Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158570 | XP_013449494.1 | 98.406 | 502 | 8 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1007 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158570 | sp|Q84XA3|IMDH_VIGUN | 81.275 | 502 | 94 | 0 | 1 | 502 | 1 | 502 | 0.0 | 846 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158570 | G7KZG9 | 98.406 | 502 | 8 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1007 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa1158570 | 0.815993 | 6.952212e-52 | -8.615850e-47 |
| Msa0029630 | Msa1158570 | 0.810804 | 9.605306e-51 | -8.615850e-47 |
| Msa0608320 | Msa1158570 | 0.809536 | 1.802592e-50 | -8.615850e-47 |
| Msa0615710 | Msa1158570 | 0.814215 | 1.725754e-51 | -8.615850e-47 |
| Msa0689230 | Msa1158570 | 0.802288 | 6.023875e-49 | -8.615850e-47 |
| Msa0698830 | Msa1158570 | 0.826912 | 2.091201e-54 | -8.615850e-47 |
| Msa0784200 | Msa1158570 | 0.807098 | 5.966544e-50 | -8.615850e-47 |
| Msa0818310 | Msa1158570 | 0.823605 | 1.265615e-53 | -8.615850e-47 |
| Msa0125450 | Msa1158570 | 0.821270 | 4.413417e-53 | -8.615850e-47 |
| Msa0125540 | Msa1158570 | 0.836860 | 7.304940e-57 | -8.615850e-47 |
| Msa0140820 | Msa1158570 | 0.800838 | 1.194241e-48 | -8.615850e-47 |
| Msa0169610 | Msa1158570 | 0.817181 | 3.767292e-52 | -8.615850e-47 |
| Msa0196690 | Msa1158570 | 0.815273 | 1.005987e-51 | -8.615850e-47 |
| Msa0226540 | Msa1158570 | 0.814962 | 1.179422e-51 | -8.615850e-47 |
| Msa0229230 | Msa1158570 | 0.838473 | 2.815877e-57 | -8.615850e-47 |
| Msa0229760 | Msa1158570 | 0.815008 | 1.151675e-51 | -8.615850e-47 |
| Msa0231980 | Msa1158570 | 0.803980 | 2.690424e-49 | -8.615850e-47 |
| Msa0369450 | Msa1158570 | 0.832654 | 8.358381e-56 | -8.615850e-47 |
| Msa0376300 | Msa1158570 | 0.809249 | 2.077359e-50 | -8.615850e-47 |
| Msa0376310 | Msa1158570 | 0.800387 | 1.475811e-48 | -8.615850e-47 |
| Msa0380300 | Msa1158570 | 0.828311 | 9.648193e-55 | -8.615850e-47 |
| Msa0428150 | Msa1158570 | 0.808196 | 3.487698e-50 | -8.615850e-47 |
| Msa1081930 | Msa1158570 | 0.814500 | 1.493019e-51 | -8.615850e-47 |
| Msa0255090 | Msa1158570 | 0.819984 | 8.714930e-53 | -8.615850e-47 |
| Msa0259380 | Msa1158570 | 0.815240 | 1.022907e-51 | -8.615850e-47 |
| Msa0280610 | Msa1158570 | 0.816471 | 5.437338e-52 | -8.615850e-47 |
| Msa0294160 | Msa1158570 | 0.809693 | 1.668013e-50 | -8.615850e-47 |
| Msa0310030 | Msa1158570 | 0.809719 | 1.646867e-50 | -8.615850e-47 |
| Msa0315170 | Msa1158570 | 0.823568 | 1.291644e-53 | -8.615850e-47 |
| Msa1118840 | Msa1158570 | 0.833308 | 5.745035e-56 | -8.615850e-47 |
| Msa1126830 | Msa1158570 | 0.808183 | 3.509314e-50 | -8.615850e-47 |
| Msa1128600 | Msa1158570 | 0.825566 | 4.370277e-54 | -8.615850e-47 |
| Msa1130980 | Msa1158570 | 0.851316 | 9.606288e-61 | -8.615850e-47 |
| Msa1158570 | Msa1165940 | 0.846557 | 2.016016e-59 | -8.615850e-47 |
| Msa1158570 | Msa1244600 | 0.801124 | 1.043787e-48 | -8.615850e-47 |
| Msa1158570 | Msa1367590 | 0.827186 | 1.797688e-54 | -8.615850e-47 |
| Msa1158570 | Msa1381350 | 0.802693 | 4.969242e-49 | -8.615850e-47 |
| Msa1158570 | Msa1418340 | 0.850001 | 2.251075e-60 | -8.615850e-47 |
| Msa0518390 | Msa1158570 | 0.812103 | 5.017228e-51 | -8.615850e-47 |
| Msa0518450 | Msa1158570 | 0.811034 | 8.568024e-51 | -8.615850e-47 |
| Msa0524500 | Msa1158570 | 0.829582 | 4.750004e-55 | -8.615850e-47 |
| Msa0556060 | Msa1158570 | 0.805905 | 1.065082e-49 | -8.615850e-47 |
| Msa0581110 | Msa1158570 | 0.810629 | 1.048022e-50 | -8.615850e-47 |
| Msa0858770 | Msa1158570 | 0.815883 | 7.359637e-52 | -8.615850e-47 |
| Msa0898040 | Msa1158570 | 0.811688 | 6.177737e-51 | -8.615850e-47 |
| Msa0924470 | Msa1158570 | 0.803854 | 2.857221e-49 | -8.615850e-47 |
| Msa0945110 | Msa1158570 | 0.804826 | 1.792984e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158570 | MtrunA17_Chr7g0253221 | 98.406 | 502 | 8 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1007 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158570 | AT1G16350.1 | 72.200 | 500 | 133 | 3 | 8 | 502 | 4 | 502 | 0.0 | 718 |
| Msa1158570 | AT1G79470.1 | 69.522 | 502 | 144 | 5 | 8 | 502 | 4 | 503 | 0.0 | 699 |
Find 188 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGAGCTCTTCTAAGTTT+TGG | 0.178577 | 7_4:+47983905 | Msa1158570:three_prime_UTR |
| AAATTCTATCCATTAGATTT+TGG | 0.179300 | 7_4:+47984046 | Msa1158570:three_prime_UTR |
| AAATCTTAATTCAGAACTTT+GGG | 0.253028 | 7_4:-47983968 | None:intergenic |
| TATCCTGAGTTGGATGTTAT+TGG | 0.267664 | 7_4:+47981136 | Msa1158570:CDS |
| CTACACGGCTCATTATTTAT+TGG | 0.274892 | 7_4:-47983849 | None:intergenic |
| CTTACTGCTTGCATGGTATA+TGG | 0.277853 | 7_4:-47982663 | None:intergenic |
| CGTGAGAGTTTCCGATTATA+TGG | 0.304251 | 7_4:+47980769 | Msa1158570:CDS |
| TAAGGAGAGGTTAGAGCATT+TGG | 0.304384 | 7_4:+47981024 | Msa1158570:CDS |
| TTACAAAAGAGCACTTCTAT+TGG | 0.319858 | 7_4:+47983887 | Msa1158570:three_prime_UTR |
| CACAGAACCCTTGTCTTTAA+CGG | 0.321519 | 7_4:-47982628 | None:intergenic |
| TAAATCTTAATTCAGAACTT+TGG | 0.323260 | 7_4:-47983969 | None:intergenic |
| GATTCTGTTACTAAAATAAA+AGG | 0.335337 | 7_4:-47980677 | None:intergenic |
| AGGGAATTCTATTTATCAAT+TGG | 0.349090 | 7_4:+47981087 | Msa1158570:CDS |
| GGATGAAGAGGTGGTGGATT+TGG | 0.350172 | 7_4:+47980886 | Msa1158570:CDS |
| GGCGGATGGAGAGTGGATGG+TGG | 0.364010 | 7_4:+47980973 | Msa1158570:CDS |
| CTCAGGAAGTTTGCGCGGTT+GGG | 0.364915 | 7_4:+47981254 | Msa1158570:CDS |
| CTAAATGAACCAAAATCTAA+TGG | 0.369321 | 7_4:-47984055 | None:intergenic |
| GAGGAAATGAAGAAGAGAAA+TGG | 0.373725 | 7_4:+47980842 | Msa1158570:CDS |
| AATTCTACTGGAAAATTTCT+CGG | 0.374014 | 7_4:+47980704 | Msa1158570:CDS |
| CACGCCCTTGTCATTTCGAT+TGG | 0.374644 | 7_4:-47980750 | None:intergenic |
| TTGAGAGTTGGTATGGGATC+TGG | 0.375174 | 7_4:+47981217 | Msa1158570:CDS |
| CCCATGACCTTCTTAGATCC+AGG | 0.375991 | 7_4:+47982727 | Msa1158570:CDS |
| TGGTGACCGGAGGATCGGTT+GGG | 0.377809 | 7_4:+47980951 | Msa1158570:CDS |
| TCCTGGAGCTTATGTATATC+AGG | 0.378291 | 7_4:+47982167 | Msa1158570:CDS |
| CACTGTCTCCGAATCCTCTA+TGG | 0.382113 | 7_4:+47980481 | Msa1158570:CDS |
| TGGTGTGAATGCTGTGGTTT+TGG | 0.382670 | 7_4:+47981054 | Msa1158570:CDS |
| TTCTTAGATCCAGGGTGTTA+AGG | 0.386012 | 7_4:+47982736 | Msa1158570:CDS |
| CTTCTCTCCGACAACCACTA+TGG | 0.388746 | 7_4:+47980268 | Msa1158570:exon |
| GTCATTTCGATTGGACCAAT+TGG | 0.388934 | 7_4:-47980741 | None:intergenic |
