AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0369750


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0369750 MtrunA17_Chr3g0114501 98.812 589 7 0 1 589 1 589 0.0 1202
Msa0369750 MtrunA17_Chr7g0261771 51.478 575 270 4 2 571 11 581 0.0 614
Msa0369750 MtrunA17_Chr7g0261881 50.685 584 277 5 2 580 7 584 0.0 613
Msa0369750 MtrunA17_Chr1g0187241 51.295 579 271 5 4 576 8 581 0.0 599
Msa0369750 MtrunA17_Chr1g0166711 51.552 580 273 4 6 581 9 584 0.0 598
Msa0369750 MtrunA17_Chr7g0261811 50.087 575 278 4 2 571 7 577 0.0 595
Msa0369750 MtrunA17_Chr7g0261791 50.709 564 268 4 4 561 11 570 0.0 582
Msa0369750 MtrunA17_Chr1g0166791 48.973 584 291 4 1 580 3 583 0.0 581
Msa0369750 MtrunA17_Chr7g0261851 49.576 589 284 6 5 585 11 594 0.0 581
Msa0369750 MtrunA17_Chr7g0241741 46.454 564 295 5 3 562 2 562 0.0 536
Msa0369750 MtrunA17_Chr1g0166741 47.865 562 279 5 6 563 11 562 0.0 535
Msa0369750 MtrunA17_Chr1g0166771 49.023 512 247 5 37 544 6 507 1.75e-177 513
Msa0369750 MtrunA17_Chr8g0375311 43.486 568 314 4 2 564 20 585 1.93e-174 507
Msa0369750 MtrunA17_Chr4g0005901 44.326 564 306 5 4 562 12 572 1.76e-171 499
Msa0369750 MtrunA17_Chr8g0375291 44.065 556 304 4 2 552 20 573 1.98e-169 494
Msa0369750 MtrunA17_Chr3g0104011 43.463 566 314 4 1 562 1 564 1.99e-166 486
Msa0369750 MtrunA17_Chr7g0261751 47.525 505 220 5 2 465 11 511 1.03e-163 477
Msa0369750 MtrunA17_Chr8g0375341 41.725 568 324 4 2 564 20 585 1.30e-160 471
Msa0369750 MtrunA17_Chr8g0375351 41.373 568 326 4 2 564 20 585 1.92e-160 471
Msa0369750 MtrunA17_Chr8g0375321 40.636 566 329 4 4 564 19 582 5.88e-160 469
Msa0369750 MtrunA17_Chr8g0375331 41.343 566 325 4 4 564 6 569 2.56e-156 460
Msa0369750 MtrunA17_Chr7g0261661 49.036 467 229 4 110 571 1 463 1.81e-154 452
Msa0369750 MtrunA17_Chr4g0014871 41.416 565 311 8 1 563 9 555 1.86e-154 455
Msa0369750 MtrunA17_Chr3g0112671 40.172 580 319 8 4 580 15 569 3.71e-152 449
Msa0369750 MtrunA17_Chr1g0166731 50.109 459 221 4 109 563 9 463 9.53e-152 445
Msa0369750 MtrunA17_Chr8g0375361 41.239 565 323 5 5 562 20 582 3.12e-150 445
Msa0369750 MtrunA17_Chr7g0240381 38.786 593 342 7 1 585 4 583 4.62e-150 444
Msa0369750 MtrunA17_Chr3g0077151 41.563 563 295 6 8 565 14 547 8.84e-150 442
Msa0369750 MtrunA17_Chr3g0112611 39.353 587 342 9 4 584 14 592 7.52e-149 441
Msa0369750 MtrunA17_Chr4g0008651 38.529 571 339 6 2 567 12 575 2.13e-146 435
Msa0369750 MtrunA17_Chr4g0014841 41.593 565 306 8 1 563 9 551 1.22e-145 432
Msa0369750 MtrunA17_Chr4g0014781 40.860 558 309 8 10 565 17 555 4.60e-145 431
Msa0369750 MtrunA17_Chr3g0142101 40.893 560 317 7 10 566 23 571 6.53e-144 429
Msa0369750 MtrunA17_Chr4g0014791 40.966 559 303 9 10 564 17 552 1.25e-143 427
Msa0369750 MtrunA17_Chr4g0014801 39.964 558 314 8 10 565 17 555 4.81e-141 420
Msa0369750 MtrunA17_Chr8g0353031 41.379 551 294 8 23 562 19 551 1.69e-133 401
Msa0369750 MtrunA17_Chr3g0142091 40.036 562 319 9 13 568 17 566 4.09e-131 395
Msa0369750 MtrunA17_Chr5g0422881 38.165 545 330 5 24 562 22 565 1.91e-128 389
Msa0369750 MtrunA17_Chr5g0399061 38.393 560 331 9 14 563 19 574 2.61e-128 389
Msa0369750 MtrunA17_Chr7g0261731 52.047 342 155 4 3 339 12 349 1.40e-125 374
Msa0369750 MtrunA17_Chr4g0056431 39.024 574 330 10 14 570 17 587 3.79e-124 378
Msa0369750 MtrunA17_Chr7g0255621 36.166 553 341 7 18 561 16 565 1.92e-120 369
Msa0369750 MtrunA17_Chr2g0284701 35.274 584 361 7 1 567 11 594 1.97e-119 366
Msa0369750 MtrunA17_Chr7g0214731 35.940 601 360 12 1 580 38 634 3.49e-119 367
Msa0369750 MtrunA17_Chr5g0415791 37.457 582 339 11 16 582 27 598 1.45e-118 364
Msa0369750 MtrunA17_Chr7g0255601 35.043 585 365 8 10 582 15 596 5.16e-118 363
Msa0369750 MtrunA17_Chr5g0399071 37.390 567 339 9 14 570 17 577 6.63e-118 362
Msa0369750 MtrunA17_Chr7g0217461 37.326 576 333 11 5 562 7 572 2.42e-117 360
Msa0369750 MtrunA17_Chr4g0054891 35.472 561 344 8 2 552 90 642 6.48e-117 362
Msa0369750 MtrunA17_Chr7g0255611 35.274 584 362 9 13 585 22 600 2.79e-116 358
Msa0369750 MtrunA17_Chr5g0400371 34.715 579 357 10 5 569 95 666 7.30e-116 359
Msa0369750 MtrunA17_Chr1g0213711 35.169 563 351 9 1 558 1 554 8.71e-114 351
Msa0369750 MtrunA17_Chr7g0218851 35.572 551 338 9 16 558 40 581 8.73e-114 352
Msa0369750 MtrunA17_Chr7g0214461 34.062 549 347 9 16 558 72 611 3.18e-113 351
Msa0369750 MtrunA17_Chr4g0014861 40.793 429 242 7 137 563 12 430 3.12e-111 339
Msa0369750 MtrunA17_Chr5g0439381 35.274 584 345 9 4 576 10 571 8.63e-111 343
Msa0369750 MtrunA17_Chr1g0193391 35.816 564 336 10 10 564 3 549 5.04e-110 342
Msa0369750 MtrunA17_Chr8g0379971 34.609 601 353 8 4 568 2 598 6.49e-109 339
Msa0369750 MtrunA17_Chr7g0271221 36.949 544 325 10 24 563 19 548 2.32e-108 337
Msa0369750 MtrunA17_Chr4g0059991 34.615 572 354 10 21 576 21 588 5.32e-108 337
Msa0369750 MtrunA17_Chr3g0133341 36.823 554 327 9 18 561 10 550 5.99e-106 330
Msa0369750 MtrunA17_Chr8g0390331 35.149 569 338 11 1 558 5 553 9.90e-104 325
Msa0369750 MtrunA17_Chr4g0059971 34.489 548 344 9 28 562 40 585 2.54e-103 324
Msa0369750 MtrunA17_Chr2g0276751 34.142 577 348 12 2 569 18 571 3.02e-102 321
Msa0369750 MtrunA17_Chr4g0063591 36.210 591 351 9 1 582 1 574 5.25e-102 320
Msa0369750 MtrunA17_Chr4g0011041 32.056 574 362 10 2 558 16 578 4.20e-101 318
Msa0369750 MtrunA17_Chr5g0415961 32.180 578 367 9 1 561 3 572 4.90e-101 318
Msa0369750 MtrunA17_Chr6g0451841 33.630 562 311 9 30 564 13 539 3.05e-100 315
Msa0369750 MtrunA17_Chr3g0082631 37.045 494 264 10 104 579 9 473 2.40e-99 310
Msa0369750 MtrunA17_Chr1g0147631 33.275 568 352 8 4 558 11 564 5.83e-99 313
Msa0369750 MtrunA17_Chr1g0157601 32.781 543 347 10 26 558 19 553 1.80e-98 311
Msa0369750 MtrunA17_Chr8g0362711 31.088 579 371 8 1 561 3 571 1.14e-97 309
Msa0369750 MtrunA17_Chr2g0331521 31.625 566 362 9 6 558 10 563 3.00e-96 306
Msa0369750 MtrunA17_Chr8g0379991 33.100 571 337 9 43 568 1 571 5.32e-94 299
Msa0369750 MtrunA17_Chr4g0059981 33.157 567 357 11 28 577 37 598 1.93e-93 299
Msa0369750 MtrunA17_Chr4g0011471 33.647 532 325 9 43 558 37 556 7.96e-93 296
Msa0369750 MtrunA17_Chr4g0069581 33.394 545 343 9 41 579 5 535 6.89e-92 293
Msa0369750 MtrunA17_Chr2g0331471 32.270 564 344 15 33 570 99 650 1.23e-87 286
Msa0369750 MtrunA17_Chr7g0240271 30.877 570 377 9 2 559 4 568 1.94e-87 283
Msa0369750 MtrunA17_Chr1g0157611 31.618 544 352 9 26 558 20 554 2.95e-87 281
Msa0369750 MtrunA17_Chr8g0362781 29.101 567 382 7 16 566 24 586 7.63e-87 281
Msa0369750 MtrunA17_Chr2g0331481 32.270 564 344 15 33 570 36 587 1.29e-86 282
Msa0369750 MtrunA17_Chr2g0331511 33.024 539 340 12 33 558 32 562 2.34e-86 281
Msa0369750 MtrunA17_Chr4g0060001 30.324 587 381 11 12 579 14 591 5.41e-85 276
Msa0369750 MtrunA17_Chr4g0003761 30.890 573 362 14 1 558 16 569 1.26e-84 275
Msa0369750 MtrunA17_Chr1g0157621 31.679 524 343 8 43 558 1 517 1.49e-83 271
Msa0369750 MtrunA17_Chr8g0362801 33.030 439 281 6 131 561 28 461 3.37e-79 258
Msa0369750 MtrunA17_Chr7g0240281 30.756 569 375 9 24 578 26 589 1.38e-76 254
