AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0310030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0310030 MtrunA17_Chr2g0278661 93.852 244 1 1 95 324 1 244 1.88e-149 419
Msa0310030 MtrunA17_Chr4g0050781 57.741 239 59 5 95 322 1 208 1.44e-62 197
Msa0310030 MtrunA17_Chr1g0210241 40.149 269 109 11 95 317 1 263 2.40e-32 121
Msa0310030 MtrunA17_Chr4g0035001 58.333 84 34 1 95 178 1 83 1.26e-28 108
Msa0310030 MtrunA17_Chr4g0035051 55.294 85 37 1 95 178 1 85 3.20e-27 103
Msa0310030 MtrunA17_Chr4g0035031 56.250 80 35 0 100 179 7 86 3.54e-26 102
Msa0310030 MtrunA17_Chr7g0266751 44.211 95 51 1 89 183 22 114 1.02e-21 89.4
Msa0310030 MtrunA17_Chr3g0086861 42.857 84 48 0 95 178 38 121 5.10e-19 87.4
Msa0310030 MtrunA17_Chr7g0219021 46.053 76 41 0 102 177 41 116 5.50e-18 82.0
Msa0310030 MtrunA17_Chr4g0061451 41.667 84 49 0 95 178 36 119 5.75e-18 82.4
Msa0310030 MtrunA17_Chr7g0263001 47.561 82 43 0 102 183 36 117 1.52e-17 78.2
Msa0310030 MtrunA17_Chr3g0121631 50.000 76 37 1 102 177 37 111 2.10e-17 77.8
Msa0310030 MtrunA17_Chr3g0116631 47.436 78 41 0 101 178 206 283 2.35e-17 80.9
Msa0310030 MtrunA17_Chr3g0116631 36.905 84 53 0 102 185 110 193 1.78e-11 63.9
Msa0310030 MtrunA17_Chr3g0119311 45.122 82 43 1 102 181 37 118 5.58e-17 76.3
Msa0310030 MtrunA17_Chr8g0346011 35.294 119 75 2 94 211 30 147 3.53e-16 77.8
Msa0310030 MtrunA17_Chr7g0276531 48.000 75 35 1 94 164 11 85 3.62e-16 77.0
Msa0310030 MtrunA17_Chr1g0198431 41.463 82 48 0 102 183 193 274 5.56e-16 77.0
Msa0310030 MtrunA17_Chr1g0168601 40.506 79 47 0 100 178 152 230 6.84e-16 75.9
Msa0310030 MtrunA17_Chr3g0101061 37.624 101 59 2 91 189 28 126 1.29e-15 77.4
Msa0310030 MtrunA17_Chr3g0088511 37.255 102 52 2 102 191 33 134 2.92e-15 71.6
Msa0310030 MtrunA17_Chr6g0481071 39.773 88 48 1 102 184 96 183 3.30e-15 72.8
Msa0310030 MtrunA17_Chr4g0017401 39.252 107 60 3 94 197 9 113 3.80e-15 74.3
Msa0310030 MtrunA17_Chr1g0181111 46.053 76 41 0 102 177 197 272 4.76e-15 74.3
Msa0310030 MtrunA17_Chr1g0181111 38.318 107 66 0 102 208 85 191 7.73e-13 67.8
Msa0310030 MtrunA17_Chr2g0290191 41.573 89 47 2 99 187 2 85 2.91e-14 73.2
Msa0310030 MtrunA17_Chr5g0426311 37.234 94 47 2 77 170 3 84 4.49e-14 71.2
Msa0310030 MtrunA17_Chr4g0058151 37.647 85 53 0 98 182 119 203 6.47e-14 71.2
Msa0310030 MtrunA17_Chr4g0058151 41.026 78 46 0 101 178 216 293 2.16e-13 69.7
Msa0310030 MtrunA17_Chr3g0144311 44.595 74 40 1 97 170 25 97 8.66e-14 70.5
Msa0310030 MtrunA17_Chr5g0447761 37.778 90 51 2 98 187 3 87 1.09e-13 71.6
Msa0310030 MtrunA17_Chr7g0267571 40.789 76 45 0 102 177 213 288 1.62e-13 70.1
Msa0310030 MtrunA17_Chr1g0186351 38.272 81 48 1 97 177 2 80 3.29e-13 70.1
Msa0310030 MtrunA17_Chr1g0186351 35.443 79 50 1 102 180 113 190 1.31e-11 65.1
Msa0310030 MtrunA17_Chr3g0120721 36.782 87 55 0 94 180 99 185 4.49e-13 69.3
Msa0310030 MtrunA17_Chr4g0042161 39.535 86 51 1 94 179 45 129 4.76e-13 65.9
Msa0310030 MtrunA17_Chr4g0031091 37.662 77 48 0 102 178 34 110 1.13e-12 63.9
Msa0310030 MtrunA17_Chr4g0018581 41.026 78 46 0 97 174 447 524 1.61e-12 68.2
Msa0310030 MtrunA17_Chr3g0127751 34.906 106 65 2 97 202 22 123 1.97e-12 66.2
Msa0310030 MtrunA17_Chr2g0327921 35.227 88 57 0 95 182 1 88 1.98e-12 62.4
Msa0310030 MtrunA17_Chr1g0177101 34.021 97 64 0 102 198 208 304 2.03e-12 67.0
Msa0310030 MtrunA17_Chr7g0268551 41.667 72 42 0 104 175 351 422 2.46e-12 67.4
Msa0310030 MtrunA17_Chr7g0219031 41.935 62 36 0 102 163 41 102 3.54e-12 62.4
Msa0310030 MtrunA17_Chr6g0449481 32.381 105 70 1 102 206 134 237 3.91e-12 66.6
Msa0310030 MtrunA17_Chr8g0371201 39.474 76 46 0 103 178 64 139 3.61e-11 62.8
Msa0310030 MtrunA17_Chr3g0135111 33.962 106 67 2 91 196 1 103 4.71e-11 63.2
Msa0310030 MtrunA17_Chr3g0110211 34.711 121 72 2 103 222 114 228 9.51e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0310030 AT3G26420.1 54.231 260 70 9 95 322 1 243 3.02e-61 196
Msa0310030 AT2G21660.2 62.025 79 30 0 100 178 7 85 7.32e-29 109
Msa0310030 AT4G39260.3 56.818 88 37 1 95 182 1 87 1.16e-28 106
Msa0310030 AT1G60650.2 41.176 136 68 2 100 234 11 135 5.69e-28 110
Msa0310030 AT1G60650.1 41.176 136 68 2 100 234 11 135 5.69e-28 110
Msa0310030 AT4G39260.2 57.143 84 35 1 95 178 1 83 1.13e-26 102
Msa0310030 AT5G04280.1 41.259 143 78 2 95 231 1 143 1.20e-26 107
Msa0310030 AT4G13850.4 53.247 77 36 0 102 178 36 112 5.48e-20 84.7
Msa0310030 AT4G13850.3 51.190 84 39 1 102 183 36 119 6.06e-20 85.1
Msa0310030 AT4G13850.1 51.190 84 39 1 102 183 36 119 8.60e-20 85.1
Msa0310030 AT4G39260.4 56.250 64 28 0 100 163 5 68 1.25e-19 83.2
Msa0310030 AT5G61030.2 50.000 76 38 0 102 177 41 116 1.36e-18 85.1
Msa0310030 AT5G61030.1 50.000 76 38 0 102 177 41 116 1.36e-18 85.1
Msa0310030 AT5G06210.1 46.914 81 43 0 102 182 35 115 4.63e-18 80.1
Msa0310030 AT4G24770.1 46.988 83 44 0 101 183 244 326 8.91e-18 83.2
Msa0310030 AT4G24770.1 39.773 88 53 0 98 185 147 234 1.81e-14 73.6
Msa0310030 AT4G24770.2 46.988 83 44 0 101 183 244 326 8.91e-18 83.2
Msa0310030 AT4G24770.2 39.773 88 53 0 98 185 147 234 1.81e-14 73.6
Msa0310030 AT3G23830.2 45.679 81 44 0 102 182 36 116 9.58e-18 79.0
Msa0310030 AT3G23830.1 45.679 81 44 0 102 182 36 116 9.58e-18 79.0
Msa0310030 AT2G37220.1 45.122 82 45 0 102 183 205 286 2.26e-17 81.3
Msa0310030 AT2G37220.1 35.870 92 59 0 94 185 84 175 1.79e-13 70.1
Msa0310030 AT1G18630.1 51.316 76 37 0 102 177 37 112 2.66e-17 78.2
Msa0310030 AT3G53460.1 45.122 82 45 0 102 183 258 339 2.89e-17 81.6
Msa0310030 AT3G53460.3 45.122 82 45 0 102 183 258 339 2.89e-17 81.6
Msa0310030 AT3G53460.2 45.122 82 45 0 102 183 258 339 2.89e-17 81.6
Msa0310030 AT3G53460.4 45.122 82 45 0 102 183 279 360 4.16e-17 81.6
Msa0310030 AT5G04280.3 44.762 105 52 2 133 231 1 105 8.15e-17 79.3
Msa0310030 AT5G04280.4 44.762 105 52 2 133 231 1 105 8.15e-17 79.3
Msa0310030 AT5G04280.5 44.762 105 52 2 133 231 1 105 8.15e-17 79.3
Msa0310030 AT5G04280.2 44.762 105 52 2 133 231 1 105 8.15e-17 79.3
Msa0310030 AT5G59865.1 40.777 103 51 1 96 188 11 113 1.47e-16 75.1
Msa0310030 AT1G33470.3 53.125 64 30 0 95 158 1 64 4.75e-16 76.6
Msa0310030 AT4G26650.1 42.553 94 52 1 96 189 10 101 5.74e-16 78.6
Msa0310030 AT1G33470.2 53.125 64 30 0 95 158 1 64 6.31e-16 76.6
