Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146100 | KEH17656.1 | 77.203 | 522 | 69 | 2 | 1 | 522 | 1 | 472 | 0.0 | 819 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146100 | A0A072TKC9 | 77.203 | 522 | 69 | 2 | 1 | 522 | 1 | 472 | 0.0 | 819 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0604350 | Msa1146100 | 0.807856 | 4.121062e-50 | -8.615850e-47 |
| Msa0636170 | Msa1146100 | 0.807617 | 4.631062e-50 | -8.615850e-47 |
| Msa0729800 | Msa1146100 | 0.803705 | 3.069019e-49 | -8.615850e-47 |
| Msa0743810 | Msa1146100 | 0.809951 | 1.468176e-50 | -8.615850e-47 |
| Msa0745060 | Msa1146100 | 0.805785 | 1.128864e-49 | -8.615850e-47 |
| Msa0783160 | Msa1146100 | 0.808176 | 3.522415e-50 | -8.615850e-47 |
| Msa0811270 | Msa1146100 | 0.801977 | 6.979090e-49 | -8.615850e-47 |
| Msa0825860 | Msa1146100 | 0.803278 | 3.762040e-49 | -8.615850e-47 |
| Msa0142220 | Msa1146100 | 0.808155 | 3.558391e-50 | -8.615850e-47 |
| Msa0198340 | Msa1146100 | 0.806992 | 6.284252e-50 | -8.615850e-47 |
| Msa0227480 | Msa1146100 | 0.818246 | 2.166969e-52 | -8.615850e-47 |
| Msa0407750 | Msa1146100 | 0.800731 | 1.256167e-48 | -8.615850e-47 |
| Msa0414420 | Msa1146100 | 0.806150 | 9.461532e-50 | -8.615850e-47 |
| Msa0436780 | Msa1146100 | 0.803618 | 3.199661e-49 | -8.615850e-47 |
| Msa0450000 | Msa1146100 | 0.816157 | 6.390543e-52 | -8.615850e-47 |
| Msa0452900 | Msa1146100 | 0.823539 | 1.311741e-53 | -8.615850e-47 |
| Msa0453120 | Msa1146100 | 0.810099 | 1.364080e-50 | -8.615850e-47 |
| Msa1004390 | Msa1146100 | 0.831215 | 1.894376e-55 | -8.615850e-47 |
| Msa1016280 | Msa1146100 | 0.824936 | 6.161604e-54 | -8.615850e-47 |
| Msa1024240 | Msa1146100 | 0.807622 | 4.620988e-50 | -8.615850e-47 |
| Msa1025360 | Msa1146100 | 0.842198 | 2.994425e-58 | -8.615850e-47 |
| Msa1025370 | Msa1146100 | 0.842452 | 2.563730e-58 | -8.615850e-47 |
| Msa1028230 | Msa1146100 | 0.807287 | 5.441191e-50 | -8.615850e-47 |
| Msa1044830 | Msa1146100 | 0.844656 | 6.604316e-59 | -8.615850e-47 |
| Msa1044840 | Msa1146100 | 0.841110 | 5.797224e-58 | -8.615850e-47 |
| Msa1100980 | Msa1146100 | 0.816677 | 4.889658e-52 | -8.615850e-47 |
| Msa0267000 | Msa1146100 | 0.827267 | 1.718953e-54 | -8.615850e-47 |
| Msa0267010 | Msa1146100 | 0.835897 | 1.284034e-56 | -8.615850e-47 |
| Msa0290870 | Msa1146100 | 0.801586 | 8.398228e-49 | -8.615850e-47 |
| Msa0295770 | Msa1146100 | 0.806240 | 9.054101e-50 | -8.615850e-47 |
| Msa0342240 | Msa1146100 | 0.815986 | 6.979233e-52 | -8.615850e-47 |
| Msa1112300 | Msa1146100 | 0.844210 | 8.704391e-59 | -8.615850e-47 |
| Msa1121200 | Msa1146100 | 0.820246 | 7.592589e-53 | -8.615850e-47 |
| Msa1121480 | Msa1146100 | 0.827000 | 1.992060e-54 | -8.615850e-47 |
| Msa1121490 | Msa1146100 | 0.806662 | 7.376764e-50 | -8.615850e-47 |
| Msa1146100 | Msa1146110 | 0.847401 | 1.183764e-59 | -8.615850e-47 |
| Msa1146100 | Msa1187940 | 0.802086 | 6.628342e-49 | -8.615850e-47 |
| Msa1146100 | Msa1248310 | 0.805213 | 1.488213e-49 | -8.615850e-47 |
| Msa1146100 | Msa1248370 | 0.804769 | 1.842394e-49 | -8.615850e-47 |
| Msa1146100 | Msa1270230 | 0.813482 | 2.503051e-51 | -8.615850e-47 |
| Msa1146100 | Msa1270240 | 0.801030 | 1.091440e-48 | -8.615850e-47 |
| Msa1146100 | Msa1283330 | 0.807525 | 4.844544e-50 | -8.615850e-47 |
| Msa1146100 | Msa1284680 | 0.806411 | 8.334124e-50 | -8.615850e-47 |
| Msa1146100 | Msa1287800 | 0.801319 | 9.524306e-49 | -8.615850e-47 |
| Msa1146100 | Msa1287810 | 0.817698 | 2.880758e-52 | -8.615850e-47 |
| Msa1146100 | Msa1289430 | 0.821077 | 4.889721e-53 | -8.615850e-47 |
| Msa1146100 | Msa1340590 | 0.806042 | 9.969826e-50 | -8.615850e-47 |
| Msa1146100 | Msa1366810 | 0.807944 | 3.946672e-50 | -8.615850e-47 |
| Msa1146100 | Msa1382690 | 0.807028 | 6.172474e-50 | -8.615850e-47 |
| Msa1146100 | Msa1397580 | 0.805841 | 1.098895e-49 | -8.615850e-47 |
| Msa1146100 | Msa1415310 | 0.804154 | 2.475141e-49 | -8.615850e-47 |
| Msa1146100 | Msa1433120 | 0.807885 | 4.062779e-50 | -8.615850e-47 |
| Msa0600700 | Msa1146100 | 0.806594 | 7.627268e-50 | -8.615850e-47 |
| Msa0844500 | Msa1146100 | 0.826816 | 2.204052e-54 | -8.615850e-47 |
| Msa0845930 | Msa1146100 | 0.802727 | 4.891412e-49 | -8.615850e-47 |
| Msa0858980 | Msa1146100 | 0.828454 | 8.910841e-55 | -8.615850e-47 |
| Msa0888370 | Msa1146100 | 0.803884 | 2.816455e-49 | -8.615850e-47 |
| Msa0888420 | Msa1146100 | 0.857317 | 1.772676e-62 | -8.615850e-47 |
| Msa0914760 | Msa1146100 | 0.816228 | 6.161214e-52 | -8.615850e-47 |
| Msa0952720 | Msa1146100 | 0.808722 | 2.694052e-50 | -8.615850e-47 |