Msa0369750 MtrunA17_Chr2g0331461 31.449 566 358 15 33 580 36 589 5.40e-76 253
Msa0369750 MtrunA17_Chr2g0325951 28.647 569 368 12 10 562 2 548 1.13e-72 243
Msa0369750 MtrunA17_Chr2g0326211 29.371 572 360 12 10 562 2 548 4.87e-71 238
Msa0369750 MtrunA17_Chr1g0177591 28.471 569 368 17 1 558 24 564 2.42e-70 237
Msa0369750 MtrunA17_Chr3g0142111 39.456 294 175 3 10 301 34 326 1.53e-68 225
Msa0369750 MtrunA17_Chr2g0325961 30.245 572 356 13 10 562 2 549 7.88e-68 229
Msa0369750 MtrunA17_Chr3g0112631 42.125 273 150 5 294 561 3 272 6.30e-67 219
Msa0369750 MtrunA17_Chr7g0261721 48.341 211 109 0 361 571 1 211 1.66e-64 211
Msa0369750 MtrunA17_Chr3g0142121 41.912 272 149 3 295 566 11 273 3.31e-62 207
Msa0369750 MtrunA17_Chr7g0235521 29.437 462 309 9 110 559 1 457 2.45e-60 208
Msa0369750 MtrunA17_Chr7g0240181 29.221 462 310 9 110 559 1 457 3.31e-59 205
Msa0369750 MtrunA17_Chr7g0240211 29.221 462 310 9 110 559 1 457 3.56e-59 204
Msa0369750 MtrunA17_Chr7g0240131 29.221 462 310 9 110 559 1 457 4.37e-59 204
Msa0369750 MtrunA17_Chr1g0177611 28.671 429 282 10 138 558 23 435 7.94e-58 200
Msa0369750 MtrunA17_Chr5g0415841 27.626 438 308 5 129 561 26 459 1.39e-55 194
Msa0369750 MtrunA17_Chr1g0177631 28.372 430 282 10 138 558 23 435 8.92e-55 192
Msa0369750 MtrunA17_Chr7g0240151 28.850 461 295 10 110 559 1 439 2.41e-54 191
Msa0369750 MtrunA17_Chr7g0234381 29.933 451 280 10 109 558 3 418 6.36e-53 186
Msa0369750 MtrunA17_Chr7g0234181 29.454 421 267 8 138 558 23 413 6.64e-52 183
Msa0369750 MtrunA17_Chr7g0234151 29.204 452 282 10 109 558 3 418 4.58e-50 178
Msa0369750 MtrunA17_Chr4g0060071 32.237 304 194 6 264 561 1 298 8.98e-50 174
Msa0369750 MtrunA17_Chr7g0261671 62.264 106 40 0 3 108 13 118 1.44e-43 151
Msa0369750 MtrunA17_Chr1g0166721 62.500 104 39 0 5 108 8 111 3.04e-43 151
Msa0369750 MtrunA17_Chr7g0261831 43.750 160 80 3 249 404 1 154 3.80e-36 134
Msa0369750 MtrunA17_Chr3g0112651 39.394 165 98 2 109 273 21 183 3.65e-35 132
Msa0369750 MtrunA17_Chr4g0014851 47.222 108 57 0 1 108 9 116 1.97e-29 114
Msa0369750 MtrunA17_Chr1g0147591 37.073 205 105 8 142 333 3 196 6.27e-29 114
Msa0369750 MtrunA17_Chr3g0112661 43.137 102 58 0 7 108 16 117 1.25e-24 99.8
Msa0369750 MtrunA17_Chr4g0060061 34.586 133 83 1 127 259 4 132 4.77e-22 92.4
Msa0369750 MtrunA17_Chr2g0326221 26.860 242 140 6 324 561 15 223 2.62e-20 90.1
Msa0369750 MtrunA17_Chr3g0082621 53.521 71 33 0 38 108 2 72 1.87e-17 77.8
Msa0369750 MtrunA17_Chr7g0240221 37.895 95 59 0 2 96 7 101 1.04e-16 76.6
Msa0369750 MtrunA17_Chr7g0240191 37.895 95 59 0 2 96 7 101 1.04e-16 76.6
Msa0369750 MtrunA17_Chr7g0240161 37.895 95 59 0 2 96 7 101 1.04e-16 76.6
Msa0369750 MtrunA17_Chr7g0240141 37.895 95 59 0 2 96 7 101 1.11e-16 76.6
Msa0369750 MtrunA17_Chr8g0362791 40.000 85 51 0 28 112 42 126 2.54e-16 76.3
Msa0369750 MtrunA17_Chr7g0235511 37.113 97 59 1 2 96 7 103 5.05e-15 72.0
Msa0369750 MtrunA17_Chr1g0147581 36.441 118 68 3 419 535 5 116 6.18e-14 68.6
Msa0369750 MtrunA17_Chr7g0261821 43.284 67 38 0 499 565 1 67 1.34e-13 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0369750 AT2G40460.1 72.014 586 155 3 1 584 1 579 0.0 860
Msa0369750 AT5G46050.1 48.881 581 285 6 2 576 5 579 0.0 546
Msa0369750 AT5G01180.2 45.343 569 303 6 1 564 1 566 0.0 533
Msa0369750 AT5G01180.3 45.343 569 303 6 1 564 1 566 0.0 533
Msa0369750 AT5G01180.1 45.343 569 303 6 1 564 1 566 0.0 533
Msa0369750 AT5G46040.1 49.315 584 280 10 2 578 5 579 0.0 532
Msa0369750 AT3G54140.1 44.737 570 309 4 1 566 1 568 1.11e-179 520
Msa0369750 AT3G54140.2 44.737 570 309 4 1 566 1 568 1.11e-179 520
Msa0369750 AT2G02040.1 43.085 564 314 5 7 565 24 585 5.87e-172 501
Msa0369750 AT1G62200.1 43.772 562 298 6 9 562 37 588 1.45e-167 489
Msa0369750 AT1G62200.3 41.723 592 298 7 8 562 50 631 7.29e-162 476
Msa0369750 AT1G62200.2 41.723 592 298 7 8 562 36 617 9.57e-162 476
Msa0369750 AT2G02020.1 40.497 563 295 7 2 562 20 544 3.79e-150 444
Msa0369750 AT3G53960.1 37.563 591 352 9 2 586 15 594 3.23e-146 436
Msa0369750 AT2G37900.1 39.184 564 326 7 2 561 16 566 3.45e-144 429
Msa0369750 AT2G02020.2 39.432 563 280 8 2 562 20 523 1.51e-141 421
Msa0369750 AT3G54450.1 40.659 546 299 9 26 562 14 543 3.72e-140 418
Msa0369750 AT5G46050.2 47.146 473 238 6 110 576 1 467 1.35e-139 414
Msa0369750 AT1G22540.1 39.388 556 318 6 12 565 18 556 9.78e-138 412
Msa0369750 AT1G72120.1 41.208 563 308 8 4 562 10 553 9.32e-136 407
Msa0369750 AT1G72140.1 38.503 561 306 8 12 562 22 553 1.20e-135 407
Msa0369750 AT1G72125.1 41.208 563 312 9 4 562 10 557 1.54e-135 407
Msa0369750 AT1G22570.1 40.000 565 317 7 5 562 12 561 1.15e-134 404
Msa0369750 AT1G68570.1 38.963 598 343 8 2 582 3 595 3.85e-133 402
Msa0369750 AT1G22550.1 39.046 566 320 9 5 562 12 560 6.88e-131 395
Msa0369750 AT1G68570.2 40.214 562 316 7 38 582 7 565 8.41e-131 395
Msa0369750 AT1G72130.1 38.787 544 298 7 25 565 26 537 2.32e-126 382
Msa0369750 AT2G37900.2 39.880 499 283 7 67 561 2 487 6.60e-126 380
Msa0369750 AT1G22570.2 39.813 535 301 6 35 562 4 524 8.99e-125 378
Msa0369750 AT2G26690.1 38.256 562 324 9 1 552 1 549 8.51e-115 353
Msa0369750 AT3G21670.1 37.123 563 320 9 14 563 19 560 1.41e-114 353
Msa0369750 AT1G32450.1 35.377 571 345 11 5 558 18 581 3.31e-113 351
Msa0369750 AT1G12110.1 35.862 580 351 10 2 569 5 575 5.48e-113 349
Msa0369750 AT1G69870.1 35.870 552 338 5 21 561 48 594 4.16e-112 348
Msa0369750 AT5G13400.1 36.126 573 348 10 13 570 52 621 2.05e-111 347
Msa0369750 AT4G21680.1 34.843 574 356 9 5 565 9 577 8.43e-111 344
Msa0369750 AT1G18880.1 34.650 557 344 9 28 569 23 574 8.87e-108 336
Msa0369750 AT1G59740.1 34.225 561 354 7 2 555 19 571 3.83e-106 332
Msa0369750 AT1G69850.1 31.491 597 365 10 1 566 1 584 7.34e-104 326
Msa0369750 AT2G26690.2 37.951 527 304 9 36 552 3 516 1.27e-103 324
Msa0369750 AT5G14940.1 34.043 564 339 11 24 572 7 552 1.31e-103 324
Msa0369750 AT1G33440.1 34.828 580 345 11 1 566 15 575 3.26e-102 322
Msa0369750 AT1G52190.1 33.333 579 343 13 2 558 9 566 3.51e-102 322
Msa0369750 AT2G26690.3 37.984 516 297 9 47 552 2 504 1.06e-100 316
Msa0369750 AT5G19640.1 33.457 541 334 11 25 558 60 581 2.53e-100 317
Msa0369750 AT1G72130.2 38.747 431 236 6 138 565 14 419 3.53e-99 308
Msa0369750 AT1G72130.3 38.747 431 236 6 138 565 14 419 3.53e-99 308
Msa0369750 AT1G27040.1 32.258 558 361 7 10 560 13 560 1.46e-97 309
Msa0369750 AT1G27040.2 32.258 558 361 7 10 560 9 556 1.85e-97 308
Msa0369750 AT3G47960.1 35.219 548 337 10 28 561 65 608 3.97e-95 304
Msa0369750 AT3G01350.1 32.281 570 341 12 26 569 9 559 2.13e-94 300
Msa0369750 AT5G62680.1 33.276 580 357 10 4 567 33 598 7.92e-94 300
Msa0369750 AT1G27040.3 32.402 537 346 7 31 560 2 528 1.97e-93 297
Msa0369750 AT3G16180.1 34.438 543 330 13 33 558 32 565 4.21e-93 298
Msa0369750 AT3G25260.1 32.418 546 327 10 14 558 11 515 9.58e-87 279
Msa0369750 AT5G28470.2 32.136 557 342 14 21 558 14 553 4.03e-86 279
Msa0369750 AT3G45650.1 29.663 563 364 9 8 562 6 544 3.02e-85 276