Msa0310030 AT1G33470.1 53.125 64 30 0 95 158 1 64 6.34e-16 76.6
Msa0310030 AT4G26650.2 42.553 94 52 1 96 189 7 98 6.36e-16 78.6
Msa0310030 AT3G13224.2 37.037 108 65 1 94 198 102 209 6.90e-16 77.8
Msa0310030 AT1G76460.1 44.578 83 45 1 88 170 11 92 7.47e-16 77.0
Msa0310030 AT3G13224.3 36.607 112 68 1 94 202 93 204 8.61e-16 77.4
Msa0310030 AT1G74230.1 41.584 101 52 2 83 177 10 109 1.68e-15 75.9
Msa0310030 AT1G60650.3 36.607 112 53 2 127 234 1 98 1.92e-15 75.5
Msa0310030 AT2G46780.1 44.706 85 39 2 93 170 7 90 2.05e-15 76.3
Msa0310030 AT2G46780.2 44.706 85 39 2 93 170 7 90 2.05e-15 76.3
Msa0310030 AT3G07810.2 39.560 91 50 2 97 187 2 87 3.88e-15 76.3
Msa0310030 AT3G07810.1 39.560 91 50 2 97 187 2 87 4.09e-15 76.3
Msa0310030 AT1G22910.1 38.318 107 63 2 95 199 7 112 5.90e-15 73.9
Msa0310030 AT1G22910.2 38.318 107 63 2 95 199 7 112 6.68e-15 73.6
Msa0310030 AT5G55550.5 40.860 93 53 1 97 189 2 92 6.87e-15 75.5
Msa0310030 AT5G55550.4 40.860 93 53 1 97 189 2 92 6.87e-15 75.5
Msa0310030 AT5G55550.9 40.860 93 53 1 97 189 2 92 6.87e-15 75.5
Msa0310030 AT5G55550.7 40.860 93 53 1 97 189 2 92 6.87e-15 75.5
Msa0310030 AT5G55550.1 40.860 93 53 1 97 189 2 92 6.87e-15 75.5
Msa0310030 AT5G55550.2 40.860 93 53 1 97 189 2 92 7.41e-15 75.5
Msa0310030 AT5G55550.3 40.860 93 53 1 97 189 2 92 7.41e-15 75.5
Msa0310030 AT5G55550.6 40.860 93 53 1 97 189 2 92 7.41e-15 75.5
Msa0310030 AT5G55550.11 40.860 93 53 1 97 189 2 92 7.41e-15 75.5
Msa0310030 AT1G60650.4 40.777 103 49 2 133 234 1 92 9.15e-15 73.2
Msa0310030 AT1G20880.2 43.373 83 46 1 88 170 11 92 9.83e-15 73.6
Msa0310030 AT1G20880.3 43.373 83 46 1 88 170 11 92 9.83e-15 73.6
Msa0310030 AT1G20880.1 43.373 83 46 1 88 170 11 92 9.83e-15 73.6
Msa0310030 AT5G47320.1 44.156 77 43 0 102 178 32 108 1.24e-14 72.0
Msa0310030 AT1G60000.1 44.304 79 44 0 100 178 176 254 1.47e-14 72.8
Msa0310030 AT2G37510.1 48.649 74 38 0 102 175 35 108 1.73e-14 70.1
Msa0310030 AT2G27330.1 31.915 94 64 0 103 196 23 116 2.05e-14 69.3
Msa0310030 AT3G20930.1 40.476 84 50 0 102 185 283 366 2.49e-14 73.6
Msa0310030 AT5G50250.1 43.590 78 44 0 101 178 207 284 3.44e-14 72.4
Msa0310030 AT5G50250.1 35.632 87 56 0 99 185 111 197 1.93e-12 67.0
Msa0310030 AT4G13860.1 42.466 73 42 0 102 174 4 76 3.49e-14 67.8
Msa0310030 AT1G73530.1 31.731 104 68 1 102 205 78 178 3.54e-14 70.1
Msa0310030 AT1G22910.3 38.318 107 63 2 95 199 7 112 5.16e-14 72.4
Msa0310030 AT4G14300.1 31.818 132 81 3 97 228 2 124 9.24e-14 72.0
Msa0310030 AT4G14300.2 31.818 132 81 3 97 228 2 124 9.24e-14 72.0
Msa0310030 AT5G47620.1 39.326 89 49 2 97 185 2 85 1.22e-13 71.6
Msa0310030 AT5G47620.2 39.326 89 49 2 97 185 2 85 1.22e-13 71.6
Msa0310030 AT5G47620.5 39.326 89 49 2 97 185 2 85 1.22e-13 71.6
Msa0310030 AT1G22330.1 39.189 74 44 1 97 170 13 85 1.55e-13 70.5
Msa0310030 AT3G08000.1 46.053 76 41 0 102 177 42 117 1.70e-13 67.4
Msa0310030 AT1G78260.1 39.189 74 44 1 97 170 13 85 4.38e-13 68.9
Msa0310030 AT3G54770.3 44.595 74 40 1 97 170 13 85 4.69e-13 68.6
Msa0310030 AT3G54770.1 44.595 74 40 1 97 170 13 85 5.02e-13 68.6
Msa0310030 AT1G78260.2 39.189 74 44 1 97 170 13 85 1.11e-12 67.8
Msa0310030 AT5G55550.8 43.421 76 41 1 97 172 2 75 1.60e-12 68.6
Msa0310030 AT5G55550.10 43.421 76 41 1 97 172 2 75 1.75e-12 68.2
Msa0310030 AT5G53720.1 42.308 78 44 1 100 177 8 84 2.26e-12 63.2
Msa0310030 AT3G20930.2 38.202 89 50 1 102 185 283 371 2.39e-12 67.4
Msa0310030 AT2G21690.1 39.130 69 42 0 95 163 1 69 3.35e-12 63.2
Msa0310030 AT3G52380.1 36.842 76 48 0 102 177 220 295 4.50e-12 66.2
Msa0310030 AT3G52380.1 33.058 121 69 3 99 212 114 229 1.88e-11 64.7
Msa0310030 AT3G13224.1 38.554 83 51 0 94 176 102 184 5.92e-12 65.1
Msa0310030 AT5G47620.4 35.955 89 55 1 97 185 2 88 6.29e-12 66.6
Msa0310030 AT1G17640.2 32.258 93 61 1 102 194 67 157 7.41e-12 65.9
Msa0310030 AT1G17640.1 32.258 93 61 1 102 194 67 157 7.41e-12 65.9
Msa0310030 AT1G17640.3 32.258 93 61 1 102 194 67 157 7.41e-12 65.9
Msa0310030 AT5G51300.1 39.474 76 46 0 99 174 478 553 1.15e-11 66.2
Msa0310030 AT5G51300.2 39.474 76 46 0 99 174 478 553 1.15e-11 66.2
Msa0310030 AT5G51300.3 39.474 76 46 0 99 174 478 553 1.15e-11 66.2
Msa0310030 AT5G19030.1 40.000 80 48 0 104 183 80 159 1.19e-11 62.8
Msa0310030 AT1G03457.3 38.356 73 45 0 103 175 227 299 2.65e-11 63.9
Msa0310030 AT1G54080.1 35.780 109 68 2 88 195 134 241 2.75e-11 64.7
Msa0310030 AT5G40490.1 35.443 79 51 0 102 180 131 209 3.40e-11 64.3
Msa0310030 AT4G13850.2 33.577 137 50 2 102 236 36 133 4.71e-11 60.8
Msa0310030 AT1G03457.2 38.889 72 44 0 104 175 342 413 5.73e-11 63.5
Msa0310030 AT1G03457.1 38.356 73 45 0 103 175 332 404 5.94e-11 63.5
Msa0310030 AT3G14100.1 35.780 109 68 2 88 195 130 237 6.97e-11 63.2
Msa0310030 AT3G06970.1 38.272 81 49 1 97 177 8 87 6.97e-11 62.8
Msa0310030 AT5G54580.1 35.417 96 59 1 103 198 58 150 7.11e-11 60.5
Msa0310030 AT3G52150.2 40.260 77 46 0 101 177 177 253 9.26e-11 61.6
Msa0310030 AT3G52150.1 40.260 77 46 0 101 177 177 253 9.26e-11 61.6

Find 132 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGATCATTTCAGGGATTT+AGG 0.113329 2_4:+4892503 Msa0310030:CDS
TGTAATAAAGGTGATGTATT+TGG 0.129822 2_4:+4892476 Msa0310030:CDS
GATTCATGTACTAGAAATTA+TGG 0.138248 2_4:+4892411 Msa0310030:intron
TCTGGGCGTTCTCGTGGTTT+TGG 0.181319 2_4:+4893587 Msa0310030:CDS
TTGGGTTCTATGATCATTTC+AGG 0.206365 2_4:+4892495 Msa0310030:CDS
CGCAATCGTAGCCGAGATTA+TGG 0.231031 2_4:+4893770 Msa0310030:CDS
GGTGGGCGCGACAGGGATTC+TGG 0.257534 2_4:+4893956 Msa0310030:CDS
TTATTACAATTCTCAACATT+AGG 0.270210 2_4:-4892461 None:intergenic
GGGATGGTGGTGGGCGTGAC+AGG 0.302789 2_4:+4894074 Msa0310030:CDS
GTAATAAAGGTGATGTATTT+GGG 0.310555 2_4:+4892477 Msa0310030:CDS
ACTAGAAATTATGGGGTTCT+TGG 0.310910 2_4:+4892420 Msa0310030:intron
GCTCTTATGGTGGGCGCGAC+AGG 0.315939 2_4:+4893948 Msa0310030:CDS
CCTCCTCTTTCTCCTTCACT+AGG 0.321904 2_4:-4893863 None:intergenic
ATGATCATTTCAGGGATTTA+GGG 0.328921 2_4:+4892504 Msa0310030:CDS
TATTACAATTCTCAACATTA+GGG 0.336323 2_4:-4892460 None:intergenic
GTGGTGGTTGACAAATTCTC+TGG 0.342986 2_4:+4893569 Msa0310030:CDS
GGGATGGTGGTGGTCGTGAT+AGG 0.344211 2_4:+4893990 Msa0310030:CDS
CCGTATGAGCGTCGTGGATC+TGG 0.346433 2_4:+4894115 Msa0310030:CDS
