Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0914760 | XP_003616287.1 | 52.029 | 419 | 164 | 4 | 1 | 385 | 1 | 416 | 8.66e-145 | 431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002240 | Msa0914760 | 0.802444 | 5.593743e-49 | -8.615850e-47 |
| Msa0011660 | Msa0914760 | -0.812968 | 3.245585e-51 | -8.615850e-47 |
| Msa0013750 | Msa0914760 | 0.821306 | 4.332010e-53 | -8.615850e-47 |
| Msa0095970 | Msa0914760 | 0.826676 | 2.380546e-54 | -8.615850e-47 |
| Msa0102070 | Msa0914760 | 0.810796 | 9.644622e-51 | -8.615850e-47 |
| Msa0604350 | Msa0914760 | 0.807546 | 4.794204e-50 | -8.615850e-47 |
| Msa0617500 | Msa0914760 | 0.806711 | 7.202259e-50 | -8.615850e-47 |
| Msa0632740 | Msa0914760 | 0.810926 | 9.039210e-51 | -8.615850e-47 |
| Msa0636170 | Msa0914760 | 0.810314 | 1.226174e-50 | -8.615850e-47 |
| Msa0645300 | Msa0914760 | 0.820569 | 6.398723e-53 | -8.615850e-47 |
| Msa0647170 | Msa0914760 | 0.803625 | 3.188226e-49 | -8.615850e-47 |
| Msa0650630 | Msa0914760 | 0.814189 | 1.748575e-51 | -8.615850e-47 |
| Msa0700300 | Msa0914760 | 0.814121 | 1.810246e-51 | -8.615850e-47 |
| Msa0701010 | Msa0914760 | 0.823675 | 1.219267e-53 | -8.615850e-47 |
| Msa0725850 | Msa0914760 | 0.812906 | 3.349386e-51 | -8.615850e-47 |
| Msa0729800 | Msa0914760 | 0.813903 | 2.022349e-51 | -8.615850e-47 |
| Msa0731940 | Msa0914760 | 0.832580 | 8.715167e-56 | -8.615850e-47 |
| Msa0743810 | Msa0914760 | 0.837331 | 5.537133e-57 | -8.615850e-47 |
| Msa0745060 | Msa0914760 | 0.815705 | 8.061887e-52 | -8.615850e-47 |
| Msa0748970 | Msa0914760 | 0.823113 | 1.649652e-53 | -8.615850e-47 |
| Msa0750650 | Msa0914760 | 0.810634 | 1.045585e-50 | -8.615850e-47 |
| Msa0768290 | Msa0914760 | 0.822388 | 2.433251e-53 | -8.615850e-47 |
| Msa0768370 | Msa0914760 | 0.838423 | 2.900949e-57 | -8.615850e-47 |
| Msa0783160 | Msa0914760 | 0.812968 | 3.246576e-51 | -8.615850e-47 |
| Msa0784290 | Msa0914760 | 0.855811 | 4.911524e-62 | -8.615850e-47 |
| Msa0784300 | Msa0914760 | 0.848583 | 5.586970e-60 | -8.615850e-47 |
| Msa0808010 | Msa0914760 | 0.826198 | 3.093986e-54 | -8.615850e-47 |
| Msa0808020 | Msa0914760 | 0.820312 | 7.332079e-53 | -8.615850e-47 |
| Msa0810220 | Msa0914760 | 0.809017 | 2.329018e-50 | -8.615850e-47 |
| Msa0824590 | Msa0914760 | 0.828209 | 1.021021e-54 | -8.615850e-47 |
| Msa0825860 | Msa0914760 | 0.825251 | 5.189201e-54 | -8.615850e-47 |
| Msa0832340 | Msa0914760 | 0.803987 | 2.680855e-49 | -8.615850e-47 |
| Msa0833290 | Msa0914760 | 0.850705 | 1.428695e-60 | -8.615850e-47 |
| Msa0833300 | Msa0914760 | 0.840008 | 1.126375e-57 | -8.615850e-47 |
| Msa0180500 | Msa0914760 | 0.858120 | 1.024409e-62 | -8.615850e-47 |
| Msa0188460 | Msa0914760 | 0.802248 | 6.137892e-49 | -8.615850e-47 |
| Msa0198910 | Msa0914760 | 0.801287 | 9.670230e-49 | -8.615850e-47 |
| Msa0208090 | Msa0914760 | 0.800610 | 1.329214e-48 | -8.615850e-47 |
| Msa0227480 | Msa0914760 | 0.827540 | 1.478950e-54 | -8.615850e-47 |
| Msa0365500 | Msa0914760 | 0.817717 | 2.852653e-52 | -8.615850e-47 |
| Msa0384890 | Msa0914760 | 0.826470 | 2.665454e-54 | -8.615850e-47 |
| Msa0385840 | Msa0914760 | 0.804041 | 2.613594e-49 | -8.615850e-47 |
| Msa0407750 | Msa0914760 | 0.800140 | 1.657309e-48 | -8.615850e-47 |
| Msa0414410 | Msa0914760 | 0.842269 | 2.865916e-58 | -8.615850e-47 |
| Msa0414420 | Msa0914760 | 0.844697 | 6.437868e-59 | -8.615850e-47 |
| Msa0424320 | Msa0914760 | 0.825522 | 4.477896e-54 | -8.615850e-47 |
| Msa0434000 | Msa0914760 | 0.806118 | 9.607883e-50 | -8.615850e-47 |
| Msa0436780 | Msa0914760 | 0.860081 | 2.648378e-63 | -8.615850e-47 |
| Msa0450000 | Msa0914760 | 0.851837 | 6.841974e-61 | -8.615850e-47 |
| Msa0452900 | Msa0914760 | 0.852049 | 5.955153e-61 | -8.615850e-47 |
| Msa0453120 | Msa0914760 | 0.841417 | 4.814015e-58 | -8.615850e-47 |
| Msa0479340 | Msa0914760 | 0.829057 | 6.370156e-55 | -8.615850e-47 |
| Msa0251320 | Msa0914760 | 0.848034 | 7.923428e-60 | -8.615850e-47 |
| Msa0251640 | Msa0914760 | 0.824084 | 9.773742e-54 | -8.615850e-47 |
| Msa0267000 | Msa0914760 | 0.831516 | 1.597321e-55 | -8.615850e-47 |
| Msa0267010 | Msa0914760 | 0.839356 | 1.663946e-57 | -8.615850e-47 |
| Msa0322360 | Msa0914760 | 0.813590 | 2.370227e-51 | -8.615850e-47 |
| Msa0337900 | Msa0914760 | 0.815878 | 7.376584e-52 | -8.615850e-47 |
| Msa0342240 | Msa0914760 | 0.827026 | 1.963763e-54 | -8.615850e-47 |
| Msa0342750 | Msa0914760 | 0.835391 | 1.724502e-56 | -8.615850e-47 |
| Msa0360510 | Msa0914760 | 0.833025 | 6.758406e-56 | -8.615850e-47 |
| Msa0491590 | Msa0914760 | 0.816516 | 5.312438e-52 | -8.615850e-47 |
| Msa0506270 | Msa0914760 | 0.805130 | 1.548336e-49 | -8.615850e-47 |
| Msa0523940 | Msa0914760 | 0.841419 | 4.806543e-58 | -8.615850e-47 |
| Msa0534540 | Msa0914760 | 0.809965 | 1.457601e-50 | -8.615850e-47 |
| Msa0545700 | Msa0914760 | 0.808599 | 2.861015e-50 | -8.615850e-47 |
| Msa0564890 | Msa0914760 | 0.818962 | 1.490257e-52 | -8.615850e-47 |
| Msa0598780 | Msa0914760 | 0.811139 | 8.129837e-51 | -8.615850e-47 |
| Msa0600700 | Msa0914760 | 0.800121 | 1.671711e-48 | -8.615850e-47 |
| Msa0844410 | Msa0914760 | 0.819857 | 9.318266e-53 | -8.615850e-47 |
| Msa0844420 | Msa0914760 | 0.815314 | 9.850736e-52 | -8.615850e-47 |
| Msa0844450 | Msa0914760 | 0.816796 | 4.598418e-52 | -8.615850e-47 |
| Msa0844470 | Msa0914760 | 0.840493 | 8.411971e-58 | -8.615850e-47 |
| Msa0844480 | Msa0914760 | 0.830468 | 2.888186e-55 | -8.615850e-47 |
| Msa0844490 | Msa0914760 | 0.870250 | 1.682323e-66 | -8.615850e-47 |
| Msa0844500 | Msa0914760 | 0.832779 | 7.778995e-56 | -8.615850e-47 |
| Msa0844510 | Msa0914760 | 0.803344 | 3.645515e-49 | -8.615850e-47 |
| Msa0845930 | Msa0914760 | 0.812388 | 4.346925e-51 | -8.615850e-47 |
| Msa0849030 | Msa0914760 | 0.808598 | 2.862429e-50 | -8.615850e-47 |
| Msa0853610 | Msa0914760 | 0.804476 | 2.120787e-49 | -8.615850e-47 |
| Msa0858980 | Msa0914760 | 0.843920 | 1.041145e-58 | -8.615850e-47 |
| Msa0864070 | Msa0914760 | 0.824459 | 7.979547e-54 | -8.615850e-47 |
| Msa0865320 | Msa0914760 | 0.805487 | 1.303777e-49 | -8.615850e-47 |
| Msa0877250 | Msa0914760 | 0.849846 | 2.488116e-60 | -8.615850e-47 |
| Msa0888130 | Msa0914760 | 0.825395 | 4.797809e-54 | -8.615850e-47 |
| Msa0888370 | Msa0914760 | 0.818137 | 2.293467e-52 | -8.615850e-47 |
| Msa0888420 | Msa0914760 | 0.921601 | 2.901601e-88 | -8.615850e-47 |
| Msa0897330 | Msa0914760 | 0.821614 | 3.677171e-53 | -8.615850e-47 |
| Msa0899430 | Msa0914760 | 0.874963 | 4.477432e-68 | -8.615850e-47 |
| Msa0899450 | Msa0914760 | 0.854586 | 1.115281e-61 | -8.615850e-47 |
| Msa0901070 | Msa0914760 | 0.815080 | 1.110540e-51 | -8.615850e-47 |
| Msa0907260 | Msa0914760 | 0.802247 | 6.140475e-49 | -8.615850e-47 |
| Msa0914760 | Msa0919850 | 0.802986 | 4.323416e-49 | -8.615850e-47 |
| Msa0914760 | Msa0927380 | 0.837440 | 5.192822e-57 | -8.615850e-47 |
| Msa0914760 | Msa0936300 | 0.804110 | 2.528042e-49 | -8.615850e-47 |
| Msa0914760 | Msa0952720 | 0.926988 | 2.194623e-91 | -8.615850e-47 |
| Msa0914760 | Msa0953120 | 0.866580 | 2.569460e-65 | -8.615850e-47 |
| Msa0914760 | Msa0956270 | 0.810089 | 1.370786e-50 | -8.615850e-47 |
| Msa0914760 | Msa0958550 | 0.866713 | 2.331668e-65 | -8.615850e-47 |