Msa0369750 AT5G62730.1 29.711 589 352 9 2 563 34 587 5.37e-85 276
Msa0369750 AT1G27080.1 32.118 576 361 11 24 584 14 574 8.41e-85 276
Msa0369750 AT5G28470.1 31.777 557 342 15 21 558 14 551 7.29e-84 273
Msa0369750 AT1G69860.1 32.784 546 347 10 28 566 22 554 1.62e-83 271
Msa0369750 AT3G45660.1 31.439 528 330 8 43 562 40 543 4.49e-83 270
Msa0369750 AT3G45660.3 31.439 528 330 8 43 562 40 543 4.49e-83 270
Msa0369750 AT3G45660.2 31.439 528 330 8 43 562 61 564 8.12e-83 270
Msa0369750 AT5G62730.2 29.768 561 332 9 30 563 3 528 1.09e-80 263
Msa0369750 AT3G25280.1 30.341 557 348 9 5 558 2 521 1.37e-80 263
Msa0369750 AT3G45650.2 28.353 589 364 10 8 562 6 570 1.80e-79 262
Msa0369750 AT3G45680.1 29.772 571 362 13 10 569 8 550 9.53e-77 254
Msa0369750 AT1G27080.2 31.927 545 341 11 55 584 3 532 5.65e-76 251
Msa0369750 AT3G45720.1 30.492 528 329 13 46 562 41 541 6.88e-71 238
Msa0369750 AT3G45700.1 27.848 553 352 11 23 562 15 533 5.80e-70 236
Msa0369750 AT3G45710.1 28.421 570 365 14 8 562 4 545 9.76e-70 235
Msa0369750 AT3G45690.1 29.926 538 310 16 23 553 17 494 7.32e-66 224
Msa0369750 AT2G38100.2 26.577 523 328 17 52 558 2 484 1.31e-39 152
Msa0369750 AT2G38100.1 26.577 523 328 17 52 558 18 500 3.16e-39 151
Msa0369750 AT2G38100.3 26.577 523 328 17 52 558 24 506 4.28e-39 150
Msa0369750 AT5G11570.1 33.077 260 158 7 303 558 229 476 9.43e-33 132
Msa0369750 AT5G11570.1 28.333 240 150 6 16 247 15 240 1.21e-26 114

Find 146 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCACTTAGATTACTATTA+TGG 0.130549 3_1:+67069099 Msa0369750:CDS
TTTCAATGCCATTGGATTAT+TGG 0.142348 3_1:+67068909 Msa0369750:CDS
AAATGGAACATTGTGTTATT+AGG 0.143035 3_1:+67066010 Msa0369750:CDS
TGTATATTTAATATCTTTAA+TGG 0.162276 3_1:+67064403 Msa0369750:exon
TCCTCATGAGAAAGAGTTAA+AGG 0.194574 3_1:+67065702 Msa0369750:CDS
TAAAGGCTTCTTTCTTTAAT+TGG 0.203778 3_1:+67065719 Msa0369750:CDS
TGCTGGTTTATTATTGTCTT+TGG 0.212439 3_1:+67065840 Msa0369750:CDS
AGCCTTCCATTTCCCAGTTT+TGG 0.219265 3_1:-67064489 None:intergenic
GCACCAAAAGTTGAGATATT+TGG 0.221917 3_1:-67065658 None:intergenic
TTACCACAATATGTTCTTAT+TGG 0.230143 3_1:+67068874 Msa0369750:CDS
ATTCTTACCTGGGTCGCTTC+TGG 0.236583 3_1:+67064818 Msa0369750:CDS
GTGCCTTAATTGCAACTTTA+GGG 0.240529 3_1:+67065764 Msa0369750:CDS
AATGGAACATTGTGTTATTA+GGG 0.240985 3_1:+67066011 Msa0369750:CDS
TTGTCCCTATGAGTATATTT+TGG 0.246334 3_1:+67068848 Msa0369750:CDS
GTATATATTCAAGAGAATTT+AGG 0.251074 3_1:+67065790 Msa0369750:CDS
GGTGCCTTAATTGCAACTTT+AGG 0.256324 3_1:+67065763 Msa0369750:CDS
AAGCCCTAAAGTTGCAATTA+AGG 0.273762 3_1:-67065767 None:intergenic
CCAAGACTTTGCATGTCTTC+AGG 0.277774 3_1:-67068952 None:intergenic
CTAACTTTGTGTCGATAAAT+TGG 0.279561 3_1:-67065883 None:intergenic
CCTGCTGTTCCATCCAAAAC+TGG 0.284363 3_1:+67064476 Msa0369750:CDS
TCTACTTGATTTACTGTCAT+TGG 0.286034 3_1:-67068448 None:intergenic
ATCATGGGTATAGTCTTCTT+TGG 0.286104 3_1:-67064429 None:intergenic
CTCACTTAGATTACTATTAT+GGG 0.299840 3_1:+67069100 Msa0369750:CDS
AAACCAAATATCTCAACTTT+TGG 0.301836 3_1:+67065655 Msa0369750:CDS
TCTAGAGAAAATTTCAAGTA+TGG 0.309470 3_1:+67069342 Msa0369750:three_prime_UTR
TTAGGATGGGGACTTGGATA+TGG 0.322007 3_1:+67065808 Msa0369750:CDS
CACTGATTCCAAGCACCATT+TGG 0.336231 3_1:+67068515 Msa0369750:CDS
TTTGAAAGGATGGCCTTCTA+TGG 0.336648 3_1:+67064667 Msa0369750:CDS
TCAGTGTTACTAACCATATT+AGG 0.340683 3_1:-67068498 None:intergenic
AACAAGTTAATTAAGTAGAT+AGG 0.342754 3_1:+67069427 Msa0369750:three_prime_UTR
ATTGTGTTATTAGGGGAAAA+AGG 0.344611 3_1:+67066019 Msa0369750:CDS
TCCTTGGTATGCTCCTAATA+TGG 0.344882 3_1:+67068485 Msa0369750:CDS
GTTTGGATAACACCAATTCT+TGG 0.350998 3_1:+67064781 Msa0369750:CDS
CTCATCTCTCATTTATGTCT+TGG 0.355515 3_1:+67064852 Msa0369750:CDS
AGGACCAAGGTTTCTGTCTA+AGG 0.369834 3_1:-67068575 None:intergenic
ACTTTCTTCACAAGTGGAAT+TGG 0.371149 3_1:+67068979 Msa0369750:CDS
GAGGATTAAAATCATCAAAT+TGG 0.372384 3_1:-67065684 None:intergenic
CTTGTCAAGTGTTAATTTGT+TGG 0.372916 3_1:+67069134 Msa0369750:CDS
AGGAATGTTAATACATGGTC+AGG 0.381248 3_1:+67064754 Msa0369750:CDS
CTTCTTGAGGAACCAGTTGT+AGG 0.391292 3_1:-67068421 None:intergenic
AACAACCAAAATATACTCAT+AGG 0.391678 3_1:-67068853 None:intergenic
TTACTTCAAAGACTTGGAAT+AGG 0.391905 3_1:+67068727 Msa0369750:CDS
CAATTTATCGACACAAAGTT+AGG 0.392936 3_1:+67065884 Msa0369750:CDS
CTGCGCCGTGCAACGATTGT+AGG 0.392972 3_1:-67069296 None:intergenic
AAGATACTGTTTCATCAGTT+AGG 0.396676 3_1:+67064734 Msa0369750:CDS
AATGGAAGGTAATTCAACTT+TGG 0.407537 3_1:+67069230 Msa0369750:CDS
ATACATGGTCAGGGTCTGTT+TGG 0.412198 3_1:+67064764 Msa0369750:CDS
AGAAGCACTTTGTGTTCAAA+TGG 0.412642 3_1:+67069212 Msa0369750:CDS
TTCCATCCAAAACTGGGAAA+TGG 0.419022 3_1:+67064483 Msa0369750:CDS
GTTTGATGCAACTCCATAGA+AGG 0.419937 3_1:-67064680 None:intergenic
CTTCATGAAGTTGTGTTGTA+AGG 0.420306 3_1:-67064714 None:intergenic
ACAATGACTGATAAGATAAC+AGG 0.426895 3_1:+67069033 Msa0369750:CDS
CTATGGAGTTGCATCAAACT+TGG 0.433756 3_1:+67064684 Msa0369750:CDS
CTCATAGGGACAATATCTTT+AGG 0.436414 3_1:-67068838 None:intergenic
TCACAAGTGGAATTGGTGTT+GGG 0.437948 3_1:+67068986 Msa0369750:CDS
TTCACAAGTGGAATTGGTGT+TGG 0.438075 3_1:+67068985 Msa0369750:CDS
ATGACAGTAAATCAAGTAGA+AGG 0.439592 3_1:+67068451 Msa0369750:CDS
CCGTTCATGCGCCAGAAAAC+CGG 0.443452 3_1:+67068685 Msa0369750:CDS
GCACTTTACACAATGGCAAT+TGG 0.443556 3_1:+67065619 Msa0369750:CDS
ACTGATTCCAAGCACCATTT+GGG 0.443685 3_1:+67068516 Msa0369750:CDS
TCAACTTTGGATGCATCTCT+TGG 0.444482 3_1:+67069243 Msa0369750:CDS
CAAATTCCATTTGTGCATGT+TGG 0.447193 3_1:-67065556 None:intergenic
TGTAGATCTGAAGGGTTACT+AGG 0.449676 3_1:-67065979 None:intergenic
ACACTTGCTTACCTCAAAGT+TGG 0.452079 3_1:-67066057 None:intergenic
TGCGCCGTGCAACGATTGTA+GGG 0.452822 3_1:-67069295 None:intergenic
TCTATCACACTCCAACTTTG+AGG 0.456422 3_1:+67066046 Msa0369750:CDS
AGGCTTCTTTCTTTAATTGG+TGG 0.457739 3_1:+67065722 Msa0369750:CDS
TGTGATTCCTCTCGGGTGGC+CGG 0.458648 3_1:-67068704 None:intergenic
GAGAATTTAGGATGGGGACT+TGG 0.459132 3_1:+67065802 Msa0369750:CDS
TGAAGTAATGTGATTCCTCT+CGG 0.459981 3_1:-67068712 None:intergenic
GGATATGGTATTCCTACTGC+TGG 0.460012 3_1:+67065823 Msa0369750:CDS
CGTTGCACGGCGCAGTGCCA+TGG 0.461082 3_1:+67069304 Msa0369750:three_prime_UTR
GCAATGTAAGCACCAAGAAT+TGG 0.467213 3_1:-67064793 None:intergenic
GTTGCACGGCGCAGTGCCAT+GGG 0.469791 3_1:+67069305 Msa0369750:three_prime_UTR
ATTAAAGAAGATCCTACAAC+TGG 0.473810 3_1:+67068409 Msa0369750:CDS
CACTGAGAGCAGCATGGATA+GGG 0.474994 3_1:-67068638 None:intergenic
CAATTGCAATGGCTATGATC+TGG 0.475158 3_1:-67068759 None:intergenic
TTACATTGCAGATTCTTACC+TGG 0.476724 3_1:+67064807 Msa0369750:CDS
AGATCTACATGAGTTTCAAA+TGG 0.478491 3_1:+67065993 Msa0369750:CDS
TAAATTATGTGTGTAATCAA+TGG 0.480285 3_1:+67069497 Msa0369750:three_prime_UTR
CCTGAAGACATGCAAAGTCT+TGG 0.489343 3_1:+67068952 Msa0369750:CDS
TACACAATGGCAATTGGTGC+AGG 0.489428 3_1:+67065625 Msa0369750:CDS
TTGAAACCAACATGCACAAA+TGG 0.494777 3_1:+67065550 Msa0369750:CDS
TACATTGCAGATTCTTACCT+GGG 0.494969 3_1:+67064808 Msa0369750:CDS