CTAGAAATTATGGGGTTCTT+GGG 0.354557 2_4:+4892421 Msa0310030:intron
ATCTCTAGATCCTTGTGGTT+GGG 0.361996 2_4:-4893705 None:intergenic
GAGCGATCTGCATTCCTATC+AGG 0.364268 2_4:-4893929 None:intergenic
GAGGAGGAAGGTATGGTGGC+AGG 0.365261 2_4:+4893879 Msa0310030:CDS
GATGAGTTTCGTTGCTTCAT+TGG 0.366302 2_4:+4892778 Msa0310030:CDS
TCATATGTTTCGACCGCCTT+TGG 0.371244 2_4:-4889458 Msa0310020:five_prime_UTR
ATTCATGTACTAGAAATTAT+GGG 0.371446 2_4:+4892412 Msa0310030:intron
GAGATGGTGGTGGGCGTGAC+AGG 0.372970 2_4:+4894032 Msa0310030:CDS
AGGAATGCAGATCGCTCTTA+TGG 0.388029 2_4:+4893935 Msa0310030:CDS
ATGCTATCTTTATTTACTGC+TGG 0.389986 2_4:+4894458 Msa0310030:three_prime_UTR
GACGGCTAGGGTTTGTTACA+TGG 0.392102 2_4:+4889501 Msa0310030:CDS
TACATAGACCTATTAGTTGC+TGG 0.393238 2_4:+4894487 Msa0310030:three_prime_UTR
CTGTAAATCCAGCAACTAAT+AGG 0.400057 2_4:-4894495 None:intergenic
GGAGAAAGAGGAGGAAGGTA+TGG 0.416433 2_4:+4893872 Msa0310030:CDS
GGGATTCTGGTGGTCGTGAC+AGG 0.420547 2_4:+4893969 Msa0310030:CDS
GGTGGGCGTGACAGGGATGG+TGG 0.434664 2_4:+4894040 Msa0310030:CDS
GGAGGTAGTCGAGGGTCTAA+TGG 0.442975 2_4:+4893791 Msa0310030:CDS
GGGATGGTGGTGGACGTGAC+AGG 0.448436 2_4:+4894053 Msa0310030:CDS
AATGTTGAGAATTGTAATAA+AGG 0.448795 2_4:+4892464 Msa0310030:CDS
TGATATAAAGGCAGATGAAA+AGG 0.469672 2_4:+4889406 Msa0310030:intron
GGACGTGACAGGGATGGTGG+TGG 0.471105 2_4:+4894064 Msa0310030:CDS
GTGAGTCACGACCACGTTCT+CGG 0.471685 2_4:-4893742 None:intergenic
TGGGTTCTATGATCATTTCA+GGG 0.473865 2_4:+4892496 Msa0310030:CDS
AGGAGGAAGGTATGGTGGCA+GGG 0.478296 2_4:+4893880 Msa0310030:CDS
AAAGATGCATTTGAAAAGTA+CGG 0.478989 2_4:+4892835 Msa0310030:CDS
CATCTCTAGATCCTTGTGGT+TGG 0.481683 2_4:-4893706 None:intergenic
CTCCTCTTTCTCCTTCACTA+GGG 0.489943 2_4:-4893862 None:intergenic
GGGATTTAGGGTATCAGTTG+TGG 0.489972 2_4:+4892516 Msa0310030:CDS
GGGCGTGACAGGGATGGTGG+TGG 0.490271 2_4:+4894043 Msa0310030:CDS
CTCTTATGGTGGGCGCGACA+GGG 0.500774 2_4:+4893949 Msa0310030:CDS
GAGTTTCGTTGCTTCATTGG+TGG 0.502387 2_4:+4892781 Msa0310030:CDS
TGCCCTAGTGAAGGAGAAAG+AGG 0.503529 2_4:+4893860 Msa0310030:CDS
GGTGATGGTTTGTCGAAAAG+AGG 0.504151 2_4:+4889308 Msa0310030:CDS
GAAAGAGGAGGAAGGTATGG+TGG 0.504556 2_4:+4893875 Msa0310030:CDS
CACTCCCTTGCAAAATGACC+GGG 0.506117 2_4:-4893839 None:intergenic
TGCTTTAAGTGTGGTAAACC+CGG 0.508262 2_4:+4893821 Msa0310030:CDS
GGCAGGGAAAGTAGATATAG+TGG 0.510142 2_4:+4893896 Msa0310030:CDS
GGTGGTGGGCGTGACAGGGA+TGG 0.515362 2_4:+4894037 Msa0310030:CDS
AGTAGATATAGTGGTGGCTA+TGG 0.515924 2_4:+4893905 Msa0310030:CDS
GCACTCCCTTGCAAAATGAC+CGG 0.518487 2_4:-4893840 None:intergenic
GGCTATGAATGGAATTGACT+TGG 0.522243 2_4:+4893655 Msa0310030:CDS
AAATTCTCTGGGCGTTCTCG+TGG 0.522551 2_4:+4893581 Msa0310030:CDS
GGATGGTGGTGGTCGTGATA+GGG 0.522834 2_4:+4893991 Msa0310030:CDS
GTGAACAGTGTACGACGGCT+AGG 0.527316 2_4:+4889488 Msa0310030:CDS
GGTCGTGACAGGGATGGTGG+TGG 0.527932 2_4:+4893980 Msa0310030:CDS
GCTTCATTGGTGGCCTTGCA+TGG 0.529203 2_4:+4892791 Msa0310030:CDS
GACGTGACAGGGATGGTGGT+GGG 0.532025 2_4:+4894065 Msa0310030:CDS
GAGGCTATTGAGGCTATGAA+TGG 0.532703 2_4:+4893644 Msa0310030:CDS
TTGTGTGTAGTTTCAAATGT+CGG 0.544631 2_4:+4892750 Msa0310030:intron
CGGCAAGCTTGTTGAGGCAA+AGG 0.545418 2_4:+4892855 Msa0310030:CDS
GGATGGTGGTGGGCGTGACA+GGG 0.545644 2_4:+4894075 Msa0310030:CDS
CTCGACTACCTCCATAATCT+CGG 0.546127 2_4:-4893781 None:intergenic
AGCAATGGAAGAGGCTATTG+AGG 0.547802 2_4:+4893634 Msa0310030:CDS
ATTTGATGACAAGGAAGCAA+TGG 0.550117 2_4:+4893619 Msa0310030:CDS
TATCAGAAGTTGACCATGCA+AGG 0.550661 2_4:-4892804 None:intergenic
GTAGTTTCAAATGTCGGATA+CGG 0.558465 2_4:+4892756 Msa0310030:intron
CCAGATCCACGACGCTCATA+CGG 0.559082 2_4:-4894115 None:intergenic
GTTGCTGGATTTACAGCAGT+GGG 0.561015 2_4:+4894502 Msa0310030:three_prime_UTR
ATTTCAATAGAGCTAACGAT+TGG 0.562109 2_4:-4894392 None:intergenic
GTGGTGGCTATGGTCCTGAT+AGG 0.564092 2_4:+4893915 Msa0310030:CDS
GACAGGGATCGCGATCGTGC+GGG 0.566766 2_4:+4894091 Msa0310030:CDS
AAAGGCGGTCGAAACATATG+AGG 0.566855 2_4:+4889460 Msa0310030:CDS
TGACAGGGATCGCGATCGTG+CGG 0.569790 2_4:+4894090 Msa0310030:CDS
GGTGGACGTGACAGGGATGG+TGG 0.570523 2_4:+4894061 Msa0310030:CDS
GCAAGGGAGTGCCCTAGTGA+AGG 0.574118 2_4:+4893851 Msa0310030:CDS
TGATACCTCTAGCTTCATTG+AGG 0.576981 2_4:+4894148 Msa0310030:exon
GGACGTGACAGAGATGGTGG+TGG 0.579527 2_4:+4894022 Msa0310030:CDS
CGAGATTATGGAGGTAGTCG+AGG 0.583349 2_4:+4893782 Msa0310030:CDS
AGTGATGGTGGCACAACCAA+AGG 0.584848 2_4:+4889442 Msa0310030:CDS
AATGCAGATCGCTCTTATGG+TGG 0.584861 2_4:+4893938 Msa0310030:CDS
GACGTGACAGAGATGGTGGT+GGG 0.586113 2_4:+4894023 Msa0310030:CDS
GGTGGTCGTGACAGGGATGG+TGG 0.589081 2_4:+4893977 Msa0310030:CDS
TTCATGTACTAGAAATTATG+GGG 0.591313 2_4:+4892413 Msa0310030:intron
TGGTGGTTGACAAATTCTCT+GGG 0.595910 2_4:+4893570 Msa0310030:CDS
TGAACAGTGTACGACGGCTA+GGG 0.596211 2_4:+4889489 Msa0310030:CDS
GGATTCTGGTGGTCGTGACA+GGG 0.596366 2_4:+4893970 Msa0310030:CDS
GGATGGTGGTGGACGTGACA+GGG 0.599517 2_4:+4894054 Msa0310030:CDS
TGACAAGGAAGCAATGGAAG+AGG 0.600324 2_4:+4893625 Msa0310030:CDS
GGTCGTGATAGGGATGGCGG+TGG 0.604807 2_4:+4894001 Msa0310030:CDS
ATGCAGATCGCTCTTATGGT+GGG 0.607336 2_4:+4893939 Msa0310030:CDS
TAGCCGTCGTACACTGTTCA+CGG 0.608131 2_4:-4889486 None:intergenic
GATGATCGTCACCGAGAACG+TGG 0.610333 2_4:+4893731 Msa0310030:CDS
TCTGGTGGTCGTGACAGGGA+TGG 0.611424 2_4:+4893974 Msa0310030:CDS
GTTTGTCACATTTGATGACA+AGG 0.613183 2_4:+4893610 Msa0310030:CDS
GGAGAGGATGACGACAGTGA+TGG 0.617341 2_4:+4889427 Msa0310030:CDS
GGTGGTGGACGTGACAGGGA+TGG 0.617799 2_4:+4894058 Msa0310030:CDS
AGTTGCTGGATTTACAGCAG+TGG 0.618491 2_4:+4894501 Msa0310030:three_prime_UTR
GTGAAGGAGAAAGAGGAGGA+AGG 0.620131 2_4:+4893867 Msa0310030:CDS
ACGGCTAGGGTTTGTTACAT+GGG 0.621053 2_4:+4889502 Msa0310030:CDS
ATGAATGGAATTGACTTGGA+TGG 0.625730 2_4:+4893659 Msa0310030:CDS
GGTGGTGGTCGTGATAGGGA+TGG 0.627036 2_4:+4893995 Msa0310030:CDS
TAAAGGCAGATGAAAAGGAG+AGG 0.628409 2_4:+4889411 Msa0310030:intron
AGATGGTGGTGGGCGTGACA+GGG 0.636859 2_4:+4894033 Msa0310030:CDS
AAGTACCTCAATGAAGCTAG+AGG 0.637962 2_4:-4894153 None:intergenic
GAGGATGACGACAGTGATGG+TGG 0.638446 2_4:+4889430 Msa0310030:CDS
GAGATTATGGAGGTAGTCGA+GGG 0.639832 2_4:+4893783 Msa0310030:CDS