| Msa0969260 | Msa1146100 | 0.817194 | 3.742191e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146100 | MtrunA17_Chr1g0167871 | 62.338 | 539 | 172 | 4 | 3 | 541 | 208 | 715 | 0.0 | 682 |
| Msa1146100 | MtrunA17_Chr2g0304851 | 60.263 | 380 | 132 | 1 | 1 | 380 | 5 | 365 | 2.00e-176 | 502 |
| Msa1146100 | MtrunA17_Chr5g0393521 | 65.306 | 294 | 101 | 1 | 248 | 541 | 2 | 294 | 1.41e-132 | 387 |
| Msa1146100 | MtrunA17_Chr7g0231491 | 67.281 | 217 | 71 | 0 | 3 | 219 | 37 | 253 | 7.10e-106 | 317 |
| Msa1146100 | MtrunA17_Chr5g0393531 | 63.274 | 226 | 73 | 2 | 1 | 226 | 1 | 216 | 2.01e-96 | 291 |
| Msa1146100 | MtrunA17_Chr5g0417421 | 69.780 | 182 | 54 | 1 | 287 | 468 | 109 | 289 | 6.53e-88 | 273 |
| Msa1146100 | MtrunA17_Chr5g0417421 | 56.667 | 120 | 34 | 4 | 116 | 235 | 19 | 120 | 1.20e-34 | 132 |
| Msa1146100 | MtrunA17_Chr6g0462951 | 83.453 | 139 | 23 | 0 | 81 | 219 | 1 | 139 | 2.14e-80 | 248 |
| Msa1146100 | MtrunA17_Chr7g0223511 | 55.981 | 209 | 70 | 2 | 1 | 209 | 24 | 210 | 7.12e-77 | 242 |
| Msa1146100 | MtrunA17_Chr5g0420451 | 55.981 | 209 | 79 | 2 | 1 | 209 | 2 | 197 | 3.69e-76 | 239 |
| Msa1146100 | MtrunA17_Chr8g0347361 | 60.843 | 166 | 63 | 1 | 1 | 166 | 11 | 174 | 2.78e-67 | 216 |
| Msa1146100 | MtrunA17_Chr8g0372151 | 41.111 | 270 | 62 | 3 | 1 | 270 | 6 | 178 | 7.00e-56 | 186 |
| Msa1146100 | MtrunA17_Chr4g0044661 | 28.336 | 547 | 304 | 14 | 1 | 534 | 7 | 478 | 2.59e-54 | 191 |
| Msa1146100 | MtrunA17_Chr6g0481111 | 60.584 | 137 | 53 | 1 | 1 | 136 | 1 | 137 | 7.05e-53 | 176 |
| Msa1146100 | MtrunA17_Chr4g0026601 | 53.691 | 149 | 64 | 1 | 26 | 174 | 39 | 182 | 5.96e-49 | 167 |
| Msa1146100 | MtrunA17_Chr1g0172341 | 66.071 | 112 | 38 | 0 | 1 | 112 | 3 | 114 | 2.94e-48 | 163 |
| Msa1146100 | MtrunA17_Chr5g0393801 | 67.593 | 108 | 35 | 0 | 1 | 108 | 1 | 108 | 1.27e-44 | 153 |
| Msa1146100 | MtrunA17_Chr7g0234461 | 70.833 | 96 | 28 | 0 | 40 | 135 | 1 | 96 | 1.49e-42 | 147 |
| Msa1146100 | MtrunA17_Chr1g0171051 | 30.833 | 240 | 129 | 6 | 1 | 206 | 49 | 285 | 1.09e-27 | 114 |
| Msa1146100 | MtrunA17_Chr7g0231501 | 63.514 | 74 | 27 | 0 | 209 | 282 | 6 | 79 | 9.64e-27 | 103 |
| Msa1146100 | MtrunA17_Chr5g0421991 | 38.519 | 135 | 83 | 0 | 255 | 389 | 6 | 140 | 1.26e-25 | 106 |
| Msa1146100 | MtrunA17_Chr1g0148611 | 34.545 | 165 | 103 | 4 | 47 | 209 | 2 | 163 | 1.38e-22 | 94.7 |
| Msa1146100 | MtrunA17_Chr2g0278111 | 24.232 | 293 | 211 | 6 | 1 | 288 | 1 | 287 | 9.86e-21 | 93.2 |
| Msa1146100 | MtrunA17_Chr5g0411141 | 24.232 | 293 | 211 | 6 | 1 | 288 | 2 | 288 | 1.07e-20 | 93.2 |
| Msa1146100 | MtrunA17_Chr8g0363071 | 33.121 | 157 | 101 | 3 | 50 | 203 | 3 | 158 | 1.15e-20 | 89.0 |
| Msa1146100 | MtrunA17_Chr5g0423441 | 25.726 | 241 | 172 | 4 | 1 | 236 | 1 | 239 | 5.11e-20 | 89.7 |
| Msa1146100 | MtrunA17_Chr6g0453011 | 48.837 | 86 | 22 | 1 | 1 | 64 | 33 | 118 | 2.88e-19 | 84.0 |
| Msa1146100 | MtrunA17_Chr1g0206481 | 26.335 | 281 | 188 | 8 | 19 | 290 | 19 | 289 | 5.39e-18 | 84.7 |
| Msa1146100 | MtrunA17_Chr2g0280031 | 27.586 | 203 | 137 | 4 | 40 | 233 | 25 | 226 | 1.15e-17 | 83.2 |
| Msa1146100 | MtrunA17_Chr5g0426561 | 62.500 | 48 | 18 | 0 | 1 | 48 | 1 | 48 | 9.55e-16 | 71.6 |
| Msa1146100 | MtrunA17_Chr5g0421841 | 25.822 | 213 | 147 | 5 | 1 | 206 | 1 | 209 | 1.71e-15 | 75.5 |
| Msa1146100 | MtrunA17_Chr6g0469931 | 28.139 | 231 | 152 | 9 | 16 | 239 | 18 | 241 | 2.70e-14 | 75.9 |
| Msa1146100 | MtrunA17_Chr6g0464321 | 65.116 | 43 | 15 | 0 | 1 | 43 | 1 | 43 | 9.40e-14 | 67.8 |
| Msa1146100 | MtrunA17_Chr3g0093401 | 22.857 | 245 | 174 | 7 | 1 | 240 | 1 | 235 | 8.83e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146100 | AT1G52950.1 | 23.092 | 524 | 350 | 18 | 4 | 506 | 6 | 497 | 8.48e-24 | 105 |
| Msa1146100 | AT2G05642.1 | 21.494 | 549 | 336 | 17 | 8 | 513 | 8 | 504 | 5.72e-14 | 75.1 |
Find 122 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTGTACACAAACCTTTAA+TGG | 0.187381 | 7_4:+23236000 | Msa1146100:CDS |
| CTATACTTTAAGCAACTTTC+TGG | 0.189262 | 7_4:+23235031 | Msa1146100:CDS |
| TTTATGCAGCCTGGGCTATC+TGG | 0.257870 | 7_4:+23237126 | Msa1146100:intron |
| CCTCCATACACATGTGATTC+TGG | 0.293596 | 7_4:+23236321 | Msa1146100:CDS |
| CGGCTCTGTGGTTAGCTATA+AGG | 0.305993 | 7_4:+23236750 | Msa1146100:CDS |
| TACATTTAGTTTGCCTAAAC+AGG | 0.315277 | 7_4:+23235951 | Msa1146100:intron |
| TGAACAATTACTGGTGCATT+AGG | 0.317116 | 7_4:-23236811 | None:intergenic |
| TACCTGTTAACTGTACTCTT+TGG | 0.323139 | 7_4:+23235539 | Msa1146100:CDS |
| TTAACGAGAAGAAGGACTTT+TGG | 0.326384 | 7_4:+23234527 | Msa1146100:CDS |
| AACATAAGTTCAAGCTAATC+TGG | 0.331060 | 7_4:+23235087 | Msa1146100:CDS |