GGAAATCAACAGTTCCATCA+TGG 0.497099 3_1:-67064445 None:intergenic
TGTCATTGGTGCTCTTCTTG+AGG 0.497730 3_1:-67068434 None:intergenic
TAATTTACAAACTATTACAC+AGG 0.502220 3_1:-67069481 None:intergenic
ATTTGTGCCCAAATGGTGCT+TGG 0.502978 3_1:-67068523 None:intergenic
ACAAGTTAATTAAGTAGATA+GGG 0.507033 3_1:+67069428 Msa0369750:three_prime_UTR
GTATAGTACATTGTTGAATG+AGG 0.507678 3_1:-67069647 None:intergenic
GAAGGAGCAAAGCTAATCCT+TGG 0.508830 3_1:+67068469 Msa0369750:CDS
TGAAACTCATGTAGATCTGA+AGG 0.512547 3_1:-67065988 None:intergenic
ATCACATTACTTCAAAGACT+TGG 0.515956 3_1:+67068721 Msa0369750:CDS
GAAGTAATGTGATTCCTCTC+GGG 0.522163 3_1:-67068711 None:intergenic
AAAATCCCAGCAGCATCTCT+AGG 0.522560 3_1:+67068604 Msa0369750:CDS
AGTGTTGATTTGTGCCCAAA+TGG 0.524157 3_1:-67068530 None:intergenic
AAGTAGATACATTTACAAGA+AGG 0.524961 3_1:+67069173 Msa0369750:CDS
GCCTTTAACTCTTTCTCATG+AGG 0.529898 3_1:-67065703 None:intergenic
GGAACAACTTTCTTCACAAG+TGG 0.532928 3_1:+67068973 Msa0369750:CDS
GCACTGAGAGCAGCATGGAT+AGG 0.533967 3_1:-67068639 None:intergenic
GCACTTTGTGTTCAAATGGA+AGG 0.535871 3_1:+67069216 Msa0369750:CDS
AAAGAAGACTATACCCATGA+TGG 0.538056 3_1:+67064431 Msa0369750:CDS
GAAGAGGGACTAGAAAGAGT+TGG 0.543314 3_1:+67069055 Msa0369750:CDS
GACATCTAAAAGTCCTGCTA+AGG 0.544118 3_1:+67065906 Msa0369750:CDS
ACACGAATTATATCCTTAGC+AGG 0.545832 3_1:-67065919 None:intergenic
ACTGATAAGATAACAGGAAG+AGG 0.551715 3_1:+67069039 Msa0369750:CDS
GAAATCAACAGTTCCATCAT+GGG 0.552746 3_1:-67064444 None:intergenic
AGCTGCCTAGAGATGCTGCT+GGG 0.554054 3_1:-67068609 None:intergenic
TATTCAAGAGAATTTAGGAT+GGG 0.557111 3_1:+67065795 Msa0369750:CDS
CTGCTGTTCCATCCAAAACT+GGG 0.558606 3_1:+67064477 Msa0369750:CDS
ACAACCAAAATATACTCATA+GGG 0.560334 3_1:-67068852 None:intergenic
CAGTTAGGAATGTTAATACA+TGG 0.561918 3_1:+67064749 Msa0369750:CDS
GTATGAAGCATTTGAAAGGA+TGG 0.563974 3_1:+67064657 Msa0369750:CDS
CAGGGTATGAAGCATTTGAA+AGG 0.571557 3_1:+67064653 Msa0369750:intron
AAGCTGCCTAGAGATGCTGC+TGG 0.575379 3_1:-67068610 None:intergenic
TCTTGGCTTACAAGTATGAG+AGG 0.577434 3_1:+67069260 Msa0369750:exon
TCTCAGTGCCAATGTATGAC+CGG 0.581455 3_1:+67068653 Msa0369750:CDS
TGAAAGTCCAGAAGCGACCC+AGG 0.586084 3_1:-67064825 None:intergenic
GATGGAACTGTTGATTTCCA+CGG 0.587530 3_1:+67064449 Msa0369750:CDS
ATGGAACAGCAGGTTTGCCG+TGG 0.589059 3_1:-67064466 None:intergenic
GACATAAATGAGAGATGAGA+GGG 0.589839 3_1:-67064848 None:intergenic
GACAATAATAAACCAGCAGT+AGG 0.594102 3_1:-67065835 None:intergenic
ACAATGGCAATTGGTGCAGG+TGG 0.594161 3_1:+67065628 Msa0369750:CDS
ATATTCAAGAGAATTTAGGA+TGG 0.594332 3_1:+67065794 Msa0369750:CDS
GAAGAATTCCAATAATCCAA+TGG 0.598605 3_1:-67068917 None:intergenic
GAAACTCATGTAGATCTGAA+GGG 0.608617 3_1:-67065987 None:intergenic
ATTCAAGAGAATTTAGGATG+GGG 0.609796 3_1:+67065796 Msa0369750:CDS
ACTACCTTAGACAGAAACCT+TGG 0.616776 3_1:+67068571 Msa0369750:CDS
ATCCAAAACTGGGAAATGGA+AGG 0.616857 3_1:+67064487 Msa0369750:CDS
CACAAATGGAATTTGCAACA+AGG 0.617097 3_1:+67065564 Msa0369750:CDS
GATAGATCTAACGGTCCCCA+TGG 0.620057 3_1:-67069321 None:intergenic
GTAATGTGATTCCTCTCGGG+TGG 0.620286 3_1:-67068708 None:intergenic
ATGGAACATTGTGTTATTAG+GGG 0.621546 3_1:+67066012 Msa0369750:CDS
CAGAAAACCGGCCACCCGAG+AGG 0.625344 3_1:+67068697 Msa0369750:CDS
CTGATAAGATAACAGGAAGA+GGG 0.626089 3_1:+67069040 Msa0369750:CDS
CTACACAGCACTTTACACAA+TGG 0.627388 3_1:+67065612 Msa0369750:CDS
TACTGCATAAGCAATTGCAA+TGG 0.627930 3_1:-67068770 None:intergenic
AGACATAAATGAGAGATGAG+AGG 0.629204 3_1:-67064849 None:intergenic
CATTGGCACTGAGAGCAGCA+TGG 0.639366 3_1:-67068644 None:intergenic
ATACCAATAAGAACATATTG+TGG 0.640019 3_1:-67068877 None:intergenic
GATCCCCTACAATCGTTGCA+CGG 0.668060 3_1:+67069291 Msa0369750:three_prime_UTR
AATTTACAAACTATTACACA+GGG 0.669465 3_1:-67069480 None:intergenic
GGAATGTTAATACATGGTCA+GGG 0.669674 3_1:+67064755 Msa0369750:CDS
GCGCCGTGCAACGATTGTAG+GGG 0.684389 3_1:-67069294 None:intergenic
TTGCACGGCGCAGTGCCATG+GGG 0.685830 3_1:+67069306 Msa0369750:three_prime_UTR
ACCATATTAGGAGCATACCA+AGG 0.712720 3_1:-67068486 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTATT+TGG - chr3_1:67069377-67069396 None:intergenic 0.0%
!! TGTATATTTAATATCTTTAA+TGG + chr3_1:67064403-67064422 Msa0369750:exon 10.0%
!! AATTAATTGTTTATATTATG+GGG + chr3_1:67064582-67064601 Msa0369750:intron 10.0%
!! TTACTTATATATATTAATTC+AGG + chr3_1:67064634-67064653 Msa0369750:intron 10.0%
!! TACTTATATATATTAATTCA+GGG + chr3_1:67064635-67064654 Msa0369750:intron 10.0%
!! AAATTATGAATATTTCAAAA+AGG + chr3_1:67066189-67066208 Msa0369750:intron 10.0%
!! TCTCTAATTTAAAAAAAAAA+GGG - chr3_1:67067466-67067485 None:intergenic 10.0%
!! TTCTCTAATTTAAAAAAAAA+AGG - chr3_1:67067467-67067486 None:intergenic 10.0%
!! TTAATAAAAGAATAGTTATA+GGG - chr3_1:67067984-67068003 None:intergenic 10.0%
!! TTTAATAAAAGAATAGTTAT+AGG - chr3_1:67067985-67068004 None:intergenic 10.0%
!!! ATAAAAATATGTCAATTTTA+AGG - chr3_1:67068304-67068323 None:intergenic 10.0%
!!! TTTTTTTTTTTATTTGGATT+TGG - chr3_1:67069371-67069390 None:intergenic 10.0%
!! AAAGACAAAAATAAAGTATA+AGG - chr3_1:67064380-67064399 None:intergenic 15.0%
!! ATATATAAGTAAAAACCTAT+AGG - chr3_1:67064626-67064645 None:intergenic 15.0%
!!! ATTAGATTTGAGTTAATATT+AGG - chr3_1:67064885-67064904 None:intergenic 15.0%
!! TGAAGTTATAACTTTATAAT+CGG - chr3_1:67064911-67064930 None:intergenic 15.0%
!! ATTAATAATTCATGTTAACA+AGG - chr3_1:67064968-67064987 None:intergenic 15.0%
!!! TGATAAATAATGGTAAATTT+TGG + chr3_1:67066664-67066683 Msa0369750:intron 15.0%
!!! GATAAATAATGGTAAATTTT+GGG + chr3_1:67066665-67066684 Msa0369750:intron 15.0%
!! TTTATTTGCTTAATTAACAA+GGG + chr3_1:67066850-67066869 Msa0369750:intron 15.0%
!! TGTTATCTGAATATTAAATT+TGG + chr3_1:67066964-67066983 Msa0369750:intron 15.0%
!! GTTATCTGAATATTAAATTT+GGG + chr3_1:67066965-67066984 Msa0369750:intron 15.0%
!! TTATCTGAATATTAAATTTG+GGG + chr3_1:67066966-67066985 Msa0369750:intron 15.0%
!! GTTAAATCAAATGTAATAAT+CGG + chr3_1:67067537-67067556 Msa0369750:intron 15.0%
!! TTAAATCAAATGTAATAATC+GGG + chr3_1:67067538-67067557 Msa0369750:intron 15.0%
!!! TTTTATCATCAATATTTCTT+AGG + chr3_1:67068318-67068337 Msa0369750:intron 15.0%
!!! ATGCATGTTTTGTTAAATTT+TGG + chr3_1:67064540-67064559 Msa0369750:intron 20.0%
!! GCTATATATCATAAATAAGT+TGG - chr3_1:67065304-67065323 None:intergenic 20.0%
!! GTATATATTCAAGAGAATTT+AGG + chr3_1:67065790-67065809 Msa0369750:CDS 20.0%
!!! TCTTTGGTTATTTTCTATAT+TGG + chr3_1:67065856-67065875 Msa0369750:CDS 20.0%
!!! CTTTGGTTATTTTCTATATT+GGG + chr3_1:67065857-67065876 Msa0369750:CDS 20.0%
!! AGTGAAAAAAAAAAGACTTT+GGG - chr3_1:67066107-67066126 None:intergenic 20.0%
!! AAGTGAAAAAAAAAAGACTT+TGG - chr3_1:67066108-67066127 None:intergenic 20.0%
!! ATATTCATAATTTCATAGAC+CGG - chr3_1:67066182-67066201 None:intergenic 20.0%
!!! TTAAGAACTTGCTATTAATT+TGG - chr3_1:67066294-67066313 None:intergenic 20.0%
!! AATTGAATGAATATAGAATG+TGG + chr3_1:67066510-67066529 Msa0369750:intron 20.0%