GGCGGTGGACGTGACAGAGA+TGG 0.640462 2_4:+4894016 Msa0310030:CDS
TCATCATCTCTAGATCCTTG+TGG 0.641739 2_4:-4893710 None:intergenic
GGTGGACGTGACAGAGATGG+TGG 0.651176 2_4:+4894019 Msa0310030:CDS
GGTGGTCGTGATAGGGATGG+CGG 0.656307 2_4:+4893998 Msa0310030:CDS
GGGCGCGACAGGGATTCTGG+TGG 0.659692 2_4:+4893959 Msa0310030:CDS
TATGAGCGTCGTGGATCTGG+AGG 0.659825 2_4:+4894118 Msa0310030:CDS
ATGGAATTGACTTGGATGGA+CGG 0.661188 2_4:+4893663 Msa0310030:CDS
AAAGTACGGCAAGCTTGTTG+AGG 0.663446 2_4:+4892849 Msa0310030:CDS
CCTAGTGAAGGAGAAAGAGG+AGG 0.670336 2_4:+4893863 Msa0310030:CDS
GATGGTGGCACAACCAAAGG+CGG 0.671472 2_4:+4889445 Msa0310030:CDS
GCGGGACCGTATGAGCGTCG+TGG 0.672558 2_4:+4894109 Msa0310030:CDS
GTTGATAAAGCCCAACCACA+AGG 0.676735 2_4:+4893695 Msa0310030:CDS
AATCGTAGCCGAGATTATGG+AGG 0.691072 2_4:+4893773 Msa0310030:CDS
GGTAGTCGAGGGTCTAATGG+CGG 0.694342 2_4:+4893794 Msa0310030:CDS
GAAGCTAGAGGTATCAACGA+TGG 0.695562 2_4:-4894141 None:intergenic
AGGGAAAGTAGATATAGTGG+TGG 0.695623 2_4:+4893899 Msa0310030:CDS
GGCGGTGAATGCTTTAAGTG+TGG 0.713199 2_4:+4893812 Msa0310030:CDS
TAGCCGTGAACAGTGTACGA+CGG 0.779751 2_4:+4889483 Msa0310030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAATATTTATTTATTTA+AGG + chr2_4:4891415-4891434 Msa0310030:intron 0.0%
!! TAAAAAATAACTTGATATAA+AGG + chr2_4:4889394-4889413 Msa0310030:intron 10.0%
!! TAAAAATAGAAATATAGTAA+TGG - chr2_4:4889766-4889785 None:intergenic 10.0%
!! ACTATTAATTCATATTAATA+TGG + chr2_4:4889907-4889926 Msa0310030:intron 10.0%
!! GATAATAATAAGAATTAAAA+AGG + chr2_4:4890056-4890075 Msa0310030:intron 10.0%
!!! TTTTACTCATATATTATTAT+AGG + chr2_4:4890399-4890418 Msa0310030:intron 10.0%
!! TTTACTCATATATTATTATA+GGG + chr2_4:4890400-4890419 Msa0310030:intron 10.0%
!! ATCAAAAAAAAAAAAAAACA+TGG - chr2_4:4892394-4892413 None:intergenic 10.0%
!! AAATGAGAAAAAATTTAGTT+CGG + chr2_4:4889572-4889591 Msa0310030:intron 15.0%
!!! TTTTATCTCCTTTAAAAAAA+GGG - chr2_4:4889828-4889847 None:intergenic 15.0%
!!! ATTTTATCTCCTTTAAAAAA+AGG - chr2_4:4889829-4889848 None:intergenic 15.0%
!!! AAAAATAATTTGTATCCTTA+AGG + chr2_4:4890167-4890186 Msa0310030:intron 15.0%
!!! AAAAATAATTTGTATCCTTA+AGG + chr2_4:4890167-4890186 Msa0310030:intron 15.0%
!! AATGAATCATATGTTAATAT+AGG + chr2_4:4890343-4890362 Msa0310030:intron 15.0%
!! CATGAACAAATTATAAAATA+TGG - chr2_4:4890370-4890389 None:intergenic 15.0%
!!! GACTGATTAATTTTTATTTA+AGG - chr2_4:4891288-4891307 None:intergenic 15.0%
!! AAATAAAAATTAATCAGTCA+AGG + chr2_4:4891289-4891308 Msa0310030:intron 15.0%
!! TGTAACAAATAAATAACTTA+AGG + chr2_4:4891729-4891748 Msa0310030:intron 15.0%
!! TAAATGCTTAATTAATGATT+TGG - chr2_4:4891757-4891776 None:intergenic 15.0%
!! TGTAACAAATAAATAACTTA+AGG + chr2_4:4891729-4891748 Msa0310030:intron 15.0%
!! TAAATGCTTAATTAATGATT+TGG - chr2_4:4891757-4891776 None:intergenic 15.0%
!! AGAACAAAATAAAATTGAAT+CGG - chr2_4:4892122-4892141 None:intergenic 15.0%
!!! TAGAAAACCAATTTTATTAT+GGG - chr2_4:4893359-4893378 None:intergenic 15.0%
!!! AGAAATATAGTAATGGAAAA+TGG - chr2_4:4889759-4889778 None:intergenic 20.0%
!!! TAACATTTCCCTTTTTTTAA+AGG + chr2_4:4889817-4889836 Msa0310030:intron 20.0%
!!! ATGATTACTGTATTTTTTGA+TGG - chr2_4:4890017-4890036 None:intergenic 20.0%
!!! TAATCCAAATATGTGTATTT+TGG + chr2_4:4890450-4890469 Msa0310030:intron 20.0%
!! AATTTCTCAAACATATGATT+GGG - chr2_4:4890517-4890536 None:intergenic 20.0%
!! TTCTAAATAACTAAAATGCA+TGG + chr2_4:4890852-4890871 Msa0310030:intron 20.0%
!! TCTAAATAACTAAAATGCAT+GGG + chr2_4:4890853-4890872 Msa0310030:intron 20.0%
!! TTAAGGCTTAATTAATGATT+TGG + chr2_4:4891432-4891451 Msa0310030:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr2_4:4891492-4891511 Msa0310030:intron 20.0%
!! TTTATTACAATTCTCAACTT+AGG - chr2_4:4892196-4892215 None:intergenic 20.0%
!!! TAGTCATTTTTTTGGAATTT+AGG + chr2_4:4892237-4892256 Msa0310030:intron 20.0%
!!! AGTCATTTTTTTGGAATTTA+GGG + chr2_4:4892238-4892257 Msa0310030:intron 20.0%
!! ATGTTGTTATGTATATATGT+GGG + chr2_4:4892347-4892366 Msa0310030:intron 20.0%
!! ATTCATGTACTAGAAATTAT+GGG + chr2_4:4892412-4892431 Msa0310030:intron 20.0%
!! TATTACAATTCTCAACATTA+GGG - chr2_4:4892463-4892482 None:intergenic 20.0%
!! TTATTACAATTCTCAACATT+AGG - chr2_4:4892464-4892483 None:intergenic 20.0%
!! AATGTTGAGAATTGTAATAA+AGG + chr2_4:4892464-4892483 Msa0310030:CDS 20.0%
!! ACATTTAAATTGTGTATTTG+AGG + chr2_4:4892609-4892628 Msa0310030:intron 20.0%
!! AATATTTAAATCAGCTATAG+GGG - chr2_4:4892704-4892723 None:intergenic 20.0%
!! GAATATTTAAATCAGCTATA+GGG - chr2_4:4892705-4892724 None:intergenic 20.0%
!! TGAATATTTAAATCAGCTAT+AGG - chr2_4:4892706-4892725 None:intergenic 20.0%
!!! ATAGCTGATTTAAATATTCA+AGG + chr2_4:4892706-4892725 Msa0310030:intron 20.0%
!!! CTTTTATTCATTGATAACAT+TGG + chr2_4:4893011-4893030 Msa0310030:intron 20.0%
!!! GTAGAAAACCAATTTTATTA+TGG - chr2_4:4893360-4893379 None:intergenic 20.0%
!!! TACTGAATTTATTTTGTAAG+TGG + chr2_4:4893377-4893396 Msa0310030:intron 20.0%
!! TAATCATTCATTGACATTTA+AGG + chr2_4:4893526-4893545 Msa0310030:intron 20.0%
!!! ATATTTTGATTTGCAATACT+TGG + chr2_4:4894337-4894356 Msa0310030:three_prime_UTR 20.0%
!! TAATTTGTGTCCACAAATTA+GGG + chr2_4:4890113-4890132 Msa0310030:intron 25.0%
!! ACAAAATTTTCCCTAATTTG+TGG - chr2_4:4890126-4890145 None:intergenic 25.0%
!!! TCATTTAACTTTTTGCCTTA+AGG - chr2_4:4890185-4890204 None:intergenic 25.0%
!! TAATTTGTGTCCACAAATTA+GGG + chr2_4:4890113-4890132 Msa0310030:intron 25.0%
!! ACAAAATTTTCCCTAATTTG+TGG - chr2_4:4890126-4890145 None:intergenic 25.0%
! ACAACCAAAATACACATATT+TGG - chr2_4:4890457-4890476 None:intergenic 25.0%
! ATTTCTCAAACATATGATTG+GGG - chr2_4:4890516-4890535 None:intergenic 25.0%
! CAATTTCTCAAACATATGAT+TGG - chr2_4:4890518-4890537 None:intergenic 25.0%
!! TTCACTTGTGCATTTTATTA+TGG - chr2_4:4890581-4890600 None:intergenic 25.0%
! ATCAAAGTTAATTTAGTCAG+TGG - chr2_4:4890689-4890708 None:intergenic 25.0%
! CTTTAATTCTACAACTATGT+TGG + chr2_4:4891008-4891027 Msa0310030:intron 25.0%
! TATAAAATGCTTGAGAAAAG+TGG + chr2_4:4891088-4891107 Msa0310030:intron 25.0%
! ACATTAAATTAAGCATCAAG+GGG - chr2_4:4891142-4891161 None:intergenic 25.0%
! CACATTAAATTAAGCATCAA+GGG - chr2_4:4891143-4891162 None:intergenic 25.0%