| Msa0914760 | Msa0964900 | 0.808785 | 2.611366e-50 | -8.615850e-47 |
| Msa0914760 | Msa0966750 | 0.837106 | 6.322246e-57 | -8.615850e-47 |
| Msa0914760 | Msa0967280 | 0.806998 | 6.263758e-50 | -8.615850e-47 |
| Msa0914760 | Msa0973100 | 0.810229 | 1.278924e-50 | -8.615850e-47 |
| Msa0914760 | Msa0974070 | 0.804458 | 2.139344e-49 | -8.615850e-47 |
| Msa0914760 | Msa0974080 | 0.844381 | 7.829165e-59 | -8.615850e-47 |
| Msa0914760 | Msa0976670 | 0.816387 | 5.677910e-52 | -8.615850e-47 |
| Msa0914760 | Msa0981370 | 0.848534 | 5.767040e-60 | -8.615850e-47 |
| Msa0914760 | Msa0985560 | 0.801307 | 9.577026e-49 | -8.615850e-47 |
| Msa0914760 | Msa0989060 | 0.804200 | 2.421230e-49 | -8.615850e-47 |
| Msa0914760 | Msa0991830 | 0.841619 | 4.258651e-58 | -8.615850e-47 |
| Msa0914760 | Msa0992280 | 0.807185 | 5.718043e-50 | -8.615850e-47 |
| Msa0914760 | Msa0998690 | 0.815327 | 9.783989e-52 | -8.615850e-47 |
| Msa0914760 | Msa0999220 | 0.812161 | 4.874068e-51 | -8.615850e-47 |
| Msa0914760 | Msa1000890 | 0.807835 | 4.162110e-50 | -8.615850e-47 |
| Msa0914760 | Msa1000900 | 0.805692 | 1.180877e-49 | -8.615850e-47 |
| Msa0914760 | Msa1014540 | 0.809951 | 1.467864e-50 | -8.615850e-47 |
| Msa0914760 | Msa1016280 | 0.829460 | 5.085778e-55 | -8.615850e-47 |
| Msa0914760 | Msa1025360 | 0.845558 | 3.769345e-59 | -8.615850e-47 |
| Msa0914760 | Msa1025370 | 0.836913 | 7.079283e-57 | -8.615850e-47 |
| Msa0914760 | Msa1028230 | 0.821062 | 4.929634e-53 | -8.615850e-47 |
| Msa0914760 | Msa1044830 | 0.839019 | 2.034788e-57 | -8.615850e-47 |
| Msa0914760 | Msa1044840 | 0.846925 | 1.598745e-59 | -8.615850e-47 |
| Msa0914760 | Msa1060840 | 0.845588 | 3.699052e-59 | -8.615850e-47 |
| Msa0914760 | Msa1085740 | 0.808267 | 3.369179e-50 | -8.615850e-47 |
| Msa0914760 | Msa1100980 | 0.818528 | 1.869894e-52 | -8.615850e-47 |
| Msa0914760 | Msa1109440 | 0.845622 | 3.621738e-59 | -8.615850e-47 |
| Msa0914760 | Msa1112300 | 0.836137 | 1.116153e-56 | -8.615850e-47 |
| Msa0914760 | Msa1113170 | 0.827975 | 1.162606e-54 | -8.615850e-47 |
| Msa0914760 | Msa1120610 | 0.808373 | 3.197659e-50 | -8.615850e-47 |
| Msa0914760 | Msa1121200 | 0.848024 | 7.974965e-60 | -8.615850e-47 |
| Msa0914760 | Msa1121480 | 0.816149 | 6.416748e-52 | -8.615850e-47 |
| Msa0914760 | Msa1121490 | 0.802343 | 5.869849e-49 | -8.615850e-47 |
| Msa0914760 | Msa1137570 | 0.823657 | 1.230720e-53 | -8.615850e-47 |
| Msa0914760 | Msa1146100 | 0.816228 | 6.161214e-52 | -8.615850e-47 |
| Msa0914760 | Msa1146110 | 0.802536 | 5.356355e-49 | -8.615850e-47 |
| Msa0914760 | Msa1147790 | 0.800271 | 1.558857e-48 | -8.615850e-47 |
| Msa0914760 | Msa1149360 | 0.836165 | 1.098201e-56 | -8.615850e-47 |
| Msa0914760 | Msa1150370 | 0.815878 | 7.375754e-52 | -8.615850e-47 |
| Msa0914760 | Msa1184420 | 0.825793 | 3.861766e-54 | -8.615850e-47 |
| Msa0914760 | Msa1192640 | 0.825655 | 4.163579e-54 | -8.615850e-47 |
| Msa0914760 | Msa1205020 | 0.801848 | 7.419000e-49 | -8.615850e-47 |
| Msa0914760 | Msa1248310 | 0.816135 | 6.464944e-52 | -8.615850e-47 |
| Msa0914760 | Msa1248370 | 0.805153 | 1.531631e-49 | -8.615850e-47 |
| Msa0914760 | Msa1253000 | 0.803907 | 2.785779e-49 | -8.615850e-47 |
| Msa0914760 | Msa1253020 | 0.813037 | 3.134315e-51 | -8.615850e-47 |
| Msa0914760 | Msa1269670 | 0.813418 | 2.586078e-51 | -8.615850e-47 |
| Msa0914760 | Msa1270230 | 0.843928 | 1.036237e-58 | -8.615850e-47 |
| Msa0914760 | Msa1270240 | 0.801818 | 7.524003e-49 | -8.615850e-47 |
| Msa0914760 | Msa1270270 | 0.806027 | 1.003813e-49 | -8.615850e-47 |
| Msa0914760 | Msa1276890 | 0.812441 | 4.232325e-51 | -8.615850e-47 |
| Msa0914760 | Msa1277660 | 0.813436 | 2.561892e-51 | -8.615850e-47 |
| Msa0914760 | Msa1283330 | 0.834564 | 2.787239e-56 | -8.615850e-47 |
| Msa0914760 | Msa1284680 | 0.830968 | 2.177324e-55 | -8.615850e-47 |
| Msa0914760 | Msa1285930 | 0.833159 | 6.259767e-56 | -8.615850e-47 |
| Msa0914760 | Msa1286800 | 0.834775 | 2.465489e-56 | -8.615850e-47 |
| Msa0914760 | Msa1287190 | 0.821076 | 4.893166e-53 | -8.615850e-47 |
| Msa0914760 | Msa1287800 | 0.845160 | 4.828780e-59 | -8.615850e-47 |
| Msa0914760 | Msa1287810 | 0.852665 | 3.977714e-61 | -8.615850e-47 |
| Msa0914760 | Msa1288560 | 0.867412 | 1.395007e-65 | -8.615850e-47 |
| Msa0914760 | Msa1289430 | 0.810451 | 1.144965e-50 | -8.615850e-47 |
| Msa0914760 | Msa1307890 | 0.832956 | 7.028912e-56 | -8.615850e-47 |
| Msa0914760 | Msa1344520 | 0.805391 | 1.365566e-49 | -8.615850e-47 |
| Msa0914760 | Msa1366810 | 0.834824 | 2.396822e-56 | -8.615850e-47 |
| Msa0914760 | Msa1366970 | 0.800061 | 1.719486e-48 | -8.615850e-47 |
| Msa0914760 | Msa1387280 | 0.806369 | 8.506090e-50 | -8.615850e-47 |
| Msa0914760 | Msa1400720 | 0.806021 | 1.007075e-49 | -8.615850e-47 |
| Msa0914760 | Msa1402790 | 0.826263 | 2.985374e-54 | -8.615850e-47 |
| Msa0914760 | Msa1404000 | 0.810460 | 1.140276e-50 | -8.615850e-47 |
| Msa0914760 | Msa1404020 | 0.823371 | 1.435907e-53 | -8.615850e-47 |
| Msa0914760 | Msa1410680 | 0.828122 | 1.071435e-54 | -8.615850e-47 |
| Msa0914760 | Msa1412530 | 0.815954 | 7.092764e-52 | -8.615850e-47 |
| Msa0914760 | Msa1415310 | 0.822519 | 2.268551e-53 | -8.615850e-47 |
| Msa0914760 | Msa1422180 | 0.804819 | 1.798832e-49 | -8.615850e-47 |
| Msa0914760 | Msa1433120 | 0.845646 | 3.566149e-59 | -8.615850e-47 |
| Msa0914760 | Msa1458750 | 0.818692 | 1.716335e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0914760 | MtrunA17_Chr6g0469931 | 45.041 | 242 | 85 | 7 | 11 | 212 | 11 | 244 | 7.14e-51 | 181 |
| Msa0914760 | MtrunA17_Chr6g0469811 | 44.853 | 136 | 58 | 1 | 3 | 121 | 12 | 147 | 1.76e-34 | 125 |
| Msa0914760 | MtrunA17_Chr2g0279021 | 29.885 | 261 | 150 | 7 | 152 | 385 | 6 | 260 | 6.88e-29 | 116 |
| Msa0914760 | MtrunA17_Chr7g0259081 | 36.076 | 158 | 84 | 1 | 1 | 141 | 1 | 158 | 2.00e-24 | 98.6 |
| Msa0914760 | MtrunA17_Chr4g0077081 | 38.971 | 136 | 76 | 1 | 209 | 344 | 27 | 155 | 5.29e-24 | 97.4 |
| Msa0914760 | MtrunA17_Chr7g0234721 | 35.443 | 158 | 85 | 3 | 1 | 141 | 1 | 158 | 4.71e-21 | 92.0 |
| Msa0914760 | MtrunA17_Chr8g0374181 | 32.374 | 139 | 93 | 1 | 248 | 385 | 4 | 142 | 2.16e-19 | 87.4 |
| Msa0914760 | MtrunA17_Chr4g0010241 | 36.029 | 136 | 81 | 2 | 45 | 178 | 81 | 212 | 1.53e-18 | 84.0 |
| Msa0914760 | MtrunA17_Chr3g0093401 | 22.541 | 244 | 146 | 4 | 1 | 210 | 1 | 235 | 1.42e-17 | 81.3 |
| Msa0914760 | MtrunA17_Chr4g0019691 | 36.036 | 111 | 70 | 1 | 258 | 367 | 22 | 132 | 1.55e-17 | 80.1 |
| Msa0914760 | MtrunA17_Chr1g0193821 | 32.530 | 166 | 101 | 4 | 44 | 208 | 1 | 156 | 3.41e-17 | 80.5 |
| Msa0914760 | MtrunA17_Chr1g0206481 | 23.171 | 246 | 152 | 5 | 1 | 211 | 1 | 244 | 1.63e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0914760 | AT1G52950.1 | 23.350 | 394 | 240 | 14 | 3 | 346 | 5 | 386 | 1.62e-15 | 78.6 |
Find 122 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGAGGTTGTTAAGTTTA+AGG | 0.165629 | 6_2:-29627212 | Msa0914760:CDS |
| TCAAGCGACGGTCGAATTCT+TGG | 0.257860 | 6_2:+29627043 | None:intergenic |
| ACTTGGAGCAATAGAGAAAT+AGG | 0.300188 | 6_2:+29627963 | None:intergenic |
| GCTGCGAGTGTCCTCTTTGA+TGG | 0.311525 | 6_2:-29626427 | Msa0914760:CDS |
| AGGTCCGAGTGGCCAGAATT+TGG | 0.311706 | 6_2:-29628295 | Msa0914760:CDS |