!!! TTTTTGCTTATAATAATGAC+CGG + chr3_1:67066534-67066553 Msa0369750:intron 20.0%
!!! CTTTATTTGCTTAATTAACA+AGG + chr3_1:67066849-67066868 Msa0369750:intron 20.0%
!!! CATTTAATTTTTCGATCTAA+AGG + chr3_1:67066924-67066943 Msa0369750:intron 20.0%
!! ATATTCAGATAACATATTTG+TGG - chr3_1:67066958-67066977 None:intergenic 20.0%
!!! ATAAGTGTACAATTTTATAC+AGG + chr3_1:67067002-67067021 Msa0369750:intron 20.0%
!!! AATACACACGTTTTTTTTTT+TGG + chr3_1:67067168-67067187 Msa0369750:intron 20.0%
!!! ATACACACGTTTTTTTTTTT+GGG + chr3_1:67067169-67067188 Msa0369750:intron 20.0%
!!! ATAAAAGAGAATCACATTTT+TGG + chr3_1:67068814-67068833 Msa0369750:CDS 20.0%
!!! TTTCATACTTGTTATTTTTG+TGG - chr3_1:67069408-67069427 None:intergenic 20.0%
!! AACAAGTTAATTAAGTAGAT+AGG + chr3_1:67069427-67069446 Msa0369750:three_prime_UTR 20.0%
!! ACAAGTTAATTAAGTAGATA+GGG + chr3_1:67069428-67069447 Msa0369750:three_prime_UTR 20.0%
!! AATTTACAAACTATTACACA+GGG - chr3_1:67069483-67069502 None:intergenic 20.0%
!! TAATTTACAAACTATTACAC+AGG - chr3_1:67069484-67069503 None:intergenic 20.0%
!! TAAATTATGTGTGTAATCAA+TGG + chr3_1:67069497-67069516 Msa0369750:three_prime_UTR 20.0%
!!! ACATTGAATTTTCACAAAAT+TGG - chr3_1:67069542-67069561 None:intergenic 20.0%
! TATATATAGCATGATCCTAT+AGG + chr3_1:67064608-67064627 Msa0369750:intron 25.0%
!! AAGCATAGCAATTTAAAACA+AGG - chr3_1:67065190-67065209 None:intergenic 25.0%
!!! CATTTTTTTCCATCAATTCA+AGG - chr3_1:67065349-67065368 None:intergenic 25.0%
!! AAACCAAATATCTCAACTTT+TGG + chr3_1:67065655-67065674 Msa0369750:CDS 25.0%
! GAGGATTAAAATCATCAAAT+TGG - chr3_1:67065687-67065706 None:intergenic 25.0%
! TAAAGGCTTCTTTCTTTAAT+TGG + chr3_1:67065719-67065738 Msa0369750:CDS 25.0%
! ATATTCAAGAGAATTTAGGA+TGG + chr3_1:67065794-67065813 Msa0369750:CDS 25.0%
!! TATTCAAGAGAATTTAGGAT+GGG + chr3_1:67065795-67065814 Msa0369750:CDS 25.0%
!! TTGAAGTTTTCTATTCTTGA+AGG - chr3_1:67065956-67065975 None:intergenic 25.0%
!! AAATGGAACATTGTGTTATT+AGG + chr3_1:67066010-67066029 Msa0369750:CDS 25.0%
!! AATGGAACATTGTGTTATTA+GGG + chr3_1:67066011-67066030 Msa0369750:CDS 25.0%
!!! TTTTTTTTTCACTTTGCATG+AGG + chr3_1:67066114-67066133 Msa0369750:intron 25.0%
! ATGAATATTTCAAAAAGGTC+TGG + chr3_1:67066194-67066213 Msa0369750:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr3_1:67066425-67066444 None:intergenic 25.0%
! CATTCATTAAATGATGTATG+TGG + chr3_1:67066460-67066479 Msa0369750:intron 25.0%
! TGAGTGCATGTTTAAATTAA+CGG - chr3_1:67066618-67066637 None:intergenic 25.0%
!!! AAATTTTGGGACCATAAAAT+TGG + chr3_1:67066678-67066697 Msa0369750:intron 25.0%
! ATGAATGTGAATATAGAAAG+TGG + chr3_1:67066744-67066763 Msa0369750:intron 25.0%
!!! AATAATCCTTAGTTTTTGTG+GGG - chr3_1:67067044-67067063 None:intergenic 25.0%
!!! CAATAATCCTTAGTTTTTGT+GGG - chr3_1:67067045-67067064 None:intergenic 25.0%
! ATTACTTGAGTTAAGATTTG+TGG - chr3_1:67067502-67067521 None:intergenic 25.0%
!!! TCTGAATTTTAGTTGAGTAT+TGG + chr3_1:67067862-67067881 Msa0369750:intron 25.0%
!!! GTTGAGTATTGGTATTTTAT+AGG + chr3_1:67067873-67067892 Msa0369750:intron 25.0%
!! ACTTGAGTTTAGTTTAGTAT+CGG - chr3_1:67068129-67068148 None:intergenic 25.0%
!! CTTAATTTGATAACCAATTC+AGG + chr3_1:67068368-67068387 Msa0369750:intron 25.0%
! ACAACCAAAATATACTCATA+GGG - chr3_1:67068855-67068874 None:intergenic 25.0%
! AACAACCAAAATATACTCAT+AGG - chr3_1:67068856-67068875 None:intergenic 25.0%
! TTACCACAATATGTTCTTAT+TGG + chr3_1:67068874-67068893 Msa0369750:CDS 25.0%
! ATACCAATAAGAACATATTG+TGG - chr3_1:67068880-67068899 None:intergenic 25.0%
!!! GAATTTCTTGAACAGTTTTT+TGG + chr3_1:67069008-67069027 Msa0369750:CDS 25.0%
! TCTCACTTAGATTACTATTA+TGG + chr3_1:67069099-67069118 Msa0369750:CDS 25.0%
! CTCACTTAGATTACTATTAT+GGG + chr3_1:67069100-67069119 Msa0369750:CDS 25.0%
!!! TTAATTTGTTGGTGTTTTTG+TGG + chr3_1:67069145-67069164 Msa0369750:CDS 25.0%
!!! TAATTTGTTGGTGTTTTTGT+GGG + chr3_1:67069146-67069165 Msa0369750:CDS 25.0%
! AAGTAGATACATTTACAAGA+AGG + chr3_1:67069173-67069192 Msa0369750:CDS 25.0%
!! TTTTCTCTAGATAGATCTAA+CGG - chr3_1:67069333-67069352 None:intergenic 25.0%
!! TCTAGAGAAAATTTCAAGTA+TGG + chr3_1:67069342-67069361 Msa0369750:three_prime_UTR 25.0%
AAGATACTGTTTCATCAGTT+AGG + chr3_1:67064734-67064753 Msa0369750:CDS 30.0%
CAGTTAGGAATGTTAATACA+TGG + chr3_1:67064749-67064768 Msa0369750:CDS 30.0%
TAACTTCATAACCACTTGTT+TGG + chr3_1:67064923-67064942 Msa0369750:intron 30.0%
TTGGACCATAAGACAATTAA+AGG + chr3_1:67064942-67064961 Msa0369750:intron 30.0%
AAATTGCTATGCTTACCAAT+TGG + chr3_1:67065196-67065215 Msa0369750:intron 30.0%
! TTTTTCCATCAATTCAAGGT+GGG - chr3_1:67065345-67065364 None:intergenic 30.0%
!!! TTTTTTCCATCAATTCAAGG+TGG - chr3_1:67065346-67065365 None:intergenic 30.0%
!! TGGATGTTTACCTCATTTTT+AGG + chr3_1:67065742-67065761 Msa0369750:CDS 30.0%
! AATTAAGGCACCTAAAAATG+AGG - chr3_1:67065755-67065774 None:intergenic 30.0%
! ATTCAAGAGAATTTAGGATG+GGG + chr3_1:67065796-67065815 Msa0369750:CDS 30.0%
!! TGCTGGTTTATTATTGTCTT+TGG + chr3_1:67065840-67065859 Msa0369750:CDS 30.0%
! CTAACTTTGTGTCGATAAAT+TGG - chr3_1:67065886-67065905 None:intergenic 30.0%
CAATTTATCGACACAAAGTT+AGG + chr3_1:67065884-67065903 Msa0369750:CDS 30.0%
AGATCTACATGAGTTTCAAA+TGG + chr3_1:67065993-67066012 Msa0369750:CDS 30.0%
! ATGGAACATTGTGTTATTAG+GGG + chr3_1:67066012-67066031 Msa0369750:CDS 30.0%
! ATTGTGTTATTAGGGGAAAA+AGG + chr3_1:67066019-67066038 Msa0369750:CDS 30.0%
TTTGTAAGACATTCTCAAAC+CGG + chr3_1:67066160-67066179 Msa0369750:intron 30.0%
TATCAGTCCTTCTCAAAATA+TGG + chr3_1:67066230-67066249 Msa0369750:intron 30.0%
ACTCTATTAAACTGTCAAGT+TGG - chr3_1:67066340-67066359 None:intergenic 30.0%
CATTGTGAAACATAGTGATT+TGG - chr3_1:67066589-67066608 None:intergenic 30.0%
! CTTTTCTCCATCCAATTTTA+TGG - chr3_1:67066692-67066711 None:intergenic 30.0%
CATAAAATTGGATGGAGAAA+AGG + chr3_1:67066690-67066709 Msa0369750:intron 30.0%
ATTTGCTTAATTAACAAGGG+TGG + chr3_1:67066853-67066872 Msa0369750:intron 30.0%
TTTGCTTAATTAACAAGGGT+GGG + chr3_1:67066854-67066873 Msa0369750:intron 30.0%
!! CCAATAATCCTTAGTTTTTG+TGG - chr3_1:67067046-67067065 None:intergenic 30.0%
CCACAAAAACTAAGGATTAT+TGG + chr3_1:67067043-67067062 Msa0369750:intron 30.0%
ATGATGTTTGAGCAGTAAAA+TGG - chr3_1:67067079-67067098 None:intergenic 30.0%
!!! ACATTTTTTTAGAGGTACTG+CGG - chr3_1:67067130-67067149 None:intergenic 30.0%
TTGCAATTTATCTGCATTCA+GGG - chr3_1:67067242-67067261 None:intergenic 30.0%
TTTGCAATTTATCTGCATTC+AGG - chr3_1:67067243-67067262 None:intergenic 30.0%
ACTAACAAAGTCTTCATTCA+GGG - chr3_1:67067271-67067290 None:intergenic 30.0%
TTTGCATATTATCTGCATTC+AGG + chr3_1:67067391-67067410 Msa0369750:intron 30.0%
TTGCATATTATCTGCATTCA+GGG + chr3_1:67067392-67067411 Msa0369750:intron 30.0%
AAAGAAAAGTGAATGAGTTG+AGG - chr3_1:67067571-67067590 None:intergenic 30.0%
!! TTTTTGGTAGATAGACGAAA+TGG - chr3_1:67067614-67067633 None:intergenic 30.0%
!!! AACTTGCATCGTTCTTTTTT+TGG - chr3_1:67067630-67067649 None:intergenic 30.0%
CCATATATGGAAAAACAACT+AGG - chr3_1:67067702-67067721 None:intergenic 30.0%
