+TGG | 0.543738 | 2_3:+5304244 | Msa0273710:CDS |
| TGCTGTTCCACTAATACAGA+TGG | 0.550161 | 2_3:-5304221 | None:intergenic |
| TTTGGCAATGGTGGTTGAAG+TGG | 0.552216 | 2_3:-5305720 | None:intergenic |
| AAGGTAAAATTCCATAAGCT+AGG | 0.552573 | 2_3:-5306161 | None:intergenic |
| CTCAGAAGCAGAAGAAGGCA+AGG | 0.554216 | 2_3:-5304480 | None:intergenic |
| GAGGAAGAAAGTGAAGATGA+AGG | 0.554931 | 2_3:+5304326 | Msa0273710:CDS |
| ACTTTGAGCTTGTGATTGAG+AGG | 0.555948 | 2_3:+5303448 | Msa0273710:five_prime_UTR |
| ACGTTGGATTCCTTTACCAA+TGG | 0.557062 | 2_3:-5303831 | None:intergenic |
| TTTCGTGGCACAAAGTTGCT+CGG | 0.559786 | 2_3:+5305166 | Msa0273710:CDS |
| ACAACCTCAGAAGCAGAAGA+AGG | 0.563800 | 2_3:-5304485 | None:intergenic |
| ATATTCAGGAAGTTTGGCAA+TGG | 0.563810 | 2_3:+5305293 | Msa0273710:three_prime_UTR |
| GGGTGCTTAACAGGAATTTG+AGG | 0.564398 | 2_3:-5303750 | None:intergenic |
| ACTTCTACAGGGAGATATAC+CGG | 0.565280 | 2_3:-5305128 | None:intergenic |
| CTTAAGGGAATTTATAGGCA+GGG | 0.568652 | 2_3:-5305772 | None:intergenic |
| GAAATATTAAGTTCTTTAGG+TGG | 0.570557 | 2_3:+5305522 | Msa0273710:three_prime_UTR |
| TTACAAATCAGAAATGTCGT+TGG | 0.571299 | 2_3:+5303644 | Msa0273710:CDS |
| GCTGCTCTTGAACGCCGGAA+GGG | 0.571777 | 2_3:-5305100 | None:intergenic |
| ACCAACTTGTTAACATCTCT+AGG | 0.572917 | 2_3:-5304245 | None:intergenic |
| ATTAATATCATCCAATCTTG+AGG | 0.575175 | 2_3:+5306271 | Msa0273710:three_prime_UTR |
| TCATAGGAACAAGTCAAGTA+CGG | 0.579635 | 2_3:+5304979 | Msa0273710:CDS |
| TTCATGCAGGAACTACAGGC+TGG | 0.582455 | 2_3:+5306028 | Msa0273710:intron |
| AAAACTTCAAATTTGCAGCA+TGG | 0.585819 | 2_3:+5305891 | Msa0273710:three_prime_UTR |
| GAAAGGCACTGCAACAGGCT+CGG | 0.585855 | 2_3:-5303676 | None:intergenic |
| GAGCAACTTTGTGCCACGAA+AGG | 0.587284 | 2_3:-5305164 | None:intergenic |
| TCAGAATGCAAAGAAGCCAT+TGG | 0.587399 | 2_3:+5304268 | Msa0273710:CDS |
| TCTTTGAACTGTAGTGTGAG+TGG | 0.589323 | 2_3:+5304056 | Msa0273710:CDS |
| ATCATCAAGCAATGTCAAGT+GGG | 0.592931 | 2_3:+5305857 | Msa0273710:three_prime_UTR |
| TATCATCAAGCAATGTCAAG+TGG | 0.593140 | 2_3:+5305856 | Msa0273710:three_prime_UTR |
| TGAATGGAGAAAATGATGAA+AGG | 0.593390 | 2_3:-5302821 | None:intergenic |
| GGAAATTCATACCATATGCA+TGG | 0.594826 | 2_3:-5306140 | None:intergenic |
| GGTATATGCTCCCAATTGAA+AGG | 0.603809 | 2_3:-5303693 | None:intergenic |
| GCAGAATTGGACAAAAGAAG+AGG | 0.606080 | 2_3:+5305411 | Msa0273710:three_prime_UTR |
| CAGAATTGGACAAAAGAAGA+GGG | 0.608851 | 2_3:+5305412 | Msa0273710:three_prime_UTR |
| TAGGAATTGGAGTGAATGAA+GGG | 0.609667 | 2_3:-5303770 | None:intergenic |
| TGACTCACACAATAAACGGT+TGG | 0.614738 | 2_3:-5302740 | None:intergenic |
| CGCCAAAGCCAAGATTCAGA+AGG | 0.617248 | 2_3:-5305747 | None:intergenic |
| TTTCGTCTCACTGACATGAG+TGG | 0.617379 | 2_3:-5303552 | None:intergenic |
| AACATACCTCTTGAATAACT+CGG | 0.620063 | 2_3:-5302886 | None:intergenic |
| ACAGGGAGATATACCGGCAG+CGG | 0.622172 | 2_3:-5305122 | None:intergenic |
| TTCCTTTACCAATGGCTGTG+TGG | 0.635764 | 2_3:-5303823 | None:intergenic |
| GCATCACCTGAGACACAAGA+AGG | 0.635937 | 2_3:+5305007 | Msa0273710:CDS |
| ATTGTCGTCGTTAACCCCTG+TGG | 0.643621 | 2_3:+5304430 | Msa0273710:CDS |
| GGTATAATATCAGTTACCAA+TGG | 0.649426 | 2_3:-5304284 | None:intergenic |
| TAGATACCGAGTTATTCAAG+AGG | 0.655257 | 2_3:+5302880 | Msa0273710:five_prime_UTR |