| TTGATTCAAGCTGGTGTTGA+TGG | 0.407424 | 7_4:+47981193 | Msa1158570:CDS |
| CGATTATATGGAGGCTCCAC+CGG | 0.408688 | 7_4:+47980781 | Msa1158570:CDS |
| GCTTCTGCCATGGCCGCACT+TGG | 0.408941 | 7_4:+47980503 | Msa1158570:CDS |
| GATCCTCCGGTCACCAACTT+TGG | 0.414172 | 7_4:-47980944 | None:intergenic |
| TGATGGGTTGAGAGTTGGTA+TGG | 0.414297 | 7_4:+47981210 | Msa1158570:CDS |
| GGAGGATCGGTTGGGGCGGA+TGG | 0.417599 | 7_4:+47980959 | Msa1158570:CDS |
| CGGTGGAGCCTCCATATAAT+CGG | 0.423861 | 7_4:-47980780 | None:intergenic |
| ACTCAGGAAGTTTGCGCGGT+TGG | 0.425370 | 7_4:+47981253 | Msa1158570:CDS |
| GATGGTGGCATCTCAAACTC+TGG | 0.425465 | 7_4:+47982069 | Msa1158570:CDS |
| AAAATTGCCCAAGGGGTTGT+TGG | 0.425681 | 7_4:+47982603 | Msa1158570:CDS |
| AAATGGAAATGTTGTTGCTT+TGG | 0.427126 | 7_4:+47980859 | Msa1158570:CDS |
| ACAGAATCTGGTAATTCTAC+TGG | 0.429318 | 7_4:+47980692 | Msa1158570:CDS |
| GCTGGTAGTCTTGAGGCTCC+TGG | 0.429575 | 7_4:+47982150 | Msa1158570:CDS |
| CAGGTTGAAGGAGGAATTCA+TGG | 0.430215 | 7_4:+47983786 | Msa1158570:CDS |
| GGCAGAAGCCATAGAGGATT+CGG | 0.431522 | 7_4:-47980489 | None:intergenic |
| TCTGCCATGGCCGCACTTGG+CGG | 0.433855 | 7_4:+47980506 | Msa1158570:CDS |
| GGTGACTCAATGCATGGAAA+TGG | 0.441521 | 7_4:-47980099 | None:intergenic |
| GAAGTTTGCGCGGTTGGGCG+TGG | 0.443788 | 7_4:+47981259 | Msa1158570:CDS |
| TCCCTTCGTCGCTTCTCCTA+TGG | 0.443897 | 7_4:+47980457 | Msa1158570:CDS |
| TGCCTTGAGTCATAGCTTCA+AGG | 0.443952 | 7_4:-47982545 | None:intergenic |
| GCGGATGGAGAGTGGATGGT+GGG | 0.445959 | 7_4:+47980974 | Msa1158570:CDS |
| ATTGTAAAGGCTTTATCGTT+GGG | 0.447314 | 7_4:+47982096 | Msa1158570:CDS |
| TTGGTGACCGGAGGATCGGT+TGG | 0.451158 | 7_4:+47980950 | Msa1158570:CDS |
| AACGGCTCCAACAACCCCTT+GGG | 0.454984 | 7_4:-47982610 | None:intergenic |
| ACAGGGAACTGCTGTTTACA+AGG | 0.456183 | 7_4:+47982005 | Msa1158570:intron |
| ATTCCGTTAGAATATAAACT+TGG | 0.457739 | 7_4:+47984004 | Msa1158570:three_prime_UTR |
| TGTGCCTATCCTCTCTGAAC+CGG | 0.459765 | 7_4:+47980601 | Msa1158570:CDS |
| GATGATTAAGTATGTGAAGA+AGG | 0.460326 | 7_4:+47981111 | Msa1158570:CDS |
| GGATGGAGAGTGGATGGTGG+GGG | 0.460745 | 7_4:+47980976 | Msa1158570:CDS |
| CGGATGGAGAGTGGATGGTG+GGG | 0.464751 | 7_4:+47980975 | Msa1158570:CDS |
| ATCGTAGGTGTAAGAGAAAC+CGG | 0.465899 | 7_4:-47980345 | None:intergenic |
| GGGAGCATCGACTGTTATGA+TGG | 0.465926 | 7_4:+47982116 | Msa1158570:CDS |
| ATCCGCCCCAACCGATCCTC+CGG | 0.469251 | 7_4:-47980957 | None:intergenic |
| CACGTCAGGCGGCTATTGTC+CGG | 0.469649 | 7_4:+47980561 | Msa1158570:CDS |
| GAGAGAAGAGAGAGTGAAGT+AGG | 0.471389 | 7_4:-47980253 | None:intergenic |
| AGCGACGAAGGGAGTTGAAA+GGG | 0.472950 | 7_4:-47980447 | None:intergenic |
| TTTGTCCACCAGGTTCGTAC+TGG | 0.477076 | 7_4:+47983756 | Msa1158570:intron |
| TAACGGCTCCAACAACCCCT+TGG | 0.477673 | 7_4:-47982611 | None:intergenic |
| TGACGTGAAGGAGTGTTGTT+AGG | 0.479927 | 7_4:-47980545 | None:intergenic |
| GAGGAGGTTGAGAGGGTGAG+AGG | 0.484489 | 7_4:+47980917 | Msa1158570:CDS |
| TATTGTAAAGGCTTTATCGT+TGG | 0.489367 | 7_4:+47982095 | Msa1158570:CDS |
| GGGGATGTTACGACTGAGAC+GGG | 0.496253 | 7_4:-47980426 | None:intergenic |
| GATTATATGGAGGCTCCACC+GGG | 0.497696 | 7_4:+47980782 | Msa1158570:CDS |
| TCATCCATTGCTTATAAAAG+TGG | 0.502800 | 7_4:+47982030 | Msa1158570:CDS |
| CACGGCGGGACTTGGCAGTC+CGG | 0.503608 | 7_4:-47980580 | None:intergenic |
| GGTGTTGATGGGTTGAGAGT+TGG | 0.507985 | 7_4:+47981205 | Msa1158570:CDS |
| ATCCTCTATGGCTTCTGCCA+TGG | 0.508811 | 7_4:+47980493 | Msa1158570:CDS |
| GACAAAAGAGGAGGTTGAGA+GGG | 0.509210 | 7_4:+47980910 | Msa1158570:CDS |
| TGAAGGAGGAATTCATGGAC+TGG | 0.511160 | 7_4:+47983791 | Msa1158570:CDS |
| CGGTTGGGGCGGATGGAGAG+TGG | 0.513980 | 7_4:+47980966 | Msa1158570:CDS |
| AAACTCTGGTCATATTGTAA+AGG | 0.515767 | 7_4:+47982083 | Msa1158570:CDS |
| TTAGAGCATTTGGTGAAAGC+TGG | 0.518134 | 7_4:+47981034 | Msa1158570:CDS |
| CACCCAAGTTTATATTCTAA+CGG | 0.518664 | 7_4:-47984007 | None:intergenic |
| CATATACCATGCAAGCAGTA+AGG | 0.518987 | 7_4:+47982664 | Msa1158570:CDS |
| TGGGGCGGATGGAGAGTGGA+TGG | 0.519730 | 7_4:+47980970 | Msa1158570:CDS |
| GGCTATCCAAAGTTGGTGAC+CGG | 0.520319 | 7_4:+47980938 | Msa1158570:CDS |
| TAACAACACTCCTTCACGTC+AGG | 0.521517 | 7_4:+47980547 | Msa1158570:CDS |
| GCCGAAGGAGAGACGAAAAC+CGG | 0.522856 | 7_4:-47980620 | None:intergenic |
| TGGGACGAGGGAACAAGATA+AGG | 0.524651 | 7_4:+47981006 | Msa1158570:CDS |
| ACTGGAGCAGCACAGGTTGA+AGG | 0.526386 | 7_4:+47983774 | Msa1158570:CDS |
| TGGTTCTATTTGTACTACTC+AGG | 0.528310 | 7_4:+47981237 | Msa1158570:CDS |
| ATGATGGGAAGCTTCTTAGC+TGG | 0.528805 | 7_4:+47982132 | Msa1158570:CDS |
| GGTGACCGGAGGATCGGTTG+GGG | 0.529662 | 7_4:+47980952 | Msa1158570:CDS |
| ACCTTGCCTTACTGCTTGCA+TGG | 0.532254 | 7_4:-47982670 | None:intergenic |
| ACCTGATATACATAAGCTCC+AGG | 0.537758 | 7_4:-47982168 | None:intergenic |
| AATCTTAATTCAGAACTTTG+GGG | 0.539170 | 7_4:-47983967 | None:intergenic |
| AAGCGACGAAGGGAGTTGAA+AGG | 0.540703 | 7_4:-47980448 | None:intergenic |
| GTCCATAGGAGAAGCGACGA+AGG | 0.542663 | 7_4:-47980459 | None:intergenic |
| CCTGAGTTGGATGTTATTGG+TGG | 0.543528 | 7_4:+47981139 | Msa1158570:CDS |
| CCATGACCTTCTTAGATCCA+GGG | 0.546981 | 7_4:+47982728 | Msa1158570:CDS |
| TGACAAAAGAGGAGGTTGAG+AGG | 0.547501 | 7_4:+47980909 | Msa1158570:CDS |
| GCTGAGAATTTGATTCAAGC+TGG | 0.548614 | 7_4:+47981184 | Msa1158570:CDS |
| CTTCTTAGCTGGTAGTCTTG+AGG | 0.548615 | 7_4:+47982143 | Msa1158570:CDS |
| GGTGAAGGATGAAGAGGTGG+TGG | 0.551586 | 7_4:+47980880 | Msa1158570:CDS |
| GGTTCGTACTGGAGCAGCAC+AGG | 0.558244 | 7_4:+47983767 | Msa1158570:intron |
| TTAACACCCTGGATCTAAGA+AGG | 0.559140 | 7_4:-47982734 | None:intergenic |
| GGTGGATTTGGTGACAAAAG+AGG | 0.559564 | 7_4:+47980898 | Msa1158570:CDS |
| TTCCGTTAGAATATAAACTT+GGG | 0.560645 | 7_4:+47984005 | Msa1158570:three_prime_UTR |
| GATTCGGAGACAGTGTCCAT+AGG | 0.561445 | 7_4:-47980473 | None:intergenic |
| CCCTGGATCTAAGAAGGTCA+TGG | 0.562255 | 7_4:-47982728 | None:intergenic |
| TAACCGTCTTCGATTGGCGG+AGG | 0.564397 | 7_4:-47980299 | None:intergenic |
| ACTCCTCCGCCAATCGAAGA+CGG | 0.564726 | 7_4:+47980296 | Msa1158570:CDS |
| TGCTTTGGTGAAGGATGAAG+AGG | 0.564999 | 7_4:+47980874 | Msa1158570:CDS |
| TGATTCAAGCTGGTGTTGAT+GGG | 0.565423 | 7_4:+47981194 | Msa1158570:CDS |
| GTGAAATCCATAGTGGTTGT+CGG | 0.566033 | 7_4:-47980275 | None:intergenic |