!!! CCTAGTTGTTTTTCCATATA+TGG + chr3_1:67067699-67067718 Msa0369750:intron 30.0%
! TGTGACACATTTTCCATATA+TGG - chr3_1:67067715-67067734 None:intergenic 30.0%
ATAGTGAACAATCTTGTCTT+TGG - chr3_1:67067760-67067779 None:intergenic 30.0%
TATCAAGCATATCCCATTTA+AGG + chr3_1:67068051-67068070 Msa0369750:intron 30.0%
AAAACAACCAAGCCTTAAAT+GGG - chr3_1:67068066-67068085 None:intergenic 30.0%
AAATCAAGTGCGTATCTATT+TGG + chr3_1:67068156-67068175 Msa0369750:intron 30.0%
!! TGATAACCAATTCAGGTTTT+TGG + chr3_1:67068375-67068394 Msa0369750:intron 30.0%
ATTAAAGAAGATCCTACAAC+TGG + chr3_1:67068409-67068428 Msa0369750:CDS 30.0%
TCTACTTGATTTACTGTCAT+TGG - chr3_1:67068451-67068470 None:intergenic 30.0%
ATGACAGTAAATCAAGTAGA+AGG + chr3_1:67068451-67068470 Msa0369750:CDS 30.0%
! TCAGTGTTACTAACCATATT+AGG - chr3_1:67068501-67068520 None:intergenic 30.0%
! AACACTCTTTTTGTGAAACA+AGG + chr3_1:67068547-67068566 Msa0369750:CDS 30.0%
ATCACATTACTTCAAAGACT+TGG + chr3_1:67068721-67068740 Msa0369750:CDS 30.0%
TTACTTCAAAGACTTGGAAT+AGG + chr3_1:67068727-67068746 Msa0369750:CDS 30.0%
! TTGTCCCTATGAGTATATTT+TGG + chr3_1:67068848-67068867 Msa0369750:CDS 30.0%
TTTCAATGCCATTGGATTAT+TGG + chr3_1:67068909-67068928 Msa0369750:CDS 30.0%
GAAGAATTCCAATAATCCAA+TGG - chr3_1:67068920-67068939 None:intergenic 30.0%
ACAATGACTGATAAGATAAC+AGG + chr3_1:67069033-67069052 Msa0369750:CDS 30.0%
!! CTTGTCAAGTGTTAATTTGT+TGG + chr3_1:67069134-67069153 Msa0369750:CDS 30.0%
AATGGAAGGTAATTCAACTT+TGG + chr3_1:67069230-67069249 Msa0369750:CDS 30.0%
GTATAGTACATTGTTGAATG+AGG - chr3_1:67069650-67069669 None:intergenic 30.0%
ATCATGGGTATAGTCTTCTT+TGG - chr3_1:67064432-67064451 None:intergenic 35.0%
AAAGAAGACTATACCCATGA+TGG + chr3_1:67064431-67064450 Msa0369750:CDS 35.0%
GAAATCAACAGTTCCATCAT+GGG - chr3_1:67064447-67064466 None:intergenic 35.0%
! GTATGAAGCATTTGAAAGGA+TGG + chr3_1:67064657-67064676 Msa0369750:CDS 35.0%
CTTCATGAAGTTGTGTTGTA+AGG - chr3_1:67064717-67064736 None:intergenic 35.0%
AGGAATGTTAATACATGGTC+AGG + chr3_1:67064754-67064773 Msa0369750:CDS 35.0%
GGAATGTTAATACATGGTCA+GGG + chr3_1:67064755-67064774 Msa0369750:CDS 35.0%
GTTTGGATAACACCAATTCT+TGG + chr3_1:67064781-67064800 Msa0369750:CDS 35.0%
TTACATTGCAGATTCTTACC+TGG + chr3_1:67064807-67064826 Msa0369750:CDS 35.0%
TACATTGCAGATTCTTACCT+GGG + chr3_1:67064808-67064827 Msa0369750:CDS 35.0%
GACATAAATGAGAGATGAGA+GGG - chr3_1:67064851-67064870 None:intergenic 35.0%
AGACATAAATGAGAGATGAG+AGG - chr3_1:67064852-67064871 None:intergenic 35.0%
CTCATCTCTCATTTATGTCT+TGG + chr3_1:67064852-67064871 Msa0369750:CDS 35.0%
CAAGGCCTTTAATTGTCTTA+TGG - chr3_1:67064950-67064969 None:intergenic 35.0%
TTAACGCTGCTATGTTCTTA+AGG - chr3_1:67065022-67065041 None:intergenic 35.0%
CAAGACGAGTAAAACCATAA+TGG - chr3_1:67065069-67065088 None:intergenic 35.0%
AATGACTCGAATGATCACTT+TGG + chr3_1:67065369-67065388 Msa0369750:intron 35.0%
!! CTTTGGTTACCTCATTTTTG+TGG + chr3_1:67065386-67065405 Msa0369750:intron 35.0%
TTGAAACCAACATGCACAAA+TGG + chr3_1:67065550-67065569 Msa0369750:CDS 35.0%
CAAATTCCATTTGTGCATGT+TGG - chr3_1:67065559-67065578 None:intergenic 35.0%
CACAAATGGAATTTGCAACA+AGG + chr3_1:67065564-67065583 Msa0369750:CDS 35.0%
GCACCAAAAGTTGAGATATT+TGG - chr3_1:67065661-67065680 None:intergenic 35.0%
TCCTCATGAGAAAGAGTTAA+AGG + chr3_1:67065702-67065721 Msa0369750:CDS 35.0%
AGGCTTCTTTCTTTAATTGG+TGG + chr3_1:67065722-67065741 Msa0369750:CDS 35.0%
GTGCCTTAATTGCAACTTTA+GGG + chr3_1:67065764-67065783 Msa0369750:CDS 35.0%
AAGCCCTAAAGTTGCAATTA+AGG - chr3_1:67065770-67065789 None:intergenic 35.0%
GACAATAATAAACCAGCAGT+AGG - chr3_1:67065838-67065857 None:intergenic 35.0%
ACACGAATTATATCCTTAGC+AGG - chr3_1:67065922-67065941 None:intergenic 35.0%
GAAACTCATGTAGATCTGAA+GGG - chr3_1:67065990-67066009 None:intergenic 35.0%
TGAAACTCATGTAGATCTGA+AGG - chr3_1:67065991-67066010 None:intergenic 35.0%
AGTCCTTCTCAAAATATGGT+AGG + chr3_1:67066234-67066253 Msa0369750:intron 35.0%
GTCCTTCTCAAAATATGGTA+GGG + chr3_1:67066235-67066254 Msa0369750:intron 35.0%
GGGACTAAATTGATAGAAGA+TGG + chr3_1:67066255-67066274 Msa0369750:intron 35.0%
TTGCTTATAATAATGACCGG+AGG + chr3_1:67066537-67066556 Msa0369750:intron 35.0%
TGCTTATAATAATGACCGGA+GGG + chr3_1:67066538-67066557 Msa0369750:intron 35.0%
TAAACATGCACTCATTCTAG+TGG + chr3_1:67066624-67066643 Msa0369750:intron 35.0%
TTTGTGGGGGTGATAAATAA+TGG + chr3_1:67066654-67066673 Msa0369750:intron 35.0%
! TTTGGGACCATAAAATTGGA+TGG + chr3_1:67066682-67066701 Msa0369750:intron 35.0%
TGGGCCAAGACATTAAAAAT+GGG - chr3_1:67066794-67066813 None:intergenic 35.0%
TTGCTTAATTAACAAGGGTG+GGG + chr3_1:67066855-67066874 Msa0369750:intron 35.0%
AAAATGCCCCACAAAAACTA+AGG + chr3_1:67067035-67067054 Msa0369750:intron 35.0%
!!! GTGGCTACACATTTTTTTAG+AGG - chr3_1:67067138-67067157 None:intergenic 35.0%
GACTAACAAAGTCTTCATTC+AGG - chr3_1:67067272-67067291 None:intergenic 35.0%
TCAGGGACTAAATTGACTAA+CGG - chr3_1:67067286-67067305 None:intergenic 35.0%
ACTAACGAAGTCTACATTCA+GGG - chr3_1:67067335-67067354 None:intergenic 35.0%
TAGTGACCAATCATTCAAGT+CGG - chr3_1:67067670-67067689 None:intergenic 35.0%
ATACACTTGGAATGCATATG+TGG - chr3_1:67067783-67067802 None:intergenic 35.0%
TATGCGTGTAACTATACACT+TGG - chr3_1:67067796-67067815 None:intergenic 35.0%
AAGTGTATAGTTACACGCAT+AGG + chr3_1:67067795-67067814 Msa0369750:intron 35.0%
TATAGTTACACGCATAGGAT+AGG + chr3_1:67067800-67067819 Msa0369750:intron 35.0%
CAAAACAACCAAGCCTTAAA+TGG - chr3_1:67068067-67068086 None:intergenic 35.0%
TATCGGATCGAGATATAACT+CGG - chr3_1:67068112-67068131 None:intergenic 35.0%
CTTTGTCCAAAAACCTGAAT+TGG - chr3_1:67068384-67068403 None:intergenic 35.0%
!!! GGATTTTAAAATCAGGACCA+AGG - chr3_1:67068591-67068610 None:intergenic 35.0%
TGAAGTAATGTGATTCCTCT+CGG - chr3_1:67068715-67068734 None:intergenic 35.0%
TACTGCATAAGCAATTGCAA+TGG - chr3_1:67068773-67068792 None:intergenic 35.0%
CTCATAGGGACAATATCTTT+AGG - chr3_1:67068841-67068860 None:intergenic 35.0%
ACTTTCTTCACAAGTGGAAT+TGG + chr3_1:67068979-67068998 Msa0369750:CDS 35.0%
ACTGATAAGATAACAGGAAG+AGG + chr3_1:67069039-67069058 Msa0369750:CDS 35.0%
CTGATAAGATAACAGGAAGA+GGG + chr3_1:67069040-67069059 Msa0369750:CDS 35.0%
!! AGAAGCACTTTGTGTTCAAA+TGG + chr3_1:67069212-67069231 Msa0369750:CDS 35.0%
GGAAATCAACAGTTCCATCA+TGG - chr3_1:67064448-67064467 None:intergenic 40.0%
!! GATGGAACTGTTGATTTCCA+CGG + chr3_1:67064449-67064468 Msa0369750:CDS 40.0%
TTCCATCCAAAACTGGGAAA+TGG + chr3_1:67064483-67064502 Msa0369750:CDS 40.0%
!!! TTCCATTTCCCAGTTTTGGA+TGG - chr3_1:67064488-67064507 None:intergenic 40.0%
ATCCAAAACTGGGAAATGGA+AGG + chr3_1:67064487-67064506 Msa0369750:CDS 40.0%
! AAGGCTTGTGCTTTTCTTGT+TGG + chr3_1:67064506-67064525 Msa0369750:CDS 40.0%
! CAGGGTATGAAGCATTTGAA+AGG + chr3_1:67064653-67064672 Msa0369750:intron 40.0%
TTTGAAAGGATGGCCTTCTA+TGG + chr3_1:67064667-67064686 Msa0369750:CDS 40.0%
GTTTGATGCAACTCCATAGA+AGG - chr3_1:67064683-67064702 None:intergenic 40.0%