| TGACTTGTAAAACTCTGACT+CGG | 0.655474 | 2_3:-5302565 | None:intergenic |
| TTTGGAACAAGATGTCTGAG+AGG | 0.657365 | 2_3:+5303511 | Msa0273710:exon |
| GTATACCGGGGAATGTCAAG+AGG | 0.660002 | 2_3:+5304307 | Msa0273710:CDS |
| ATTCAAGGAGTTCCAAACCA+AGG | 0.669302 | 2_3:+5305255 | Msa0273710:CDS |
| GATTGTTGTCTACTTCTACA+GGG | 0.670105 | 2_3:-5305139 | None:intergenic |
| ATGATGGCCGTAGAATGAGT+AGG | 0.682669 | 2_3:-5302710 | None:intergenic |
| TAAGTCTTTCACCGGCAACG+CGG | 0.704050 | 2_3:+5303884 | Msa0273710:CDS |
| TGATATTATACCGTATACCG+GGG | 0.709019 | 2_3:+5304295 | Msa0273710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAGTATTATATCTT+TGG | + | chr2_3:5302931-5302950 | Msa0273710:intron | 10.0% |
| !!! | AATATTTTATTCATTGATTG+TGG | + | chr2_3:5303010-5303029 | Msa0273710:intron | 15.0% |
| !! | AATATTATATAGTTTCTTTC+AGG | + | chr2_3:5303070-5303089 | Msa0273710:intron | 15.0% |
| !! | TATGAAATATTAAGTTCTTT+AGG | + | chr2_3:5305519-5305538 | Msa0273710:three_prime_UTR | 15.0% |
| !!! | TTTTAGTATTATATCTTTGG+TGG | + | chr2_3:5302934-5302953 | Msa0273710:intron | 20.0% |
| !! | TTTAGTATTATATCTTTGGT+GGG | + | chr2_3:5302935-5302954 | Msa0273710:intron | 20.0% |
| !! | TGAAAATCTGAAAAATACAA+AGG | - | chr2_3:5303354-5303373 | None:intergenic | 20.0% |
| !!! | ATTTTTCAGATTTTCATGAT+TGG | + | chr2_3:5303358-5303377 | Msa0273710:intron | 20.0% |
| !!! | ATATACTAGTTGTTCAATTT+TGG | + | chr2_3:5303487-5303506 | Msa0273710:five_prime_UTR | 20.0% |
| !!! | TTTTTTGAAGAATATTGAGA+AGG | - | chr2_3:5304200-5304219 | None:intergenic | 20.0% |
| !!! | AATTTTACCTTTTATAGCAT+TGG | + | chr2_3:5306173-5306192 | Msa0273710:three_prime_UTR | 20.0% |
| !!! | ATTTTTACCAATGCTATAAA+AGG | - | chr2_3:5306183-5306202 | None:intergenic | 20.0% |
| !!! | CTCTTTTTAGTCCTAAATAT+CGG | - | chr2_3:5302539-5302558 | None:intergenic | 25.0% |
| !! | TATCCATTTAGCTTAAATCA+TGG | + | chr2_3:5303116-5303135 | Msa0273710:intron | 25.0% |
| ! | TATCACAAGTTGTTAAACTT+TGG | - | chr2_3:5303162-5303181 | None:intergenic | 25.0% |
| ! | GTTTAATTCTTCTCTTGTTA+TGG | + | chr2_3:5303206-5303225 | Msa0273710:intron | 25.0% |
| ! | ATACAAAGGAATTTAAGAAC+TGG | - | chr2_3:5303340-5303359 | None:intergenic | 25.0% |
| !!! | ATACCTGATTTTTTAAGCAT+TGG | + | chr2_3:5303393-5303412 | Msa0273710:five_prime_UTR | 25.0% |
| !! | TAGTTGTTCAATTTTGGATT+TGG | + | chr2_3:5303493-5303512 | Msa0273710:five_prime_UTR | 25.0% |
| ! | TGTTACCTAATTTACATGTT+AGG | + | chr2_3:5304402-5304421 | Msa0273710:CDS | 25.0% |
| ! | GAATTCCTAACATGTAAATT+AGG | - | chr2_3:5304410-5304429 | None:intergenic | 25.0% |
| !! | AGATCTAATACTAGATCTTT+TGG | - | chr2_3:5304519-5304538 | None:intergenic | 25.0% |
| !!! | ACAATTGATTTTGACATGTT+TGG | + | chr2_3:5304636-5304655 | Msa0273710:intron | 25.0% |
| ! | TAAGATAGAATCAATTCTGA+AGG | - | chr2_3:5304687-5304706 | None:intergenic | 25.0% |
| !!! | AAAATCTACTTTTGTCACAA+CGG | + | chr2_3:5304842-5304861 | Msa0273710:intron | 25.0% |
| !! | AAAGGATTAAGGATTTGTTT+GGG | - | chr2_3:5304869-5304888 | None:intergenic | 25.0% |
| !! | AAAAGGATTAAGGATTTGTT+TGG | - | chr2_3:5304870-5304889 | None:intergenic | 25.0% |
| ! | TGATCAACAAAAAAGGATTA+AGG | - | chr2_3:5304880-5304899 | None:intergenic | 25.0% |
| ! | GAAATATTAAGTTCTTTAGG+TGG | + | chr2_3:5305522-5305541 | Msa0273710:three_prime_UTR | 25.0% |