| TTTGATGAGCTTGACTCTCT+TGG | 0.332068 | 7_4:-23237328 | None:intergenic |
| ATCAAACTGAGATCCATTAA+AGG | 0.339441 | 7_4:-23236013 | None:intergenic |
| GGTTTGCTGCAAGTGTAATA+AGG | 0.340796 | 7_4:+23236281 | Msa1146100:CDS |
| GACTCTAGCTGGTCCTGTTT+AGG | 0.348441 | 7_4:-23235964 | None:intergenic |
| CGTTGTTGTTTAGATGTCAT+TGG | 0.350270 | 7_4:+23235311 | Msa1146100:intron |
| CAGGTTTGGCTGGTATTACT+TGG | 0.363690 | 7_4:+23236260 | Msa1146100:CDS |
| ACCTGTTAACTGTACTCTTT+GGG | 0.368181 | 7_4:+23235540 | Msa1146100:CDS |
| CTGGCTTAGCAGGAGTGATT+TGG | 0.371032 | 7_4:-23237239 | None:intergenic |
| AAAAGCTTCAAGTTAACTTC+TGG | 0.381953 | 7_4:+23235381 | Msa1146100:CDS |
| AAAGTTAACTCAACCAGGTT+TGG | 0.385376 | 7_4:+23236246 | Msa1146100:CDS |
| ACTTCTGGCTAAAAGACTTA+AGG | 0.392190 | 7_4:+23235396 | Msa1146100:CDS |
| AGTGCTCTTGGTGTCTTCAT+AGG | 0.394781 | 7_4:-23236475 | None:intergenic |
| GGTGAATGACTTCGTCTTCA+AGG | 0.397058 | 7_4:+23235058 | Msa1146100:CDS |
| TCCCAAAGAGTACAGTTAAC+AGG | 0.402016 | 7_4:-23235541 | None:intergenic |
| ATTACCAAGGATTTCATCTT+CGG | 0.407439 | 7_4:-23236037 | None:intergenic |
| TATTTCAGCATCACAACAAT+AGG | 0.410666 | 7_4:-23235616 | None:intergenic |
| TTCAGGCTGGGATCACTAAT+AGG | 0.413636 | 7_4:+23236647 | Msa1146100:intron |
| GCTGAACTTGATAAACTTTG+CGG | 0.417974 | 7_4:-23235572 | None:intergenic |
| CAGAAAGTTGCTTAAAGTAT+AGG | 0.421723 | 7_4:-23235030 | None:intergenic |
| GGCAAAGCAGGAACAGATAC+TGG | 0.422126 | 7_4:-23237258 | None:intergenic |
| GGAACAGATACTGGCTTAGC+AGG | 0.425231 | 7_4:-23237249 | None:intergenic |
| CGAGATTATCCAGCTTGATC+AGG | 0.426725 | 7_4:+23236080 | Msa1146100:CDS |
| CTGAAATAGCTGCTGGAAGA+TGG | 0.440640 | 7_4:+23235183 | Msa1146100:CDS |
| AGCTTTGAAGTTCAAACCCT+TGG | 0.444243 | 7_4:+23235160 | Msa1146100:CDS |
| GATGACTTCTGTTTGATGCC+TGG | 0.445293 | 7_4:-23237213 | None:intergenic |
| GAATTTCTGCTGCTCAGCTT+AGG | 0.446871 | 7_4:+23236535 | Msa1146100:CDS |
| CCGTGAGGTCTCTCAATTGT+TGG | 0.461588 | 7_4:+23236512 | Msa1146100:CDS |
| GCTGACTTTGTGACTCTAGC+TGG | 0.465294 | 7_4:-23235975 | None:intergenic |
| TGGAAATAACCTGATCAAGC+TGG | 0.469236 | 7_4:-23236089 | None:intergenic |
| TTTAAGCAACTTTCTGGTCC+AGG | 0.471716 | 7_4:+23235037 | Msa1146100:CDS |
| CTGAGTGTTACTAACACATA+TGG | 0.471788 | 7_4:+23235763 | Msa1146100:CDS |
| CGTGAGGTCTCTCAATTGTT+GGG | 0.473546 | 7_4:+23236513 | Msa1146100:CDS |
| CCATCTGTCCACCACCTTCA+CGG | 0.476943 | 7_4:-23234557 | None:intergenic |
| TTAACTCAACCAGGTTTGGC+TGG | 0.484831 | 7_4:+23236250 | Msa1146100:CDS |
| CCCTTGGCTGAAATAGCTGC+TGG | 0.486703 | 7_4:+23235176 | Msa1146100:CDS |
| TTGAACTTCAAAGCTACATC+AGG | 0.486715 | 7_4:-23235152 | None:intergenic |
| TGTCCAGAATCACATGTGTA+TGG | 0.486770 | 7_4:-23236324 | None:intergenic |
| CCACATGACAAAAGTGCTCT+TGG | 0.488062 | 7_4:-23236487 | None:intergenic |
| TACCATTGGTCAGAAATCAA+TGG | 0.490426 | 7_4:+23236693 | Msa1146100:CDS |
| GGAACGTTGTTAAGGATGGC+AGG | 0.490647 | 7_4:+23234578 | Msa1146100:CDS |
| TGGCAGGGAGCACTCTGAAA+TGG | 0.492223 | 7_4:+23234594 | Msa1146100:CDS |
| ATCATCAAACGCATCTGGTA+GGG | 0.493945 | 7_4:-23237280 | None:intergenic |
| GTAGTAGATTTCTCACTCAT+AGG | 0.494093 | 7_4:-23237189 | None:intergenic |
| TCTCACTCATAGGTGTAAGT+TGG | 0.496358 | 7_4:-23237179 | None:intergenic |
| GTGATATCATCAAACGCATC+TGG | 0.497451 | 7_4:-23237285 | None:intergenic |
| GGACAGATGGAACGTTGTTA+AGG | 0.499333 | 7_4:+23234570 | Msa1146100:CDS |
| TATTGAGATTTGTAACCAGT+TGG | 0.503410 | 7_4:-23234981 | None:intergenic |
| ACACTGAGACAGAAATTGTC+AGG | 0.505666 | 7_4:+23236349 | Msa1146100:CDS |
| GTATGGAGGTTTATCACCCT+TGG | 0.508021 | 7_4:-23236307 | None:intergenic |
| TTACAAATCTCAATATGAAA+AGG | 0.510883 | 7_4:+23234989 | Msa1146100:CDS |
| TCCAGCAGCTATTTCAGCCA+AGG | 0.512978 | 7_4:-23235177 | None:intergenic |
| GATACCGAAGATGAAATCCT+TGG | 0.514606 | 7_4:+23236033 | Msa1146100:CDS |
| AACCATTGATTTCTGACCAA+TGG | 0.514643 | 7_4:-23236695 | None:intergenic |
| TGCTGATCTTAACGAGAAGA+AGG | 0.516792 | 7_4:+23234519 | Msa1146100:CDS |
| GCATCTGGTAGGGGCAAAGC+AGG | 0.520938 | 7_4:-23237270 | None:intergenic |
| CCAGCAGCTATTTCAGCCAA+GGG | 0.522366 | 7_4:-23235176 | None:intergenic |
| TGATGATAGTACCATGTCCT+TGG | 0.528773 | 7_4:+23236996 | Msa1146100:CDS |
| TGGCAACCAAGGTGGAAGAC+CGG | 0.536803 | 7_4:+23236730 | Msa1146100:CDS |
| CTGATCAAGCTGGATAATCT+CGG | 0.537869 | 7_4:-23236079 | None:intergenic |
| AGATCAGCAATGAAAGAGAA+AGG | 0.547010 | 7_4:-23234505 | None:intergenic |
| GTTAAAGAGAAGTTATCAGA+AGG | 0.551820 | 7_4:-23236973 | None:intergenic |