CTATGGAGTTGCATCAAACT+TGG + chr3_1:67064684-67064703 Msa0369750:CDS 40.0%
GCAATGTAAGCACCAAGAAT+TGG - chr3_1:67064796-67064815 None:intergenic 40.0%
TGTCTTATGGTCCAAACAAG+TGG - chr3_1:67064937-67064956 None:intergenic 40.0%
GTAGAGTTTGCGTTCCATTA+TGG + chr3_1:67065052-67065071 Msa0369750:intron 40.0%
GTGGACAAATTAGCTCCAAT+TGG - chr3_1:67065214-67065233 None:intergenic 40.0%
TTTGTCCCACCTTGAATTGA+TGG + chr3_1:67065337-67065356 Msa0369750:intron 40.0%
ATCACTGTGCCACAAAAATG+AGG - chr3_1:67065398-67065417 None:intergenic 40.0%
TTAATTCCTCTACACGTCAC+AGG + chr3_1:67065489-67065508 Msa0369750:intron 40.0%
TAATTCCTCTACACGTCACA+GGG + chr3_1:67065490-67065509 Msa0369750:intron 40.0%
CTACACAGCACTTTACACAA+TGG + chr3_1:67065612-67065631 Msa0369750:CDS 40.0%
GCACTTTACACAATGGCAAT+TGG + chr3_1:67065619-67065638 Msa0369750:CDS 40.0%
GCCTTTAACTCTTTCTCATG+AGG - chr3_1:67065706-67065725 None:intergenic 40.0%
GGTGCCTTAATTGCAACTTT+AGG + chr3_1:67065763-67065782 Msa0369750:CDS 40.0%
GACATCTAAAAGTCCTGCTA+AGG + chr3_1:67065906-67065925 Msa0369750:CDS 40.0%
TGTAGATCTGAAGGGTTACT+AGG - chr3_1:67065982-67066001 None:intergenic 40.0%
TCTATCACACTCCAACTTTG+AGG + chr3_1:67066046-67066065 Msa0369750:CDS 40.0%
ACACTTGCTTACCTCAAAGT+TGG - chr3_1:67066060-67066079 None:intergenic 40.0%
!! GTCCCTACCATATTTTGAGA+AGG - chr3_1:67066240-67066259 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr3_1:67066421-67066440 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr3_1:67066422-67066441 None:intergenic 40.0%
GGACACGTAATCTTAAGACA+CGG - chr3_1:67066771-67066790 None:intergenic 40.0%
!! GTCCCCCATTTTTAATGTCT+TGG + chr3_1:67066787-67066806 Msa0369750:intron 40.0%
GGCCAAGACATTAAAAATGG+GGG - chr3_1:67066792-67066811 None:intergenic 40.0%
GGGCCAAGACATTAAAAATG+GGG - chr3_1:67066793-67066812 None:intergenic 40.0%
GTGGGCCAAGACATTAAAAA+TGG - chr3_1:67066795-67066814 None:intergenic 40.0%
!! TAAGTTAAGTTGACTGCCTG+TGG - chr3_1:67066817-67066836 None:intergenic 40.0%
GTGTGTATTCTCTACTTCAG+TGG - chr3_1:67067157-67067176 None:intergenic 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + chr3_1:67067195-67067214 Msa0369750:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + chr3_1:67067196-67067215 Msa0369750:intron 40.0%
GACTAACGAAGTCTACATTC+AGG - chr3_1:67067336-67067355 None:intergenic 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - chr3_1:67067196-67067215 None:intergenic 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - chr3_1:67067195-67067214 None:intergenic 40.0%
! CAAGTTGTTTCCTCCATATG+AGG + chr3_1:67067644-67067663 Msa0369750:intron 40.0%
CTTGTCTTTGGCATGCAAAA+TGG - chr3_1:67067748-67067767 None:intergenic 40.0%
! AGCATATCCCATTTAAGGCT+TGG + chr3_1:67068056-67068075 Msa0369750:intron 40.0%
TCCTTGGTATGCTCCTAATA+TGG + chr3_1:67068485-67068504 Msa0369750:CDS 40.0%
! ACCATATTAGGAGCATACCA+AGG - chr3_1:67068489-67068508 None:intergenic 40.0%
! ACTGATTCCAAGCACCATTT+GGG + chr3_1:67068516-67068535 Msa0369750:CDS 40.0%
!! AGTGTTGATTTGTGCCCAAA+TGG - chr3_1:67068533-67068552 None:intergenic 40.0%
ACTACCTTAGACAGAAACCT+TGG + chr3_1:67068571-67068590 Msa0369750:CDS 40.0%
!!! GCTGCTGGGATTTTAAAATC+AGG - chr3_1:67068598-67068617 None:intergenic 40.0%
ACGAAAAACCGGTCATACAT+TGG - chr3_1:67068664-67068683 None:intergenic 40.0%
GAAGTAATGTGATTCCTCTC+GGG - chr3_1:67068714-67068733 None:intergenic 40.0%
CAATTGCAATGGCTATGATC+TGG - chr3_1:67068762-67068781 None:intergenic 40.0%
! GCAGATGTTTTCAATGCCAT+TGG + chr3_1:67068901-67068920 Msa0369750:CDS 40.0%
GGAACAACTTTCTTCACAAG+TGG + chr3_1:67068973-67068992 Msa0369750:CDS 40.0%
TTCACAAGTGGAATTGGTGT+TGG + chr3_1:67068985-67069004 Msa0369750:CDS 40.0%
! TCACAAGTGGAATTGGTGTT+GGG + chr3_1:67068986-67069005 Msa0369750:CDS 40.0%
GCACTTTGTGTTCAAATGGA+AGG + chr3_1:67069216-67069235 Msa0369750:CDS 40.0%
TCAACTTTGGATGCATCTCT+TGG + chr3_1:67069243-67069262 Msa0369750:CDS 40.0%
TCTTGGCTTACAAGTATGAG+AGG + chr3_1:67069260-67069279 Msa0369750:exon 40.0%
CTGCTGTTCCATCCAAAACT+GGG + chr3_1:67064477-67064496 Msa0369750:CDS 45.0%
! AGCCTTCCATTTCCCAGTTT+TGG - chr3_1:67064492-67064511 None:intergenic 45.0%
ATACATGGTCAGGGTCTGTT+TGG + chr3_1:67064764-67064783 Msa0369750:CDS 45.0%
TTGTCCACAAATTGCACTCG+TGG + chr3_1:67065226-67065245 Msa0369750:intron 45.0%
TGTCCACAAATTGCACTCGT+GGG + chr3_1:67065227-67065246 Msa0369750:intron 45.0%
TATCCCACGAGTGCAATTTG+TGG - chr3_1:67065233-67065252 None:intergenic 45.0%
TACACAATGGCAATTGGTGC+AGG + chr3_1:67065625-67065644 Msa0369750:CDS 45.0%
! GAGAATTTAGGATGGGGACT+TGG + chr3_1:67065802-67065821 Msa0369750:CDS 45.0%
TTAGGATGGGGACTTGGATA+TGG + chr3_1:67065808-67065827 Msa0369750:CDS 45.0%
GGATATGGTATTCCTACTGC+TGG + chr3_1:67065823-67065842 Msa0369750:CDS 45.0%
CTGATTGACAATACACCCTC+CGG + chr3_1:67066403-67066422 Msa0369750:intron 45.0%
!!! GTGTTGTTTTGTACACCCTC+CGG - chr3_1:67066556-67066575 None:intergenic 45.0%
TGCACTCATTCTAGTGGTAG+TGG + chr3_1:67066630-67066649 Msa0369750:intron 45.0%
!! TTCTAGTGGTAGTGGCTTTG+TGG + chr3_1:67066638-67066657 Msa0369750:intron 45.0%
!! TCTAGTGGTAGTGGCTTTGT+GGG + chr3_1:67066639-67066658 Msa0369750:intron 45.0%
!! TTAAGTTGACTGCCTGTGGT+GGG - chr3_1:67066813-67066832 None:intergenic 45.0%
! TTAACAAGGGTGGGGTATCA+AGG + chr3_1:67066863-67066882 Msa0369750:intron 45.0%
! TAACAAGGGTGGGGTATCAA+GGG + chr3_1:67066864-67066883 Msa0369750:intron 45.0%
! GTCACTTTAGTCCCTGAATG+GGG + chr3_1:67067197-67067216 Msa0369750:intron 45.0%
ACTAACGGAGTCTGCATTCA+GGG - chr3_1:67067303-67067322 None:intergenic 45.0%
TCCCTGAAATTGACCATGCA+GGG + chr3_1:67067363-67067382 Msa0369750:intron 45.0%
TCCCTGCATGGTCAATTTCA+GGG - chr3_1:67067367-67067386 None:intergenic 45.0%
TATGCAAAACAGTCCCTGCA+TGG - chr3_1:67067379-67067398 None:intergenic 45.0%
! GTCACTTTAGTCCCTGAATG+GGG - chr3_1:67067197-67067216 None:intergenic 45.0%
TCATTCAAGTCGGCCTCATA+TGG - chr3_1:67067660-67067679 None:intergenic 45.0%
!! ATGAGGCCGACTTGAATGAT+TGG + chr3_1:67067661-67067680 Msa0369750:intron 45.0%
GTCTTTGGCATGCAAAATGG+TGG - chr3_1:67067745-67067764 None:intergenic 45.0%
CTTCTTGAGGAACCAGTTGT+AGG - chr3_1:67068424-67068443 None:intergenic 45.0%
! TGTCATTGGTGCTCTTCTTG+AGG - chr3_1:67068437-67068456 None:intergenic 45.0%
GAAGGAGCAAAGCTAATCCT+TGG + chr3_1:67068469-67068488 Msa0369750:CDS 45.0%
!! CACTGATTCCAAGCACCATT+TGG + chr3_1:67068515-67068534 Msa0369750:CDS 45.0%
ATTTGTGCCCAAATGGTGCT+TGG - chr3_1:67068526-67068545 None:intergenic 45.0%
AGGACCAAGGTTTCTGTCTA+AGG - chr3_1:67068578-67068597 None:intergenic 45.0%
AAAATCCCAGCAGCATCTCT+AGG + chr3_1:67068604-67068623 Msa0369750:CDS 45.0%
TCTCAGTGCCAATGTATGAC+CGG + chr3_1:67068653-67068672 Msa0369750:CDS 45.0%
GCATGAACGGTACGAAAAAC+CGG - chr3_1:67068675-67068694 None:intergenic 45.0%
CCAAGACTTTGCATGTCTTC+AGG - chr3_1:67068955-67068974 None:intergenic 45.0%
CCTGAAGACATGCAAAGTCT+TGG + chr3_1:67068952-67068971 Msa0369750:CDS 45.0%
GAAGAGGGACTAGAAAGAGT+TGG + chr3_1:67069055-67069074 Msa0369750:CDS 45.0%