| ATCTGTGTCGGCGATGGTTA+TGG | 0.323877 | 6_2:-29626710 | Msa0914760:CDS |
| AGTTCTCAGATTCCACAATA+TGG | 0.332187 | 6_2:-29627865 | Msa0914760:CDS |
| GGTTGGGACCTCCCAAATTC+TGG | 0.334168 | 6_2:+29628283 | None:intergenic |
| TTCTCTATTGCTCCAAGTGT+TGG | 0.359141 | 6_2:-29627958 | Msa0914760:CDS |
| GTTGTTGGTGACATTGTTGA+TGG | 0.359844 | 6_2:-29626947 | Msa0914760:CDS |
| CATTGTTGATGGTTTGGTTG+AGG | 0.360306 | 6_2:-29626936 | Msa0914760:CDS |
| TCAAATGAAGACCAAGGTTC+AGG | 0.365297 | 6_2:-29627896 | Msa0914760:CDS |
| GCATCCCCTTCCCTTAGTTT+CGG | 0.365353 | 6_2:+29627997 | None:intergenic |
| GGATTATGTGCGCGCAAGAT+TGG | 0.368593 | 6_2:-29627844 | Msa0914760:CDS |
| AAGGTTGAGTGTGCATTGTT+TGG | 0.369139 | 6_2:-29627471 | Msa0914760:CDS |
| GGTCCGAGTGGCCAGAATTT+GGG | 0.377633 | 6_2:-29628294 | Msa0914760:CDS |
| GATTATGTGCGCGCAAGATT+GGG | 0.379128 | 6_2:-29627843 | Msa0914760:CDS |
| TTGATGGTTCATACAGGGTT+AGG | 0.385662 | 6_2:-29626411 | Msa0914760:CDS |
| GCAAGATTGGGGACGTTTGT+GGG | 0.386052 | 6_2:-29627831 | Msa0914760:CDS |
| CGCAAGATTGGGGACGTTTG+TGG | 0.387411 | 6_2:-29627832 | Msa0914760:CDS |
| TCTCTATTGCTCCAAGTGTT+GGG | 0.392400 | 6_2:-29627957 | Msa0914760:CDS |
| TAATGTATTGTAGACATCAT+TGG | 0.398299 | 6_2:-29627701 | Msa0914760:intron |
| ACAAACTAAAGTACAACAAT+AGG | 0.403538 | 6_2:+29627396 | None:intergenic |
| ATTGTTGATGGTTTGGTTGA+GGG | 0.406007 | 6_2:-29626935 | Msa0914760:CDS |
| TTCAGCTTCAGAAGCTCATC+AGG | 0.406927 | 6_2:+29626487 | None:intergenic |
| CTGCTGAGAAGGAGTACGTT+CGG | 0.412854 | 6_2:-29627661 | Msa0914760:CDS |
| TCCTCTTTGATGGTTCATAC+AGG | 0.413679 | 6_2:-29626417 | Msa0914760:CDS |
| CGTTCAGTTGTCTCATGGAT+TGG | 0.415135 | 6_2:-29627526 | Msa0914760:intron |
| TCAAGTGAGTTGGTCTGCTC+AGG | 0.415558 | 6_2:+29628251 | None:intergenic |
| GTTGTGTTTGTTGTGTTTGA+CGG | 0.417315 | 6_2:-29626683 | Msa0914760:CDS |
| TGGTGACATTGTTGATGGTT+TGG | 0.422712 | 6_2:-29626942 | Msa0914760:CDS |
| TTGGACCAATCACCGGCATC+GGG | 0.424932 | 6_2:+29627062 | None:intergenic |
| TGCACACTCAACCTTGCCAC+TGG | 0.431286 | 6_2:+29627479 | None:intergenic |
| TTCCCATGAGCTTTAGCAAA+AGG | 0.435219 | 6_2:+29627436 | None:intergenic |
| TGCTGTTGATTACGACCATT+TGG | 0.440950 | 6_2:-29627806 | Msa0914760:CDS |
| TGCTCAGGCTTCAGAAAGGT+TGG | 0.443164 | 6_2:+29628266 | None:intergenic |
| CAAGGACTCTTGGAGGTTGA+AGG | 0.443571 | 6_2:-29628315 | Msa0914760:CDS |
| CTCATGGGAAAATCTTTGAA+TGG | 0.447927 | 6_2:-29627423 | Msa0914760:CDS |
| TTGTGCCTAGCAAGGACTCT+TGG | 0.448471 | 6_2:-29628325 | Msa0914760:CDS |
| TTGTTGATGGTTTGGTTGAG+GGG | 0.451983 | 6_2:-29626934 | Msa0914760:CDS |
| TCTGTGTCGGCGATGGTTAT+GGG | 0.459259 | 6_2:-29626709 | Msa0914760:CDS |
| TGTTGATATTCTTAGGTATG+AGG | 0.459645 | 6_2:-29626738 | Msa0914760:intron |
| TGCTGGTCATAGGGTGAACT+TGG | 0.463484 | 6_2:-29627005 | Msa0914760:CDS |
| TGCTGAGAAGGAGTACGTTC+GGG | 0.464503 | 6_2:-29627660 | Msa0914760:CDS |
| TTAACAACCTCATCAATGTC+AGG | 0.465589 | 6_2:+29627220 | None:intergenic |
| ATTATCGTTCAGTTGTCTCA+TGG | 0.466804 | 6_2:-29627531 | Msa0914760:intron |
| CTTGGACCAATCACCGGCAT+CGG | 0.467503 | 6_2:+29627061 | None:intergenic |
| ATGTGTTCTAGCCGAAACTA+AGG | 0.477740 | 6_2:-29628008 | Msa0914760:intron |
| GAGGTTGTTAAGTTTAAGGA+GGG | 0.479611 | 6_2:-29627208 | Msa0914760:CDS |
| TCATGGGAAAATCTTTGAAT+GGG | 0.481759 | 6_2:-29627422 | Msa0914760:CDS |
| CCTCTTTGATGGTTCATACA+GGG | 0.482351 | 6_2:-29626416 | Msa0914760:CDS |
| TGCCTAGCAAGGACTCTTGG+AGG | 0.484658 | 6_2:-29628322 | Msa0914760:CDS |
| TGTTGATGGTTTGGTTGAGG+GGG | 0.485457 | 6_2:-29626933 | Msa0914760:CDS |
| GACAATGGGAATTATGTTGT+TGG | 0.487542 | 6_2:-29626962 | Msa0914760:CDS |
| TGATTTGGTGTCGGCTGCCA+AGG | 0.487713 | 6_2:-29626627 | Msa0914760:intron |
| TTCAATACTCACCAACCAAA+TGG | 0.490463 | 6_2:+29627791 | None:intergenic |
| TGAATGATGTTGTTGACAAT+GGG | 0.491991 | 6_2:-29626976 | Msa0914760:CDS |
| ATGTGTTTCAGATGGTTCCT+AGG | 0.494807 | 6_2:-29626826 | Msa0914760:intron |
| ACAGCTGAAATCAAATCAAA+GGG | 0.495812 | 6_2:+29628347 | None:intergenic |
| GCTCAGGCTTCAGAAAGGTT+GGG | 0.498445 | 6_2:+29628267 | None:intergenic |
| GAACGGTATGACCCAACACT+TGG | 0.500609 | 6_2:+29627946 | None:intergenic |
| CAGTAGTAAGCACCAAAGTC+GGG | 0.502969 | 6_2:+29626866 | None:intergenic |
| TTGAATGATGTTGTTGACAA+TGG | 0.504599 | 6_2:-29626977 | Msa0914760:CDS |
| CTTTGGTGCTTACTACTGCA+AGG | 0.505637 | 6_2:-29626861 | Msa0914760:CDS |
| CCTCCCAAATTCTGGCCACT+CGG | 0.509318 | 6_2:+29628291 | None:intergenic |
| GACATCATTGGTGTTATGAC+TGG | 0.510553 | 6_2:-29627689 | Msa0914760:CDS |
| GACTGGGATTTCTGCTGAGA+AGG | 0.512732 | 6_2:-29627672 | Msa0914760:CDS |
| AGAGGTGTTACACCCGACTT+TGG | 0.514620 | 6_2:-29626878 | Msa0914760:CDS |
| AGGTAAACAGTGTAGTGATT+TGG | 0.515437 | 6_2:-29626642 | Msa0914760:CDS |
| AACAGCTGAAATCAAATCAA+AGG | 0.516399 | 6_2:+29628346 | None:intergenic |
| CGTGAAGCATGTGTTTCAGA+TGG | 0.519230 | 6_2:-29626834 | Msa0914760:CDS |
| TGAGGTTGTTAAGTTTAAGG+AGG | 0.523181 | 6_2:-29627209 | Msa0914760:CDS |
| TGATGAGCTTCTGAAGCTGA+AGG | 0.526438 | 6_2:-29626485 | Msa0914760:CDS |
| GCAGTAGTAAGCACCAAAGT+CGG | 0.526570 | 6_2:+29626865 | None:intergenic |
| GGTTGTGTTGCCCAGTGGCA+AGG | 0.528855 | 6_2:-29627490 | Msa0914760:CDS |
| TGAGCAAACAGCCCCGATGC+CGG | 0.529201 | 6_2:-29627074 | Msa0914760:CDS |
| GTCAGGGTTGATAAGAATCC+TGG | 0.532365 | 6_2:+29627237 | None:intergenic |
| TTCAGCTGTTGTGCCTAGCA+AGG | 0.543003 | 6_2:-29628333 | Msa0914760:CDS |
| GATGGTGCTCATTGATGAAA+AGG | 0.543220 | 6_2:-29628228 | Msa0914760:intron |
| TTTGGTGCTTACTACTGCAA+GGG | 0.563438 | 6_2:-29626860 | Msa0914760:CDS |
| CGAATTCTTGGACCAATCAC+CGG | 0.566155 | 6_2:+29627055 | None:intergenic |
| GGTCTGCTCAGGCTTCAGAA+AGG | 0.574625 | 6_2:+29628262 | None:intergenic |
| GGTGATATGCAGAATTTGCT+AGG | 0.575790 | 6_2:-29626662 | Msa0914760:CDS |
| GCACACTCAACCTTGCCACT+GGG | 0.576376 | 6_2:+29627480 | None:intergenic |
| ACTCTCACTTGCCTGAACCT+TGG | 0.576384 | 6_2:+29627885 | None:intergenic |
| GGAGTACGTTCGGGATGGCA+AGG | 0.577455 | 6_2:-29627651 | Msa0914760:intron |
| ATTGGTGGTATCCTGCCTGT+AGG | 0.580740 | 6_2:-29626907 | Msa0914760:CDS |
| ATTATGTGCGCGCAAGATTG+GGG | 0.583537 | 6_2:-29627842 | Msa0914760:CDS |
| ACATCATTGGTGTTATGACT+GGG | 0.584395 | 6_2:-29627688 | Msa0914760:CDS |
| GAGCACCATCTCAAGTGAGT+TGG | 0.587463 | 6_2:+29628241 | None:intergenic |
| AACACCTCTATGAAACCTAC+AGG | 0.588301 | 6_2:+29626892 | None:intergenic |
| CTAGCCGAAACTAAGGGAAG+GGG | 0.589158 | 6_2:-29628001 | Msa0914760:intron |
| TTCTAGCCGAAACTAAGGGA+AGG | 0.601859 | 6_2:-29628003 | Msa0914760:intron |
| CCCTGTATGAACCATCAAAG+AGG | 0.606077 | 6_2:+29626416 | None:intergenic |
| TATCAACCCTGACATTGATG+AGG | 0.606528 | 6_2:-29627227 | Msa0914760:CDS |
| TTGTGTAGGATTGATGTGCA+TGG | 0.606996 | 6_2:-29627100 | Msa0914760:intron |
| GCAGACCAACTCACTTGAGA+TGG | 0.607842 | 6_2:-29628246 | Msa0914760:CDS |
| TCTAGCCGAAACTAAGGGAA+GGG | 0.608031 | 6_2:-29628002 | Msa0914760:intron |
| TGGATTGGTTATTTGTCGTG+TGG | 0.609341 | 6_2:-29627511 | Msa0914760:CDS |
| GATGAGCTTCTGAAGCTGAA+GGG | 0.610729 | 6_2:-29626484 | Msa0914760:CDS |
| CCTCTATGAAACCTACAGGC+AGG | 0.613923 | 6_2:+29626896 | None:intergenic |
| TGTGTTCTAGCCGAAACTAA+GGG | 0.617913 | 6_2:-29628007 | Msa0914760:intron |