| ! | GAATTCTTAAGGGAATTTAT+AGG | - | chr2_3:5305780-5305799 | None:intergenic | 25.0% |
| ! | ATGCATGAAAGAATTCTTAA+GGG | - | chr2_3:5305790-5305809 | None:intergenic | 25.0% |
| ! | AATGCATGAAAGAATTCTTA+AGG | - | chr2_3:5305791-5305810 | None:intergenic | 25.0% |
| ! | TATGGACAAAGGAATTAAAA+AGG | - | chr2_3:5305940-5305959 | None:intergenic | 25.0% |
| ! | GTCTTATATAGGCAAAATTA+TGG | - | chr2_3:5305958-5305977 | None:intergenic | 25.0% |
| ! | ATTAATATCATCCAATCTTG+AGG | + | chr2_3:5306271-5306290 | Msa0273710:three_prime_UTR | 25.0% |
| !!! | TTCATTATGAGTATCGAAAA+GGG | - | chr2_3:5306366-5306385 | None:intergenic | 25.0% |
| ! | GAAATATGAAATTCTCATGT+TGG | + | chr2_3:5306430-5306449 | Msa0273710:three_prime_UTR | 25.0% |
| CCTAAATATCGGTACAATTT+AGG | - | chr2_3:5302528-5302547 | None:intergenic | 30.0% | |
| ! | CCTAAATTGTACCGATATTT+AGG | + | chr2_3:5302525-5302544 | Msa0273710:five_prime_UTR | 30.0% |
| ! | CGATATTTAGGACTAAAAAG+AGG | + | chr2_3:5302537-5302556 | Msa0273710:five_prime_UTR | 30.0% |
| AAAAGGCAATAAAAAGCTGA+GGG | - | chr2_3:5302683-5302702 | None:intergenic | 30.0% | |
| AATGAGTAGGATGAAAGAAA+AGG | - | chr2_3:5302700-5302719 | None:intergenic | 30.0% | |
| GCTAGTATAGTCTATAGAAA+AGG | - | chr2_3:5302769-5302788 | None:intergenic | 30.0% | |
| TGAATGGAGAAAATGATGAA+AGG | - | chr2_3:5302824-5302843 | None:intergenic | 30.0% | |
| !! | ATGTTTTTGTGAAGCAAACT+TGG | - | chr2_3:5302852-5302871 | None:intergenic | 30.0% |
| AACATACCTCTTGAATAACT+CGG | - | chr2_3:5302889-5302908 | None:intergenic | 30.0% | |
| ! | CATCACATGCAAAATTTTCA+TGG | - | chr2_3:5302962-5302981 | None:intergenic | 30.0% |
| TCTTTCAGGAGAGAAAATAT+AGG | + | chr2_3:5303084-5303103 | Msa0273710:intron | 30.0% | |
| ! | AGAGAAAATATAGGCTTTTG+AGG | + | chr2_3:5303093-5303112 | Msa0273710:intron | 30.0% |
| AAGCCATGATTTAAGCTAAA+TGG | - | chr2_3:5303122-5303141 | None:intergenic | 30.0% | |
| TTACAAATCAGAAATGTCGT+TGG | + | chr2_3:5303644-5303663 | Msa0273710:CDS | 30.0% | |
| AACAAATCTAAGTCTTTCAC+CGG | + | chr2_3:5303876-5303895 | Msa0273710:CDS | 30.0% | |
| TTGTGATAGAGAAAGAGAAA+AGG | + | chr2_3:5303917-5303936 | Msa0273710:CDS | 30.0% | |
| AGAAGAAAATTGAGAGTAGA+AGG | + | chr2_3:5303952-5303971 | Msa0273710:CDS | 30.0% | |
| !! | TGTAAGTGGATTAGATAACT+TGG | + | chr2_3:5304079-5304098 | Msa0273710:CDS | 30.0% |
| ! | TTGTATTGTCATAGCTTTTG+CGG | - | chr2_3:5304177-5304196 | None:intergenic | 30.0% |
| AAAAAAGCCATCTGTATTAG+TGG | + | chr2_3:5304214-5304233 | Msa0273710:CDS | 30.0% | |
| GGTATAATATCAGTTACCAA+TGG | - | chr2_3:5304287-5304306 | None:intergenic | 30.0% | |
| ACTGATATTATACCGTATAC+CGG | + | chr2_3:5304293-5304312 | Msa0273710:CDS | 30.0% | |
| ! | TGATAATTCTGATAGTGTCT+TGG | + | chr2_3:5304364-5304383 | Msa0273710:CDS | 30.0% |
| ! | GATAATTCTGATAGTGTCTT+GGG | + | chr2_3:5304365-5304384 | Msa0273710:CDS | 30.0% |
| ! | CTAATACTAGATCTTTTGGT+AGG | - | chr2_3:5304515-5304534 | None:intergenic | 30.0% |
| !!! | TTTTTTACCTTCTTTACAGC+TGG | - | chr2_3:5304554-5304573 | None:intergenic | 30.0% |
| ! | ACACCTCTTGTAACAATTTT+TGG | - | chr2_3:5304616-5304635 | None:intergenic | 30.0% |
| ATGTTTGGATATTCTCAAGT+AGG | + | chr2_3:5304651-5304670 | Msa0273710:intron | 30.0% | |
| AAAGCTAGAATTTGTAGCTT+TGG | + | chr2_3:5304706-5304725 | Msa0273710:intron | 30.0% | |
| TGGATACTTTCATGTAAAAG+TGG | - | chr2_3:5304772-5304791 | None:intergenic | 30.0% | |