! ACACATTAAATTAAGCATCA+AGG - chr2_4:4891144-4891163 None:intergenic 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr2_4:4891459-4891478 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr2_4:4891460-4891479 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + chr2_4:4891463-4891482 Msa0310030:intron 25.0%
! GCTAACATATACTAACTTAA+GGG - chr2_4:4891519-4891538 None:intergenic 25.0%
!!! CATGTTTCTATTTAACGTTT+TGG - chr2_4:4891570-4891589 None:intergenic 25.0%
! GTTAAATAGAAACATGTGAA+CGG + chr2_4:4891574-4891593 Msa0310030:intron 25.0%
! TTTAACGGTGGAAATTTATT+TGG + chr2_4:4891647-4891666 Msa0310030:intron 25.0%
! ACATGCATTTAACTGAATTT+GGG - chr2_4:4891797-4891816 None:intergenic 25.0%
! TACATGCATTTAACTGAATT+TGG - chr2_4:4891798-4891817 None:intergenic 25.0%
! TACTGCATTTAACTGAATTT+GGG - chr2_4:4891882-4891901 None:intergenic 25.0%
! ATACTGCATTTAACTGAATT+TGG - chr2_4:4891883-4891902 None:intergenic 25.0%
! GAATGAATGAATGAATATGT+TGG - chr2_4:4892065-4892084 None:intergenic 25.0%
!!! GTGTTCTTTAGTCATTTTTT+TGG + chr2_4:4892229-4892248 Msa0310030:intron 25.0%
!!! TTTTTTGGAATTTAGGGTTT+TGG + chr2_4:4892244-4892263 Msa0310030:intron 25.0%
!!! TTTTTGGAATTTAGGGTTTT+GGG + chr2_4:4892245-4892264 Msa0310030:intron 25.0%
!! CATTTGAGGTTAATTTGATT+GGG + chr2_4:4892317-4892336 Msa0310030:intron 25.0%
! CATGTTGTTATGTATATATG+TGG + chr2_4:4892346-4892365 Msa0310030:intron 25.0%
! GATTCATGTACTAGAAATTA+TGG + chr2_4:4892411-4892430 Msa0310030:intron 25.0%
! TTCATGTACTAGAAATTATG+GGG + chr2_4:4892413-4892432 Msa0310030:intron 25.0%
! TGTAATAAAGGTGATGTATT+TGG + chr2_4:4892476-4892495 Msa0310030:CDS 25.0%
! GTAATAAAGGTGATGTATTT+GGG + chr2_4:4892477-4892496 Msa0310030:CDS 25.0%
!! TATTTGAGGTGAATTTGATT+GGG + chr2_4:4892623-4892642 Msa0310030:intron 25.0%
! TTTGATTGGGTTTATTATTG+TGG + chr2_4:4892636-4892655 Msa0310030:intron 25.0%
!! TCTTGTTTATATATGTGTGA+TGG + chr2_4:4892669-4892688 Msa0310030:intron 25.0%
! CTTGTTTATATATGTGTGAT+GGG + chr2_4:4892670-4892689 Msa0310030:intron 25.0%
! AAAGATGCATTTGAAAAGTA+CGG + chr2_4:4892835-4892854 Msa0310030:CDS 25.0%
! AACATGAAATTGTAACAAGA+TGG - chr2_4:4892928-4892947 None:intergenic 25.0%
! AAAAGAAAAATCACAGAAGT+TGG - chr2_4:4892996-4893015 None:intergenic 25.0%
! TGATAACATTGGATGAAAAA+TGG + chr2_4:4893022-4893041 Msa0310030:intron 25.0%
! AAAATTAGCATACCAAACAT+AGG + chr2_4:4893070-4893089 Msa0310030:intron 25.0%
! TCAAATTAGTCAATTCAAAC+AGG + chr2_4:4893333-4893352 Msa0310030:intron 25.0%
!!! TGATTTTTGCAGTTTTGAAT+TGG + chr2_4:4894237-4894256 Msa0310030:intron 25.0%
!!! CAGTGTTCTTGAATTTTTTA+TGG + chr2_4:4894296-4894315 Msa0310030:three_prime_UTR 25.0%
TGATATAAAGGCAGATGAAA+AGG + chr2_4:4889406-4889425 Msa0310030:intron 30.0%
GATAAGTTAAACGGGAAAAA+TGG + chr2_4:4889598-4889617 Msa0310030:intron 30.0%
!!! CAATGCAAACATGCTATTTT+TGG - chr2_4:4889688-4889707 None:intergenic 30.0%
GGATACAAATATGTAAAGTC+CGG + chr2_4:4889974-4889993 Msa0310030:intron 30.0%
GATACAAATATGTAAAGTCC+GGG + chr2_4:4889975-4889994 Msa0310030:intron 30.0%
ATACAAATATGTAAAGTCCG+GGG + chr2_4:4889976-4889995 Msa0310030:intron 30.0%
! CTAATTTGTGTCCACAAATT+AGG + chr2_4:4890112-4890131 Msa0310030:intron 30.0%
! CTAATTTGTGTCCACAAATT+AGG + chr2_4:4890112-4890131 Msa0310030:intron 30.0%
! ACAGAATTTTCCCTAATTTG+TGG - chr2_4:4890291-4890310 None:intergenic 30.0%
ACTAAAATGAACACGATAAG+TGG + chr2_4:4891041-4891060 Msa0310030:intron 30.0%
TTTAATGTGTTTGTGTGCTT+TGG + chr2_4:4891154-4891173 Msa0310030:intron 30.0%
GGCTAACATATACTAACTTA+AGG - chr2_4:4891520-4891539 None:intergenic 30.0%
! CAATGGCTTAACGATTTTAA+CGG + chr2_4:4891632-4891651 Msa0310030:intron 30.0%
!!! GTTTTGTTTTGATTCGTGTA+TGG + chr2_4:4892142-4892161 Msa0310030:intron 30.0%
!! TCATGGGTTTACTTTGATTT+TGG + chr2_4:4892168-4892187 Msa0310030:intron 30.0%
TGTAATAAAGCTACTACCTT+TGG + chr2_4:4892207-4892226 Msa0310030:intron 30.0%
AAATGACTAAAGAACACCAA+AGG - chr2_4:4892226-4892245 None:intergenic 30.0%
TATCCATTTAGTTGTACACT+TGG + chr2_4:4892279-4892298 Msa0310030:intron 30.0%
TCTACTTAATTGTGCATTTG+AGG + chr2_4:4892303-4892322 Msa0310030:intron 30.0%
! GCATTTGAGGTTAATTTGAT+TGG + chr2_4:4892316-4892335 Msa0310030:intron 30.0%
TGTTATGTATATATGTGGGA+TGG + chr2_4:4892351-4892370 Msa0310030:intron 30.0%
GTTATGTATATATGTGGGAT+GGG + chr2_4:4892352-4892371 Msa0310030:intron 30.0%
TATGATCATTTCAGGGATTT+AGG + chr2_4:4892503-4892522 Msa0310030:CDS 30.0%
ATGATCATTTCAGGGATTTA+GGG + chr2_4:4892504-4892523 Msa0310030:CDS 30.0%
! GTATTTGAGGTGAATTTGAT+TGG + chr2_4:4892622-4892641 Msa0310030:intron 30.0%
! TATATATGTGTGATGGGATT+TGG + chr2_4:4892676-4892695 Msa0310030:intron 30.0%
TTGAAACTACACACAATTGA+AGG - chr2_4:4892746-4892765 None:intergenic 30.0%
TTGTGTGTAGTTTCAAATGT+CGG + chr2_4:4892750-4892769 Msa0310030:intron 30.0%
AAACAGGCCCATAATAAAAT+TGG + chr2_4:4893349-4893368 Msa0310030:intron 30.0%
AATTATACATGGAAGGTCAA+TGG - chr2_4:4893411-4893430 None:intergenic 30.0%
AGCATACAATTATACATGGA+AGG - chr2_4:4893418-4893437 None:intergenic 30.0%
TCCATGTATAATTGTATGCT+TGG + chr2_4:4893418-4893437 Msa0310030:intron 30.0%
CCATGTATAATTGTATGCTT+GGG + chr2_4:4893419-4893438 Msa0310030:intron 30.0%
GTTATTTGTATGAGAGTGAA+AGG - chr2_4:4893452-4893471 None:intergenic 30.0%
TTAGCAAGAAAATGTGTGAT+GGG - chr2_4:4893506-4893525 None:intergenic 30.0%
ATTAGCAAGAAAATGTGTGA+TGG - chr2_4:4893507-4893526 None:intergenic 30.0%
!!! GCTAAATATTTTGAGTTAGG+TGG + chr2_4:4893550-4893569 Msa0310030:intron 30.0%
!!! AAATATTTTGAGTTAGGTGG+TGG + chr2_4:4893553-4893572 Msa0310030:intron 30.0%
! CTTTTTGCACATGTTTTTCA+TGG + chr2_4:4894194-4894213 Msa0310030:intron 30.0%
!!! TTTTTGCAGTTTTGAATTGG+AGG + chr2_4:4894240-4894259 Msa0310030:intron 30.0%
!!! TTTTGCAGTTTTGAATTGGA+GGG + chr2_4:4894241-4894260 Msa0310030:intron 30.0%
ATTTCAATAGAGCTAACGAT+TGG - chr2_4:4894395-4894414 None:intergenic 30.0%
! ATGCTATCTTTATTTACTGC+TGG + chr2_4:4894458-4894477 Msa0310030:three_prime_UTR 30.0%
!! GAGTAGTGTTTTTATGGTGA+TGG + chr2_4:4889293-4889312 Msa0310030:CDS 35.0%
GTTCGGAGAGATAAGTTAAA+CGG + chr2_4:4889589-4889608 Msa0310030:intron 35.0%
TTCGGAGAGATAAGTTAAAC+GGG + chr2_4:4889590-4889609 Msa0310030:intron 35.0%