| GTGAAGATCTGTGTCGGCGA+TGG | 0.620061 | 6_2:-29626716 | Msa0914760:CDS |
| AGGTTGTTAAGTTTAAGGAG+GGG | 0.621121 | 6_2:-29627207 | Msa0914760:intron |
| GAGAAGGAGTACGTTCGGGA+TGG | 0.623106 | 6_2:-29627656 | Msa0914760:CDS |
| AGAACGTGTTGAATGCCACC+AGG | 0.623788 | 6_2:-29627255 | Msa0914760:CDS |
| GTTGATTACGACCATTTGGT+TGG | 0.626214 | 6_2:-29627802 | Msa0914760:intron |
| AACCTCCAAGAGTCCTTGCT+AGG | 0.629201 | 6_2:+29628320 | None:intergenic |
| TAACAACCTCATCAATGTCA+GGG | 0.638796 | 6_2:+29627221 | None:intergenic |
| TATGAGGTGAAGATCTGTGT+CGG | 0.640057 | 6_2:-29626722 | Msa0914760:CDS |
| TGTAAGGATGAAATGTCGAA+CGG | 0.643893 | 6_2:+29627929 | None:intergenic |
| ATTCAAAGTCGAGAAATCAT+CGG | 0.652813 | 6_2:-29626449 | Msa0914760:CDS |
| ACAGTGTAGTGATTTGGTGT+CGG | 0.655103 | 6_2:-29626636 | Msa0914760:CDS |
| CCTGCCTGTAGGTTTCATAG+AGG | 0.657138 | 6_2:-29626896 | Msa0914760:CDS |
| AAGCTCATCAGGATAAAACC+CGG | 0.657890 | 6_2:+29626498 | None:intergenic |
| CCGAGTGGCCAGAATTTGGG+AGG | 0.668427 | 6_2:-29628291 | Msa0914760:CDS |
| CGTGTGGTTGTGTTGCCCAG+TGG | 0.688882 | 6_2:-29627495 | Msa0914760:CDS |
| TGGACCAATCACCGGCATCG+GGG | 0.690300 | 6_2:+29627063 | None:intergenic |
| GGTTCATACAGGGTTAGGAG+AGG | 0.702192 | 6_2:-29626406 | Msa0914760:CDS |
| AGGGTTGATAAGAATCCTGG+TGG | 0.721356 | 6_2:+29627240 | None:intergenic |
| CAGCTGAAATCAAATCAAAG+GGG | 0.730674 | 6_2:+29628348 | None:intergenic |
| TTGGAGGTTGAAGGTCCGAG+TGG | 0.736514 | 6_2:-29628306 | Msa0914760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTTCAAAAATGTAT+AGG | - | chr6_2:29628222-29628241 | Msa0914760:intron | 10.0% |
| !! | TTATTATTTCAAAAATGTAT+AGG | - | chr6_2:29628222-29628241 | Msa0914760:intron | 10.0% |
| !!! | TGTTGTAATGTTTTTGTATT+TGG | - | chr6_2:29626613-29626632 | Msa0914760:intron | 20.0% |
| !!! | ATTTGAAAAAGTAACTTGTA+AGG | + | chr6_2:29626842-29626861 | None:intergenic | 20.0% |
| !! | TATGTTATGTTGATATTCTT+AGG | - | chr6_2:29628007-29628026 | Msa0914760:intron | 20.0% |
| !!! | ATTCTTTTTTAAGAATACCT+TGG | + | chr6_2:29628145-29628164 | None:intergenic | 20.0% |
| !!! | TGTTGTAATGTTTTTGTATT+TGG | - | chr6_2:29626613-29626632 | Msa0914760:intron | 20.0% |
| !!! | ATTTGAAAAAGTAACTTGTA+AGG | + | chr6_2:29626842-29626861 | None:intergenic | 20.0% |
| !! | TATGTTATGTTGATATTCTT+AGG | - | chr6_2:29628007-29628026 | Msa0914760:intron | 20.0% |
| !!! | ATTCTTTTTTAAGAATACCT+TGG | + | chr6_2:29628145-29628164 | None:intergenic | 20.0% |
| !! | TGTTTATGTTGTGTAGTTTT+TGG | - | chr6_2:29626553-29626572 | Msa0914760:intron | 25.0% |
| !!! | TAGTTTTTGGAGTTTTGATA+TGG | - | chr6_2:29626566-29626585 | Msa0914760:intron | 25.0% |
| ! | AAACATTACAACATGAACAA+AGG | + | chr6_2:29626606-29626625 | None:intergenic | 25.0% |
| !! | TTTTTGTATTTGGTATTGTC+TGG | - | chr6_2:29626623-29626642 | Msa0914760:intron | 25.0% |
| !!! | TTTTTAGTTTTATTGTCGTG+TGG | - | chr6_2:29627002-29627021 | Msa0914760:CDS | 25.0% |
| ! | TAATGTATTGTAGACATCAT+TGG | - | chr6_2:29627051-29627070 | Msa0914760:CDS | 25.0% |
| ! | ACAAACTAAAGTACAACAAT+AGG | + | chr6_2:29627359-29627378 | None:intergenic | 25.0% |
| !!! | TGTTGTACTTTAGTTTGTTA+AGG | - | chr6_2:29627361-29627380 | Msa0914760:intron | 25.0% |
| !!! | TTGGTAATTTTTTGTAGACA+AGG | - | chr6_2:29627465-29627484 | Msa0914760:CDS | 25.0% |
| !! | TTTGTGTTTGTATTTTGTGT+AGG | - | chr6_2:29627638-29627657 | Msa0914760:intron | 25.0% |
| !! | AATGTCTTGCAATTTTGTTA+TGG | - | chr6_2:29628179-29628198 | Msa0914760:intron | 25.0% |
| !! | TGTTTATGTTGTGTAGTTTT+TGG | - | chr6_2:29626553-29626572 | Msa0914760:intron | 25.0% |
| !!! | TAGTTTTTGGAGTTTTGATA+TGG | - | chr6_2:29626566-29626585 | Msa0914760:intron | 25.0% |
| ! | AAACATTACAACATGAACAA+AGG | + | chr6_2:29626606-29626625 | None:intergenic | 25.0% |
| !! | TTTTTGTATTTGGTATTGTC+TGG | - | chr6_2:29626623-29626642 | Msa0914760:intron | 25.0% |
| !!! | TTTTTAGTTTTATTGTCGTG+TGG | - | chr6_2:29627002-29627021 | Msa0914760:CDS | 25.0% |
| ! | TAATGTATTGTAGACATCAT+TGG | - | chr6_2:29627051-29627070 | Msa0914760:CDS | 25.0% |
| ! | ACAAACTAAAGTACAACAAT+AGG | + | chr6_2:29627359-29627378 | None:intergenic | 25.0% |
| !!! | TGTTGTACTTTAGTTTGTTA+AGG | - | chr6_2:29627361-29627380 | Msa0914760:intron | 25.0% |
| !!! | TTGGTAATTTTTTGTAGACA+AGG | - | chr6_2:29627465-29627484 | Msa0914760:CDS | 25.0% |
| !! | TTTGTGTTTGTATTTTGTGT+AGG | - | chr6_2:29627638-29627657 | Msa0914760:intron | 25.0% |
| !! | AATGTCTTGCAATTTTGTTA+TGG | - | chr6_2:29628179-29628198 | Msa0914760:intron | 25.0% |
| ACAGCTGAAATCAAATCAAA+GGG | + | chr6_2:29626408-29626427 | None:intergenic | 30.0% | |
| AACAGCTGAAATCAAATCAA+AGG | + | chr6_2:29626409-29626428 | None:intergenic | 30.0% | |
| ! | AGAGAAATAGGACATTTTGT+AGG | + | chr6_2:29626780-29626799 | None:intergenic | 30.0% |
| !!! | ACTTTTTCAAATGAAGACCA+AGG | - | chr6_2:29626850-29626869 | Msa0914760:CDS | 30.0% |
| !! | TTTATTGTCGTGTGGTTTTA+TGG | - | chr6_2:29627010-29627029 | Msa0914760:CDS | 30.0% |
| TCATGGGAAAATCTTTGAAT+GGG | - | chr6_2:29627330-29627349 | Msa0914760:intron | 30.0% | |
| GTTAAGGTTAAGATATTTCG+AGG | - | chr6_2:29627377-29627396 | Msa0914760:intron | 30.0% | |
| TGATGAGGTTGTTAAGTTTA+AGG | - | chr6_2:29627540-29627559 | Msa0914760:intron | 30.0% | |
| TTGAATGATGTTGTTGACAA+TGG | - | chr6_2:29627775-29627794 | Msa0914760:intron | 30.0% | |
| TGAATGATGTTGTTGACAAT+GGG | - | chr6_2:29627776-29627795 | Msa0914760:intron | 30.0% | |
| GCTAATGTTATCCTAATGAT+TGG | - | chr6_2:29627953-29627972 | Msa0914760:CDS | 30.0% | |
| TGTTGATATTCTTAGGTATG+AGG | - | chr6_2:29628014-29628033 | Msa0914760:intron | 30.0% | |
| ! | TTTGTTATGGATTTGTGTGT+TGG | - | chr6_2:29628192-29628211 | Msa0914760:intron | 30.0% |
| ATTCAAAGTCGAGAAATCAT+CGG | - | chr6_2:29628303-29628322 | Msa0914760:CDS | 30.0% | |
| ACAGCTGAAATCAAATCAAA+GGG | + | chr6_2:29626408-29626427 | None:intergenic | 30.0% | |
| AACAGCTGAAATCAAATCAA+AGG | + | chr6_2:29626409-29626428 | None:intergenic | 30.0% | |
| ! | AGAGAAATAGGACATTTTGT+AGG | + | chr6_2:29626780-29626799 | None:intergenic | 30.0% |
| !!! | ACTTTTTCAAATGAAGACCA+AGG | - | chr6_2:29626850-29626869 | Msa0914760:CDS | 30.0% |
| !! | TTTATTGTCGTGTGGTTTTA+TGG | - | chr6_2:29627010-29627029 | Msa0914760:CDS | 30.0% |
| TCATGGGAAAATCTTTGAAT+GGG | - | chr6_2:29627330-29627349 | Msa0914760:intron | 30.0% | |
| GTTAAGGTTAAGATATTTCG+AGG | - | chr6_2:29627377-29627396 | Msa0914760:intron | 30.0% | |
| TGATGAGGTTGTTAAGTTTA+AGG | - | chr6_2:29627540-29627559 | Msa0914760:intron | 30.0% | |
| TTGAATGATGTTGTTGACAA+TGG | - | chr6_2:29627775-29627794 | Msa0914760:intron | 30.0% | |
| TGAATGATGTTGTTGACAAT+GGG | - | chr6_2:29627776-29627795 | Msa0914760:intron | 30.0% | |
| GCTAATGTTATCCTAATGAT+TGG | - | chr6_2:29627953-29627972 | Msa0914760:CDS | 30.0% | |
| TGTTGATATTCTTAGGTATG+AGG | - | chr6_2:29628014-29628033 | Msa0914760:intron | 30.0% | |
| ! | TTTGTTATGGATTTGTGTGT+TGG | - | chr6_2:29628192-29628211 | Msa0914760:intron | 30.0% |
| ATTCAAAGTCGAGAAATCAT+CGG | - | chr6_2:29628303-29628322 | Msa0914760:CDS | 30.0% | |
| CAGCTGAAATCAAATCAAAG+GGG | + | chr6_2:29626407-29626426 | None:intergenic | 35.0% | |
| ACAAAGACAGAACTACAGAT+TGG | + | chr6_2:29626651-29626670 | None:intergenic | 35.0% | |