| GAAGAAGGTTTATCCTGAGT+TGG | 0.566603 | 7_4:+47981126 | Msa1158570:CDS |
| ATGGGCAGACTGCAGAGAGT+TGG | 0.568777 | 7_4:-47982709 | None:intergenic |
| ATGAACTGAACATGATGACT+TGG | 0.571886 | 7_4:+47980073 | Msa1158570:five_prime_UTR |
| TATTCTAACGGAATTACAGT+GGG | 0.573417 | 7_4:-47983995 | None:intergenic |
| GACCGGAGGATCGGTTGGGG+CGG | 0.573840 | 7_4:+47980955 | Msa1158570:CDS |
| GATGGGTTGAGAGTTGGTAT+GGG | 0.574553 | 7_4:+47981211 | Msa1158570:CDS |
| GTGTTGAAATGTGTTTGTAG+TGG | 0.575042 | 7_4:-47980183 | None:intergenic |
| GGAGTTCCTGTCATTGCTGA+TGG | 0.577457 | 7_4:+47982051 | Msa1158570:CDS |
| GAGTTCCACGGTAGAGAACC+CGG | 0.577584 | 7_4:-47980800 | None:intergenic |
| TGACTCAAGGCAGTGATCAA+AGG | 0.583071 | 7_4:+47982556 | Msa1158570:CDS |
| GGTGAGAGGCTATCCAAAGT+TGG | 0.583805 | 7_4:+47980931 | Msa1158570:CDS |
| AAAGTTGGTGACCGGAGGAT+CGG | 0.584022 | 7_4:+47980946 | Msa1158570:CDS |
| TGTTGGAGCCGTTAAAGACA+AGG | 0.584144 | 7_4:+47982620 | Msa1158570:CDS |
| GCGTAACCGTCTTCGATTGG+CGG | 0.588487 | 7_4:-47980302 | None:intergenic |
| AGAGAGGATAGGCACACGGC+GGG | 0.589663 | 7_4:-47980594 | None:intergenic |
| TTTCCTCTTCAATCTTCGCA+AGG | 0.590215 | 7_4:-47980826 | None:intergenic |
| TCCCTTGAAGCTATGACTCA+AGG | 0.591282 | 7_4:+47982543 | Msa1158570:CDS |
| ATGCCACCATCAGCAATGAC+AGG | 0.596778 | 7_4:-47982057 | None:intergenic |
| CCTGGATCTAAGAAGGTCAT+GGG | 0.598715 | 7_4:-47982727 | None:intergenic |
| AAATGTTGTTGCTTTGGTGA+AGG | 0.599445 | 7_4:+47980865 | Msa1158570:CDS |
| GTTCCTGTCATTGCTGATGG+TGG | 0.600022 | 7_4:+47982054 | Msa1158570:CDS |
| GCAAAGCTTAAAATTGCCCA+AGG | 0.602956 | 7_4:+47982594 | Msa1158570:CDS |
| CAACACTCCTTCACGTCAGG+CGG | 0.604618 | 7_4:+47980550 | Msa1158570:CDS |
| TGACCTTGCGAAGATTGAAG+AGG | 0.605198 | 7_4:+47980823 | Msa1158570:CDS |
| CAAAGCTTAAAATTGCCCAA+GGG | 0.607807 | 7_4:+47982595 | Msa1158570:CDS |
| TACCTCTAGCCTTAACACCC+TGG | 0.607961 | 7_4:-47982745 | None:intergenic |
| CTGTAGTTTATAATAGAACA+TGG | 0.608139 | 7_4:+47983932 | Msa1158570:three_prime_UTR |
| TGTAGTGAGGGAGGAAGATG+AGG | 0.611469 | 7_4:-47980370 | None:intergenic |
| TCCATAGGAGAAGCGACGAA+GGG | 0.611484 | 7_4:-47980458 | None:intergenic |
| ATCCAGGGTGTTAAGGCTAG+AGG | 0.611715 | 7_4:+47982743 | Msa1158570:CDS |
| CGGCGAAGTCGATGTAGTGA+GGG | 0.612539 | 7_4:-47980382 | None:intergenic |
| GCGGCGAAGTCGATGTAGTG+AGG | 0.613902 | 7_4:-47980383 | None:intergenic |
| TACGACTGAGACGGGAGGAG+AGG | 0.614422 | 7_4:-47980418 | None:intergenic |
| GGCAGTGATCAAAGGTACCT+CGG | 0.616960 | 7_4:+47982564 | Msa1158570:CDS |
| GGAGCATCGACTGTTATGAT+GGG | 0.618284 | 7_4:+47982117 | Msa1158570:CDS |
| GCCTTGAGTCATAGCTTCAA+GGG | 0.619235 | 7_4:-47982544 | None:intergenic |
| GCGACGAAGGGAGTTGAAAG+GGG | 0.619315 | 7_4:-47980446 | None:intergenic |
| AACAGCGATACCGCCAAGTG+CGG | 0.624789 | 7_4:-47980516 | None:intergenic |
| TACTACTCAGGAAGTTTGCG+CGG | 0.625490 | 7_4:+47981249 | Msa1158570:CDS |
| GTTGGAGCCGTTAAAGACAA+GGG | 0.626283 | 7_4:+47982621 | Msa1158570:CDS |
| GAGGAAGATGAGGTCATCGT+AGG | 0.626293 | 7_4:-47980360 | None:intergenic |
| CGGAGGAGTGAAATCCATAG+TGG | 0.626435 | 7_4:-47980282 | None:intergenic |
| TTGGTCCAATCGAAATGACA+AGG | 0.627219 | 7_4:+47980745 | Msa1158570:CDS |
| AAAGCTTAAAATTGCCCAAG+GGG | 0.628138 | 7_4:+47982596 | Msa1158570:CDS |
| CTCCACCGGGTTCTCTACCG+TGG | 0.633134 | 7_4:+47980795 | Msa1158570:CDS |
| TATCCAAAGTTGGTGACCGG+AGG | 0.637764 | 7_4:+47980941 | Msa1158570:CDS |
| TTTGGTGAAGGATGAAGAGG+TGG | 0.638094 | 7_4:+47980877 | Msa1158570:CDS |
| GGCCATGGCAGAAGCCATAG+AGG | 0.638566 | 7_4:-47980495 | None:intergenic |
| CGAAGTCGATGTAGTGAGGG+AGG | 0.643395 | 7_4:-47980379 | None:intergenic |
| CCACCAATAACATCCAACTC+AGG | 0.643921 | 7_4:-47981139 | None:intergenic |
| GAGAGTTTCCGATTATATGG+AGG | 0.644523 | 7_4:+47980772 | Msa1158570:CDS |
| CGACGAAGGGAGTTGAAAGG+GGG | 0.648483 | 7_4:-47980445 | None:intergenic |
| ATATTCTAACGGAATTACAG+TGG | 0.649021 | 7_4:-47983996 | None:intergenic |
| CGAGGGAACAAGATAAGGAG+AGG | 0.649099 | 7_4:+47981011 | Msa1158570:CDS |
| ACCATGCAAGCAGTAAGGCA+AGG | 0.650696 | 7_4:+47982669 | Msa1158570:CDS |
| TCAGAATCGATTACTGCCGA+AGG | 0.651499 | 7_4:-47980635 | None:intergenic |
| GCCAATCGAAGACGGTTACG+CGG | 0.652065 | 7_4:+47980304 | Msa1158570:CDS |
| GAAAGCTGGTGTGAATGCTG+TGG | 0.657777 | 7_4:+47981048 | Msa1158570:CDS |
| TAATTGCAACAGCTTCTACA+CGG | 0.659841 | 7_4:-47983864 | None:intergenic |
| GGAGCAGCACAGGTTGAAGG+AGG | 0.660899 | 7_4:+47983777 | Msa1158570:CDS |
| CTGAGTTGGATGTTATTGGT+GGG | 0.662829 | 7_4:+47981140 | Msa1158570:CDS |
| TTCGCAAGGTCAGAGTTCCA+CGG | 0.665644 | 7_4:-47980812 | None:intergenic |
| AAAACCGGTTCAGAGAGGAT+AGG | 0.681418 | 7_4:-47980605 | None:intergenic |
| GGAGAGGTCGACTTCATCAG+CGG | 0.694285 | 7_4:-47980402 | None:intergenic |
| TGGTCCAATCGAAATGACAA+GGG | 0.694909 | 7_4:+47980746 | Msa1158570:CDS |
| AGACGAAAACCGGTTCAGAG+AGG | 0.695318 | 7_4:-47980610 | None:intergenic |
| GGATTTGGTGACAAAAGAGG+AGG | 0.695676 | 7_4:+47980901 | Msa1158570:CDS |
| GATGTTACGACTGAGACGGG+AGG | 0.697292 | 7_4:-47980423 | None:intergenic |
| GTTCAGAGAGGATAGGCACA+CGG | 0.728183 | 7_4:-47980598 | None:intergenic |
| AATCGAAGACGGTTACGCGG+CGG | 0.728337 | 7_4:+47980307 | Msa1158570:CDS |
| TAAGCTTTGCTGTATCACCG+AGG | 0.732907 | 7_4:-47982581 | None:intergenic |
| CAGAGAGGATAGGCACACGG+CGG | 0.750161 | 7_4:-47980595 | None:intergenic |
| TAGTTTATAATAGAACATGG+TGG | 0.764803 | 7_4:+47983935 | Msa1158570:three_prime_UTR |
| TTCCACGGTAGAGAACCCGG+TGG | 0.809206 | 7_4:-47980797 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAACTTATTTTAATCATTT+TGG | - | chr7_4:47980123-47980142 | None:intergenic | 10.0% |
| !!! | ATATCACTATAATATATTTT+AGG | - | chr7_4:47983275-47983294 | None:intergenic | 10.0% |
| !! | TTAAGTAAAAAAAAATAGTA+AGG | - | chr7_4:47984093-47984112 | None:intergenic | 10.0% |
| !! | AAGAAAATATTGAAGATAAA+AGG | + | chr7_4:47981838-47981857 | Msa1158570:intron | 15.0% |
| !! | AGAAAATATTGAAGATAAAA+GGG | + | chr7_4:47981839-47981858 | Msa1158570:intron | 15.0% |
| !!! | ACCTTTTTAAAATAGTATTT+CGG | + | chr7_4:47982282-47982301 | Msa1158570:intron | 15.0% |
| !!! | CAAATATTCTAAAAATCCAA+CGG | + | chr7_4:47980152-47980171 | Msa1158570:five_prime_UTR | 20.0% |
| !! | GATTCTGTTACTAAAATAAA+AGG | - | chr7_4:47980680-47980699 | None:intergenic | 20.0% |
| !!! | TTTATTTTAGTAACAGAATC+TGG | + | chr7_4:47980680-47980699 | Msa1158570:CDS | 20.0% |