ACTTCTTATCCAATGTCTCA+AGG + chr2_4:4889786-4889805 Msa0310030:intron 35.0%
AAATAGTGTCCTTGAGACAT+TGG - chr2_4:4889798-4889817 None:intergenic 35.0%
! TGAACTTATCTCAGTTGGTA+GGG + chr2_4:4889946-4889965 Msa0310030:intron 35.0%
!!! TGTATTTTTTGATGGTGACC+GGG - chr2_4:4890009-4890028 None:intergenic 35.0%
!!! CTGTATTTTTTGATGGTGAC+CGG - chr2_4:4890010-4890029 None:intergenic 35.0%
TATCCTTAAGGCCACAAATT+AGG + chr2_4:4890277-4890296 Msa0310030:intron 35.0%
ATCCTTAAGGCCACAAATTA+GGG + chr2_4:4890278-4890297 Msa0310030:intron 35.0%
ACCTCACTTCAATTCTTCAA+AGG + chr2_4:4890775-4890794 Msa0310030:intron 35.0%
! ACCTTTGAAGAATTGAAGTG+AGG - chr2_4:4890779-4890798 None:intergenic 35.0%
TGTCCCATATACCAAAGTTA+CGG - chr2_4:4890922-4890941 None:intergenic 35.0%
TGTAGGCTAACTGATATCTT+CGG - chr2_4:4891230-4891249 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr2_4:4891452-4891471 Msa0310030:intron 35.0%
AATCGTTAAGCCATTGTCTA+AGG - chr2_4:4891628-4891647 None:intergenic 35.0%
GTGGAAATTTATTTGGTCGA+CGG + chr2_4:4891654-4891673 Msa0310030:intron 35.0%
AGTTAAATGCAGTATGAGTG+TGG + chr2_4:4891888-4891907 Msa0310030:intron 35.0%
TGATTCGTGTATGGAAATCA+TGG + chr2_4:4892151-4892170 Msa0310030:intron 35.0%
GATTCGTGTATGGAAATCAT+GGG + chr2_4:4892152-4892171 Msa0310030:intron 35.0%
GAACCAAGTGTACAACTAAA+TGG - chr2_4:4892285-4892304 None:intergenic 35.0%
TATATATGTGGGATGGGATT+TGG + chr2_4:4892358-4892377 Msa0310030:intron 35.0%
ACTAGAAATTATGGGGTTCT+TGG + chr2_4:4892420-4892439 Msa0310030:intron 35.0%
CTAGAAATTATGGGGTTCTT+GGG + chr2_4:4892421-4892440 Msa0310030:intron 35.0%
TTGGGTTCTATGATCATTTC+AGG + chr2_4:4892495-4892514 Msa0310030:CDS 35.0%
TGGGTTCTATGATCATTTCA+GGG + chr2_4:4892496-4892515 Msa0310030:CDS 35.0%
GTAGTTTCAAATGTCGGATA+CGG + chr2_4:4892756-4892775 Msa0310030:intron 35.0%
GAAGTTGGCAAAAGTAAAGA+AGG - chr2_4:4892981-4893000 None:intergenic 35.0%
GCATACCAAACATAGGATAT+TGG + chr2_4:4893077-4893096 Msa0310030:intron 35.0%
CATCACCAATATCCTATGTT+TGG - chr2_4:4893085-4893104 None:intergenic 35.0%
CTACACTATCTATCCAAACA+TGG - chr2_4:4893108-4893127 None:intergenic 35.0%
ACTTCTAGCATCTATGAAAC+AGG - chr2_4:4893214-4893233 None:intergenic 35.0%
CCCAAGCATACAATTATACA+TGG - chr2_4:4893422-4893441 None:intergenic 35.0%
AGGGGATGTATATAGTGAAA+GGG - chr2_4:4893474-4893493 None:intergenic 35.0%
! AGAAAATGTGTGATGGGAAT+GGG - chr2_4:4893500-4893519 None:intergenic 35.0%
! AAGAAAATGTGTGATGGGAA+TGG - chr2_4:4893501-4893520 None:intergenic 35.0%
!!! GGCGCTAAATATTTTGAGTT+AGG + chr2_4:4893547-4893566 Msa0310030:intron 35.0%
! GTTTGTCACATTTGATGACA+AGG + chr2_4:4893610-4893629 Msa0310030:CDS 35.0%
! ATTTGATGACAAGGAAGCAA+TGG + chr2_4:4893619-4893638 Msa0310030:CDS 35.0%
!! ATGAATGGAATTGACTTGGA+TGG + chr2_4:4893659-4893678 Msa0310030:CDS 35.0%
TACATAGACCTATTAGTTGC+TGG + chr2_4:4894487-4894506 Msa0310030:three_prime_UTR 35.0%
CTGTAAATCCAGCAACTAAT+AGG - chr2_4:4894498-4894517 None:intergenic 35.0%
GTTTGTCGAAAAGAGGTCTA+TGG + chr2_4:4889315-4889334 Msa0310030:intron 40.0%
TAAAGGCAGATGAAAAGGAG+AGG + chr2_4:4889411-4889430 Msa0310030:intron 40.0%
AGTTTCTTCCTAATCCCTCA+TGG + chr2_4:4889647-4889666 Msa0310030:intron 40.0%
TTCCTTAACCATTGCCATGA+GGG - chr2_4:4889664-4889683 None:intergenic 40.0%
ATTCCTTAACCATTGCCATG+AGG - chr2_4:4889665-4889684 None:intergenic 40.0%
TCTCGTGAACTTATCTCAGT+TGG + chr2_4:4889941-4889960 Msa0310030:intron 40.0%
GTGAACTTATCTCAGTTGGT+AGG + chr2_4:4889945-4889964 Msa0310030:intron 40.0%
!!! GTATTTTTTGATGGTGACCG+GGG - chr2_4:4890008-4890027 None:intergenic 40.0%
! TTCCCTAATTTGTGGCCTTA+AGG - chr2_4:4890283-4890302 None:intergenic 40.0%
!!! TGTATTTTGGTTGTCCGTTG+AGG + chr2_4:4890463-4890482 Msa0310030:intron 40.0%
ACATATGATTGGGGATGTTG+AGG - chr2_4:4890507-4890526 None:intergenic 40.0%
AATCAACTGCACCGTAACTT+TGG + chr2_4:4890908-4890927 Msa0310030:intron 40.0%
TGCACCGTAACTTTGGTATA+TGG + chr2_4:4890915-4890934 Msa0310030:intron 40.0%
GCACCGTAACTTTGGTATAT+GGG + chr2_4:4890916-4890935 Msa0310030:intron 40.0%
ACTGACGGTGAGGATTTATT+TGG - chr2_4:4891541-4891560 None:intergenic 40.0%
!! ACGTTTTGGCAAAAGACTGA+CGG - chr2_4:4891556-4891575 None:intergenic 40.0%
TGTGTATCCACCTTAGACAA+TGG + chr2_4:4891615-4891634 Msa0310030:intron 40.0%
!! TGGCTTAACGATTTTAACGG+TGG + chr2_4:4891635-4891654 Msa0310030:intron 40.0%
TCGACGGAAGATGACTTAAA+GGG + chr2_4:4891670-4891689 Msa0310030:intron 40.0%
TCTCGTATCGTCAGTTACTT+AGG - chr2_4:4891935-4891954 None:intergenic 40.0%
! AATTGAGCTTGAGCTTGTTC+CGG - chr2_4:4892003-4892022 None:intergenic 40.0%
TCCATCTACTCAGTACTCTT+AGG + chr2_4:4892029-4892048 Msa0310030:intron 40.0%
!! ACCTAAGAGTACTGAGTAGA+TGG - chr2_4:4892033-4892052 None:intergenic 40.0%
GATGAGTTTCGTTGCTTCAT+TGG + chr2_4:4892778-4892797 Msa0310030:CDS 40.0%
TATCAGAAGTTGACCATGCA+AGG - chr2_4:4892807-4892826 None:intergenic 40.0%
!! GATATTGGTGATGCCATGTT+TGG + chr2_4:4893092-4893111 Msa0310030:intron 40.0%
CAGGGGATGTATATAGTGAA+AGG - chr2_4:4893475-4893494 None:intergenic 40.0%
TGGTGGTTGACAAATTCTCT+GGG + chr2_4:4893570-4893589 Msa0310030:CDS 40.0%
GGCTATGAATGGAATTGACT+TGG + chr2_4:4893655-4893674 Msa0310030:CDS 40.0%
!! ATGGAATTGACTTGGATGGA+CGG + chr2_4:4893663-4893682 Msa0310030:CDS 40.0%
ATCTCTAGATCCTTGTGGTT+GGG - chr2_4:4893708-4893727 None:intergenic 40.0%
TCATCATCTCTAGATCCTTG+TGG - chr2_4:4893713-4893732 None:intergenic 40.0%
! TGCTTTAAGTGTGGTAAACC+CGG + chr2_4:4893821-4893840 Msa0310030:CDS 40.0%
!! TAAACCCGGTCATTTTGCAA+GGG + chr2_4:4893835-4893854 Msa0310030:CDS 40.0%
AGGGAAAGTAGATATAGTGG+TGG + chr2_4:4893899-4893918 Msa0310030:CDS 40.0%
AGTAGATATAGTGGTGGCTA+TGG + chr2_4:4893905-4893924 Msa0310030:CDS 40.0%
! TGATACCTCTAGCTTCATTG+AGG + chr2_4:4894148-4894167 Msa0310030:exon 40.0%
AAGTACCTCAATGAAGCTAG+AGG - chr2_4:4894156-4894175 None:intergenic 40.0%
! GGTGATGGTTTGTCGAAAAG+AGG + chr2_4:4889308-4889327 Msa0310030:CDS 45.0%
TGTCGAAAAGAGGTCTATGG+TGG + chr2_4:4889318-4889337 Msa0310030:intron 45.0%
TCGAGATCTAGCAGAGAAAG+TGG + chr2_4:4889341-4889360 Msa0310030:intron 45.0%
AGATCTAGCAGAGAAAGTGG+TGG + chr2_4:4889344-4889363 Msa0310030:intron 45.0%
TCATATGTTTCGACCGCCTT+TGG - chr2_4:4889461-4889480 Msa0310020:five_prime_UTR 45.0%