| ! | GTTTTGCCTAATGAGTTATC+TGG | - | chr6_2:29626673-29626692 | Msa0914760:CDS | 35.0% |
| ACTTGGAGCAATAGAGAAAT+AGG | + | chr6_2:29626792-29626811 | None:intergenic | 35.0% | |
| TGTAAGGATGAAATGTCGAA+CGG | + | chr6_2:29626826-29626845 | None:intergenic | 35.0% | |
| AGTTCTCAGATTCCACAATA+TGG | - | chr6_2:29626887-29626906 | Msa0914760:CDS | 35.0% | |
| TTCAATACTCACCAACCAAA+TGG | + | chr6_2:29626964-29626983 | None:intergenic | 35.0% | |
| !! | ACATCATTGGTGTTATGACT+GGG | - | chr6_2:29627064-29627083 | Msa0914760:CDS | 35.0% |
| !!! | TGTCAGTGTTTTTTGTGAAG+AGG | - | chr6_2:29627174-29627193 | Msa0914760:intron | 35.0% |
| ATTATCGTTCAGTTGTCTCA+TGG | - | chr6_2:29627221-29627240 | Msa0914760:CDS | 35.0% | |
| CTCATGGGAAAATCTTTGAA+TGG | - | chr6_2:29627329-29627348 | Msa0914760:intron | 35.0% | |
| GGTTAAGATATTTCGAGGTA+TGG | - | chr6_2:29627382-29627401 | Msa0914760:intron | 35.0% | |
| !!! | TAGTGGTTTTGGTGAATCTT+TGG | - | chr6_2:29627446-29627465 | Msa0914760:CDS | 35.0% |
| TAACAACCTCATCAATGTCA+GGG | + | chr6_2:29627534-29627553 | None:intergenic | 35.0% | |
| TTAACAACCTCATCAATGTC+AGG | + | chr6_2:29627535-29627554 | None:intergenic | 35.0% | |
| TGAGGTTGTTAAGTTTAAGG+AGG | - | chr6_2:29627543-29627562 | Msa0914760:intron | 35.0% | |
| GAGGTTGTTAAGTTTAAGGA+GGG | - | chr6_2:29627544-29627563 | Msa0914760:intron | 35.0% | |
| AGGTTGTTAAGTTTAAGGAG+GGG | - | chr6_2:29627545-29627564 | Msa0914760:intron | 35.0% | |
| AAAAACTCTTCTTCAAGCGA+CGG | + | chr6_2:29627724-29627743 | None:intergenic | 35.0% | |
| GACAATGGGAATTATGTTGT+TGG | - | chr6_2:29627790-29627809 | Msa0914760:intron | 35.0% | |
| !! | ATTGTTGATGGTTTGGTTGA+GGG | - | chr6_2:29627817-29627836 | Msa0914760:CDS | 35.0% |
| GGATAACATTAGCATTACCT+AGG | + | chr6_2:29627946-29627965 | None:intergenic | 35.0% | |
| ACAGAAAGACACCAATCATT+AGG | + | chr6_2:29627967-29627986 | None:intergenic | 35.0% | |
| !! | GTTGTGTTTGTTGTGTTTGA+CGG | - | chr6_2:29628069-29628088 | Msa0914760:intron | 35.0% |
| AGGTAAACAGTGTAGTGATT+TGG | - | chr6_2:29628110-29628129 | Msa0914760:intron | 35.0% | |
| AATGTATAGGCCAAAAATGC+CGG | - | chr6_2:29628235-29628254 | Msa0914760:CDS | 35.0% | |
| CAGCTGAAATCAAATCAAAG+GGG | + | chr6_2:29626407-29626426 | None:intergenic | 35.0% | |
| ACAAAGACAGAACTACAGAT+TGG | + | chr6_2:29626651-29626670 | None:intergenic | 35.0% | |
| ! | GTTTTGCCTAATGAGTTATC+TGG | - | chr6_2:29626673-29626692 | Msa0914760:CDS | 35.0% |
| ACTTGGAGCAATAGAGAAAT+AGG | + | chr6_2:29626792-29626811 | None:intergenic | 35.0% | |
| TGTAAGGATGAAATGTCGAA+CGG | + | chr6_2:29626826-29626845 | None:intergenic | 35.0% | |
| AGTTCTCAGATTCCACAATA+TGG | - | chr6_2:29626887-29626906 | Msa0914760:CDS | 35.0% | |
| TTCAATACTCACCAACCAAA+TGG | + | chr6_2:29626964-29626983 | None:intergenic | 35.0% | |
| !! | ACATCATTGGTGTTATGACT+GGG | - | chr6_2:29627064-29627083 | Msa0914760:CDS | 35.0% |
| !!! | TGTCAGTGTTTTTTGTGAAG+AGG | - | chr6_2:29627174-29627193 | Msa0914760:intron | 35.0% |
| ATTATCGTTCAGTTGTCTCA+TGG | - | chr6_2:29627221-29627240 | Msa0914760:CDS | 35.0% | |
| CTCATGGGAAAATCTTTGAA+TGG | - | chr6_2:29627329-29627348 | Msa0914760:intron | 35.0% | |
| GGTTAAGATATTTCGAGGTA+TGG | - | chr6_2:29627382-29627401 | Msa0914760:intron | 35.0% | |
| !!! | TAGTGGTTTTGGTGAATCTT+TGG | - | chr6_2:29627446-29627465 | Msa0914760:CDS | 35.0% |
| TAACAACCTCATCAATGTCA+GGG | + | chr6_2:29627534-29627553 | None:intergenic | 35.0% | |
| TTAACAACCTCATCAATGTC+AGG | + | chr6_2:29627535-29627554 | None:intergenic | 35.0% | |
| TGAGGTTGTTAAGTTTAAGG+AGG | - | chr6_2:29627543-29627562 | Msa0914760:intron | 35.0% | |
| GAGGTTGTTAAGTTTAAGGA+GGG | - | chr6_2:29627544-29627563 | Msa0914760:intron | 35.0% | |
| AGGTTGTTAAGTTTAAGGAG+GGG | - | chr6_2:29627545-29627564 | Msa0914760:intron | 35.0% | |
| AAAAACTCTTCTTCAAGCGA+CGG | + | chr6_2:29627724-29627743 | None:intergenic | 35.0% | |
| GACAATGGGAATTATGTTGT+TGG | - | chr6_2:29627790-29627809 | Msa0914760:intron | 35.0% | |
| !! | ATTGTTGATGGTTTGGTTGA+GGG | - | chr6_2:29627817-29627836 | Msa0914760:CDS | 35.0% |
| GGATAACATTAGCATTACCT+AGG | + | chr6_2:29627946-29627965 | None:intergenic | 35.0% | |
| ACAGAAAGACACCAATCATT+AGG | + | chr6_2:29627967-29627986 | None:intergenic | 35.0% | |
| !! | GTTGTGTTTGTTGTGTTTGA+CGG | - | chr6_2:29628069-29628088 | Msa0914760:intron | 35.0% |
| AGGTAAACAGTGTAGTGATT+TGG | - | chr6_2:29628110-29628129 | Msa0914760:intron | 35.0% | |
| AATGTATAGGCCAAAAATGC+CGG | - | chr6_2:29628235-29628254 | Msa0914760:CDS | 35.0% | |
| GATGGTGCTCATTGATGAAA+AGG | - | chr6_2:29626524-29626543 | Msa0914760:intron | 40.0% | |
| GGATCTCCAGATAACTCATT+AGG | + | chr6_2:29626682-29626701 | None:intergenic | 40.0% | |
| AATGAGTTATCTGGAGATCC+AGG | - | chr6_2:29626682-29626701 | Msa0914760:CDS | 40.0% | |
| ATGAGTTATCTGGAGATCCA+GGG | - | chr6_2:29626683-29626702 | Msa0914760:CDS | 40.0% | |
| ATGTGTTCTAGCCGAAACTA+AGG | - | chr6_2:29626744-29626763 | Msa0914760:intron | 40.0% | |
| TGTGTTCTAGCCGAAACTAA+GGG | - | chr6_2:29626745-29626764 | Msa0914760:intron | 40.0% | |
| TTCTCTATTGCTCCAAGTGT+TGG | - | chr6_2:29626794-29626813 | Msa0914760:intron | 40.0% | |
| TCTCTATTGCTCCAAGTGTT+GGG | - | chr6_2:29626795-29626814 | Msa0914760:intron | 40.0% | |
| TCAAATGAAGACCAAGGTTC+AGG | - | chr6_2:29626856-29626875 | Msa0914760:CDS | 40.0% | |
| ! | TGCTGTTGATTACGACCATT+TGG | - | chr6_2:29626946-29626965 | Msa0914760:CDS | 40.0% |
| GTTGATTACGACCATTTGGT+TGG | - | chr6_2:29626950-29626969 | Msa0914760:CDS | 40.0% | |
| !!! | GTGTGGTTTTATGGTTGTTG+AGG | - | chr6_2:29627019-29627038 | Msa0914760:CDS | 40.0% |
| !! | GACATCATTGGTGTTATGAC+TGG | - | chr6_2:29627063-29627082 | Msa0914760:CDS | 40.0% |
| CAACTCGATCACAATCATCT+TGG | + | chr6_2:29627130-29627149 | None:intergenic | 40.0% | |
| !! | TGGATTGGTTATTTGTCGTG+TGG | - | chr6_2:29627241-29627260 | Msa0914760:CDS | 40.0% |
| AAGGTTGAGTGTGCATTGTT+TGG | - | chr6_2:29627281-29627300 | Msa0914760:intron | 40.0% | |
| ! | TGACCTTTTGCTAAAGCTCA+TGG | - | chr6_2:29627313-29627332 | Msa0914760:intron | 40.0% |
| ! | GACCTTTTGCTAAAGCTCAT+GGG | - | chr6_2:29627314-29627333 | Msa0914760:intron | 40.0% |
| ! | TTCCCATGAGCTTTAGCAAA+AGG | + | chr6_2:29627319-29627338 | None:intergenic | 40.0% |
| AAACCACTACGAAGGATTGA+CGG | + | chr6_2:29627435-29627454 | None:intergenic | 40.0% | |
| ! | TCAATCCTTCGTAGTGGTTT+TGG | - | chr6_2:29627435-29627454 | Msa0914760:CDS | 40.0% |
| ATTCACCAAAACCACTACGA+AGG | + | chr6_2:29627443-29627462 | None:intergenic | 40.0% | |
| TATCAACCCTGACATTGATG+AGG | - | chr6_2:29627525-29627544 | Msa0914760:intron | 40.0% | |
| TTGTGTAGGATTGATGTGCA+TGG | - | chr6_2:29627652-29627671 | Msa0914760:CDS | 40.0% | |
| ! | GTCGCTTGAAGAAGAGTTTT+TGG | - | chr6_2:29627723-29627742 | Msa0914760:intron | 40.0% |
| !!! | GAAGAAGAGTTTTTGGTTGC+TGG | - | chr6_2:29627730-29627749 | Msa0914760:intron | 40.0% |
| !!! | AGTTTTTGGTTGCTGGTCAT+AGG | - | chr6_2:29627737-29627756 | Msa0914760:intron | 40.0% |
| !!! | GTTTTTGGTTGCTGGTCATA+GGG | - | chr6_2:29627738-29627757 | Msa0914760:intron | 40.0% |
| !! | GTTGTTGGTGACATTGTTGA+TGG | - | chr6_2:29627805-29627824 | Msa0914760:CDS | 40.0% |
| !! | TGGTGACATTGTTGATGGTT+TGG | - | chr6_2:29627810-29627829 | Msa0914760:CDS | 40.0% |