| CAAGTAATACCAGCCAAACC+TGG | 0.552881 | 7_4:-23236259 | None:intergenic |
| GAAGCTTGCCGTGAAGGTGG+TGG | 0.553260 | 7_4:+23234549 | Msa1146100:CDS |
| TAGCTTGAACTTATGTTCAG+AGG | 0.557829 | 7_4:-23235081 | None:intergenic |
| CAAGTTCAGCAATGAAAGGA+AGG | 0.558140 | 7_4:+23235585 | Msa1146100:CDS |
| TCATCAAACGCATCTGGTAG+GGG | 0.558821 | 7_4:-23237279 | None:intergenic |
| CCCACATTGATTGATACCAT+TGG | 0.562870 | 7_4:+23236679 | Msa1146100:CDS |
| AAGTTCAAGCTAATCTGGAC+TGG | 0.564646 | 7_4:+23235092 | Msa1146100:CDS |
| AGCAATGAAAGGAAGGAAGC+TGG | 0.568128 | 7_4:+23235592 | Msa1146100:CDS |
| GCTTAGGCTGAACATGATTG+AGG | 0.568824 | 7_4:+23236551 | Msa1146100:CDS |
| TATCATCAAACGCATCTGGT+AGG | 0.570013 | 7_4:-23237281 | None:intergenic |
| CAAGTGTAATAAGGTAGCCA+AGG | 0.570373 | 7_4:+23236290 | Msa1146100:CDS |
| ACAACCTCAGTGGATTCAGC+AGG | 0.570374 | 7_4:-23236943 | None:intergenic |
| ATTGGATATGTACATGAGGT+TGG | 0.573698 | 7_4:+23235329 | Msa1146100:CDS |
| TTATCAAGTTCAGCAATGAA+AGG | 0.575347 | 7_4:+23235581 | Msa1146100:CDS |
| TCAATATGAAAAGGTCATTG+AGG | 0.578592 | 7_4:+23234998 | Msa1146100:CDS |
| TTCAAGCTAATCTGGACTGG+TGG | 0.579245 | 7_4:+23235095 | Msa1146100:CDS |
| AGCTGGATAATCTCGGACAA+AGG | 0.579584 | 7_4:-23236072 | None:intergenic |
| GCATTATAAGATTATTACCA+AGG | 0.583694 | 7_4:-23236050 | None:intergenic |
| CCGTGAAGGTGGTGGACAGA+TGG | 0.584316 | 7_4:+23234557 | Msa1146100:CDS |
| ACAGAGCCGGTCTTCCACCT+TGG | 0.587561 | 7_4:-23236736 | None:intergenic |
| TTAAGGTGAAATGGCAACCA+AGG | 0.588494 | 7_4:+23236719 | Msa1146100:CDS |
| AGATGGAACGTTGTTAAGGA+TGG | 0.589873 | 7_4:+23234574 | Msa1146100:CDS |
| TATGCAAAAGTCAAGGAGGA+AGG | 0.599228 | 7_4:+23235637 | Msa1146100:CDS |
| TGTTAACTGTACTCTTTGGG+AGG | 0.604041 | 7_4:+23235543 | Msa1146100:CDS |
| GCTGAAATATGCAAAAGTCA+AGG | 0.605131 | 7_4:+23235630 | Msa1146100:CDS |
| GGTTATTGTCAAATGACTGA+GGG | 0.611020 | 7_4:+23235350 | Msa1146100:CDS |
| ACCAATGGTATCAATCAATG+TGG | 0.614718 | 7_4:-23236680 | None:intergenic |
| TCAACGGTGCCAGATAGCCC+AGG | 0.618216 | 7_4:-23237135 | None:intergenic |
| TTGGAAGCTTGCCGTGAAGG+TGG | 0.620796 | 7_4:+23234546 | Msa1146100:CDS |
| CGTTTCAACATCATTCTCAA+CGG | 0.621298 | 7_4:-23237151 | None:intergenic |
| TGAAGACGAAGTCATTCACC+TGG | 0.622637 | 7_4:-23235055 | None:intergenic |
| CTTATAGCTAACCACAGAGC+CGG | 0.626960 | 7_4:-23236749 | None:intergenic |
| AATGGTCATTGTTGATGCAA+AGG | 0.627991 | 7_4:+23234612 | Msa1146100:CDS |
| AGGTGAAATGGCAACCAAGG+TGG | 0.634130 | 7_4:+23236722 | Msa1146100:CDS |
| GAACGTTGTTAAGGATGGCA+GGG | 0.634987 | 7_4:+23234579 | Msa1146100:CDS |
| TGGTTATTGTCAAATGACTG+AGG | 0.636518 | 7_4:+23235349 | Msa1146100:CDS |
| AGGTTTGTCAACAACCTCAG+TGG | 0.637339 | 7_4:-23236953 | None:intergenic |
| ATGTGTTAGTAACACTCAGT+GGG | 0.637937 | 7_4:-23235759 | None:intergenic |
| CCAATGGTATCAATCAATGT+GGG | 0.643062 | 7_4:-23236679 | None:intergenic |
| AGTGAGAAATCTACTACACC+AGG | 0.644739 | 7_4:+23237195 | Msa1146100:CDS |
| CCAGAATCACATGTGTATGG+AGG | 0.648886 | 7_4:-23236321 | None:intergenic |
| AATCTGGACTGGTGGAACAA+CGG | 0.653566 | 7_4:+23235103 | Msa1146100:CDS |
| AAGTGTAATAAGGTAGCCAA+GGG | 0.663723 | 7_4:+23236291 | Msa1146100:CDS |
| TATTAAACTTACCAAGGACA+TGG | 0.665829 | 7_4:-23237007 | None:intergenic |
| GAAATATGCAAAAGTCAAGG+AGG | 0.676181 | 7_4:+23235633 | Msa1146100:CDS |
| CCAACAATTGAGAGACCTCA+CGG | 0.676482 | 7_4:-23236512 | None:intergenic |
| TCTGTGGTTAGCTATAAGGA+AGG | 0.687276 | 7_4:+23236754 | Msa1146100:CDS |
| TTTGCCTGCTGAATCCACTG+AGG | 0.688111 | 7_4:+23236939 | Msa1146100:CDS |
| TATGTGTTAGTAACACTCAG+TGG | 0.690672 | 7_4:-23235760 | None:intergenic |
| AAGGTGGAAGACCGGCTCTG+TGG | 0.691285 | 7_4:+23236738 | Msa1146100:CDS |
| TGTCATTGGATATGTACATG+AGG | 0.717102 | 7_4:+23235325 | Msa1146100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAATTATTTTATATTA+TGG | + | chr7_4:23236384-23236403 | Msa1146100:intron | 0.0% |
| !!! | TAATTATACTAATTTGAAAT+AGG | - | chr7_4:23237078-23237097 | None:intergenic | 10.0% |
| !!! | AAAGATATGATAAATGTTTT+TGG | - | chr7_4:23234657-23234676 | None:intergenic | 15.0% |
| !! | ATATACCATGTAAAAATATA+TGG | - | chr7_4:23234698-23234717 | None:intergenic | 15.0% |
| !!! | TTTCTATTTTGGTATAATAT+AGG | - | chr7_4:23235270-23235289 | None:intergenic | 15.0% |
| !! | AAATCAAAAAATTCAAAGAA+AGG | + | chr7_4:23235821-23235840 | Msa1146100:CDS | 15.0% |
| !! | TAAAGTTAAAAATGAGTAAA+AGG | - | chr7_4:23235924-23235943 | None:intergenic | 15.0% |
| !! | AATTAAATACATGTTCATTA+AGG | + | chr7_4:23236430-23236449 | Msa1146100:intron | 15.0% |