AAAGGCGGTCGAAACATATG+AGG + chr2_4:4889460-4889479 Msa0310030:CDS 45.0%
!! ACGGCTAGGGTTTGTTACAT+GGG + chr2_4:4889502-4889521 Msa0310030:CDS 45.0%
TTCCTAATCCCTCATGGCAA+TGG + chr2_4:4889653-4889672 Msa0310030:intron 45.0%
AACCATTGCCATGAGGGATT+AGG - chr2_4:4889658-4889677 None:intergenic 45.0%
ATCCCTCATGGCAATGGTTA+AGG + chr2_4:4889659-4889678 Msa0310030:intron 45.0%
!! ATCTCAGTTGGTAGGGACAA+TGG + chr2_4:4889953-4889972 Msa0310030:intron 45.0%
!! TTTTGGTTGTCCGTTGAGGA+TGG + chr2_4:4890467-4890486 Msa0310030:intron 45.0%
TTTGGTTGTCCGTTGAGGAT+GGG + chr2_4:4890468-4890487 Msa0310030:intron 45.0%
TTCAACATCCCCATCCTCAA+CGG - chr2_4:4890480-4890499 None:intergenic 45.0%
ATGATTGGGGATGTTGAGGA+TGG - chr2_4:4890503-4890522 None:intergenic 45.0%
TCAGTCAAGGCTCCAAACTA+AGG + chr2_4:4891302-4891321 Msa0310030:intron 45.0%
CTGCACACAACACCTTAGTT+TGG - chr2_4:4891317-4891336 None:intergenic 45.0%
!! CAAACTAAGGTGTTGTGTGC+AGG + chr2_4:4891315-4891334 Msa0310030:intron 45.0%
CGTTAAGCCATTGTCTAAGG+TGG - chr2_4:4891625-4891644 None:intergenic 45.0%
GTCGACGGAAGATGACTTAA+AGG + chr2_4:4891669-4891688 Msa0310030:intron 45.0%
! GGGATTTAGGGTATCAGTTG+TGG + chr2_4:4892516-4892535 Msa0310030:CDS 45.0%
GAGTTTCGTTGCTTCATTGG+TGG + chr2_4:4892781-4892800 Msa0310030:CDS 45.0%
!! AAAGTACGGCAAGCTTGTTG+AGG + chr2_4:4892849-4892868 Msa0310030:CDS 45.0%
GTGGTGGTTGACAAATTCTC+TGG + chr2_4:4893569-4893588 Msa0310030:CDS 45.0%
TGACAAGGAAGCAATGGAAG+AGG + chr2_4:4893625-4893644 Msa0310030:CDS 45.0%
AGCAATGGAAGAGGCTATTG+AGG + chr2_4:4893634-4893653 Msa0310030:CDS 45.0%
GAGGCTATTGAGGCTATGAA+TGG + chr2_4:4893644-4893663 Msa0310030:CDS 45.0%
! GTTGATAAAGCCCAACCACA+AGG + chr2_4:4893695-4893714 Msa0310030:CDS 45.0%
CATCTCTAGATCCTTGTGGT+TGG - chr2_4:4893709-4893728 None:intergenic 45.0%
AATCGTAGCCGAGATTATGG+AGG + chr2_4:4893773-4893792 Msa0310030:CDS 45.0%
CTCGACTACCTCCATAATCT+CGG - chr2_4:4893784-4893803 None:intergenic 45.0%
GAGATTATGGAGGTAGTCGA+GGG + chr2_4:4893783-4893802 Msa0310030:CDS 45.0%
!! GTAAACCCGGTCATTTTGCA+AGG + chr2_4:4893834-4893853 Msa0310030:CDS 45.0%
CTCCTCTTTCTCCTTCACTA+GGG - chr2_4:4893865-4893884 None:intergenic 45.0%
GGCAGGGAAAGTAGATATAG+TGG + chr2_4:4893896-4893915 Msa0310030:CDS 45.0%
AGGAATGCAGATCGCTCTTA+TGG + chr2_4:4893935-4893954 Msa0310030:CDS 45.0%
AATGCAGATCGCTCTTATGG+TGG + chr2_4:4893938-4893957 Msa0310030:CDS 45.0%
ATGCAGATCGCTCTTATGGT+GGG + chr2_4:4893939-4893958 Msa0310030:CDS 45.0%
!! GAAGCTAGAGGTATCAACGA+TGG - chr2_4:4894144-4894163 None:intergenic 45.0%
AGTTGCTGGATTTACAGCAG+TGG + chr2_4:4894501-4894520 Msa0310030:three_prime_UTR 45.0%
GTTGCTGGATTTACAGCAGT+GGG + chr2_4:4894502-4894521 Msa0310030:three_prime_UTR 45.0%
!! AGTGATGGTGGCACAACCAA+AGG + chr2_4:4889442-4889461 Msa0310030:CDS 50.0%
TAGCCGTGAACAGTGTACGA+CGG + chr2_4:4889483-4889502 Msa0310030:CDS 50.0%
TAGCCGTCGTACACTGTTCA+CGG - chr2_4:4889489-4889508 None:intergenic 50.0%
TGAACAGTGTACGACGGCTA+GGG + chr2_4:4889489-4889508 Msa0310030:CDS 50.0%
!! GACGGCTAGGGTTTGTTACA+TGG + chr2_4:4889501-4889520 Msa0310030:CDS 50.0%
TTGGTTGTCCGTTGAGGATG+GGG + chr2_4:4890469-4890488 Msa0310030:intron 50.0%
! TCAGTTAGCCTACAGCTGTG+TGG + chr2_4:4891236-4891255 Msa0310030:intron 50.0%
AGCCTACAGCTGTGTGGAAT+TGG + chr2_4:4891242-4891261 Msa0310030:intron 50.0%
GACCAATTCCACACAGCTGT+AGG - chr2_4:4891247-4891266 None:intergenic 50.0%
TTGGCAAAAGACTGACGGTG+AGG - chr2_4:4891551-4891570 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr2_4:4891952-4891971 Msa0310030:intron 50.0%
! AGAGAGGCGGAATCTGAAAC+AGG + chr2_4:4891968-4891987 Msa0310030:intron 50.0%
AAGCCATCCTAGAGAGCTTC+TGG + chr2_4:4893243-4893262 Msa0310030:intron 50.0%
! TGTCCAGAAGCTCTCTAGGA+TGG - chr2_4:4893249-4893268 None:intergenic 50.0%
GTCATGTCCAGAAGCTCTCT+AGG - chr2_4:4893253-4893272 None:intergenic 50.0%
! TGTGATGGGAATGGGATCAG+GGG - chr2_4:4893492-4893511 None:intergenic 50.0%
! GTGTGATGGGAATGGGATCA+GGG - chr2_4:4893493-4893512 None:intergenic 50.0%
! TGTGTGATGGGAATGGGATC+AGG - chr2_4:4893494-4893513 None:intergenic 50.0%
AAATTCTCTGGGCGTTCTCG+TGG + chr2_4:4893581-4893600 Msa0310030:CDS 50.0%
CGCAATCGTAGCCGAGATTA+TGG + chr2_4:4893770-4893789 Msa0310030:CDS 50.0%
CGAGATTATGGAGGTAGTCG+AGG + chr2_4:4893782-4893801 Msa0310030:CDS 50.0%
! GGCGGTGAATGCTTTAAGTG+TGG + chr2_4:4893812-4893831 Msa0310030:CDS 50.0%
CACTCCCTTGCAAAATGACC+GGG - chr2_4:4893842-4893861 None:intergenic 50.0%
GCACTCCCTTGCAAAATGAC+CGG - chr2_4:4893843-4893862 None:intergenic 50.0%
TGCCCTAGTGAAGGAGAAAG+AGG + chr2_4:4893860-4893879 Msa0310030:CDS 50.0%
CCTCCTCTTTCTCCTTCACT+AGG - chr2_4:4893866-4893885 None:intergenic 50.0%
CCTAGTGAAGGAGAAAGAGG+AGG + chr2_4:4893863-4893882 Msa0310030:CDS 50.0%
GTGAAGGAGAAAGAGGAGGA+AGG + chr2_4:4893867-4893886 Msa0310030:CDS 50.0%
GGAGAAAGAGGAGGAAGGTA+TGG + chr2_4:4893872-4893891 Msa0310030:CDS 50.0%
! GAAAGAGGAGGAAGGTATGG+TGG + chr2_4:4893875-4893894 Msa0310030:CDS 50.0%
GAGCGATCTGCATTCCTATC+AGG - chr2_4:4893932-4893951 None:intergenic 50.0%
GGAGAGGATGACGACAGTGA+TGG + chr2_4:4889427-4889446 Msa0310030:CDS 55.0%
GAGGATGACGACAGTGATGG+TGG + chr2_4:4889430-4889449 Msa0310030:CDS 55.0%
! GATGGTGGCACAACCAAAGG+CGG + chr2_4:4889445-4889464 Msa0310030:CDS 55.0%
GTGAACAGTGTACGACGGCT+AGG + chr2_4:4889488-4889507 Msa0310030:CDS 55.0%
AAAGTCCGGGGTTCAAACCC+CGG + chr2_4:4889988-4890007 Msa0310030:intron 55.0%
TATTCCAGCCGTGCGTTGCA+CGG + chr2_4:4891339-4891358 Msa0310030:intron 55.0%
GAGAGAGAGAGAGAGAGAGG+CGG + chr2_4:4891955-4891974 Msa0310030:intron 55.0%
! GCTTCATTGGTGGCCTTGCA+TGG + chr2_4:4892791-4892810 Msa0310030:CDS 55.0%
!! CGGCAAGCTTGTTGAGGCAA+AGG + chr2_4:4892855-4892874 Msa0310030:CDS 55.0%
! TCTGGGCGTTCTCGTGGTTT+TGG + chr2_4:4893587-4893606 Msa0310030:CDS 55.0%
! CTGGGCGTTCTCGTGGTTTT+GGG + chr2_4:4893588-4893607 Msa0310030:CDS 55.0%
GATGATCGTCACCGAGAACG+TGG + chr2_4:4893731-4893750 Msa0310030:CDS 55.0%
GTGAGTCACGACCACGTTCT+CGG - chr2_4:4893745-4893764 None:intergenic 55.0%
GGAGGTAGTCGAGGGTCTAA+TGG + chr2_4:4893791-4893810 Msa0310030:CDS 55.0%
GGTAGTCGAGGGTCTAATGG+CGG + chr2_4:4893794-4893813 Msa0310030:CDS 55.0%
! AGGAGGAAGGTATGGTGGCA+GGG + chr2_4:4893880-4893899 Msa0310030:CDS 55.0%
GTGGTGGCTATGGTCCTGAT+AGG + chr2_4:4893915-4893934 Msa0310030:CDS 55.0%