| !! | CATTGTTGATGGTTTGGTTG+AGG | - | chr6_2:29627816-29627835 | Msa0914760:CDS | 40.0% |
| !! | TTGTTGATGGTTTGGTTGAG+GGG | - | chr6_2:29627818-29627837 | Msa0914760:CDS | 40.0% |
| AACACCTCTATGAAACCTAC+AGG | + | chr6_2:29627863-29627882 | None:intergenic | 40.0% | |
| !! | TTTGGTGCTTACTACTGCAA+GGG | - | chr6_2:29627892-29627911 | Msa0914760:CDS | 40.0% |
| ATGTGTTTCAGATGGTTCCT+AGG | - | chr6_2:29627926-29627945 | Msa0914760:CDS | 40.0% | |
| TATGAGGTGAAGATCTGTGT+CGG | - | chr6_2:29628030-29628049 | Msa0914760:intron | 40.0% | |
| ! | GGTGATATGCAGAATTTGCT+AGG | - | chr6_2:29628090-29628109 | Msa0914760:intron | 40.0% |
| !! | ACAGTGTAGTGATTTGGTGT+CGG | - | chr6_2:29628116-29628135 | Msa0914760:intron | 40.0% |
| GTTATGGATTTGTGTGTTGG+TGG | - | chr6_2:29628195-29628214 | Msa0914760:intron | 40.0% | |
| ATGTATAGGCCAAAAATGCC+GGG | - | chr6_2:29628236-29628255 | Msa0914760:CDS | 40.0% | |
| ! | AGGATAAAACCCGGCATTTT+TGG | + | chr6_2:29628248-29628267 | None:intergenic | 40.0% |
| AAGCTCATCAGGATAAAACC+CGG | + | chr6_2:29628257-29628276 | None:intergenic | 40.0% | |
| ! | TCCTCTTTGATGGTTCATAC+AGG | - | chr6_2:29628335-29628354 | Msa0914760:CDS | 40.0% |
| ! | CCTCTTTGATGGTTCATACA+GGG | - | chr6_2:29628336-29628355 | Msa0914760:CDS | 40.0% |
| ! | TTGATGGTTCATACAGGGTT+AGG | - | chr6_2:29628341-29628360 | Msa0914760:CDS | 40.0% |
| GATGGTGCTCATTGATGAAA+AGG | - | chr6_2:29626524-29626543 | Msa0914760:intron | 40.0% | |
| GGATCTCCAGATAACTCATT+AGG | + | chr6_2:29626682-29626701 | None:intergenic | 40.0% | |
| AATGAGTTATCTGGAGATCC+AGG | - | chr6_2:29626682-29626701 | Msa0914760:CDS | 40.0% | |
| ATGAGTTATCTGGAGATCCA+GGG | - | chr6_2:29626683-29626702 | Msa0914760:CDS | 40.0% | |
| ATGTGTTCTAGCCGAAACTA+AGG | - | chr6_2:29626744-29626763 | Msa0914760:intron | 40.0% | |
| TGTGTTCTAGCCGAAACTAA+GGG | - | chr6_2:29626745-29626764 | Msa0914760:intron | 40.0% | |
| TTCTCTATTGCTCCAAGTGT+TGG | - | chr6_2:29626794-29626813 | Msa0914760:intron | 40.0% | |
| TCTCTATTGCTCCAAGTGTT+GGG | - | chr6_2:29626795-29626814 | Msa0914760:intron | 40.0% | |
| TCAAATGAAGACCAAGGTTC+AGG | - | chr6_2:29626856-29626875 | Msa0914760:CDS | 40.0% | |
| ! | TGCTGTTGATTACGACCATT+TGG | - | chr6_2:29626946-29626965 | Msa0914760:CDS | 40.0% |
| GTTGATTACGACCATTTGGT+TGG | - | chr6_2:29626950-29626969 | Msa0914760:CDS | 40.0% | |
| !!! | GTGTGGTTTTATGGTTGTTG+AGG | - | chr6_2:29627019-29627038 | Msa0914760:CDS | 40.0% |
| !! | GACATCATTGGTGTTATGAC+TGG | - | chr6_2:29627063-29627082 | Msa0914760:CDS | 40.0% |
| CAACTCGATCACAATCATCT+TGG | + | chr6_2:29627130-29627149 | None:intergenic | 40.0% | |
| !! | TGGATTGGTTATTTGTCGTG+TGG | - | chr6_2:29627241-29627260 | Msa0914760:CDS | 40.0% |
| AAGGTTGAGTGTGCATTGTT+TGG | - | chr6_2:29627281-29627300 | Msa0914760:intron | 40.0% | |
| ! | TGACCTTTTGCTAAAGCTCA+TGG | - | chr6_2:29627313-29627332 | Msa0914760:intron | 40.0% |
| ! | GACCTTTTGCTAAAGCTCAT+GGG | - | chr6_2:29627314-29627333 | Msa0914760:intron | 40.0% |
| ! | TTCCCATGAGCTTTAGCAAA+AGG | + | chr6_2:29627319-29627338 | None:intergenic | 40.0% |
| AAACCACTACGAAGGATTGA+CGG | + | chr6_2:29627435-29627454 | None:intergenic | 40.0% | |
| ! | TCAATCCTTCGTAGTGGTTT+TGG | - | chr6_2:29627435-29627454 | Msa0914760:CDS | 40.0% |
| ATTCACCAAAACCACTACGA+AGG | + | chr6_2:29627443-29627462 | None:intergenic | 40.0% | |
| TATCAACCCTGACATTGATG+AGG | - | chr6_2:29627525-29627544 | Msa0914760:intron | 40.0% | |
| TTGTGTAGGATTGATGTGCA+TGG | - | chr6_2:29627652-29627671 | Msa0914760:CDS | 40.0% | |
| ! | GTCGCTTGAAGAAGAGTTTT+TGG | - | chr6_2:29627723-29627742 | Msa0914760:intron | 40.0% |
| !!! | GAAGAAGAGTTTTTGGTTGC+TGG | - | chr6_2:29627730-29627749 | Msa0914760:intron | 40.0% |
| !!! | AGTTTTTGGTTGCTGGTCAT+AGG | - | chr6_2:29627737-29627756 | Msa0914760:intron | 40.0% |
| !!! | GTTTTTGGTTGCTGGTCATA+GGG | - | chr6_2:29627738-29627757 | Msa0914760:intron | 40.0% |
| !! | GTTGTTGGTGACATTGTTGA+TGG | - | chr6_2:29627805-29627824 | Msa0914760:CDS | 40.0% |
| !! | TGGTGACATTGTTGATGGTT+TGG | - | chr6_2:29627810-29627829 | Msa0914760:CDS | 40.0% |
| !! | CATTGTTGATGGTTTGGTTG+AGG | - | chr6_2:29627816-29627835 | Msa0914760:CDS | 40.0% |
| !! | TTGTTGATGGTTTGGTTGAG+GGG | - | chr6_2:29627818-29627837 | Msa0914760:CDS | 40.0% |
| AACACCTCTATGAAACCTAC+AGG | + | chr6_2:29627863-29627882 | None:intergenic | 40.0% | |
| !! | TTTGGTGCTTACTACTGCAA+GGG | - | chr6_2:29627892-29627911 | Msa0914760:CDS | 40.0% |
| ATGTGTTTCAGATGGTTCCT+AGG | - | chr6_2:29627926-29627945 | Msa0914760:CDS | 40.0% | |
| TATGAGGTGAAGATCTGTGT+CGG | - | chr6_2:29628030-29628049 | Msa0914760:intron | 40.0% | |
| ! | GGTGATATGCAGAATTTGCT+AGG | - | chr6_2:29628090-29628109 | Msa0914760:intron | 40.0% |
| !! | ACAGTGTAGTGATTTGGTGT+CGG | - | chr6_2:29628116-29628135 | Msa0914760:intron | 40.0% |
| GTTATGGATTTGTGTGTTGG+TGG | - | chr6_2:29628195-29628214 | Msa0914760:intron | 40.0% | |
| ATGTATAGGCCAAAAATGCC+GGG | - | chr6_2:29628236-29628255 | Msa0914760:CDS | 40.0% | |
| ! | AGGATAAAACCCGGCATTTT+TGG | + | chr6_2:29628248-29628267 | None:intergenic | 40.0% |
| AAGCTCATCAGGATAAAACC+CGG | + | chr6_2:29628257-29628276 | None:intergenic | 40.0% | |
| ! | TCCTCTTTGATGGTTCATAC+AGG | - | chr6_2:29628335-29628354 | Msa0914760:CDS | 40.0% |
| ! | CCTCTTTGATGGTTCATACA+GGG | - | chr6_2:29628336-29628355 | Msa0914760:CDS | 40.0% |
| ! | TTGATGGTTCATACAGGGTT+AGG | - | chr6_2:29628341-29628360 | Msa0914760:CDS | 40.0% |
| TTCTAGCCGAAACTAAGGGA+AGG | - | chr6_2:29626749-29626768 | Msa0914760:intron | 45.0% | |
| TCTAGCCGAAACTAAGGGAA+GGG | - | chr6_2:29626750-29626769 | Msa0914760:intron | 45.0% | |
| CGCGCACATAATCCATATTG+TGG | + | chr6_2:29626902-29626921 | None:intergenic | 45.0% | |
| GATTATGTGCGCGCAAGATT+GGG | - | chr6_2:29626909-29626928 | Msa0914760:CDS | 45.0% | |
| ATTATGTGCGCGCAAGATTG+GGG | - | chr6_2:29626910-29626929 | Msa0914760:CDS | 45.0% | |
| !! | GGTTTTATGGTTGTTGAGGC+TGG | - | chr6_2:29627023-29627042 | Msa0914760:CDS | 45.0% |
| !! | TGATCGAGTTGACTGATGAC+AGG | - | chr6_2:29627139-29627158 | Msa0914760:intron | 45.0% |
| CGTTCAGTTGTCTCATGGAT+TGG | - | chr6_2:29627226-29627245 | Msa0914760:CDS | 45.0% | |
| ! | GGCATTCAACACGTTCTAGA+GGG | + | chr6_2:29627494-29627513 | None:intergenic | 45.0% |
| TGGCATTCAACACGTTCTAG+AGG | + | chr6_2:29627495-29627514 | None:intergenic | 45.0% | |
| !! | AGGGTTGATAAGAATCCTGG+TGG | + | chr6_2:29627515-29627534 | None:intergenic | 45.0% |
| !! | GTCAGGGTTGATAAGAATCC+TGG | + | chr6_2:29627518-29627537 | None:intergenic | 45.0% |
| CGAATTCTTGGACCAATCAC+CGG | + | chr6_2:29627700-29627719 | None:intergenic | 45.0% | |
| !! | TGTTGATGGTTTGGTTGAGG+GGG | - | chr6_2:29627819-29627838 | Msa0914760:CDS | 45.0% |
| CAGTAGTAAGCACCAAAGTC+GGG | + | chr6_2:29627889-29627908 | None:intergenic | 45.0% | |
| GCAGTAGTAAGCACCAAAGT+CGG | + | chr6_2:29627890-29627909 | None:intergenic | 45.0% | |
| !! | CTTTGGTGCTTACTACTGCA+AGG | - | chr6_2:29627891-29627910 | Msa0914760:CDS | 45.0% |
| CGTGAAGCATGTGTTTCAGA+TGG | - | chr6_2:29627918-29627937 | Msa0914760:CDS | 45.0% | |
| TTCAGCTTCAGAAGCTCATC+AGG | + | chr6_2:29628268-29628287 | None:intergenic | 45.0% | |