| !! | TTACAAATCTCAATATGAAA+AGG | + | chr7_4:23234989-23235008 | Msa1146100:CDS | 20.0% |
| !! | TAATATATCCAATTTGACAT+TGG | + | chr7_4:23237025-23237044 | Msa1146100:intron | 20.0% |
| !!! | GCTTTCCATATATTTTTACA+TGG | + | chr7_4:23234690-23234709 | Msa1146100:intron | 25.0% |
| ! | GTCATTATAAATCTGACAAA+AGG | - | chr7_4:23234838-23234857 | None:intergenic | 25.0% |
| !! | GTTGTTACATAATTTTTGCA+TGG | + | chr7_4:23234863-23234882 | Msa1146100:intron | 25.0% |
| ! | CATTGTGAATGAAATACTTA+CGG | - | chr7_4:23235226-23235245 | None:intergenic | 25.0% |
| !!! | CAATGTGAATGTTTCTATTT+TGG | - | chr7_4:23235281-23235300 | None:intergenic | 25.0% |
| !!! | AAGTTTTGTTGTTTGAGATA+AGG | + | chr7_4:23235845-23235864 | Msa1146100:intron | 25.0% |
| ! | GCATTATAAGATTATTACCA+AGG | - | chr7_4:23236053-23236072 | None:intergenic | 25.0% |
| !! | AGGTTATTTCCAATTCAATA+TGG | + | chr7_4:23236100-23236119 | Msa1146100:intron | 25.0% |
| ! | TATAGAAAGCCATATTGAAT+TGG | - | chr7_4:23236112-23236131 | None:intergenic | 25.0% |
| ! | AACCTCATATTATCTTTACT+TGG | + | chr7_4:23236150-23236169 | Msa1146100:intron | 25.0% |
| ! | ATCCAAGTAAAGATAATATG+AGG | - | chr7_4:23236155-23236174 | None:intergenic | 25.0% |
| ! | ACGTAATCTACAAAATACAA+AGG | - | chr7_4:23236200-23236219 | None:intergenic | 25.0% |
| !! | TCAGAAATCAATGGTTTTTA+AGG | + | chr7_4:23236702-23236721 | Msa1146100:CDS | 25.0% |
| ! | AGTGATAATTGAACAATTAC+TGG | - | chr7_4:23236823-23236842 | None:intergenic | 25.0% |
| ! | GTATGACTAACATGTTATAT+TGG | + | chr7_4:23236875-23236894 | Msa1146100:intron | 25.0% |
| ! | TGGATATATTAAACTTACCA+AGG | - | chr7_4:23237016-23237035 | None:intergenic | 25.0% |
| AGCTTGAAGTTATGACTATT+TGG | - | chr7_4:23234908-23234927 | None:intergenic | 30.0% | |
| AAAAAACCAGGTTCAACTTA+TGG | - | chr7_4:23234933-23234952 | None:intergenic | 30.0% | |
| !!! | ATTCAAGTTTTGATTCCAAC+TGG | + | chr7_4:23234966-23234985 | Msa1146100:CDS | 30.0% |
| TATTGAGATTTGTAACCAGT+TGG | - | chr7_4:23234984-23235003 | None:intergenic | 30.0% | |
| TCAATATGAAAAGGTCATTG+AGG | + | chr7_4:23234998-23235017 | Msa1146100:CDS | 30.0% | |
| CAGAAAGTTGCTTAAAGTAT+AGG | - | chr7_4:23235033-23235052 | None:intergenic | 30.0% | |
| CTATACTTTAAGCAACTTTC+TGG | + | chr7_4:23235031-23235050 | Msa1146100:CDS | 30.0% | |
| AACATAAGTTCAAGCTAATC+TGG | + | chr7_4:23235087-23235106 | Msa1146100:CDS | 30.0% | |
| ! | AAAAGCTTCAAGTTAACTTC+TGG | + | chr7_4:23235381-23235400 | Msa1146100:CDS | 30.0% |
| TACGAAAAACAGTGTTTCAA+TGG | + | chr7_4:23235419-23235438 | Msa1146100:intron | 30.0% | |
| TTATCAAGTTCAGCAATGAA+AGG | + | chr7_4:23235581-23235600 | Msa1146100:CDS | 30.0% | |
| TATTTCAGCATCACAACAAT+AGG | - | chr7_4:23235619-23235638 | None:intergenic | 30.0% | |
| ! | ATGTCACTTCAAATGTTGTT+AGG | + | chr7_4:23235730-23235749 | Msa1146100:intron | 30.0% |
| ! | TGTCACTTCAAATGTTGTTA+GGG | + | chr7_4:23235731-23235750 | Msa1146100:intron | 30.0% |
| !! | TTGTTGTTTGAGATAAGGTT+AGG | + | chr7_4:23235850-23235869 | Msa1146100:intron | 30.0% |
| !! | TACATTTAGTTTGCCTAAAC+AGG | + | chr7_4:23235951-23235970 | Msa1146100:intron | 30.0% |
| ATGTGTACACAAACCTTTAA+TGG | + | chr7_4:23236000-23236019 | Msa1146100:CDS | 30.0% | |
| ATCAAACTGAGATCCATTAA+AGG | - | chr7_4:23236016-23236035 | None:intergenic | 30.0% | |
| ATTACCAAGGATTTCATCTT+CGG | - | chr7_4:23236040-23236059 | None:intergenic | 30.0% | |
| TTGAAAAAGTTAACTCAACC+AGG | + | chr7_4:23236241-23236260 | Msa1146100:CDS | 30.0% | |
| TCATGTCTGTACAACAATAT+TGG | - | chr7_4:23236602-23236621 | None:intergenic | 30.0% | |
| AATATTGTTGTACAGACATG+AGG | + | chr7_4:23236601-23236620 | Msa1146100:intron | 30.0% | |
| CTCATATGATACAACATTTC+AGG | + | chr7_4:23236630-23236649 | Msa1146100:intron | 30.0% | |
| !!! | CAATGGTTTTTAAGGTGAAA+TGG | + | chr7_4:23236710-23236729 | Msa1146100:CDS | 30.0% |
| GTTAAAGAGAAGTTATCAGA+AGG | - | chr7_4:23236976-23236995 | None:intergenic | 30.0% | |
| TATTAAACTTACCAAGGACA+TGG | - | chr7_4:23237010-23237029 | None:intergenic | 30.0% | |
| TAATCAAGCCAATGTCAAAT+TGG | - | chr7_4:23237036-23237055 | None:intergenic | 30.0% | |
| AGATCAGCAATGAAAGAGAA+AGG | - | chr7_4:23234508-23234527 | None:intergenic | 35.0% | |
| ! | TTAACGAGAAGAAGGACTTT+TGG | + | chr7_4:23234527-23234546 | Msa1146100:CDS | 35.0% |
| AATGGTCATTGTTGATGCAA+AGG | + | chr7_4:23234612-23234631 | Msa1146100:CDS | 35.0% | |
| AGCTTTCAGTTGTGAATCTT+TGG | - | chr7_4:23234735-23234754 | None:intergenic | 35.0% | |
| !!! | AGTTGAACCTGGTTTTTTTC+AGG | + | chr7_4:23234935-23234954 | Msa1146100:intron | 35.0% |
| !!! | GTTGAACCTGGTTTTTTTCA+GGG | + | chr7_4:23234936-23234955 | Msa1146100:intron | 35.0% |