| !!! | ACTTATTTTATCTTATCTAC+TGG | - | chr7_4:47981574-47981593 | None:intergenic | 20.0% |
| !! | TTTCACTAAACTATTAGAAT+AGG | + | chr7_4:47981627-47981646 | Msa1158570:intron | 20.0% |
| !!! | ACCGAAATACTATTTTAAAA+AGG | - | chr7_4:47982286-47982305 | None:intergenic | 20.0% |
| !! | TATTTATGAAACTAAATGAC+AGG | - | chr7_4:47982444-47982463 | None:intergenic | 20.0% |
| !! | TTTCATTTACACAATCAAAA+TGG | + | chr7_4:47982831-47982850 | Msa1158570:intron | 20.0% |
| !!! | TTCTTGTTTAAAGAATGAAA+TGG | - | chr7_4:47982993-47983012 | None:intergenic | 20.0% |
| !!! | TTTTTTACAAAATAGATAGG+AGG | - | chr7_4:47983101-47983120 | None:intergenic | 20.0% |
| !!! | GTCTTTTTTACAAAATAGAT+AGG | - | chr7_4:47983104-47983123 | None:intergenic | 20.0% |
| !!! | TAAAAAAGACAAAAGTATAG+TGG | + | chr7_4:47983114-47983133 | Msa1158570:intron | 20.0% |
| !! | TAAAAAAAATCCAAGTAGTT+GGG | + | chr7_4:47983351-47983370 | Msa1158570:intron | 20.0% |
| !! | CTTGAATTGAAAAACAAAAT+AGG | + | chr7_4:47983386-47983405 | Msa1158570:intron | 20.0% |
| !! | AAAACAAAGATAATCATTTG+AGG | - | chr7_4:47983579-47983598 | None:intergenic | 20.0% |
| !! | TACAAAAAATTATTGCTAGT+GGG | - | chr7_4:47983622-47983641 | None:intergenic | 20.0% |
| !! | AATTGAGTAACATTACATAT+TGG | - | chr7_4:47983725-47983744 | None:intergenic | 20.0% |
| !! | AAATCTTAATTCAGAACTTT+GGG | - | chr7_4:47983971-47983990 | None:intergenic | 20.0% |
| !! | TAAATCTTAATTCAGAACTT+TGG | - | chr7_4:47983972-47983991 | None:intergenic | 20.0% |
| !!! | AAATTCTATCCATTAGATTT+TGG | + | chr7_4:47984046-47984065 | Msa1158570:three_prime_UTR | 20.0% |
| !! | AAAAAAAAATAGTAAGGTCT+TGG | - | chr7_4:47984087-47984106 | None:intergenic | 20.0% |
| ! | AATTCTACTGGAAAATTTCT+CGG | + | chr7_4:47980704-47980723 | Msa1158570:CDS | 25.0% |
| ! | AGGGAATTCTATTTATCAAT+TGG | + | chr7_4:47981087-47981106 | Msa1158570:CDS | 25.0% |
| ! | GTAAGTTGTTTAACCAAATA+TGG | - | chr7_4:47981402-47981421 | None:intergenic | 25.0% |
| !! | CTTCAATATTTTCTTGAGAA+TGG | - | chr7_4:47981833-47981852 | None:intergenic | 25.0% |
| ! | AGAAAATCATCACTATCTAA+AGG | - | chr7_4:47981876-47981895 | None:intergenic | 25.0% |
| ! | AGATGATTAAATTCTTACTG+AGG | + | chr7_4:47982328-47982347 | Msa1158570:intron | 25.0% |
| !!! | TATTTTTTTTTGCACCAGAA+TGG | + | chr7_4:47982489-47982508 | Msa1158570:intron | 25.0% |
| ! | GCAAGAAATAAATAAGAACT+CGG | - | chr7_4:47982778-47982797 | None:intergenic | 25.0% |
| !! | TTCTTATTTATTTCTTGCTC+TGG | + | chr7_4:47982780-47982799 | Msa1158570:intron | 25.0% |
| ! | AAATGAAACAGCTACAATAA+CGG | - | chr7_4:47982819-47982838 | None:intergenic | 25.0% |
| ! | ATACTTATGGATATAAAAGC+CGG | - | chr7_4:47982897-47982916 | None:intergenic | 25.0% |
| ! | AAAGTTAGGAAACTAGTAAT+AGG | + | chr7_4:47982927-47982946 | Msa1158570:intron | 25.0% |
| !! | TGTCATTTGAACATACATTA+GGG | + | chr7_4:47983143-47983162 | Msa1158570:intron | 25.0% |
| ! | CTAAAAAAAATCCAAGTAGT+TGG | + | chr7_4:47983350-47983369 | Msa1158570:intron | 25.0% |
| ! | CTACAAAAAATTATTGCTAG+TGG | - | chr7_4:47983623-47983642 | None:intergenic | 25.0% |
| ! | AAAAGATTATGAGACCAAAT+TGG | - | chr7_4:47983666-47983685 | None:intergenic | 25.0% |
| !!! | ATAATCTTTTGAAGACACAA+TGG | + | chr7_4:47983676-47983695 | Msa1158570:intron | 25.0% |
| ! | CTGTAGTTTATAATAGAACA+TGG | + | chr7_4:47983932-47983951 | Msa1158570:three_prime_UTR | 25.0% |
| ! | TAGTTTATAATAGAACATGG+TGG | + | chr7_4:47983935-47983954 | Msa1158570:three_prime_UTR | 25.0% |
| ! | AATCTTAATTCAGAACTTTG+GGG | - | chr7_4:47983970-47983989 | None:intergenic | 25.0% |
| ! | ATTCCGTTAGAATATAAACT+TGG | + | chr7_4:47984004-47984023 | Msa1158570:three_prime_UTR | 25.0% |
| ! | TTCCGTTAGAATATAAACTT+GGG | + | chr7_4:47984005-47984024 | Msa1158570:three_prime_UTR | 25.0% |
| ! | CTAAATGAACCAAAATCTAA+TGG | - | chr7_4:47984058-47984077 | None:intergenic | 25.0% |
| !! | TGAAGTAGGTTTTTCAACTA+CGG | - | chr7_4:47980242-47980261 | None:intergenic | 30.0% |
| ! | AAATGGAAATGTTGTTGCTT+TGG | + | chr7_4:47980859-47980878 | Msa1158570:CDS | 30.0% |
| GATGATTAAGTATGTGAAGA+AGG | + | chr7_4:47981111-47981130 | Msa1158570:CDS | 30.0% | |
| !!! | TTTTAACAGTTTGTTGCATC+TGG | + | chr7_4:47981324-47981343 | Msa1158570:intron | 30.0% |
| AAACATATGCATGCATAACA+GGG | - | chr7_4:47981474-47981493 | None:intergenic | 30.0% | |
| TGTTATGCATGCATATGTTT+GGG | + | chr7_4:47981474-47981493 | Msa1158570:intron | 30.0% | |
| AACAACATATGACATCTAAG+TGG | - | chr7_4:47981513-47981532 | None:intergenic | 30.0% | |
| TTTCATAAGTTGTCCCAAAT+AGG | + | chr7_4:47981532-47981551 | Msa1158570:intron | 30.0% | |
| AAAGCTCAAAATATCACGTA+CGG | - | chr7_4:47981610-47981629 | None:intergenic | 30.0% | |
| GTAATATTGTGCCTAAAATG+CGG | + | chr7_4:47981677-47981696 | Msa1158570:intron | 30.0% | |
| AGACTCAATATTAAGAGTCA+GGG | - | chr7_4:47981980-47981999 | None:intergenic | 30.0% | |
| TAATATTGAGTCTGTTTGAC+AGG | + | chr7_4:47981987-47982006 | Msa1158570:intron | 30.0% | |
| AATATTGAGTCTGTTTGACA+GGG | + | chr7_4:47981988-47982007 | Msa1158570:intron | 30.0% | |
| TCATCCATTGCTTATAAAAG+TGG | + | chr7_4:47982030-47982049 | Msa1158570:CDS | 30.0% | |
| !! | AACTCCACTTTTATAAGCAA+TGG | - | chr7_4:47982037-47982056 | None:intergenic | 30.0% |
| AAACTCTGGTCATATTGTAA+AGG | + | chr7_4:47982083-47982102 | Msa1158570:CDS | 30.0% | |
| ! | TATTGTAAAGGCTTTATCGT+TGG | + | chr7_4:47982095-47982114 | Msa1158570:CDS | 30.0% |
| ! | ATTGTAAAGGCTTTATCGTT+GGG | + | chr7_4:47982096-47982115 | Msa1158570:CDS | 30.0% |
| ACAATTCACAAGATTTCATC+AGG | - | chr7_4:47982201-47982220 | None:intergenic | 30.0% | |
| TGATGAAATCTTGTGAATTG+TGG | + | chr7_4:47982200-47982219 | Msa1158570:intron | 30.0% | |
| AAGCTTCAAATCTTACGAAA+AGG | - | chr7_4:47982229-47982248 | None:intergenic | 30.0% | |
| GTATTTCGGTTAGAAATTGA+TGG | + | chr7_4:47982296-47982315 | Msa1158570:intron | 30.0% | |
| !!! | ACTGAGGTGTTGTTTTTATT+TGG | + | chr7_4:47982344-47982363 | Msa1158570:intron | 30.0% |
| !!! | GTTTTTATTTGGTGTGGATA+TGG | + | chr7_4:47982355-47982374 | Msa1158570:intron | 30.0% |
| AAACTAAATGACAGGAAACA+AGG | - | chr7_4:47982436-47982455 | None:intergenic | 30.0% | |
| ! | TGTCAAAAAGTATAGAGGAA+TGG | + | chr7_4:47982518-47982537 | Msa1158570:CDS | 30.0% |
| ! | GTCAAAAAGTATAGAGGAAT+GGG | + | chr7_4:47982519-47982538 | Msa1158570:CDS | 30.0% |
| !!! | ATACACATAGCTTTTTTCAC+CGG | + | chr7_4:47982875-47982894 | Msa1158570:intron | 30.0% |