| !! | TGATGAGCTTCTGAAGCTGA+AGG | - | chr6_2:29628267-29628286 | Msa0914760:CDS | 45.0% |
| !! | GATGAGCTTCTGAAGCTGAA+GGG | - | chr6_2:29628268-29628287 | Msa0914760:CDS | 45.0% |
| CCCTGTATGAACCATCAAAG+AGG | + | chr6_2:29628339-29628358 | None:intergenic | 45.0% | |
| TTCTAGCCGAAACTAAGGGA+AGG | - | chr6_2:29626749-29626768 | Msa0914760:intron | 45.0% | |
| TCTAGCCGAAACTAAGGGAA+GGG | - | chr6_2:29626750-29626769 | Msa0914760:intron | 45.0% | |
| CGCGCACATAATCCATATTG+TGG | + | chr6_2:29626902-29626921 | None:intergenic | 45.0% | |
| GATTATGTGCGCGCAAGATT+GGG | - | chr6_2:29626909-29626928 | Msa0914760:CDS | 45.0% | |
| ATTATGTGCGCGCAAGATTG+GGG | - | chr6_2:29626910-29626929 | Msa0914760:CDS | 45.0% | |
| !! | GGTTTTATGGTTGTTGAGGC+TGG | - | chr6_2:29627023-29627042 | Msa0914760:CDS | 45.0% |
| !! | TGATCGAGTTGACTGATGAC+AGG | - | chr6_2:29627139-29627158 | Msa0914760:intron | 45.0% |
| CGTTCAGTTGTCTCATGGAT+TGG | - | chr6_2:29627226-29627245 | Msa0914760:CDS | 45.0% | |
| ! | GGCATTCAACACGTTCTAGA+GGG | + | chr6_2:29627494-29627513 | None:intergenic | 45.0% |
| TGGCATTCAACACGTTCTAG+AGG | + | chr6_2:29627495-29627514 | None:intergenic | 45.0% | |
| !! | AGGGTTGATAAGAATCCTGG+TGG | + | chr6_2:29627515-29627534 | None:intergenic | 45.0% |
| !! | GTCAGGGTTGATAAGAATCC+TGG | + | chr6_2:29627518-29627537 | None:intergenic | 45.0% |
| CGAATTCTTGGACCAATCAC+CGG | + | chr6_2:29627700-29627719 | None:intergenic | 45.0% | |
| !! | TGTTGATGGTTTGGTTGAGG+GGG | - | chr6_2:29627819-29627838 | Msa0914760:CDS | 45.0% |
| CAGTAGTAAGCACCAAAGTC+GGG | + | chr6_2:29627889-29627908 | None:intergenic | 45.0% | |
| GCAGTAGTAAGCACCAAAGT+CGG | + | chr6_2:29627890-29627909 | None:intergenic | 45.0% | |
| !! | CTTTGGTGCTTACTACTGCA+AGG | - | chr6_2:29627891-29627910 | Msa0914760:CDS | 45.0% |
| CGTGAAGCATGTGTTTCAGA+TGG | - | chr6_2:29627918-29627937 | Msa0914760:CDS | 45.0% | |
| TTCAGCTTCAGAAGCTCATC+AGG | + | chr6_2:29628268-29628287 | None:intergenic | 45.0% | |
| !! | TGATGAGCTTCTGAAGCTGA+AGG | - | chr6_2:29628267-29628286 | Msa0914760:CDS | 45.0% |
| !! | GATGAGCTTCTGAAGCTGAA+GGG | - | chr6_2:29628268-29628287 | Msa0914760:CDS | 45.0% |
| CCCTGTATGAACCATCAAAG+AGG | + | chr6_2:29628339-29628358 | None:intergenic | 45.0% | |
| TTCAGCTGTTGTGCCTAGCA+AGG | - | chr6_2:29626419-29626438 | Msa0914760:CDS | 50.0% | |
| TTGTGCCTAGCAAGGACTCT+TGG | - | chr6_2:29626427-29626446 | Msa0914760:CDS | 50.0% | |
| AACCTCCAAGAGTCCTTGCT+AGG | + | chr6_2:29626435-29626454 | None:intergenic | 50.0% | |
| CAAGGACTCTTGGAGGTTGA+AGG | - | chr6_2:29626437-29626456 | Msa0914760:CDS | 50.0% | |
| GCTCAGGCTTCAGAAAGGTT+GGG | + | chr6_2:29626488-29626507 | None:intergenic | 50.0% | |
| TGCTCAGGCTTCAGAAAGGT+TGG | + | chr6_2:29626489-29626508 | None:intergenic | 50.0% | |
| !! | TCAAGTGAGTTGGTCTGCTC+AGG | + | chr6_2:29626504-29626523 | None:intergenic | 50.0% |
| GCAGACCAACTCACTTGAGA+TGG | - | chr6_2:29626506-29626525 | Msa0914760:CDS | 50.0% | |
| GAGCACCATCTCAAGTGAGT+TGG | + | chr6_2:29626514-29626533 | None:intergenic | 50.0% | |
| TTGCATGTATGGTGTAGCCC+TGG | + | chr6_2:29626703-29626722 | None:intergenic | 50.0% | |
| ACACCATACATGCAAGCGTG+AGG | - | chr6_2:29626708-29626727 | Msa0914760:CDS | 50.0% | |
| CTTCCTCACGCTTGCATGTA+TGG | + | chr6_2:29626714-29626733 | None:intergenic | 50.0% | |
| CTAGCCGAAACTAAGGGAAG+GGG | - | chr6_2:29626751-29626770 | Msa0914760:intron | 50.0% | |
| GCATCCCCTTCCCTTAGTTT+CGG | + | chr6_2:29626758-29626777 | None:intergenic | 50.0% | |
| GAACGGTATGACCCAACACT+TGG | + | chr6_2:29626809-29626828 | None:intergenic | 50.0% | |
| ACTCTCACTTGCCTGAACCT+TGG | + | chr6_2:29626870-29626889 | None:intergenic | 50.0% | |
| GGATTATGTGCGCGCAAGAT+TGG | - | chr6_2:29626908-29626927 | Msa0914760:CDS | 50.0% | |
| GCAAGATTGGGGACGTTTGT+GGG | - | chr6_2:29626921-29626940 | Msa0914760:CDS | 50.0% | |
| GACTGGGATTTCTGCTGAGA+AGG | - | chr6_2:29627080-29627099 | Msa0914760:CDS | 50.0% | |
| ! | CTGCTGAGAAGGAGTACGTT+CGG | - | chr6_2:29627091-29627110 | Msa0914760:CDS | 50.0% |
| ! | TGCTGAGAAGGAGTACGTTC+GGG | - | chr6_2:29627092-29627111 | Msa0914760:CDS | 50.0% |
| TGACCGTCAATCCTTCGTAG+TGG | - | chr6_2:29627429-29627448 | Msa0914760:CDS | 50.0% | |
| AGAACGTGTTGAATGCCACC+AGG | - | chr6_2:29627497-29627516 | Msa0914760:CDS | 50.0% | |
| TCAAGCGACGGTCGAATTCT+TGG | + | chr6_2:29627712-29627731 | None:intergenic | 50.0% | |
| TGCTGGTCATAGGGTGAACT+TGG | - | chr6_2:29627747-29627766 | Msa0914760:intron | 50.0% | |
| GTTTGGTTGAGGGGGATGAT+TGG | - | chr6_2:29627827-29627846 | Msa0914760:CDS | 50.0% | |
| ! | ATTGGTGGTATCCTGCCTGT+AGG | - | chr6_2:29627845-29627864 | Msa0914760:CDS | 50.0% |
| CCTCTATGAAACCTACAGGC+AGG | + | chr6_2:29627859-29627878 | None:intergenic | 50.0% | |
| CCTGCCTGTAGGTTTCATAG+AGG | - | chr6_2:29627856-29627875 | Msa0914760:CDS | 50.0% | |
| !! | AGAGGTGTTACACCCGACTT+TGG | - | chr6_2:29627874-29627893 | Msa0914760:CDS | 50.0% |
| ! | ATCTGTGTCGGCGATGGTTA+TGG | - | chr6_2:29628042-29628061 | Msa0914760:intron | 50.0% |
| ! | TCTGTGTCGGCGATGGTTAT+GGG | - | chr6_2:29628043-29628062 | Msa0914760:intron | 50.0% |
| GGTTCATACAGGGTTAGGAG+AGG | - | chr6_2:29628346-29628365 | Msa0914760:CDS | 50.0% | |
| TTCAGCTGTTGTGCCTAGCA+AGG | - | chr6_2:29626419-29626438 | Msa0914760:CDS | 50.0% | |
| TTGTGCCTAGCAAGGACTCT+TGG | - | chr6_2:29626427-29626446 | Msa0914760:CDS | 50.0% | |
| AACCTCCAAGAGTCCTTGCT+AGG | + | chr6_2:29626435-29626454 | None:intergenic | 50.0% | |
| CAAGGACTCTTGGAGGTTGA+AGG | - | chr6_2:29626437-29626456 | Msa0914760:CDS | 50.0% | |
| GCTCAGGCTTCAGAAAGGTT+GGG | + | chr6_2:29626488-29626507 | None:intergenic | 50.0% | |
| TGCTCAGGCTTCAGAAAGGT+TGG | + | chr6_2:29626489-29626508 | None:intergenic | 50.0% | |
| !! | TCAAGTGAGTTGGTCTGCTC+AGG | + | chr6_2:29626504-29626523 | None:intergenic | 50.0% |
| GCAGACCAACTCACTTGAGA+TGG | - | chr6_2:29626506-29626525 | Msa0914760:CDS | 50.0% | |
| GAGCACCATCTCAAGTGAGT+TGG | + | chr6_2:29626514-29626533 | None:intergenic | 50.0% | |
| TTGCATGTATGGTGTAGCCC+TGG | + | chr6_2:29626703-29626722 | None:intergenic | 50.0% | |
| ACACCATACATGCAAGCGTG+AGG | - | chr6_2:29626708-29626727 | Msa0914760:CDS | 50.0% | |
| CTTCCTCACGCTTGCATGTA+TGG | + | chr6_2:29626714-29626733 | None:intergenic | 50.0% | |
| CTAGCCGAAACTAAGGGAAG+GGG | - | chr6_2:29626751-29626770 | Msa0914760:intron | 50.0% | |
| GCATCCCCTTCCCTTAGTTT+CGG | + | chr6_2:29626758-29626777 | None:intergenic | 50.0% | |
| GAACGGTATGACCCAACACT+TGG | + | chr6_2:29626809-29626828 | None:intergenic | 50.0% | |
| ACTCTCACTTGCCTGAACCT+TGG | + | chr6_2:29626870-29626889 | None:intergenic | 50.0% | |
| GGATTATGTGCGCGCAAGAT+TGG | - | chr6_2:29626908-29626927 | Msa0914760:CDS | 50.0% | |
| GCAAGATTGGGGACGTTTGT+GGG | - | chr6_2:29626921-29626940 | Msa0914760:CDS | 50.0% | |
| GACTGGGATTTCTGCTGAGA+AGG | - | chr6_2:29627080-29627099 | Msa0914760:CDS | 50.0% | |
| ! | CTGCTGAGAAGGAGTACGTT+CGG | - | chr6_2:29627091-29627110 | Msa0914760:CDS | 50.0% |
| ! | TGCTGAGAAGGAGTACGTTC+GGG | - | chr6_2:29627092-29627111 | Msa0914760:CDS | 50.0% |
| TGACCGTCAATCCTTCGTAG+TGG | - | chr6_2:29627429-29627448 | Msa0914760:CDS | 50.0% | |
| AGAACGTGTTGAATGCCACC+AGG | - | chr6_2:29627497-29627516 | Msa0914760:CDS | 50.0% | |