| TAGCTTGAACTTATGTTCAG+AGG | - | chr7_4:23235084-23235103 | None:intergenic | 35.0% | |
| TTGAACTTCAAAGCTACATC+AGG | - | chr7_4:23235155-23235174 | None:intergenic | 35.0% | |
| !! | CGTTGTTGTTTAGATGTCAT+TGG | + | chr7_4:23235311-23235330 | Msa1146100:intron | 35.0% |
| TGTCATTGGATATGTACATG+AGG | + | chr7_4:23235325-23235344 | Msa1146100:CDS | 35.0% | |
| ATTGGATATGTACATGAGGT+TGG | + | chr7_4:23235329-23235348 | Msa1146100:CDS | 35.0% | |
| TGGTTATTGTCAAATGACTG+AGG | + | chr7_4:23235349-23235368 | Msa1146100:CDS | 35.0% | |
| GGTTATTGTCAAATGACTGA+GGG | + | chr7_4:23235350-23235369 | Msa1146100:CDS | 35.0% | |
| ! | ACTTCTGGCTAAAAGACTTA+AGG | + | chr7_4:23235396-23235415 | Msa1146100:CDS | 35.0% |
| TACCTGTTAACTGTACTCTT+TGG | + | chr7_4:23235539-23235558 | Msa1146100:CDS | 35.0% | |
| ACCTGTTAACTGTACTCTTT+GGG | + | chr7_4:23235540-23235559 | Msa1146100:CDS | 35.0% | |
| GCTGAACTTGATAAACTTTG+CGG | - | chr7_4:23235575-23235594 | None:intergenic | 35.0% | |
| GCTGAAATATGCAAAAGTCA+AGG | + | chr7_4:23235630-23235649 | Msa1146100:CDS | 35.0% | |
| GAAATATGCAAAAGTCAAGG+AGG | + | chr7_4:23235633-23235652 | Msa1146100:CDS | 35.0% | |
| ATGTGTTAGTAACACTCAGT+GGG | - | chr7_4:23235762-23235781 | None:intergenic | 35.0% | |
| TATGTGTTAGTAACACTCAG+TGG | - | chr7_4:23235763-23235782 | None:intergenic | 35.0% | |
| ! | CTGAGTGTTACTAACACATA+TGG | + | chr7_4:23235763-23235782 | Msa1146100:CDS | 35.0% |
| AGCCATTACTGTAATAGCTT+TGG | + | chr7_4:23235897-23235916 | Msa1146100:intron | 35.0% | |
| GTCCAAAGCTATTACAGTAA+TGG | - | chr7_4:23235902-23235921 | None:intergenic | 35.0% | |
| AAAGTTAACTCAACCAGGTT+TGG | + | chr7_4:23236246-23236265 | Msa1146100:CDS | 35.0% | |
| AAGTGTAATAAGGTAGCCAA+GGG | + | chr7_4:23236291-23236310 | Msa1146100:CDS | 35.0% | |
| TGTACAACAATATTGGTCAC+AGG | - | chr7_4:23236595-23236614 | None:intergenic | 35.0% | |
| TATGATACAACATTTCAGGC+TGG | + | chr7_4:23236634-23236653 | Msa1146100:intron | 35.0% | |
| ATGATACAACATTTCAGGCT+GGG | + | chr7_4:23236635-23236654 | Msa1146100:intron | 35.0% | |
| CCAATGGTATCAATCAATGT+GGG | - | chr7_4:23236682-23236701 | None:intergenic | 35.0% | |
| ACCAATGGTATCAATCAATG+TGG | - | chr7_4:23236683-23236702 | None:intergenic | 35.0% | |
| TACCATTGGTCAGAAATCAA+TGG | + | chr7_4:23236693-23236712 | Msa1146100:CDS | 35.0% | |
| !! | AACCATTGATTTCTGACCAA+TGG | - | chr7_4:23236698-23236717 | None:intergenic | 35.0% |
| TGAACAATTACTGGTGCATT+AGG | - | chr7_4:23236814-23236833 | None:intergenic | 35.0% | |
| GTTTGTAGTGATTACACAGA+TGG | - | chr7_4:23236907-23236926 | None:intergenic | 35.0% | |
| AGGCTGCATAAAATAGACAA+AGG | - | chr7_4:23237118-23237137 | None:intergenic | 35.0% | |
| ! | TTTGTCTATTTTATGCAGCC+TGG | + | chr7_4:23237117-23237136 | Msa1146100:intron | 35.0% |
| ! | TTGTCTATTTTATGCAGCCT+GGG | + | chr7_4:23237118-23237137 | Msa1146100:intron | 35.0% |
| CGTTTCAACATCATTCTCAA+CGG | - | chr7_4:23237154-23237173 | None:intergenic | 35.0% | |
| GTAGTAGATTTCTCACTCAT+AGG | - | chr7_4:23237192-23237211 | None:intergenic | 35.0% | |
| ! | TGGATGATGAATGTTTTGCA+GGG | - | chr7_4:23237311-23237330 | None:intergenic | 35.0% |
| ! | TTGGATGATGAATGTTTTGC+AGG | - | chr7_4:23237312-23237331 | None:intergenic | 35.0% |
| TGCTGATCTTAACGAGAAGA+AGG | + | chr7_4:23234519-23234538 | Msa1146100:CDS | 40.0% | |
| AGATGGAACGTTGTTAAGGA+TGG | + | chr7_4:23234574-23234593 | Msa1146100:CDS | 40.0% | |
| ! | AGCTTTCCATAAGTTGAACC+TGG | + | chr7_4:23234924-23234943 | Msa1146100:intron | 40.0% |
| TCATTGCCCTGAAAAAAACC+AGG | - | chr7_4:23234945-23234964 | None:intergenic | 40.0% | |
| ! | TTTAAGCAACTTTCTGGTCC+AGG | + | chr7_4:23235037-23235056 | Msa1146100:CDS | 40.0% |
| AAGTTCAAGCTAATCTGGAC+TGG | + | chr7_4:23235092-23235111 | Msa1146100:CDS | 40.0% | |
| !! | AGCTTTGAAGTTCAAACCCT+TGG | + | chr7_4:23235160-23235179 | Msa1146100:CDS | 40.0% |
| ! | TCCCAAAGAGTACAGTTAAC+AGG | - | chr7_4:23235544-23235563 | None:intergenic | 40.0% |
| TGTTAACTGTACTCTTTGGG+AGG | + | chr7_4:23235543-23235562 | Msa1146100:CDS | 40.0% | |
| CAAGTTCAGCAATGAAAGGA+AGG | + | chr7_4:23235585-23235604 | Msa1146100:CDS | 40.0% | |
| TATGCAAAAGTCAAGGAGGA+AGG | + | chr7_4:23235637-23235656 | Msa1146100:CDS | 40.0% | |
| GATACCGAAGATGAAATCCT+TGG | + | chr7_4:23236033-23236052 | Msa1146100:CDS | 40.0% | |
| CTGATCAAGCTGGATAATCT+CGG | - | chr7_4:23236082-23236101 | None:intergenic | 40.0% | |
| TGGAAATAACCTGATCAAGC+TGG | - | chr7_4:23236092-23236111 | None:intergenic | 40.0% | |
| !! | GGTTTGCTGCAAGTGTAATA+AGG | + | chr7_4:23236281-23236300 | Msa1146100:CDS | 40.0% |