| AATGTAAAGTGATGTACGTT+TGG | - | chr2_3:5304792-5304811 | None:intergenic | 30.0% | |
| ! | AAGGATTAAGGATTTGTTTG+GGG | - | chr2_3:5304868-5304887 | None:intergenic | 30.0% |
| AGGATGTTGATCAACAAAAA+AGG | - | chr2_3:5304887-5304906 | None:intergenic | 30.0% | |
| CTTCAAATTGCAAGGTTTAT+TGG | - | chr2_3:5305212-5305231 | None:intergenic | 30.0% | |
| ACCATAAGAAGTTCATATTC+AGG | + | chr2_3:5305279-5305298 | Msa0273710:exon | 30.0% | |
| TCCTGAATATGAACTTCTTA+TGG | - | chr2_3:5305283-5305302 | None:intergenic | 30.0% | |
| AAGTTCATATTCAGGAAGTT+TGG | + | chr2_3:5305287-5305306 | Msa0273710:three_prime_UTR | 30.0% | |
| GTTCTGTAGATATCAAAAAG+AGG | + | chr2_3:5305373-5305392 | Msa0273710:three_prime_UTR | 30.0% | |
| CATAAAACATGTTGAAGCTT+TGG | + | chr2_3:5305470-5305489 | Msa0273710:three_prime_UTR | 30.0% | |
| TTTGGAAGAAAAAGTCACAT+TGG | + | chr2_3:5305494-5305513 | Msa0273710:three_prime_UTR | 30.0% | |
| TGCTTCATCTTCATATTCTT+TGG | - | chr2_3:5305586-5305605 | None:intergenic | 30.0% | |
| ! | TAACACAATTTGCTTCTTGT+TGG | - | chr2_3:5305688-5305707 | None:intergenic | 30.0% |
| AAGCAAATTGTGTTAGCTAA+TGG | + | chr2_3:5305693-5305712 | Msa0273710:three_prime_UTR | 30.0% | |
| TCTTTCATGCATTCAAATCA+AGG | + | chr2_3:5305798-5305817 | Msa0273710:three_prime_UTR | 30.0% | |
| CTTTCATGCATTCAAATCAA+GGG | + | chr2_3:5305799-5305818 | Msa0273710:three_prime_UTR | 30.0% | |
| AAAACTTCAAATTTGCAGCA+TGG | + | chr2_3:5305891-5305910 | Msa0273710:three_prime_UTR | 30.0% | |
| ATAGGCAAAATTATGGACAA+AGG | - | chr2_3:5305951-5305970 | None:intergenic | 30.0% | |
| !! | GAGTTGATGTAGTCTTATAT+AGG | - | chr2_3:5305969-5305988 | None:intergenic | 30.0% |
| !! | TTCACATTTACTTTTCATGC+AGG | + | chr2_3:5306015-5306034 | Msa0273710:intron | 30.0% |
| AAACAAGGAGACAAAAAACT+TGG | - | chr2_3:5306115-5306134 | None:intergenic | 30.0% | |
| ATATGCATGGTGAAAAAACA+AGG | - | chr2_3:5306130-5306149 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTTCACCATGCATA+TGG | + | chr2_3:5306129-5306148 | Msa0273710:three_prime_UTR | 30.0% |
| AAGGTAAAATTCCATAAGCT+AGG | - | chr2_3:5306164-5306183 | None:intergenic | 30.0% | |
| ATCTTTCATCCCTAAAGAAA+AGG | + | chr2_3:5306238-5306257 | Msa0273710:three_prime_UTR | 30.0% | |
| ! | TGAATCCAACCTTTTCTTTA+GGG | - | chr2_3:5306250-5306269 | None:intergenic | 30.0% |
| ! | ATGAATCCAACCTTTTCTTT+AGG | - | chr2_3:5306251-5306270 | None:intergenic | 30.0% |
| !! | CTTCATTATGAGTATCGAAA+AGG | - | chr2_3:5306367-5306386 | None:intergenic | 30.0% |
| ! | CTTTTCGATACTCATAATGA+AGG | + | chr2_3:5306365-5306384 | Msa0273710:three_prime_UTR | 30.0% |
| ! | GGTACAATTTAGGTGACTTT+TGG | - | chr2_3:5302518-5302537 | None:intergenic | 35.0% |
| ! | TGACTTGTAAAACTCTGACT+CGG | - | chr2_3:5302568-5302587 | None:intergenic | 35.0% |
| GAAAAGGCAATAAAAAGCTG+AGG | - | chr2_3:5302684-5302703 | None:intergenic | 35.0% | |
| CTTTCATCCTACTCATTCTA+CGG | + | chr2_3:5302703-5302722 | Msa0273710:five_prime_UTR | 35.0% | |
| ! | AACGGTTGGTTGTTAAATGA+TGG | - | chr2_3:5302729-5302748 | None:intergenic | 35.0% |
| GATGTGACTCACACAATAAA+CGG | - | chr2_3:5302747-5302766 | None:intergenic | 35.0% | |
| AACCTTCTTCACATGCTATA+TGG | + | chr2_3:5302797-5302816 | Msa0273710:five_prime_UTR | 35.0% | |
| AGCAAACTTGGTTACATGAA+TGG | - | chr2_3:5302840-5302859 | None:intergenic | 35.0% | |