GGATTCTGGTGGTCGTGACA+GGG + chr2_4:4893970-4893989 Msa0310030:CDS 55.0%
!! GGATGGTGGTGGTCGTGATA+GGG + chr2_4:4893991-4894010 Msa0310030:CDS 55.0%
! GACGTGACAGAGATGGTGGT+GGG + chr2_4:4894023-4894042 Msa0310030:CDS 55.0%
CCAGATCCACGACGCTCATA+CGG - chr2_4:4894118-4894137 None:intergenic 55.0%
! TATGAGCGTCGTGGATCTGG+AGG + chr2_4:4894118-4894137 Msa0310030:CDS 55.0%
ATTCCAGCCGTGCGTTGCAC+GGG + chr2_4:4891340-4891359 Msa0310030:intron 60.0%
GTACGAACCCGTGCAACGCA+CGG - chr2_4:4891350-4891369 None:intergenic 60.0%
!! GCAAGGGAGTGCCCTAGTGA+AGG + chr2_4:4893851-4893870 Msa0310030:CDS 60.0%
! GAGGAGGAAGGTATGGTGGC+AGG + chr2_4:4893879-4893898 Msa0310030:CDS 60.0%
!! CTCTTATGGTGGGCGCGACA+GGG + chr2_4:4893949-4893968 Msa0310030:CDS 60.0%
GGGATTCTGGTGGTCGTGAC+AGG + chr2_4:4893969-4893988 Msa0310030:CDS 60.0%
TCTGGTGGTCGTGACAGGGA+TGG + chr2_4:4893974-4893993 Msa0310030:CDS 60.0%
!! GGGATGGTGGTGGTCGTGAT+AGG + chr2_4:4893990-4894009 Msa0310030:CDS 60.0%
! GGTGGTGGTCGTGATAGGGA+TGG + chr2_4:4893995-4894014 Msa0310030:CDS 60.0%
GGTGGTCGTGATAGGGATGG+CGG + chr2_4:4893998-4894017 Msa0310030:CDS 60.0%
GGTGGACGTGACAGAGATGG+TGG + chr2_4:4894019-4894038 Msa0310030:CDS 60.0%
! GGACGTGACAGAGATGGTGG+TGG + chr2_4:4894022-4894041 Msa0310030:CDS 60.0%
!! AGATGGTGGTGGGCGTGACA+GGG + chr2_4:4894033-4894052 Msa0310030:CDS 60.0%
!! GGATGGTGGTGGACGTGACA+GGG + chr2_4:4894054-4894073 Msa0310030:CDS 60.0%
! GACGTGACAGGGATGGTGGT+GGG + chr2_4:4894065-4894084 Msa0310030:CDS 60.0%
TGACAGGGATCGCGATCGTG+CGG + chr2_4:4894090-4894109 Msa0310030:CDS 60.0%
! CCGTATGAGCGTCGTGGATC+TGG + chr2_4:4894115-4894134 Msa0310030:CDS 60.0%
GGTGACCGGGGTTTGAACCC+CGG - chr2_4:4889996-4890015 None:intergenic 65.0%
!! GCTCTTATGGTGGGCGCGAC+AGG + chr2_4:4893948-4893967 Msa0310030:CDS 65.0%
GGTGGTCGTGACAGGGATGG+TGG + chr2_4:4893977-4893996 Msa0310030:CDS 65.0%
! GGTCGTGACAGGGATGGTGG+TGG + chr2_4:4893980-4893999 Msa0310030:CDS 65.0%
! GGTCGTGATAGGGATGGCGG+TGG + chr2_4:4894001-4894020 Msa0310030:CDS 65.0%
GGCGGTGGACGTGACAGAGA+TGG + chr2_4:4894016-4894035 Msa0310030:CDS 65.0%
!! GAGATGGTGGTGGGCGTGAC+AGG + chr2_4:4894032-4894051 Msa0310030:CDS 65.0%
!! GGGATGGTGGTGGACGTGAC+AGG + chr2_4:4894053-4894072 Msa0310030:CDS 65.0%
!! GGTGGTGGACGTGACAGGGA+TGG + chr2_4:4894058-4894077 Msa0310030:CDS 65.0%
GGTGGACGTGACAGGGATGG+TGG + chr2_4:4894061-4894080 Msa0310030:CDS 65.0%
! GGACGTGACAGGGATGGTGG+TGG + chr2_4:4894064-4894083 Msa0310030:CDS 65.0%
!! GGATGGTGGTGGGCGTGACA+GGG + chr2_4:4894075-4894094 Msa0310030:CDS 65.0%
GACAGGGATCGCGATCGTGC+GGG + chr2_4:4894091-4894110 Msa0310030:CDS 65.0%
GAACCCGTGCAACGCACGGC+TGG - chr2_4:4891346-4891365 None:intergenic 70.0%
CTGAAACAGGCGCGCGCGAC+CGG + chr2_4:4891981-4892000 Msa0310030:intron 70.0%
GGTGGGCGCGACAGGGATTC+TGG + chr2_4:4893956-4893975 Msa0310030:CDS 70.0%
GGGCGCGACAGGGATTCTGG+TGG + chr2_4:4893959-4893978 Msa0310030:CDS 70.0%
!! GGTGGTGGGCGTGACAGGGA+TGG + chr2_4:4894037-4894056 Msa0310030:CDS 70.0%
GGTGGGCGTGACAGGGATGG+TGG + chr2_4:4894040-4894059 Msa0310030:CDS 70.0%
! GGGCGTGACAGGGATGGTGG+TGG + chr2_4:4894043-4894062 Msa0310030:CDS 70.0%
!! GGGATGGTGGTGGGCGTGAC+AGG + chr2_4:4894074-4894093 Msa0310030:CDS 70.0%
! GCGGGACCGTATGAGCGTCG+TGG + chr2_4:4894109-4894128 Msa0310030:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 4889288 4894553 4889288 ID=Msa0310030;Name=Msa0310030
chr2_4 mRNA 4889288 4894553 4889288 ID=Msa0310030-mRNA-1;Parent=Msa0310030;Name=Msa0310030-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.4|0.5|0.5|0.8|0.66|6|324|324
chr2_4 exon 4889288 4889329 4889288 ID=Msa0310030-mRNA-1:exon:1674;Parent=Msa0310030-mRNA-1
chr2_4 exon 4889416 4889523 4889416 ID=Msa0310030-mRNA-1:exon:1675;Parent=Msa0310030-mRNA-1
chr2_4 exon 4892425 4892550 4892425 ID=Msa0310030-mRNA-1:exon:1676;Parent=Msa0310030-mRNA-1
chr2_4 exon 4892760 4892876 4892760 ID=Msa0310030-mRNA-1:exon:1677;Parent=Msa0310030-mRNA-1
chr2_4 exon 4893569 4894169 4893569 ID=Msa0310030-mRNA-1:exon:1678;Parent=Msa0310030-mRNA-1
chr2_4 exon 4894249 4894553 4894249 ID=Msa0310030-mRNA-1:exon:1679;Parent=Msa0310030-mRNA-1
chr2_4 CDS 4889288 4889329 4889288 ID=Msa0310030-mRNA-1:cds;Parent=Msa0310030-mRNA-1
chr2_4 CDS 4889416 4889523 4889416 ID=Msa0310030-mRNA-1:cds;Parent=Msa0310030-mRNA-1
chr2_4 CDS 4892425 4892550 4892425 ID=Msa0310030-mRNA-1:cds;Parent=Msa0310030-mRNA-1
chr2_4 CDS 4892760 4892876 4892760 ID=Msa0310030-mRNA-1:cds;Parent=Msa0310030-mRNA-1
chr2_4 CDS 4893569 4894150 4893569 ID=Msa0310030-mRNA-1:cds;Parent=Msa0310030-mRNA-1
chr2_4 three_prime_UTR 4894151 4894169 4894151 ID=Msa0310030-mRNA-1:three_prime_utr;Parent=Msa0310030-mRNA-1
chr2_4 three_prime_UTR 4894249 4894553 4894249 ID=Msa0310030-mRNA-1:three_prime_utr;Parent=Msa0310030-mRNA-1
Gene Sequence

>Msa0310030

ATGGAGAGTAGTGTTTTTATGGTGATGGTTTGTCGAAAAGAGGCAGATGAAAAGGAGAGGATGACGACAGTGATGGTGGCACAACCAAAGGCGGTCGAAACATATGAGGTAGCCGTGAACAGTGTACGACGGCTAGGGTTTGTTACATGGAAATTATGGGGTTCTTGGGTTTACTTTGATTTTAGCCCTAATGTTGAGAATTGTAATAAAGGTGATGTATTTGGGTTCTATGATCATTTCAGGGATTTAGGGTATCAGTTGTGGTTCTACATGACATTTCAAATGTCGGATACGGATGAGTTTCGTTGCTTCATTGGTGGCCTTGCATGGTCAACTTCTGATAGAAGATTAAAAGATGCATTTGAAAAGTACGGCAAGCTTGTTGAGGCAAAGGTGGTGGTTGACAAATTCTCTGGGCGTTCTCGTGGTTTTGGGTTTGTCACATTTGATGACAAGGAAGCAATGGAAGAGGCTATTGAGGCTATGAATGGAATTGACTTGGATGGACGGACTATTACTGTTGATAAAGCCCAACCACAAGGATCTAGAGATGATGATGATCGTCACCGAGAACGTGGTCGTGACTCACGTGATCGCAATCGTAGCCGAGATTATGGAGGTAGTCGAGGGTCTAATGGCGGTGAATGCTTTAAGTGTGGTAAACCCGGTCATTTTGCAAGGGAGTGCCCTAGTGAAGGAGAAAGAGGAGGAAGGTATGGTGGCAGGGAAAGTAGATATAGTGGTGGCTATGGTCCTGATAGGAATGCAGATCGCTCTTATGGTGGGCGCGACAGGGATTCTGGTGGTCGTGACAGGGATGGTGGTGGTCGTGATAGGGATGGCGGTGGACGTGACAGAGATGGTGGTGGGCGTGACAGGGATGGTGGTGGACGTGACAGGGATGGTGGTGGGCGTGACAGGGATCGCGATCGTGCGGGACCGTATGAGCGTCGTGGATCTGGAGGCCATCGTTGA
Protein sequence

>Msa0310030

MESSVFMVMVCRKEADEKERMTTVMVAQPKAVETYEVAVNSVRRLGFVTWKLWGSWVYFDFSPNVENCNKGDVFGFYDHFRDLGYQLWFYMTFQMSDTDEFRCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEAMNGIDLDGRTITVDKAQPQGSRDDDDRHRERGRDSRDRNRSRDYGGSRGSNGGECFKCGKPGHFARECPSEGERGGRYGGRESRYSGGYGPDRNADRSYGGRDRDSGGRDRDGGGRDRDGGGRDRDGGGRDRDGGGRDRDGGGRDRDRDRAGPYERRGSGGHR*