| TCAAGCGACGGTCGAATTCT+TGG | + | chr6_2:29627712-29627731 | None:intergenic | 50.0% | |
| TGCTGGTCATAGGGTGAACT+TGG | - | chr6_2:29627747-29627766 | Msa0914760:intron | 50.0% | |
| GTTTGGTTGAGGGGGATGAT+TGG | - | chr6_2:29627827-29627846 | Msa0914760:CDS | 50.0% | |
| ! | ATTGGTGGTATCCTGCCTGT+AGG | - | chr6_2:29627845-29627864 | Msa0914760:CDS | 50.0% |
| CCTCTATGAAACCTACAGGC+AGG | + | chr6_2:29627859-29627878 | None:intergenic | 50.0% | |
| CCTGCCTGTAGGTTTCATAG+AGG | - | chr6_2:29627856-29627875 | Msa0914760:CDS | 50.0% | |
| !! | AGAGGTGTTACACCCGACTT+TGG | - | chr6_2:29627874-29627893 | Msa0914760:CDS | 50.0% |
| ! | ATCTGTGTCGGCGATGGTTA+TGG | - | chr6_2:29628042-29628061 | Msa0914760:intron | 50.0% |
| ! | TCTGTGTCGGCGATGGTTAT+GGG | - | chr6_2:29628043-29628062 | Msa0914760:intron | 50.0% |
| GGTTCATACAGGGTTAGGAG+AGG | - | chr6_2:29628346-29628365 | Msa0914760:CDS | 50.0% | |
| TGCCTAGCAAGGACTCTTGG+AGG | - | chr6_2:29626430-29626449 | Msa0914760:CDS | 55.0% | |
| TTGGAGGTTGAAGGTCCGAG+TGG | - | chr6_2:29626446-29626465 | Msa0914760:CDS | 55.0% | |
| AGGTCCGAGTGGCCAGAATT+TGG | - | chr6_2:29626457-29626476 | Msa0914760:CDS | 55.0% | |
| GGTCCGAGTGGCCAGAATTT+GGG | - | chr6_2:29626458-29626477 | Msa0914760:CDS | 55.0% | |
| CCTCCCAAATTCTGGCCACT+CGG | + | chr6_2:29626464-29626483 | None:intergenic | 55.0% | |
| GGTTGGGACCTCCCAAATTC+TGG | + | chr6_2:29626472-29626491 | None:intergenic | 55.0% | |
| GGTCTGCTCAGGCTTCAGAA+AGG | + | chr6_2:29626493-29626512 | None:intergenic | 55.0% | |
| CGCAAGATTGGGGACGTTTG+TGG | - | chr6_2:29626920-29626939 | Msa0914760:CDS | 55.0% | |
| ! | GAGAAGGAGTACGTTCGGGA+TGG | - | chr6_2:29627096-29627115 | Msa0914760:intron | 55.0% |
| GCACACTCAACCTTGCCACT+GGG | + | chr6_2:29627275-29627294 | None:intergenic | 55.0% | |
| TGCACACTCAACCTTGCCAC+TGG | + | chr6_2:29627276-29627295 | None:intergenic | 55.0% | |
| TTGGACCAATCACCGGCATC+GGG | + | chr6_2:29627693-29627712 | None:intergenic | 55.0% | |
| CTTGGACCAATCACCGGCAT+CGG | + | chr6_2:29627694-29627713 | None:intergenic | 55.0% | |
| TGGTTGAGGGGGATGATTGG+TGG | - | chr6_2:29627830-29627849 | Msa0914760:CDS | 55.0% | |
| ! | GTGAAGATCTGTGTCGGCGA+TGG | - | chr6_2:29628036-29628055 | Msa0914760:intron | 55.0% |
| !! | TGATTTGGTGTCGGCTGCCA+AGG | - | chr6_2:29628125-29628144 | Msa0914760:intron | 55.0% |
| GCTGCGAGTGTCCTCTTTGA+TGG | - | chr6_2:29628325-29628344 | Msa0914760:CDS | 55.0% | |
| TGCCTAGCAAGGACTCTTGG+AGG | - | chr6_2:29626430-29626449 | Msa0914760:CDS | 55.0% | |
| TTGGAGGTTGAAGGTCCGAG+TGG | - | chr6_2:29626446-29626465 | Msa0914760:CDS | 55.0% | |
| AGGTCCGAGTGGCCAGAATT+TGG | - | chr6_2:29626457-29626476 | Msa0914760:CDS | 55.0% | |
| GGTCCGAGTGGCCAGAATTT+GGG | - | chr6_2:29626458-29626477 | Msa0914760:CDS | 55.0% | |
| CCTCCCAAATTCTGGCCACT+CGG | + | chr6_2:29626464-29626483 | None:intergenic | 55.0% | |
| GGTTGGGACCTCCCAAATTC+TGG | + | chr6_2:29626472-29626491 | None:intergenic | 55.0% | |
| GGTCTGCTCAGGCTTCAGAA+AGG | + | chr6_2:29626493-29626512 | None:intergenic | 55.0% | |
| CGCAAGATTGGGGACGTTTG+TGG | - | chr6_2:29626920-29626939 | Msa0914760:CDS | 55.0% | |
| ! | GAGAAGGAGTACGTTCGGGA+TGG | - | chr6_2:29627096-29627115 | Msa0914760:intron | 55.0% |
| GCACACTCAACCTTGCCACT+GGG | + | chr6_2:29627275-29627294 | None:intergenic | 55.0% | |
| TGCACACTCAACCTTGCCAC+TGG | + | chr6_2:29627276-29627295 | None:intergenic | 55.0% | |
| TTGGACCAATCACCGGCATC+GGG | + | chr6_2:29627693-29627712 | None:intergenic | 55.0% | |
| CTTGGACCAATCACCGGCAT+CGG | + | chr6_2:29627694-29627713 | None:intergenic | 55.0% | |
| TGGTTGAGGGGGATGATTGG+TGG | - | chr6_2:29627830-29627849 | Msa0914760:CDS | 55.0% | |
| ! | GTGAAGATCTGTGTCGGCGA+TGG | - | chr6_2:29628036-29628055 | Msa0914760:intron | 55.0% |
| !! | TGATTTGGTGTCGGCTGCCA+AGG | - | chr6_2:29628125-29628144 | Msa0914760:intron | 55.0% |
| GCTGCGAGTGTCCTCTTTGA+TGG | - | chr6_2:29628325-29628344 | Msa0914760:CDS | 55.0% | |
| CCGAGTGGCCAGAATTTGGG+AGG | - | chr6_2:29626461-29626480 | Msa0914760:CDS | 60.0% | |
| GGAGTACGTTCGGGATGGCA+AGG | - | chr6_2:29627101-29627120 | Msa0914760:intron | 60.0% | |
| CGTGTGGTTGTGTTGCCCAG+TGG | - | chr6_2:29627257-29627276 | Msa0914760:intron | 60.0% | |
| GGTTGTGTTGCCCAGTGGCA+AGG | - | chr6_2:29627262-29627281 | Msa0914760:intron | 60.0% | |
| TGAGCAAACAGCCCCGATGC+CGG | - | chr6_2:29627678-29627697 | Msa0914760:CDS | 60.0% | |
| TGGACCAATCACCGGCATCG+GGG | + | chr6_2:29627692-29627711 | None:intergenic | 60.0% | |
| CCGAGTGGCCAGAATTTGGG+AGG | - | chr6_2:29626461-29626480 | Msa0914760:CDS | 60.0% | |
| GGAGTACGTTCGGGATGGCA+AGG | - | chr6_2:29627101-29627120 | Msa0914760:intron | 60.0% | |
| CGTGTGGTTGTGTTGCCCAG+TGG | - | chr6_2:29627257-29627276 | Msa0914760:intron | 60.0% | |
| GGTTGTGTTGCCCAGTGGCA+AGG | - | chr6_2:29627262-29627281 | Msa0914760:intron | 60.0% | |
| TGAGCAAACAGCCCCGATGC+CGG | - | chr6_2:29627678-29627697 | Msa0914760:CDS | 60.0% | |
| TGGACCAATCACCGGCATCG+GGG | + | chr6_2:29627692-29627711 | None:intergenic | 60.0% | |
| ACAGCCCCGATGCCGGTGAT+TGG | - | chr6_2:29627685-29627704 | Msa0914760:CDS | 65.0% | |
| ACAGCCCCGATGCCGGTGAT+TGG | - | chr6_2:29627685-29627704 | Msa0914760:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 29626396 | 29628378 | 29626396 | ID=Msa0914760;Name=Msa0914760 |
| chr6_2 | mRNA | 29626396 | 29628378 | 29626396 | ID=Msa0914760-mRNA-1;Parent=Msa0914760;Name=Msa0914760-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|8|0|388 |
| chr6_2 | exon | 29628229 | 29628378 | 29628229 | ID=Msa0914760-mRNA-1:exon:5373;Parent=Msa0914760-mRNA-1 |
| chr6_2 | exon | 29627803 | 29628019 | 29627803 | ID=Msa0914760-mRNA-1:exon:5372;Parent=Msa0914760-mRNA-1 |
| chr6_2 | exon | 29627652 | 29627710 | 29627652 | ID=Msa0914760-mRNA-1:exon:5371;Parent=Msa0914760-mRNA-1 |
| chr6_2 | exon | 29627410 | 29627541 | 29627410 | ID=Msa0914760-mRNA-1:exon:5370;Parent=Msa0914760-mRNA-1 |
| chr6_2 | exon | 29627208 | 29627275 | 29627208 | ID=Msa0914760-mRNA-1:exon:5369;Parent=Msa0914760-mRNA-1 |
| chr6_2 | exon | 29626827 | 29627114 | 29626827 | ID=Msa0914760-mRNA-1:exon:5368;Parent=Msa0914760-mRNA-1 |
| chr6_2 | exon | 29626628 | 29626745 | 29626628 | ID=Msa0914760-mRNA-1:exon:5367;Parent=Msa0914760-mRNA-1 |
| chr6_2 | exon | 29626396 | 29626530 | 29626396 | ID=Msa0914760-mRNA-1:exon:5366;Parent=Msa0914760-mRNA-1 |
| chr6_2 | CDS | 29628229 | 29628378 | 29628229 | ID=Msa0914760-mRNA-1:cds;Parent=Msa0914760-mRNA-1 |
| chr6_2 | CDS | 29627803 | 29628019 | 29627803 | ID=Msa0914760-mRNA-1:cds;Parent=Msa0914760-mRNA-1 |
| chr6_2 | CDS | 29627652 | 29627710 | 29627652 | ID=Msa0914760-mRNA-1:cds;Parent=Msa0914760-mRNA-1 |
| chr6_2 | CDS | 29627410 | 29627541 | 29627410 | ID=Msa0914760-mRNA-1:cds;Parent=Msa0914760-mRNA-1 |
| chr6_2 | CDS | 29627208 | 29627275 | 29627208 | ID=Msa0914760-mRNA-1:cds;Parent=Msa0914760-mRNA-1 |
| chr6_2 | CDS | 29626827 | 29627114 | 29626827 | ID=Msa0914760-mRNA-1:cds;Parent=Msa0914760-mRNA-1 |
| chr6_2 | CDS | 29626628 | 29626745 | 29626628 | ID=Msa0914760-mRNA-1:cds;Parent=Msa0914760-mRNA-1 |
| chr6_2 | CDS | 29626396 | 29626530 | 29626396 | ID=Msa0914760-mRNA-1:cds;Parent=Msa0914760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