| TAGATACCGAGTTATTCAAG+AGG | + | chr2_3:5302880-5302899 | Msa0273710:five_prime_UTR | 35.0% | |
| GCACCAATGCTTAAAAAATC+AGG | - | chr2_3:5303399-5303418 | None:intergenic | 35.0% | |
| CATATACCTGGAAGATGTAA+AGG | + | chr2_3:5303708-5303727 | Msa0273710:CDS | 35.0% | |
| CTATTACCTTTACATCTTCC+AGG | - | chr2_3:5303717-5303736 | None:intergenic | 35.0% | |
| GGAAGATGTAAAGGTAATAG+TGG | + | chr2_3:5303717-5303736 | Msa0273710:CDS | 35.0% | |
| TAGGAATTGGAGTGAATGAA+GGG | - | chr2_3:5303773-5303792 | None:intergenic | 35.0% | |
| AGTGAATCTATTTGCAACGT+TGG | - | chr2_3:5303850-5303869 | None:intergenic | 35.0% | |
| AACTTGGAAGCTAAGAAGTT+TGG | + | chr2_3:5304095-5304114 | Msa0273710:CDS | 35.0% | |
| ACCTAGAGATGTTAACAAGT+TGG | + | chr2_3:5304244-5304263 | Msa0273710:CDS | 35.0% | |
| !! | ACCAACTTGTTAACATCTCT+AGG | - | chr2_3:5304248-5304267 | None:intergenic | 35.0% |
| CTGATATTATACCGTATACC+GGG | + | chr2_3:5304294-5304313 | Msa0273710:CDS | 35.0% | |
| TGATATTATACCGTATACCG+GGG | + | chr2_3:5304295-5304314 | Msa0273710:CDS | 35.0% | |
| ! | TGTATGTTTGATTTCGCATG+TGG | + | chr2_3:5304585-5304604 | Msa0273710:intron | 35.0% |
| GAGCCAAAAATTGTTACAAG+AGG | + | chr2_3:5304610-5304629 | Msa0273710:intron | 35.0% | |
| CGAAAACATGTTCATTCATG+AGG | - | chr2_3:5304907-5304926 | None:intergenic | 35.0% | |
| ! | TGATGATGAATCTTTGATGC+AGG | + | chr2_3:5304943-5304962 | Msa0273710:intron | 35.0% |
| TCATAGGAACAAGTCAAGTA+CGG | + | chr2_3:5304979-5304998 | Msa0273710:CDS | 35.0% | |
| ! | TCAAACAGGTTTGCTTATTC+AGG | + | chr2_3:5305052-5305071 | Msa0273710:CDS | 35.0% |
| GATTGTTGTCTACTTCTACA+GGG | - | chr2_3:5305142-5305161 | None:intergenic | 35.0% | |
| AGATTGTTGTCTACTTCTAC+AGG | - | chr2_3:5305143-5305162 | None:intergenic | 35.0% | |
| CTCAGGACTTGAAAAATTCA+AGG | + | chr2_3:5305240-5305259 | Msa0273710:CDS | 35.0% | |
| ATGAACTTCTTATGGTTCCT+TGG | - | chr2_3:5305275-5305294 | None:intergenic | 35.0% | |
| ATATTCAGGAAGTTTGGCAA+TGG | + | chr2_3:5305293-5305312 | Msa0273710:three_prime_UTR | 35.0% | |
| ! | TCTTCTTTTGTCCAATTCTG+CGG | - | chr2_3:5305412-5305431 | None:intergenic | 35.0% |
| CAGAATTGGACAAAAGAAGA+GGG | + | chr2_3:5305412-5305431 | Msa0273710:three_prime_UTR | 35.0% | |
| !! | ACATGTTGAAGCTTTGGATT+TGG | + | chr2_3:5305476-5305495 | Msa0273710:three_prime_UTR | 35.0% |
| GGCAATTCTACAACTTTATC+TGG | + | chr2_3:5305543-5305562 | Msa0273710:three_prime_UTR | 35.0% | |
| ! | TCAGAAAAAGTCTTTTGCAC+TGG | - | chr2_3:5305654-5305673 | None:intergenic | 35.0% |
| CTTAAGGGAATTTATAGGCA+GGG | - | chr2_3:5305775-5305794 | None:intergenic | 35.0% | |
| TCTTAAGGGAATTTATAGGC+AGG | - | chr2_3:5305776-5305795 | None:intergenic | 35.0% | |
| TATCATCAAGCAATGTCAAG+TGG | + | chr2_3:5305856-5305875 | Msa0273710:three_prime_UTR | 35.0% | |
| ATCATCAAGCAATGTCAAGT+GGG | + | chr2_3:5305857-5305876 | Msa0273710:three_prime_UTR | 35.0% | |
| AGACTACATCAACTCAACTA+TGG | + | chr2_3:5305974-5305993 | Msa0273710:intron | 35.0% | |
| ! | GTGACTTTACTAGCATGTTT+TGG | + | chr2_3:5306088-5306107 | Msa0273710:three_prime_UTR | 35.0% |
| GGAAATTCATACCATATGCA+TGG | - | chr2_3:5306143-5306162 | None:intergenic | 35.0% | |
| GGTATGAATTTCCTAGCTTA+TGG | + | chr2_3:5306150-5306169 | Msa0273710:three_prime_UTR | 35.0% | |
| TTCATCCCTAAAGAAAAGGT+TGG | + | chr2_3:5306242-5306261 | Msa0273710:three_prime_UTR | 35.0% | |