| !! | GTGTCATTTGAACATACATT+AGG | + | chr7_4:47983142-47983161 | Msa1158570:intron | 30.0% |
| GTCATTTGAACATACATTAG+GGG | + | chr7_4:47983144-47983163 | Msa1158570:intron | 30.0% | |
| ATTTCTCCAACAAATAGAAG+TGG | + | chr7_4:47983178-47983197 | Msa1158570:intron | 30.0% | |
| ! | ATTGATTTAATCCTTTCCAG+TGG | - | chr7_4:47983326-47983345 | None:intergenic | 30.0% |
| GTATTCACACAAAACACTTA+TGG | - | chr7_4:47983488-47983507 | None:intergenic | 30.0% | |
| !! | TTTTTCGAACAATAGCAGTT+TGG | + | chr7_4:47983595-47983614 | Msa1158570:intron | 30.0% |
| ATGTCATCTAAGAACCAATT+TGG | + | chr7_4:47983649-47983668 | Msa1158570:intron | 30.0% | |
| TGAGTAACATTACATATTGG+TGG | - | chr7_4:47983722-47983741 | None:intergenic | 30.0% | |
| !! | TTACAAAAGAGCACTTCTAT+TGG | + | chr7_4:47983887-47983906 | Msa1158570:three_prime_UTR | 30.0% |
| TATTCTAACGGAATTACAGT+GGG | - | chr7_4:47983998-47984017 | None:intergenic | 30.0% | |
| ATATTCTAACGGAATTACAG+TGG | - | chr7_4:47983999-47984018 | None:intergenic | 30.0% | |
| CACCCAAGTTTATATTCTAA+CGG | - | chr7_4:47984010-47984029 | None:intergenic | 30.0% | |
| ATGAACTGAACATGATGACT+TGG | + | chr7_4:47980073-47980092 | Msa1158570:five_prime_UTR | 35.0% | |
| GTGTTGAAATGTGTTTGTAG+TGG | - | chr7_4:47980186-47980205 | None:intergenic | 35.0% | |
| ACAGAATCTGGTAATTCTAC+TGG | + | chr7_4:47980692-47980711 | Msa1158570:CDS | 35.0% | |
| !!! | GTTTTGTTTCGAAGACCAAT+TGG | + | chr7_4:47980726-47980745 | Msa1158570:CDS | 35.0% |
| GAGGAAATGAAGAAGAGAAA+TGG | + | chr7_4:47980842-47980861 | Msa1158570:CDS | 35.0% | |
| !! | AAATGTTGTTGCTTTGGTGA+AGG | + | chr7_4:47980865-47980884 | Msa1158570:CDS | 35.0% |
| !!! | TGGTTTTGGATAGTTCTCAA+GGG | + | chr7_4:47981068-47981087 | Msa1158570:CDS | 35.0% |
| ! | TATCCTGAGTTGGATGTTAT+TGG | + | chr7_4:47981136-47981155 | Msa1158570:CDS | 35.0% |
| ! | TGGTTCTATTTGTACTACTC+AGG | + | chr7_4:47981237-47981256 | Msa1158570:CDS | 35.0% |
| ACCAAATATGGTCACAATCA+AGG | - | chr7_4:47981390-47981409 | None:intergenic | 35.0% | |
| CAAACATATGCATGCATAAC+AGG | - | chr7_4:47981475-47981494 | None:intergenic | 35.0% | |
| CTGTTATGCATGCATATGTT+TGG | + | chr7_4:47981473-47981492 | Msa1158570:intron | 35.0% | |
| ATCTACTGGCATCAACATTT+GGG | - | chr7_4:47981560-47981579 | None:intergenic | 35.0% | |
| TATCTACTGGCATCAACATT+TGG | - | chr7_4:47981561-47981580 | None:intergenic | 35.0% | |
| TTGTAGCAACAAAGGATCAT+TGG | - | chr7_4:47981747-47981766 | None:intergenic | 35.0% | |
| ATTGAAGATAAAAGGGTCAG+AGG | + | chr7_4:47981846-47981865 | Msa1158570:intron | 35.0% | |
| CAAATTCCAGATATTGCTCA+AGG | + | chr7_4:47981954-47981973 | Msa1158570:intron | 35.0% | |
| CAGACTCAATATTAAGAGTC+AGG | - | chr7_4:47981981-47982000 | None:intergenic | 35.0% | |
| ! | CACAAGATTTCATCAGGTTT+TGG | - | chr7_4:47982195-47982214 | None:intergenic | 35.0% |
| !!! | GGTGTTGTTTTTATTTGGTG+TGG | + | chr7_4:47982349-47982368 | Msa1158570:intron | 35.0% |
| TACATTGCTTACTCTTCCTT+TGG | + | chr7_4:47982404-47982423 | Msa1158570:intron | 35.0% | |
| !! | CTCTATACTTTTTGACACGT+TGG | - | chr7_4:47982515-47982534 | None:intergenic | 35.0% |
| ! | CAACGTGTCAAAAAGTATAG+AGG | + | chr7_4:47982513-47982532 | Msa1158570:CDS | 35.0% |
| CAAAGCTTAAAATTGCCCAA+GGG | + | chr7_4:47982595-47982614 | Msa1158570:CDS | 35.0% | |
| AAAGCTTAAAATTGCCCAAG+GGG | + | chr7_4:47982596-47982615 | Msa1158570:CDS | 35.0% | |
| !! | AGGCAAGGTTTTCAAGATAT+TGG | + | chr7_4:47982684-47982703 | Msa1158570:CDS | 35.0% |
| ATATCCATAAGTATTACCCG+TGG | + | chr7_4:47982903-47982922 | Msa1158570:intron | 35.0% | |
| ! | TTTTCCACGGGTAATACTTA+TGG | - | chr7_4:47982910-47982929 | None:intergenic | 35.0% |
| ! | TAGTTTCCTAACTTTTCCAC+GGG | - | chr7_4:47982922-47982941 | None:intergenic | 35.0% |
| ! | CTAGTTTCCTAACTTTTCCA+CGG | - | chr7_4:47982923-47982942 | None:intergenic | 35.0% |
| ATGAAATGGCTCAGAAAACA+GGG | - | chr7_4:47982979-47982998 | None:intergenic | 35.0% | |
| AATGAAATGGCTCAGAAAAC+AGG | - | chr7_4:47982980-47982999 | None:intergenic | 35.0% | |
| AGGTAAGTGTAATTGAAGAC+AGG | - | chr7_4:47983081-47983100 | None:intergenic | 35.0% | |
| GTAACAAGATTTCTTTCCAC+TGG | + | chr7_4:47983307-47983326 | Msa1158570:intron | 35.0% | |
| AAGATTTCTTTCCACTGGAA+AGG | + | chr7_4:47983312-47983331 | Msa1158570:intron | 35.0% | |
| CACTGTGATGTAATTGTTGA+TGG | + | chr7_4:47983415-47983434 | Msa1158570:intron | 35.0% | |
| !! | ATGTAATTGTTGATGGTCCA+AGG | + | chr7_4:47983422-47983441 | Msa1158570:intron | 35.0% |
| !! | TGTAATTGTTGATGGTCCAA+GGG | + | chr7_4:47983423-47983442 | Msa1158570:intron | 35.0% |
| TTCATATAAACTCCCCAGAT+TGG | + | chr7_4:47983523-47983542 | Msa1158570:intron | 35.0% | |
| ! | ATCTTTTGCATACCAATCTG+GGG | - | chr7_4:47983538-47983557 | None:intergenic | 35.0% |
| ! | GATCTTTTGCATACCAATCT+GGG | - | chr7_4:47983539-47983558 | None:intergenic | 35.0% |
| ! | TGATCTTTTGCATACCAATC+TGG | - | chr7_4:47983540-47983559 | None:intergenic | 35.0% |
| GTAACATTACATATTGGTGG+AGG | - | chr7_4:47983719-47983738 | None:intergenic | 35.0% | |
| CTACACGGCTCATTATTTAT+TGG | - | chr7_4:47983852-47983871 | None:intergenic | 35.0% | |
| TAATTGCAACAGCTTCTACA+CGG | - | chr7_4:47983867-47983886 | None:intergenic | 35.0% | |
| ! | ATTGGAGCTCTTCTAAGTTT+TGG | + | chr7_4:47983905-47983924 | Msa1158570:three_prime_UTR | 35.0% |
| ! | TTGGAGCTCTTCTAAGTTTT+GGG | + | chr7_4:47983906-47983925 | Msa1158570:three_prime_UTR | 35.0% |
| !! | CATTTTGGTGACTCAATGCA+TGG | - | chr7_4:47980108-47980127 | None:intergenic | 40.0% |
| !! | AGTAGGTTTTTCAACTACGG+TGG | - | chr7_4:47980239-47980258 | None:intergenic | 40.0% |
| GTGAAATCCATAGTGGTTGT+CGG | - | chr7_4:47980278-47980297 | None:intergenic | 40.0% | |
| ATCGTAGGTGTAAGAGAAAC+CGG | - | chr7_4:47980348-47980367 | None:intergenic | 40.0% | |
| GTCATTTCGATTGGACCAAT+TGG | - | chr7_4:47980744-47980763 | None:intergenic | 40.0% | |
| TTGGTCCAATCGAAATGACA+AGG | + | chr7_4:47980745-47980764 | Msa1158570:CDS | 40.0% | |
| TGGTCCAATCGAAATGACAA+GGG | + | chr7_4:47980746-47980765 | Msa1158570:CDS | 40.0% | |
| CGTGAGAGTTTCCGATTATA+TGG | + | chr7_4:47980769-47980788 | Msa1158570:CDS | 40.0% | |
| GAGAGTTTCCGATTATATGG+AGG | + | chr7_4:47980772-47980791 | Msa1158570:CDS | 40.0% | |
| TTTCCTCTTCAATCTTCGCA+AGG | - | chr7_4:47980829-47980848 | None:intergenic | 40.0% | |
| ! | TAAGGAGAGGTTAGAGCATT+TGG | + | chr7_4:47981024-47981043 | Msa1158570:CDS | 40.0% |