| CAAGTGTAATAAGGTAGCCA+AGG | + | chr7_4:23236290-23236309 | Msa1146100:CDS | 40.0% | |
| TGTCCAGAATCACATGTGTA+TGG | - | chr7_4:23236327-23236346 | None:intergenic | 40.0% | |
| ACACTGAGACAGAAATTGTC+AGG | + | chr7_4:23236349-23236368 | Msa1146100:CDS | 40.0% | |
| !!! | CAAGAGCACTTTTGTCATGT+GGG | + | chr7_4:23236488-23236507 | Msa1146100:CDS | 40.0% |
| ! | CCCACATTGATTGATACCAT+TGG | + | chr7_4:23236679-23236698 | Msa1146100:CDS | 40.0% |
| TTAAGGTGAAATGGCAACCA+AGG | + | chr7_4:23236719-23236738 | Msa1146100:CDS | 40.0% | |
| ! | TCTGTGGTTAGCTATAAGGA+AGG | + | chr7_4:23236754-23236773 | Msa1146100:CDS | 40.0% |
| TGTGTAATCACTACAAACGC+AGG | + | chr7_4:23236909-23236928 | Msa1146100:intron | 40.0% | |
| TGATGATAGTACCATGTCCT+TGG | + | chr7_4:23236996-23237015 | Msa1146100:CDS | 40.0% | |
| TCTCACTCATAGGTGTAAGT+TGG | - | chr7_4:23237182-23237201 | None:intergenic | 40.0% | |
| AGTGAGAAATCTACTACACC+AGG | + | chr7_4:23237195-23237214 | Msa1146100:CDS | 40.0% | |
| ATCATCAAACGCATCTGGTA+GGG | - | chr7_4:23237283-23237302 | None:intergenic | 40.0% | |
| TATCATCAAACGCATCTGGT+AGG | - | chr7_4:23237284-23237303 | None:intergenic | 40.0% | |
| GTGATATCATCAAACGCATC+TGG | - | chr7_4:23237288-23237307 | None:intergenic | 40.0% | |
| ! | GGATGATGAATGTTTTGCAG+GGG | - | chr7_4:23237310-23237329 | None:intergenic | 40.0% |
| TTTGATGAGCTTGACTCTCT+TGG | - | chr7_4:23237331-23237350 | None:intergenic | 40.0% | |
| GGACAGATGGAACGTTGTTA+AGG | + | chr7_4:23234570-23234589 | Msa1146100:CDS | 45.0% | |
| GAACGTTGTTAAGGATGGCA+GGG | + | chr7_4:23234579-23234598 | Msa1146100:CDS | 45.0% | |
| TGAAGACGAAGTCATTCACC+TGG | - | chr7_4:23235058-23235077 | None:intergenic | 45.0% | |
| GGTGAATGACTTCGTCTTCA+AGG | + | chr7_4:23235058-23235077 | Msa1146100:CDS | 45.0% | |
| ! | TTCAAGCTAATCTGGACTGG+TGG | + | chr7_4:23235095-23235114 | Msa1146100:CDS | 45.0% |
| !! | AATCTGGACTGGTGGAACAA+CGG | + | chr7_4:23235103-23235122 | Msa1146100:CDS | 45.0% |
| CTGAAATAGCTGCTGGAAGA+TGG | + | chr7_4:23235183-23235202 | Msa1146100:CDS | 45.0% | |
| AGCAATGAAAGGAAGGAAGC+TGG | + | chr7_4:23235592-23235611 | Msa1146100:CDS | 45.0% | |
| GCTATGCGAAGAGGTGATAA+TGG | - | chr7_4:23235880-23235899 | None:intergenic | 45.0% | |
| ACAGTAATGGCTATGCGAAG+AGG | - | chr7_4:23235889-23235908 | None:intergenic | 45.0% | |
| AGCTGGATAATCTCGGACAA+AGG | - | chr7_4:23236075-23236094 | None:intergenic | 45.0% | |
| CGAGATTATCCAGCTTGATC+AGG | + | chr7_4:23236080-23236099 | Msa1146100:CDS | 45.0% | |
| TTAACTCAACCAGGTTTGGC+TGG | + | chr7_4:23236250-23236269 | Msa1146100:CDS | 45.0% | |
| CAAGTAATACCAGCCAAACC+TGG | - | chr7_4:23236262-23236281 | None:intergenic | 45.0% | |
| CAGGTTTGGCTGGTATTACT+TGG | + | chr7_4:23236260-23236279 | Msa1146100:CDS | 45.0% | |
| GTATGGAGGTTTATCACCCT+TGG | - | chr7_4:23236310-23236329 | None:intergenic | 45.0% | |
| CCAGAATCACATGTGTATGG+AGG | - | chr7_4:23236324-23236343 | None:intergenic | 45.0% | |
| CCTCCATACACATGTGATTC+TGG | + | chr7_4:23236321-23236340 | Msa1146100:CDS | 45.0% | |
| !! | AGTGCTCTTGGTGTCTTCAT+AGG | - | chr7_4:23236478-23236497 | None:intergenic | 45.0% |
| !! | CCACATGACAAAAGTGCTCT+TGG | - | chr7_4:23236490-23236509 | None:intergenic | 45.0% |
| !!! | CCAAGAGCACTTTTGTCATG+TGG | + | chr7_4:23236487-23236506 | Msa1146100:CDS | 45.0% |
| CCAACAATTGAGAGACCTCA+CGG | - | chr7_4:23236515-23236534 | None:intergenic | 45.0% | |
| CGTGAGGTCTCTCAATTGTT+GGG | + | chr7_4:23236513-23236532 | Msa1146100:CDS | 45.0% | |
| GAATTTCTGCTGCTCAGCTT+AGG | + | chr7_4:23236535-23236554 | Msa1146100:CDS | 45.0% | |
| GCTTAGGCTGAACATGATTG+AGG | + | chr7_4:23236551-23236570 | Msa1146100:CDS | 45.0% | |
| TTCAGGCTGGGATCACTAAT+AGG | + | chr7_4:23236647-23236666 | Msa1146100:intron | 45.0% | |
| CTTATAGCTAACCACAGAGC+CGG | - | chr7_4:23236752-23236771 | None:intergenic | 45.0% | |
| AGGTTTGTCAACAACCTCAG+TGG | - | chr7_4:23236956-23236975 | None:intergenic | 45.0% | |
| GATGACTTCTGTTTGATGCC+TGG | - | chr7_4:23237216-23237235 | None:intergenic | 45.0% | |
| TCATCAAACGCATCTGGTAG+GGG | - | chr7_4:23237282-23237301 | None:intergenic | 45.0% | |
| !! | TTTAATAATAAAAGAAAATA+TGG | - | chr7_4:23234760-23234779 | None:intergenic | 5.0% |
| !! | CTTTTGGAAGCTTGCCGTGA+AGG | + | chr7_4:23234543-23234562 | Msa1146100:CDS | 50.0% |
| GGAACGTTGTTAAGGATGGC+AGG | + | chr7_4:23234578-23234597 | Msa1146100:CDS | 50.0% | |
| ! | CCAGCAGCTATTTCAGCCAA+GGG | - | chr7_4:23235179-23235198 | None:intergenic | 50.0% |
| ! | TCCAGCAGCTATTTCAGCCA+AGG | - | chr7_4:23235180-23235199 | None:intergenic | 50.0% |