| ! | AAAAGCTGATTCCTCAAGAT+TGG | - | chr2_3:5306285-5306304 | None:intergenic | 35.0% |
| ATTAGTCCTGATGTTGTACA+AGG | - | chr2_3:5306460-5306479 | None:intergenic | 35.0% | |
| TGACTCACACAATAAACGGT+TGG | - | chr2_3:5302743-5302762 | None:intergenic | 40.0% | |
| CTATAGACTATACTAGCTGC+TGG | + | chr2_3:5302772-5302791 | Msa0273710:five_prime_UTR | 40.0% | |
| GACCATATAGCATGTGAAGA+AGG | - | chr2_3:5302802-5302821 | None:intergenic | 40.0% | |
| ATGTTCATGAACATGCTCAC+TGG | + | chr2_3:5302979-5302998 | Msa0273710:intron | 40.0% | |
| ACTTTGAGCTTGTGATTGAG+AGG | + | chr2_3:5303448-5303467 | Msa0273710:five_prime_UTR | 40.0% | |
| CTTTGAGCTTGTGATTGAGA+GGG | + | chr2_3:5303449-5303468 | Msa0273710:five_prime_UTR | 40.0% | |
| ! | TTTGGAACAAGATGTCTGAG+AGG | + | chr2_3:5303511-5303530 | Msa0273710:exon | 40.0% |
| TTCTTTGACTCTGTTAGCGA+AGG | - | chr2_3:5303591-5303610 | None:intergenic | 40.0% | |
| TGTTGCAGTGCCTTTCAATT+GGG | + | chr2_3:5303683-5303702 | Msa0273710:CDS | 40.0% | |
| GGTATATGCTCCCAATTGAA+AGG | - | chr2_3:5303696-5303715 | None:intergenic | 40.0% | |
| ! | TTCAATTGGGAGCATATACC+TGG | + | chr2_3:5303696-5303715 | Msa0273710:CDS | 40.0% |
| CTAGGAATTGGAGTGAATGA+AGG | - | chr2_3:5303774-5303793 | None:intergenic | 40.0% | |
| CTTCATTCACTCCAATTCCT+AGG | + | chr2_3:5303772-5303791 | Msa0273710:CDS | 40.0% | |
| !! | GATTTGACTGATTTTCCAGG+AGG | - | chr2_3:5303801-5303820 | None:intergenic | 40.0% |
| !! | GCAGATTTGACTGATTTTCC+AGG | - | chr2_3:5303804-5303823 | None:intergenic | 40.0% |
| ACGTTGGATTCCTTTACCAA+TGG | - | chr2_3:5303834-5303853 | None:intergenic | 40.0% | |
| ! | GAGTAGAAGGTCTTGTGTTA+AGG | + | chr2_3:5303965-5303984 | Msa0273710:CDS | 40.0% |
| TCTTTGAACTGTAGTGTGAG+TGG | + | chr2_3:5304056-5304075 | Msa0273710:CDS | 40.0% | |
| TGCTGTTCCACTAATACAGA+TGG | - | chr2_3:5304224-5304243 | None:intergenic | 40.0% | |
| TCAGAATGCAAAGAAGCCAT+TGG | + | chr2_3:5304268-5304287 | Msa0273710:CDS | 40.0% | |
| GAGGAAGAAAGTGAAGATGA+AGG | + | chr2_3:5304326-5304345 | Msa0273710:CDS | 40.0% | |
| ! | TCTGATAGTGTCTTGGGTAA+AGG | + | chr2_3:5304371-5304390 | Msa0273710:CDS | 40.0% |
| TCCAATTCCAGCTGTAAAGA+AGG | + | chr2_3:5304544-5304563 | Msa0273710:CDS | 40.0% | |
| ACCTTCTTTACAGCTGGAAT+TGG | - | chr2_3:5304548-5304567 | None:intergenic | 40.0% | |
| ATGAATCTTTGATGCAGGCT+TGG | + | chr2_3:5304948-5304967 | Msa0273710:intron | 40.0% | |
| TGAATCTTTGATGCAGGCTT+GGG | + | chr2_3:5304949-5304968 | Msa0273710:intron | 40.0% | |
| TTCTTTCCTTCTTGTGTCTC+AGG | - | chr2_3:5305016-5305035 | None:intergenic | 40.0% | |
| CACAAGAAGGAAAGAAGAGA+TGG | + | chr2_3:5305020-5305039 | Msa0273710:CDS | 40.0% | |
| ACTTCTACAGGGAGATATAC+CGG | - | chr2_3:5305131-5305150 | None:intergenic | 40.0% | |
| CTGTGGAACTTCAAATTGCA+AGG | - | chr2_3:5305220-5305239 | None:intergenic | 40.0% | |
| ! | AATTTGAAGTTCCACAGCTC+AGG | + | chr2_3:5305223-5305242 | Msa0273710:CDS | 40.0% |
| !!! | ATTTTTCAAGTCCTGAGCTG+TGG | - | chr2_3:5305237-5305256 | None:intergenic | 40.0% |
| ATTCAAGGAGTTCCAAACCA+AGG | + | chr2_3:5305255-5305274 | Msa0273710:CDS | 40.0% | |
| CTTCTTATGGTTCCTTGGTT+TGG | - | chr2_3:5305270-5305289 | None:intergenic | 40.0% | |
| AGAAACTATGACCGCAGAAT+TGG | + | chr2_3:5305398-5305417 | Msa0273710:three_prime_UTR | 40.0% | |
| GCAGAATTGGACAAAAGAAG+AGG | + | chr2_3:5305411-5305430 | Msa0273710:three_prime_UTR | 40.0% | |