| ! | TTAGAGCATTTGGTGAAAGC+TGG | + | chr7_4:47981034-47981053 | Msa1158570:CDS | 40.0% |
| !!! | GTGGTTTTGGATAGTTCTCA+AGG | + | chr7_4:47981067-47981086 | Msa1158570:CDS | 40.0% |
| GAAGAAGGTTTATCCTGAGT+TGG | + | chr7_4:47981126-47981145 | Msa1158570:CDS | 40.0% | |
| ! | CTGAGTTGGATGTTATTGGT+GGG | + | chr7_4:47981140-47981159 | Msa1158570:CDS | 40.0% |
| GCTGAGAATTTGATTCAAGC+TGG | + | chr7_4:47981184-47981203 | Msa1158570:CDS | 40.0% | |
| ! | TTGATTCAAGCTGGTGTTGA+TGG | + | chr7_4:47981193-47981212 | Msa1158570:CDS | 40.0% |
| !! | TGATTCAAGCTGGTGTTGAT+GGG | + | chr7_4:47981194-47981213 | Msa1158570:CDS | 40.0% |
| !! | TGGCTTTGGATTGTTGTTGT+AGG | + | chr7_4:47981344-47981363 | Msa1158570:intron | 40.0% |
| GCCTTGATTGTGACCATATT+TGG | + | chr7_4:47981386-47981405 | Msa1158570:intron | 40.0% | |
| CAACATTTGGGAGCCTATTT+GGG | - | chr7_4:47981548-47981567 | None:intergenic | 40.0% | |
| TCAACATTTGGGAGCCTATT+TGG | - | chr7_4:47981549-47981568 | None:intergenic | 40.0% | |
| ! | AATATCACGTACGGCTTGTT+TGG | - | chr7_4:47981601-47981620 | None:intergenic | 40.0% |
| ACGGCTTATTGTAGCAACAA+AGG | - | chr7_4:47981755-47981774 | None:intergenic | 40.0% | |
| TTTGTTGCTACAATAAGCCG+TGG | + | chr7_4:47981754-47981773 | Msa1158570:intron | 40.0% | |
| TTGTTGCTACAATAAGCCGT+GGG | + | chr7_4:47981755-47981774 | Msa1158570:intron | 40.0% | |
| ATTGTTCCACTCCAATGTCA+GGG | - | chr7_4:47981795-47981814 | None:intergenic | 40.0% | |
| TCCTGGAGCTTATGTATATC+AGG | + | chr7_4:47982167-47982186 | Msa1158570:CDS | 40.0% | |
| ACCTGATATACATAAGCTCC+AGG | - | chr7_4:47982171-47982190 | None:intergenic | 40.0% | |
| GGAAACAAGGAAAACACCAA+AGG | - | chr7_4:47982423-47982442 | None:intergenic | 40.0% | |
| GCAAAGCTTAAAATTGCCCA+AGG | + | chr7_4:47982594-47982613 | Msa1158570:CDS | 40.0% | |
| CACAGAACCCTTGTCTTTAA+CGG | - | chr7_4:47982631-47982650 | None:intergenic | 40.0% | |
| CTTACTGCTTGCATGGTATA+TGG | - | chr7_4:47982666-47982685 | None:intergenic | 40.0% | |
| CATATACCATGCAAGCAGTA+AGG | + | chr7_4:47982664-47982683 | Msa1158570:CDS | 40.0% | |
| TTAACACCCTGGATCTAAGA+AGG | - | chr7_4:47982737-47982756 | None:intergenic | 40.0% | |
| ! | TTCTTAGATCCAGGGTGTTA+AGG | + | chr7_4:47982736-47982755 | Msa1158570:CDS | 40.0% |
| GTATTACCCGTGGAAAAGTT+AGG | + | chr7_4:47982913-47982932 | Msa1158570:intron | 40.0% | |
| CACTGACCACTTCTATTTGT+TGG | - | chr7_4:47983187-47983206 | None:intergenic | 40.0% | |
| ! | TGTCTTTTAAGCACGACTGA+GGG | + | chr7_4:47983236-47983255 | Msa1158570:intron | 40.0% |
| GTTTACAGAACCCAACTACT+TGG | - | chr7_4:47983364-47983383 | None:intergenic | 40.0% | |
| !! | GTAATTGTTGATGGTCCAAG+GGG | + | chr7_4:47983424-47983443 | Msa1158570:intron | 40.0% |
| !! | TAATTGTTGATGGTCCAAGG+GGG | + | chr7_4:47983425-47983444 | Msa1158570:intron | 40.0% |
| ! | TGGAGCTCTTCTAAGTTTTG+GGG | + | chr7_4:47983907-47983926 | Msa1158570:three_prime_UTR | 40.0% |
| GGTGACTCAATGCATGGAAA+TGG | - | chr7_4:47980102-47980121 | None:intergenic | 45.0% | |
| !!! | TGTAGTGGATTTTGAGCCGT+TGG | - | chr7_4:47980171-47980190 | None:intergenic | 45.0% |
| !! | AGGTTTTTCAACTACGGTGG+CGG | - | chr7_4:47980236-47980255 | None:intergenic | 45.0% |
| GAGAGAAGAGAGAGTGAAGT+AGG | - | chr7_4:47980256-47980275 | None:intergenic | 45.0% | |
| !! | TGACGTGAAGGAGTGTTGTT+AGG | - | chr7_4:47980548-47980567 | None:intergenic | 45.0% |
| TAACAACACTCCTTCACGTC+AGG | + | chr7_4:47980547-47980566 | Msa1158570:CDS | 45.0% | |
| ! | AAAACCGGTTCAGAGAGGAT+AGG | - | chr7_4:47980608-47980627 | None:intergenic | 45.0% |
| TCAGAATCGATTACTGCCGA+AGG | - | chr7_4:47980638-47980657 | None:intergenic | 45.0% | |
| TGACCTTGCGAAGATTGAAG+AGG | + | chr7_4:47980823-47980842 | Msa1158570:CDS | 45.0% | |
| TGCTTTGGTGAAGGATGAAG+AGG | + | chr7_4:47980874-47980893 | Msa1158570:CDS | 45.0% | |
| TTTGGTGAAGGATGAAGAGG+TGG | + | chr7_4:47980877-47980896 | Msa1158570:CDS | 45.0% | |
| !! | GGTGGATTTGGTGACAAAAG+AGG | + | chr7_4:47980898-47980917 | Msa1158570:CDS | 45.0% |
| !! | GGATTTGGTGACAAAAGAGG+AGG | + | chr7_4:47980901-47980920 | Msa1158570:CDS | 45.0% |
| TGACAAAAGAGGAGGTTGAG+AGG | + | chr7_4:47980909-47980928 | Msa1158570:CDS | 45.0% | |
| GACAAAAGAGGAGGTTGAGA+GGG | + | chr7_4:47980910-47980929 | Msa1158570:CDS | 45.0% | |
| ! | TGGTGTGAATGCTGTGGTTT+TGG | + | chr7_4:47981054-47981073 | Msa1158570:CDS | 45.0% |
| CCACCAATAACATCCAACTC+AGG | - | chr7_4:47981142-47981161 | None:intergenic | 45.0% | |
| ! | CCTGAGTTGGATGTTATTGG+TGG | + | chr7_4:47981139-47981158 | Msa1158570:CDS | 45.0% |
| !! | TGATGGGTTGAGAGTTGGTA+TGG | + | chr7_4:47981210-47981229 | Msa1158570:CDS | 45.0% |
| !! | GATGGGTTGAGAGTTGGTAT+GGG | + | chr7_4:47981211-47981230 | Msa1158570:CDS | 45.0% |
| !! | TTGAGAGTTGGTATGGGATC+TGG | + | chr7_4:47981217-47981236 | Msa1158570:CDS | 45.0% |
| TACTACTCAGGAAGTTTGCG+CGG | + | chr7_4:47981249-47981268 | Msa1158570:CDS | 45.0% | |
| !! | CAGTTTGTTGCATCTGGCTT+TGG | + | chr7_4:47981330-47981349 | Msa1158570:intron | 45.0% |
| ! | TGCAGTCACAACCGCATTTT+AGG | - | chr7_4:47981691-47981710 | None:intergenic | 45.0% |
| TGTTGCTACAATAAGCCGTG+GGG | + | chr7_4:47981756-47981775 | Msa1158570:intron | 45.0% | |
| GATTGTTCCACTCCAATGTC+AGG | - | chr7_4:47981796-47981815 | None:intergenic | 45.0% | |
| ! | ACAGGGAACTGCTGTTTACA+AGG | + | chr7_4:47982005-47982024 | Msa1158570:intron | 45.0% |
| !! | GGAGCATCGACTGTTATGAT+GGG | + | chr7_4:47982117-47982136 | Msa1158570:CDS | 45.0% |
| ! | ATGATGGGAAGCTTCTTAGC+TGG | + | chr7_4:47982132-47982151 | Msa1158570:CDS | 45.0% |
| ! | CTTCTTAGCTGGTAGTCTTG+AGG | + | chr7_4:47982143-47982162 | Msa1158570:CDS | 45.0% |
| ! | TTTGAAGCTTGTGTCGTGTG+TGG | + | chr7_4:47982239-47982258 | Msa1158570:intron | 45.0% |
| ! | TTTTGACACGTTGGCCATTC+TGG | - | chr7_4:47982506-47982525 | None:intergenic | 45.0% |
| TCCCTTGAAGCTATGACTCA+AGG | + | chr7_4:47982543-47982562 | Msa1158570:CDS | 45.0% | |
| GCCTTGAGTCATAGCTTCAA+GGG | - | chr7_4:47982547-47982566 | None:intergenic | 45.0% | |
| TGCCTTGAGTCATAGCTTCA+AGG | - | chr7_4:47982548-47982567 | None:intergenic | 45.0% | |
| TGACTCAAGGCAGTGATCAA+AGG | + | chr7_4:47982556-47982575 | Msa1158570:CDS | 45.0% | |
| ! | TAAGCTTTGCTGTATCACCG+AGG | - | chr7_4:47982584-47982603 | None:intergenic | 45.0% |
| AAAATTGCCCAAGGGGTTGT+TGG | + | chr7_4:47982603-47982622 | Msa1158570:CDS | 45.0% | |
| TGTTGGAGCCGTTAAAGACA+AGG | + | chr7_4:47982620-47982639 | Msa1158570:CDS | 45.0% | |