| GACTCTAGCTGGTCCTGTTT+AGG | - | chr7_4:23235967-23235986 | None:intergenic | 50.0% | |
| ! | GCTGACTTTGTGACTCTAGC+TGG | - | chr7_4:23235978-23235997 | None:intergenic | 50.0% |
| ! | TTTTGTCATGTGGGACCGTG+AGG | + | chr7_4:23236497-23236516 | Msa1146100:CDS | 50.0% |
| CCGTGAGGTCTCTCAATTGT+TGG | + | chr7_4:23236512-23236531 | Msa1146100:CDS | 50.0% | |
| AGGTGAAATGGCAACCAAGG+TGG | + | chr7_4:23236722-23236741 | Msa1146100:CDS | 50.0% | |
| ! | CGGCTCTGTGGTTAGCTATA+AGG | + | chr7_4:23236750-23236769 | Msa1146100:CDS | 50.0% |
| TTTGCCTGCTGAATCCACTG+AGG | + | chr7_4:23236939-23236958 | Msa1146100:CDS | 50.0% | |
| ! | ACAACCTCAGTGGATTCAGC+AGG | - | chr7_4:23236946-23236965 | None:intergenic | 50.0% |
| TTTATGCAGCCTGGGCTATC+TGG | + | chr7_4:23237126-23237145 | Msa1146100:intron | 50.0% | |
| CTGGCTTAGCAGGAGTGATT+TGG | - | chr7_4:23237242-23237261 | None:intergenic | 50.0% | |
| !! | GGAACAGATACTGGCTTAGC+AGG | - | chr7_4:23237252-23237271 | None:intergenic | 50.0% |
| GGCAAAGCAGGAACAGATAC+TGG | - | chr7_4:23237261-23237280 | None:intergenic | 50.0% | |
| TTGGAAGCTTGCCGTGAAGG+TGG | + | chr7_4:23234546-23234565 | Msa1146100:CDS | 55.0% | |
| CCATCTGTCCACCACCTTCA+CGG | - | chr7_4:23234560-23234579 | None:intergenic | 55.0% | |
| !! | TGGCAGGGAGCACTCTGAAA+TGG | + | chr7_4:23234594-23234613 | Msa1146100:CDS | 55.0% |
| CCCTTGGCTGAAATAGCTGC+TGG | + | chr7_4:23235176-23235195 | Msa1146100:CDS | 55.0% | |
| TGGCAACCAAGGTGGAAGAC+CGG | + | chr7_4:23236730-23236749 | Msa1146100:CDS | 55.0% | |
| GAAGCTTGCCGTGAAGGTGG+TGG | + | chr7_4:23234549-23234568 | Msa1146100:CDS | 60.0% | |
| !! | CCGTGAAGGTGGTGGACAGA+TGG | + | chr7_4:23234557-23234576 | Msa1146100:CDS | 60.0% |
| ACAGAGCCGGTCTTCCACCT+TGG | - | chr7_4:23236739-23236758 | None:intergenic | 60.0% | |
| ! | AAGGTGGAAGACCGGCTCTG+TGG | + | chr7_4:23236738-23236757 | Msa1146100:CDS | 60.0% |
| ! | TCAACGGTGCCAGATAGCCC+AGG | - | chr7_4:23237138-23237157 | None:intergenic | 60.0% |
| GCATCTGGTAGGGGCAAAGC+AGG | - | chr7_4:23237273-23237292 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 23234496 | 23237365 | 23234496 | ID=Msa1146100;Name=Msa1146100 |
| chr7_4 | mRNA | 23234496 | 23237365 | 23234496 | ID=Msa1146100-mRNA-1;Parent=Msa1146100;Name=Msa1146100-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.6|0.27|1|1|1|11|0|541 |
| chr7_4 | exon | 23234496 | 23234633 | 23234496 | ID=Msa1146100-mRNA-1:exon:5836;Parent=Msa1146100-mRNA-1 |
| chr7_4 | exon | 23234957 | 23235224 | 23234957 | ID=Msa1146100-mRNA-1:exon:5837;Parent=Msa1146100-mRNA-1 |
| chr7_4 | exon | 23235324 | 23235417 | 23235324 | ID=Msa1146100-mRNA-1:exon:5838;Parent=Msa1146100-mRNA-1 |
| chr7_4 | exon | 23235534 | 23235658 | 23235534 | ID=Msa1146100-mRNA-1:exon:5839;Parent=Msa1146100-mRNA-1 |
| chr7_4 | exon | 23235752 | 23235842 | 23235752 | ID=Msa1146100-mRNA-1:exon:5840;Parent=Msa1146100-mRNA-1 |
| chr7_4 | exon | 23235960 | 23236101 | 23235960 | ID=Msa1146100-mRNA-1:exon:5841;Parent=Msa1146100-mRNA-1 |
| chr7_4 | exon | 23236213 | 23236370 | 23236213 | ID=Msa1146100-mRNA-1:exon:5842;Parent=Msa1146100-mRNA-1 |
| chr7_4 | exon | 23236452 | 23236572 | 23236452 | ID=Msa1146100-mRNA-1:exon:5843;Parent=Msa1146100-mRNA-1 |
| chr7_4 | exon | 23236652 | 23236822 | 23236652 | ID=Msa1146100-mRNA-1:exon:5844;Parent=Msa1146100-mRNA-1 |
| chr7_4 | exon | 23236931 | 23237017 | 23236931 | ID=Msa1146100-mRNA-1:exon:5845;Parent=Msa1146100-mRNA-1 |
| chr7_4 | exon | 23237135 | 23237365 | 23237135 | ID=Msa1146100-mRNA-1:exon:5846;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23234496 | 23234633 | 23234496 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23234957 | 23235224 | 23234957 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23235324 | 23235417 | 23235324 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23235534 | 23235658 | 23235534 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23235752 | 23235842 | 23235752 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23235960 | 23236101 | 23235960 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23236213 | 23236370 | 23236213 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23236452 | 23236572 | 23236452 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23236652 | 23236822 | 23236652 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23236931 | 23237017 | 23236931 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| chr7_4 | CDS | 23237135 | 23237365 | 23237135 | ID=Msa1146100-mRNA-1:cds;Parent=Msa1146100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