| ! | CAAGATTCAGAAGGCGATTT+TGG | - | chr2_3:5305741-5305760 | None:intergenic | 40.0% |
| CAAAATCGCCTTCTGAATCT+TGG | + | chr2_3:5305739-5305758 | Msa0273710:three_prime_UTR | 40.0% | |
| ! | ACTTTTCATGCAGGAACTAC+AGG | + | chr2_3:5306024-5306043 | Msa0273710:intron | 40.0% |
| GGTAAACCTTGTACAACATC+AGG | + | chr2_3:5306451-5306470 | Msa0273710:three_prime_UTR | 40.0% | |
| ATGATGGCCGTAGAATGAGT+AGG | - | chr2_3:5302713-5302732 | None:intergenic | 45.0% | |
| TTTCGTCTCACTGACATGAG+TGG | - | chr2_3:5303555-5303574 | None:intergenic | 45.0% | |
| !! | CAATTGAAAGGCACTGCAAC+AGG | - | chr2_3:5303684-5303703 | None:intergenic | 45.0% |
| CTGTTGCAGTGCCTTTCAAT+TGG | + | chr2_3:5303682-5303701 | Msa0273710:CDS | 45.0% | |
| GGGTGCTTAACAGGAATTTG+AGG | - | chr2_3:5303753-5303772 | None:intergenic | 45.0% | |
| !! | GTGAATGAAGGGTGCTTAAC+AGG | - | chr2_3:5303762-5303781 | None:intergenic | 45.0% |
| TTCCTTTACCAATGGCTGTG+TGG | - | chr2_3:5303826-5303845 | None:intergenic | 45.0% | |
| ATCTATTCTAACCGCGTTGC+CGG | - | chr2_3:5303898-5303917 | None:intergenic | 45.0% | |
| TGTAGTGTGAGTGGTGTAAG+TGG | + | chr2_3:5304065-5304084 | Msa0273710:CDS | 45.0% | |
| ! | ATTGTCATAGCTTTTGCGGC+TGG | - | chr2_3:5304173-5304192 | None:intergenic | 45.0% |
| TCTTGACATTCCCCGGTATA+CGG | - | chr2_3:5304308-5304327 | None:intergenic | 45.0% | |
| TTCTTCCTCTTGACATTCCC+CGG | - | chr2_3:5304315-5304334 | None:intergenic | 45.0% | |
| AGTGTCTTGGGTAAAGGATG+TGG | + | chr2_3:5304377-5304396 | Msa0273710:CDS | 45.0% | |
| ! | TCATTTTCATCCCAGCCACA+GGG | - | chr2_3:5304448-5304467 | None:intergenic | 45.0% |
| ! | TTCATTTTCATCCCAGCCAC+AGG | - | chr2_3:5304449-5304468 | None:intergenic | 45.0% |
| CAGAAGAAGGCAAGGTAACT+TGG | - | chr2_3:5304475-5304494 | None:intergenic | 45.0% | |
| ACAACCTCAGAAGCAGAAGA+AGG | - | chr2_3:5304488-5304507 | None:intergenic | 45.0% | |
| AGGCTTGGGAAGCAATTCAT+AGG | + | chr2_3:5304963-5304982 | Msa0273710:intron | 45.0% | |
| GATGGAGCAGTGAATCAAAC+AGG | + | chr2_3:5305038-5305057 | Msa0273710:CDS | 45.0% | |
| TATTCAGGTGAGTTGCTTCC+AGG | + | chr2_3:5305067-5305086 | Msa0273710:CDS | 45.0% | |
| AGACAACAATCTCCCTTTCG+TGG | + | chr2_3:5305151-5305170 | Msa0273710:CDS | 45.0% | |
| AGCAACTTTGTGCCACGAAA+GGG | - | chr2_3:5305166-5305185 | None:intergenic | 45.0% | |
| TTTCGTGGCACAAAGTTGCT+CGG | + | chr2_3:5305166-5305185 | Msa0273710:CDS | 45.0% | |
| TTTGGCAATGGTGGTTGAAG+TGG | - | chr2_3:5305723-5305742 | None:intergenic | 45.0% | |
| !! | TCAGAAGGCGATTTTGGCAA+TGG | - | chr2_3:5305735-5305754 | None:intergenic | 45.0% |
| TGGTCATGTTCGCTATTCTC+AGG | + | chr2_3:5305911-5305930 | Msa0273710:three_prime_UTR | 45.0% | |
| ! | GATTTTCCAGGAGGAAGCCT+AGG | - | chr2_3:5303792-5303811 | None:intergenic | 50.0% |
| CAAATCTGCCACACAGCCAT+TGG | + | chr2_3:5303815-5303834 | Msa0273710:CDS | 50.0% | |
| TGCCACACAGCCATTGGTAA+AGG | + | chr2_3:5303821-5303840 | Msa0273710:CDS | 50.0% | |
| TAAGTCTTTCACCGGCAACG+CGG | + | chr2_3:5303884-5303903 | Msa0273710:CDS | 50.0% | |
| ! | CTTTTGCGGCTGGCAAGAAA+CGG | - | chr2_3:5304163-5304182 | None:intergenic | 50.0% |
| GTATACCGGGGAATGTCAAG+AGG | + | chr2_3:5304307-5304326 | Msa0273710:CDS | 50.0% | |
| ATTGTCGTCGTTAACCCCTG+TGG | + | chr2_3:5304430-5304449 | Msa0273710:CDS | 50.0% | |