| GTTGGAGCCGTTAAAGACAA+GGG | + | chr7_4:47982621-47982640 | Msa1158570:CDS | 45.0% | |
| CCTGGATCTAAGAAGGTCAT+GGG | - | chr7_4:47982730-47982749 | None:intergenic | 45.0% | |
| CCATGACCTTCTTAGATCCA+GGG | + | chr7_4:47982728-47982747 | Msa1158570:CDS | 45.0% | |
| GTGTGTCTCACCATTCTCAT+GGG | - | chr7_4:47983057-47983076 | None:intergenic | 45.0% | |
| ! | GTGTCTTTTAAGCACGACTG+AGG | + | chr7_4:47983235-47983254 | Msa1158570:intron | 45.0% |
| CATTATCTGCTTTGTCCACC+AGG | + | chr7_4:47983746-47983765 | Msa1158570:intron | 45.0% | |
| ! | CAGGTTGAAGGAGGAATTCA+TGG | + | chr7_4:47983786-47983805 | Msa1158570:CDS | 45.0% |
| TGAAGGAGGAATTCATGGAC+TGG | + | chr7_4:47983791-47983810 | Msa1158570:CDS | 45.0% | |
| CTTCTCTCCGACAACCACTA+TGG | + | chr7_4:47980268-47980287 | Msa1158570:exon | 50.0% | |
| CGGAGGAGTGAAATCCATAG+TGG | - | chr7_4:47980285-47980304 | None:intergenic | 50.0% | |
| ! | GCGGAGAAGCTTTTCAACAC+CGG | + | chr7_4:47980326-47980345 | Msa1158570:CDS | 50.0% |
| GAGGAAGATGAGGTCATCGT+AGG | - | chr7_4:47980363-47980382 | None:intergenic | 50.0% | |
| TGTAGTGAGGGAGGAAGATG+AGG | - | chr7_4:47980373-47980392 | None:intergenic | 50.0% | |
| AGCGACGAAGGGAGTTGAAA+GGG | - | chr7_4:47980450-47980469 | None:intergenic | 50.0% | |
| AAGCGACGAAGGGAGTTGAA+AGG | - | chr7_4:47980451-47980470 | None:intergenic | 50.0% | |
| TCCATAGGAGAAGCGACGAA+GGG | - | chr7_4:47980461-47980480 | None:intergenic | 50.0% | |
| GATTCGGAGACAGTGTCCAT+AGG | - | chr7_4:47980476-47980495 | None:intergenic | 50.0% | |
| CACTGTCTCCGAATCCTCTA+TGG | + | chr7_4:47980481-47980500 | Msa1158570:CDS | 50.0% | |
| GGCAGAAGCCATAGAGGATT+CGG | - | chr7_4:47980492-47980511 | None:intergenic | 50.0% | |
| ATCCTCTATGGCTTCTGCCA+TGG | + | chr7_4:47980493-47980512 | Msa1158570:CDS | 50.0% | |
| GTTCAGAGAGGATAGGCACA+CGG | - | chr7_4:47980601-47980620 | None:intergenic | 50.0% | |
| TGTGCCTATCCTCTCTGAAC+CGG | + | chr7_4:47980601-47980620 | Msa1158570:CDS | 50.0% | |
| ! | AGACGAAAACCGGTTCAGAG+AGG | - | chr7_4:47980613-47980632 | None:intergenic | 50.0% |
| !! | ACCGGTTTTCGTCTCTCCTT+CGG | + | chr7_4:47980619-47980638 | Msa1158570:CDS | 50.0% |
| ! | CACGCCCTTGTCATTTCGAT+TGG | - | chr7_4:47980753-47980772 | None:intergenic | 50.0% |
| CGGTGGAGCCTCCATATAAT+CGG | - | chr7_4:47980783-47980802 | None:intergenic | 50.0% | |
| CGATTATATGGAGGCTCCAC+CGG | + | chr7_4:47980781-47980800 | Msa1158570:CDS | 50.0% | |
| GATTATATGGAGGCTCCACC+GGG | + | chr7_4:47980782-47980801 | Msa1158570:CDS | 50.0% | |
| TTCGCAAGGTCAGAGTTCCA+CGG | - | chr7_4:47980815-47980834 | None:intergenic | 50.0% | |
| !! | GGATGAAGAGGTGGTGGATT+TGG | + | chr7_4:47980886-47980905 | Msa1158570:CDS | 50.0% |
| GGTGAGAGGCTATCCAAAGT+TGG | + | chr7_4:47980931-47980950 | Msa1158570:CDS | 50.0% | |
| !! | GGCTATCCAAAGTTGGTGAC+CGG | + | chr7_4:47980938-47980957 | Msa1158570:CDS | 50.0% |
| !! | TATCCAAAGTTGGTGACCGG+AGG | + | chr7_4:47980941-47980960 | Msa1158570:CDS | 50.0% |
| !! | AAAGTTGGTGACCGGAGGAT+CGG | + | chr7_4:47980946-47980965 | Msa1158570:CDS | 50.0% |
| TGGGACGAGGGAACAAGATA+AGG | + | chr7_4:47981006-47981025 | Msa1158570:CDS | 50.0% | |
| CGAGGGAACAAGATAAGGAG+AGG | + | chr7_4:47981011-47981030 | Msa1158570:CDS | 50.0% | |
| GAAAGCTGGTGTGAATGCTG+TGG | + | chr7_4:47981048-47981067 | Msa1158570:CDS | 50.0% | |
| !! | GGTGTTGATGGGTTGAGAGT+TGG | + | chr7_4:47981205-47981224 | Msa1158570:CDS | 50.0% |
| TGTGTGGCATACCCTGACAT+TGG | + | chr7_4:47981781-47981800 | Msa1158570:intron | 50.0% | |
| TCAGGGCCTTGAGCAATATC+TGG | - | chr7_4:47981963-47981982 | None:intergenic | 50.0% | |
| GGAGTTCCTGTCATTGCTGA+TGG | + | chr7_4:47982051-47982070 | Msa1158570:CDS | 50.0% | |
| GTTCCTGTCATTGCTGATGG+TGG | + | chr7_4:47982054-47982073 | Msa1158570:CDS | 50.0% | |
| ATGCCACCATCAGCAATGAC+AGG | - | chr7_4:47982060-47982079 | None:intergenic | 50.0% | |
| ! | GATGGTGGCATCTCAAACTC+TGG | + | chr7_4:47982069-47982088 | Msa1158570:CDS | 50.0% |
| !! | GGGAGCATCGACTGTTATGA+TGG | + | chr7_4:47982116-47982135 | Msa1158570:CDS | 50.0% |
| !! | GGCAGTGATCAAAGGTACCT+CGG | + | chr7_4:47982564-47982583 | Msa1158570:CDS | 50.0% |
| ACCATGCAAGCAGTAAGGCA+AGG | + | chr7_4:47982669-47982688 | Msa1158570:CDS | 50.0% | |
| ACCTTGCCTTACTGCTTGCA+TGG | - | chr7_4:47982673-47982692 | None:intergenic | 50.0% | |
| CCCATGACCTTCTTAGATCC+AGG | + | chr7_4:47982727-47982746 | Msa1158570:CDS | 50.0% | |
| CCCTGGATCTAAGAAGGTCA+TGG | - | chr7_4:47982731-47982750 | None:intergenic | 50.0% | |
| ! | ATCCAGGGTGTTAAGGCTAG+AGG | + | chr7_4:47982743-47982762 | Msa1158570:CDS | 50.0% |
| !! | TACCTCTAGCCTTAACACCC+TGG | - | chr7_4:47982748-47982767 | None:intergenic | 50.0% |
| GGGTGTTAAGGCTAGAGGTA+TGG | + | chr7_4:47982748-47982767 | Msa1158570:intron | 50.0% | |
| CAGCTCATCTCCCATGAGAA+TGG | + | chr7_4:47983044-47983063 | Msa1158570:intron | 50.0% | |
| CGTGTGTCTCACCATTCTCA+TGG | - | chr7_4:47983058-47983077 | None:intergenic | 50.0% | |
| ACGAAGACAAGAATCCCCCT+TGG | - | chr7_4:47983442-47983461 | None:intergenic | 50.0% | |
| TTTGTCCACCAGGTTCGTAC+TGG | + | chr7_4:47983756-47983775 | Msa1158570:intron | 50.0% | |
| ACTCCTCCGCCAATCGAAGA+CGG | + | chr7_4:47980296-47980315 | Msa1158570:CDS | 55.0% | |
| TAACCGTCTTCGATTGGCGG+AGG | - | chr7_4:47980302-47980321 | None:intergenic | 55.0% | |
| GCGTAACCGTCTTCGATTGG+CGG | - | chr7_4:47980305-47980324 | None:intergenic | 55.0% | |
| GCCAATCGAAGACGGTTACG+CGG | + | chr7_4:47980304-47980323 | Msa1158570:CDS | 55.0% | |
| AATCGAAGACGGTTACGCGG+CGG | + | chr7_4:47980307-47980326 | Msa1158570:CDS | 55.0% | |
| CGAAGTCGATGTAGTGAGGG+AGG | - | chr7_4:47980382-47980401 | None:intergenic | 55.0% | |
| CGGCGAAGTCGATGTAGTGA+GGG | - | chr7_4:47980385-47980404 | None:intergenic | 55.0% | |
| ! | GGAGAGGTCGACTTCATCAG+CGG | - | chr7_4:47980405-47980424 | None:intergenic | 55.0% |
| GATGTTACGACTGAGACGGG+AGG | - | chr7_4:47980426-47980445 | None:intergenic | 55.0% | |
| GGGGATGTTACGACTGAGAC+GGG | - | chr7_4:47980429-47980448 | None:intergenic | 55.0% | |
| GGGGGATGTTACGACTGAGA+CGG | - | chr7_4:47980430-47980449 | None:intergenic | 55.0% | |
| CGACGAAGGGAGTTGAAAGG+GGG | - | chr7_4:47980448-47980467 | None:intergenic | 55.0% | |
| GCGACGAAGGGAGTTGAAAG+GGG | - | chr7_4:47980449-47980468 | None:intergenic | 55.0% | |
| TCCCTTCGTCGCTTCTCCTA+TGG | + | chr7_4:47980457-47980476 | Msa1158570:CDS | 55.0% | |