!! TTAATTAATTGTTTATATTA+TGG + chr3_1:67064580-67064599 Msa0369750:intron 5.0%
!! TAATTAATTGTTTATATTAT+GGG + chr3_1:67064581-67064600 Msa0369750:intron 5.0%
!! AAAAAAAAAAAAAAAAGATT+TGG + chr3_1:67069381-67069400 Msa0369750:three_prime_UTR 5.0%
!!! CCAGTTTTGGATGGAACAGC+AGG - chr3_1:67064479-67064498 None:intergenic 50.0%
CCTGCTGTTCCATCCAAAAC+TGG + chr3_1:67064476-67064495 Msa0369750:CDS 50.0%
ATTCTTACCTGGGTCGCTTC+TGG + chr3_1:67064818-67064837 Msa0369750:CDS 50.0%
TCATTCCCTGTGACGTGTAG+AGG - chr3_1:67065498-67065517 None:intergenic 50.0%
ACAATGGCAATTGGTGCAGG+TGG + chr3_1:67065628-67065647 Msa0369750:CDS 50.0%
!! CTAGTGGTAGTGGCTTTGTG+GGG + chr3_1:67066640-67066659 Msa0369750:intron 50.0%
!! TAGTGGTAGTGGCTTTGTGG+GGG + chr3_1:67066641-67066660 Msa0369750:intron 50.0%
TTAATGTCTTGGCCCACCAC+AGG + chr3_1:67066798-67066817 Msa0369750:intron 50.0%
!! GTTAAGTTGACTGCCTGTGG+TGG - chr3_1:67066814-67066833 None:intergenic 50.0%
GACGAATCGTTCCCCATTCA+GGG - chr3_1:67067423-67067442 None:intergenic 50.0%
TGACGAATCGTTCCCCATTC+AGG - chr3_1:67067422-67067441 None:intergenic 50.0%
GACTAACGGAGTCTGCATTC+AGG - chr3_1:67067304-67067323 None:intergenic 50.0%
GTCCCTGAAATTGACCATGC+AGG + chr3_1:67067362-67067381 Msa0369750:intron 50.0%
GTCCCTGCATGGTCAATTTC+AGG - chr3_1:67067368-67067387 None:intergenic 50.0%
TGACGAATCGTTCCCCATTC+AGG + chr3_1:67067422-67067441 Msa0369750:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG + chr3_1:67067423-67067442 Msa0369750:intron 50.0%
TTCAAGTCGGCCTCATATGG+AGG - chr3_1:67067657-67067676 None:intergenic 50.0%
CACTGAGAGCAGCATGGATA+GGG - chr3_1:67068641-67068660 None:intergenic 50.0%
GTAATGTGATTCCTCTCGGG+TGG - chr3_1:67068711-67068730 None:intergenic 50.0%
GATCCCCTACAATCGTTGCA+CGG + chr3_1:67069291-67069310 Msa0369750:three_prime_UTR 50.0%
GATAGATCTAACGGTCCCCA+TGG - chr3_1:67069324-67069343 None:intergenic 50.0%
ATGGAACAGCAGGTTTGCCG+TGG - chr3_1:67064469-67064488 None:intergenic 55.0%
TGAAAGTCCAGAAGCGACCC+AGG - chr3_1:67064828-67064847 None:intergenic 55.0%
AGCTGCCTAGAGATGCTGCT+GGG - chr3_1:67068612-67068631 None:intergenic 55.0%
AAGCTGCCTAGAGATGCTGC+TGG - chr3_1:67068613-67068632 None:intergenic 55.0%
GCACTGAGAGCAGCATGGAT+AGG - chr3_1:67068642-67068661 None:intergenic 55.0%
! CATTGGCACTGAGAGCAGCA+TGG - chr3_1:67068647-67068666 None:intergenic 55.0%
!! CCGGTTTTCTGGCGCATGAA+CGG - chr3_1:67068688-67068707 None:intergenic 55.0%
CCGTTCATGCGCCAGAAAAC+CGG + chr3_1:67068685-67068704 Msa0369750:CDS 55.0%
TGCGCCGTGCAACGATTGTA+GGG - chr3_1:67069298-67069317 None:intergenic 55.0%
! CAAGGGTGGGGTATCAAGGG+TGG + chr3_1:67066867-67066886 Msa0369750:intron 60.0%
TGTGATTCCTCTCGGGTGGC+CGG - chr3_1:67068707-67068726 None:intergenic 60.0%
GCGCCGTGCAACGATTGTAG+GGG - chr3_1:67069297-67069316 None:intergenic 60.0%
CTGCGCCGTGCAACGATTGT+AGG - chr3_1:67069299-67069318 None:intergenic 60.0%
!! CTCTCGGGTGGCCGGTTTTC+TGG - chr3_1:67068699-67068718 None:intergenic 65.0%
CAGAAAACCGGCCACCCGAG+AGG + chr3_1:67068697-67068716 Msa0369750:CDS 65.0%
GTTGCACGGCGCAGTGCCAT+GGG + chr3_1:67069305-67069324 Msa0369750:three_prime_UTR 65.0%
TTGCACGGCGCAGTGCCATG+GGG + chr3_1:67069306-67069325 Msa0369750:three_prime_UTR 65.0%
CGTTGCACGGCGCAGTGCCA+TGG + chr3_1:67069304-67069323 Msa0369750:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 67064350 67069678 67064350 ID=Msa0369750;Name=Msa0369750
chr3_1 mRNA 67064350 67069678 67064350 ID=Msa0369750-mRNA-1;Parent=Msa0369750;Name=Msa0369750-mRNA-1;_AED=0.13;_eAED=0.13;_QI=72|1|1|1|1|1|4|400|589
chr3_1 exon 67064350 67064527 67064350 ID=Msa0369750-mRNA-1:exon:13697;Parent=Msa0369750-mRNA-1
chr3_1 exon 67064656 67064873 67064656 ID=Msa0369750-mRNA-1:exon:13698;Parent=Msa0369750-mRNA-1
chr3_1 exon 67065511 67066067 67065511 ID=Msa0369750-mRNA-1:exon:13699;Parent=Msa0369750-mRNA-1
chr3_1 exon 67068390 67069678 67068390 ID=Msa0369750-mRNA-1:exon:13700;Parent=Msa0369750-mRNA-1
chr3_1 five_prime_UTR 67064350 67064421 67064350 ID=Msa0369750-mRNA-1:five_prime_utr;Parent=Msa0369750-mRNA-1
chr3_1 CDS 67064422 67064527 67064422 ID=Msa0369750-mRNA-1:cds;Parent=Msa0369750-mRNA-1
chr3_1 CDS 67064656 67064873 67064656 ID=Msa0369750-mRNA-1:cds;Parent=Msa0369750-mRNA-1
chr3_1 CDS 67065511 67066067 67065511 ID=Msa0369750-mRNA-1:cds;Parent=Msa0369750-mRNA-1
chr3_1 CDS 67068390 67069278 67068390 ID=Msa0369750-mRNA-1:cds;Parent=Msa0369750-mRNA-1
chr3_1 three_prime_UTR 67069279 67069678 67069279 ID=Msa0369750-mRNA-1:three_prime_utr;Parent=Msa0369750-mRNA-1
Gene Sequence

>Msa0369750

ATGGAAGCCAAAGAAGACTATACCCATGATGGAACTGTTGATTTCCACGGCAAACCTGCTGTTCCATCCAAAACTGGGAAATGGAAGGCTTGTGCTTTTCTTGTTGGGTATGAAGCATTTGAAAGGATGGCCTTCTATGGAGTTGCATCAAACTTGGTGAATTACCTTACAACACAACTTCATGAAGATACTGTTTCATCAGTTAGGAATGTTAATACATGGTCAGGGTCTGTTTGGATAACACCAATTCTTGGTGCTTACATTGCAGATTCTTACCTGGGTCGCTTCTGGACTTTCACCCTCTCATCTCTCATTTATGTCTTGGGAATGACACTTCTTACTATAGCTGTATCACTCAAGAGCTTGAAACCAACATGCACAAATGGAATTTGCAACAAGGCTTCAACATCACAAATTACATTTTTCTACACAGCACTTTACACAATGGCAATTGGTGCAGGTGGAACAAAACCAAATATCTCAACTTTTGGTGCTGACCAATTTGATGATTTTAATCCTCATGAGAAAGAGTTAAAGGCTTCTTTCTTTAATTGGTGGATGTTTACCTCATTTTTAGGTGCCTTAATTGCAACTTTAGGGCTTGTATATATTCAAGAGAATTTAGGATGGGGACTTGGATATGGTATTCCTACTGCTGGTTTATTATTGTCTTTGGTTATTTTCTATATTGGGACACCAATTTATCGACACAAAGTTAGGACATCTAAAAGTCCTGCTAAGGATATAATTCGTGTCTTTATTGTTGCCTTCAAGAATAGAAAACTTCAACTTCCTAGTAACCCTTCAGATCTACATGAGTTTCAAATGGAACATTGTGTTATTAGGGGAAAAAGGCAAGTCTATCACACTCCAACTTTGAGGTTTTTGGACAAAGCTGCTATTAAAGAAGATCCTACAACTGGTTCCTCAAGAAGAGCACCAATGACAGTAAATCAAGTAGAAGGAGCAAAGCTAATCCTTGGTATGCTCCTAATATGGTTAGTAACACTGATTCCAAGCACCATTTGGGCACAAATCAACACTCTTTTTGTGAAACAAGGCACTACCTTAGACAGAAACCTTGGTCCTGATTTTAAAATCCCAGCAGCATCTCTAGGCAGCTTTGTAACCCTATCCATGCTGCTCTCAGTGCCAATGTATGACCGGTTTTTCGTACCGTTCATGCGCCAGAAAACCGGCCACCCGAGAGGAATCACATTACTTCAAAGACTTGGAATAGGATTTTCAATCCAGATCATAGCCATTGCAATTGCTTATGCAGTAGAAGTTAGAAGAATGCATGTGATAAAAGAGAATCACATTTTTGGTCCTAAAGATATTGTCCCTATGAGTATATTTTGGTTGTTACCACAATATGTTCTTATTGGTATAGCAGATGTTTTCAATGCCATTGGATTATTGGAATTCTTCTATGATCAATCTCCTGAAGACATGCAAAGTCTTGGAACAACTTTCTTCACAAGTGGAATTGGTGTTGGGAATTTCTTGAACAGTTTTTTGGTAACAATGACTGATAAGATAACAGGAAGAGGGACTAGAAAGAGTTGGATTGCTGATAACTTGAATGATTCTCACTTAGATTACTATTATGGGTTTCTTTTGATCTTGTCAAGTGTTAATTTGTTGGTGTTTTTGTGGGTTTCAAGTAGATACATTTACAAGAAGGAGTCAACAAGAATCAAAGAAGCACTTTGTGTTCAAATGGAAGGTAATTCAACTTTGGATGCATCTCTTGGCTTACAAGTATGA

Protein sequence

>Msa0369750

MEAKEDYTHDGTVDFHGKPAVPSKTGKWKACAFLVGYEAFERMAFYGVASNLVNYLTTQLHEDTVSSVRNVNTWSGSVWITPILGAYIADSYLGRFWTFTLSSLIYVLGMTLLTIAVSLKSLKPTCTNGICNKASTSQITFFYTALYTMAIGAGGTKPNISTFGADQFDDFNPHEKELKASFFNWWMFTSFLGALIATLGLVYIQENLGWGLGYGIPTAGLLLSLVIFYIGTPIYRHKVRTSKSPAKDIIRVFIVAFKNRKLQLPSNPSDLHEFQMEHCVIRGKRQVYHTPTLRFLDKAAIKEDPTTGSSRRAPMTVNQVEGAKLILGMLLIWLVTLIPSTIWAQINTLFVKQGTTLDRNLGPDFKIPAASLGSFVTLSMLLSVPMYDRFFVPFMRQKTGHPRGITLLQRLGIGFSIQIIAIAIAYAVEVRRMHVIKENHIFGPKDIVPMSIFWLLPQYVLIGIADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTMTDKITGRGTRKSWIADNLNDSHLDYYYGFLLILSSVNLLVFLWVSSRYIYKKESTRIKEALCVQMEGNSTLDASLGLQV*