| ! | CATTTTCATCCCAGCCACAG+GGG | - | chr2_3:5304447-5304466 | None:intergenic | 50.0% |
| CTCAGAAGCAGAAGAAGGCA+AGG | - | chr2_3:5304483-5304502 | None:intergenic | 50.0% | |
| CTTGCCTTCTTCTGCTTCTG+AGG | + | chr2_3:5304481-5304500 | Msa0273710:CDS | 50.0% | |
| GCATCACCTGAGACACAAGA+AGG | + | chr2_3:5305007-5305026 | Msa0273710:CDS | 50.0% | |
| GAGCAACTTTGTGCCACGAA+AGG | - | chr2_3:5305167-5305186 | None:intergenic | 50.0% | |
| ! | GTTGCACTGACACGAGTTCA+CGG | - | chr2_3:5305632-5305651 | None:intergenic | 50.0% |
| !! | GAAGGCGATTTTGGCAATGG+TGG | - | chr2_3:5305732-5305751 | None:intergenic | 50.0% |
| CGCCTTCTGAATCTTGGCTT+TGG | + | chr2_3:5305745-5305764 | Msa0273710:three_prime_UTR | 50.0% | |
| CGCCAAAGCCAAGATTCAGA+AGG | - | chr2_3:5305750-5305769 | None:intergenic | 50.0% | |
| TTCATGCAGGAACTACAGGC+TGG | + | chr2_3:5306028-5306047 | Msa0273710:intron | 50.0% | |
| !! | GAAAGGCACTGCAACAGGCT+CGG | - | chr2_3:5303679-5303698 | None:intergenic | 55.0% |
| CCAGGAGGAAGCCTAGGAAT+TGG | - | chr2_3:5303786-5303805 | None:intergenic | 55.0% | |
| CCAATTCCTAGGCTTCCTCC+TGG | + | chr2_3:5303783-5303802 | Msa0273710:CDS | 55.0% | |
| CAGGTAGACTCTCTCCCTTC+CGG | + | chr2_3:5305086-5305105 | Msa0273710:CDS | 55.0% | |
| ACAGGGAGATATACCGGCAG+CGG | - | chr2_3:5305125-5305144 | None:intergenic | 55.0% | |
| TCGTCGTTAACCCCTGTGGC+TGG | + | chr2_3:5304434-5304453 | Msa0273710:CDS | 60.0% | |
| CGTCGTTAACCCCTGTGGCT+GGG | + | chr2_3:5304435-5304454 | Msa0273710:CDS | 60.0% | |
| CGGAAGGGAGAGAGTCTACC+TGG | - | chr2_3:5305088-5305107 | None:intergenic | 60.0% | |
| GCTGCTCTTGAACGCCGGAA+GGG | - | chr2_3:5305103-5305122 | None:intergenic | 60.0% | |
| GGCTGCTCTTGAACGCCGGA+AGG | - | chr2_3:5305104-5305123 | None:intergenic | 65.0% | |
| CAGCGGCTGCTCTTGAACGC+CGG | - | chr2_3:5305108-5305127 | None:intergenic | 65.0% | |
| CGTTCAAGAGCAGCCGCTGC+CGG | + | chr2_3:5305109-5305128 | Msa0273710:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 5302497 | 5306490 | 5302497 | ID=Msa0273710;Name=Msa0273710 |
| chr2_3 | mRNA | 5302497 | 5306490 | 5302497 | ID=Msa0273710-mRNA-1;Parent=Msa0273710;Name=Msa0273710-mRNA-1;_AED=0.04;_eAED=0.04;_QI=560|1|1|1|0.66|0.5|4|1101|454 |
| chr2_3 | exon | 5302497 | 5302901 | 5302497 | ID=Msa0273710-mRNA-1:exon:2551;Parent=Msa0273710-mRNA-1 |
| chr2_3 | exon | 5303367 | 5304565 | 5303367 | ID=Msa0273710-mRNA-1:exon:2552;Parent=Msa0273710-mRNA-1 |
| chr2_3 | exon | 5304965 | 5305932 | 5304965 | ID=Msa0273710-mRNA-1:exon:2553;Parent=Msa0273710-mRNA-1 |
| chr2_3 | exon | 5306037 | 5306490 | 5306037 | ID=Msa0273710-mRNA-1:exon:2554;Parent=Msa0273710-mRNA-1 |
| chr2_3 | five_prime_UTR | 5302497 | 5302901 | 5302497 | ID=Msa0273710-mRNA-1:five_prime_utr;Parent=Msa0273710-mRNA-1 |
| chr2_3 | five_prime_UTR | 5303367 | 5303521 | 5303367 | ID=Msa0273710-mRNA-1:five_prime_utr;Parent=Msa0273710-mRNA-1 |
| chr2_3 | CDS | 5303522 | 5304565 | 5303522 | ID=Msa0273710-mRNA-1:cds;Parent=Msa0273710-mRNA-1 |
| chr2_3 | CDS | 5304965 | 5305285 | 5304965 | ID=Msa0273710-mRNA-1:cds;Parent=Msa0273710-mRNA-1 |
| chr2_3 | three_prime_UTR | 5305286 | 5305932 | 5305286 | ID=Msa0273710-mRNA-1:three_prime_utr;Parent=Msa0273710-mRNA-1 |
| chr2_3 | three_prime_UTR | 5306037 | 5306490 | 5306037 | ID=Msa0273710-mRNA-1:three_prime_utr;Parent=Msa0273710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