| GTCCATAGGAGAAGCGACGA+AGG | - | chr7_4:47980462-47980481 | None:intergenic | 55.0% | |
| AACAGCGATACCGCCAAGTG+CGG | - | chr7_4:47980519-47980538 | None:intergenic | 55.0% | |
| CAACACTCCTTCACGTCAGG+CGG | + | chr7_4:47980550-47980569 | Msa1158570:CDS | 55.0% | |
| ACAATAGCCGCCTGACGTGA+AGG | - | chr7_4:47980560-47980579 | None:intergenic | 55.0% | |
| GCCGAAGGAGAGACGAAAAC+CGG | - | chr7_4:47980623-47980642 | None:intergenic | 55.0% | |
| GAGTTCCACGGTAGAGAACC+CGG | - | chr7_4:47980803-47980822 | None:intergenic | 55.0% | |
| GGTGAAGGATGAAGAGGTGG+TGG | + | chr7_4:47980880-47980899 | Msa1158570:CDS | 55.0% | |
| GATCCTCCGGTCACCAACTT+TGG | - | chr7_4:47980947-47980966 | None:intergenic | 55.0% | |
| ACTCAGGAAGTTTGCGCGGT+TGG | + | chr7_4:47981253-47981272 | Msa1158570:CDS | 55.0% | |
| CTCAGGAAGTTTGCGCGGTT+GGG | + | chr7_4:47981254-47981273 | Msa1158570:CDS | 55.0% | |
| AATAAGCCGTGGGGCTTGTG+TGG | + | chr7_4:47981765-47981784 | Msa1158570:intron | 55.0% | |
| GGCATACCCTGACATTGGAG+TGG | + | chr7_4:47981786-47981805 | Msa1158570:intron | 55.0% | |
| AACGGCTCCAACAACCCCTT+GGG | - | chr7_4:47982613-47982632 | None:intergenic | 55.0% | |
| TAACGGCTCCAACAACCCCT+TGG | - | chr7_4:47982614-47982633 | None:intergenic | 55.0% | |
| ATGGGCAGACTGCAGAGAGT+TGG | - | chr7_4:47982712-47982731 | None:intergenic | 55.0% | |
| ! | ACTGGAGCAGCACAGGTTGA+AGG | + | chr7_4:47983774-47983793 | Msa1158570:CDS | 55.0% |
| GCCGCGTAACCGTCTTCGAT+TGG | - | chr7_4:47980308-47980327 | None:intergenic | 60.0% | |
| GCGGCGAAGTCGATGTAGTG+AGG | - | chr7_4:47980386-47980405 | None:intergenic | 60.0% | |
| TACGACTGAGACGGGAGGAG+AGG | - | chr7_4:47980421-47980440 | None:intergenic | 60.0% | |
| GGCCATGGCAGAAGCCATAG+AGG | - | chr7_4:47980498-47980517 | None:intergenic | 60.0% | |
| CACGTCAGGCGGCTATTGTC+CGG | + | chr7_4:47980561-47980580 | Msa1158570:CDS | 60.0% | |
| AGAGAGGATAGGCACACGGC+GGG | - | chr7_4:47980597-47980616 | None:intergenic | 60.0% | |
| CAGAGAGGATAGGCACACGG+CGG | - | chr7_4:47980598-47980617 | None:intergenic | 60.0% | |
| TTCCACGGTAGAGAACCCGG+TGG | - | chr7_4:47980800-47980819 | None:intergenic | 60.0% | |
| GAGGAGGTTGAGAGGGTGAG+AGG | + | chr7_4:47980917-47980936 | Msa1158570:CDS | 60.0% | |
| ! | TTGGTGACCGGAGGATCGGT+TGG | + | chr7_4:47980950-47980969 | Msa1158570:CDS | 60.0% |
| TGGTGACCGGAGGATCGGTT+GGG | + | chr7_4:47980951-47980970 | Msa1158570:CDS | 60.0% | |
| GCGGATGGAGAGTGGATGGT+GGG | + | chr7_4:47980974-47980993 | Msa1158570:CDS | 60.0% | |
| CGGATGGAGAGTGGATGGTG+GGG | + | chr7_4:47980975-47980994 | Msa1158570:CDS | 60.0% | |
| ! | GGATGGAGAGTGGATGGTGG+GGG | + | chr7_4:47980976-47980995 | Msa1158570:CDS | 60.0% |
| GGTATGCCACACAAGCCCCA+CGG | - | chr7_4:47981774-47981793 | None:intergenic | 60.0% | |
| ! | GCTGGTAGTCTTGAGGCTCC+TGG | + | chr7_4:47982150-47982169 | Msa1158570:CDS | 60.0% |
| CTGCTCCAGTACGAACCTGG+TGG | - | chr7_4:47983764-47983783 | None:intergenic | 60.0% | |
| ! | GTGCTGCTCCAGTACGAACC+TGG | - | chr7_4:47983767-47983786 | None:intergenic | 60.0% |
| GGTTCGTACTGGAGCAGCAC+AGG | + | chr7_4:47983767-47983786 | Msa1158570:intron | 60.0% | |
| ! | GGAGCAGCACAGGTTGAAGG+AGG | + | chr7_4:47983777-47983796 | Msa1158570:CDS | 60.0% |
| GCTTCTGCCATGGCCGCACT+TGG | + | chr7_4:47980503-47980522 | Msa1158570:CDS | 65.0% | |
| TCTGCCATGGCCGCACTTGG+CGG | + | chr7_4:47980506-47980525 | Msa1158570:CDS | 65.0% | |
| GATACCGCCAAGTGCGGCCA+TGG | - | chr7_4:47980513-47980532 | None:intergenic | 65.0% | |
| GATAGGCACACGGCGGGACT+TGG | - | chr7_4:47980591-47980610 | None:intergenic | 65.0% | |
| CTCCACCGGGTTCTCTACCG+TGG | + | chr7_4:47980795-47980814 | Msa1158570:CDS | 65.0% | |
| GGTGACCGGAGGATCGGTTG+GGG | + | chr7_4:47980952-47980971 | Msa1158570:CDS | 65.0% | |
| ATCCGCCCCAACCGATCCTC+CGG | - | chr7_4:47980960-47980979 | None:intergenic | 65.0% | |
| TGGGGCGGATGGAGAGTGGA+TGG | + | chr7_4:47980970-47980989 | Msa1158570:CDS | 65.0% | |
| GGCGGATGGAGAGTGGATGG+TGG | + | chr7_4:47980973-47980992 | Msa1158570:CDS | 65.0% | |
| !! | TGGAGAGTGGATGGTGGGGG+CGG | + | chr7_4:47980979-47980998 | Msa1158570:CDS | 65.0% |
| !! | TGGATGGTGGGGGCGGCTAT+TGG | + | chr7_4:47980986-47981005 | Msa1158570:CDS | 65.0% |
| !! | GGATGGTGGGGGCGGCTATT+GGG | + | chr7_4:47980987-47981006 | Msa1158570:CDS | 65.0% |
| GAAGTTTGCGCGGTTGGGCG+TGG | + | chr7_4:47981259-47981278 | Msa1158570:CDS | 65.0% | |
| CACGGCGGGACTTGGCAGTC+CGG | - | chr7_4:47980583-47980602 | None:intergenic | 70.0% | |
| GACCGGAGGATCGGTTGGGG+CGG | + | chr7_4:47980955-47980974 | Msa1158570:CDS | 70.0% | |
| GGAGGATCGGTTGGGGCGGA+TGG | + | chr7_4:47980959-47980978 | Msa1158570:CDS | 70.0% | |
| CGGTTGGGGCGGATGGAGAG+TGG | + | chr7_4:47980966-47980985 | Msa1158570:CDS | 70.0% | |
| TGGGGGCGGCTATTGGGACG+AGG | + | chr7_4:47980993-47981012 | Msa1158570:CDS | 70.0% | |
| GGGGGCGGCTATTGGGACGA+GGG | + | chr7_4:47980994-47981013 | Msa1158570:CDS | 70.0% | |
| TTGCGCGGTTGGGCGTGGTC+AGG | + | chr7_4:47981264-47981283 | Msa1158570:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 47980060 | 47984117 | 47980060 | ID=Msa1158570;Name=Msa1158570 |
| chr7_4 | mRNA | 47980060 | 47984117 | 47980060 | ID=Msa1158570-mRNA-1;Parent=Msa1158570;Name=Msa1158570-mRNA-1;_AED=0.01;_eAED=0.01;_QI=227|1|1|1|1|1|4|278|502 |
| chr7_4 | exon | 47980060 | 47981285 | 47980060 | ID=Msa1158570-mRNA-1:exon:12802;Parent=Msa1158570-mRNA-1 |
| chr7_4 | exon | 47982009 | 47982188 | 47982009 | ID=Msa1158570-mRNA-1:exon:12803;Parent=Msa1158570-mRNA-1 |
| chr7_4 | exon | 47982507 | 47982764 | 47982507 | ID=Msa1158570-mRNA-1:exon:12804;Parent=Msa1158570-mRNA-1 |
| chr7_4 | exon | 47983768 | 47984117 | 47983768 | ID=Msa1158570-mRNA-1:exon:12805;Parent=Msa1158570-mRNA-1 |
| chr7_4 | five_prime_UTR | 47980060 | 47980286 | 47980060 | ID=Msa1158570-mRNA-1:five_prime_utr;Parent=Msa1158570-mRNA-1 |
| chr7_4 | CDS | 47980287 | 47981285 | 47980287 | ID=Msa1158570-mRNA-1:cds;Parent=Msa1158570-mRNA-1 |
| chr7_4 | CDS | 47982009 | 47982188 | 47982009 | ID=Msa1158570-mRNA-1:cds;Parent=Msa1158570-mRNA-1 |
| chr7_4 | CDS | 47982507 | 47982764 | 47982507 | ID=Msa1158570-mRNA-1:cds;Parent=Msa1158570-mRNA-1 |
| chr7_4 | CDS | 47983768 | 47983839 | 47983768 | ID=Msa1158570-mRNA-1:cds;Parent=Msa1158570-mRNA-1 |
| chr7_4 | three_prime_UTR | 47983840 | 47984117 | 47983840 | ID=Msa1158570-mRNA-1:three_prime_utr;Parent=Msa1158570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
