Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229760 | XP_003601535.2 | 92.500 | 200 | 2 | 1 | 1 | 187 | 1 | 200 | 2.55e-128 | 369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229760 | sp|C1A3Z5|RL13_GEMAT | 46.218 | 119 | 50 | 2 | 25 | 129 | 14 | 132 | 1.00e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229760 | G7J8V5 | 92.500 | 200 | 2 | 1 | 1 | 187 | 1 | 200 | 1.22e-128 | 369 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0229760 | 0.815474 | 9.073538e-52 | -8.615850e-47 |
| Msa0026130 | Msa0229760 | 0.804333 | 2.271390e-49 | -8.615850e-47 |
| Msa0027260 | Msa0229760 | 0.816461 | 5.465945e-52 | -8.615850e-47 |
| Msa0032260 | Msa0229760 | 0.807128 | 5.878917e-50 | -8.615850e-47 |
| Msa0034420 | Msa0229760 | 0.804972 | 1.671210e-49 | -8.615850e-47 |
| Msa0045490 | Msa0229760 | 0.802377 | 5.773838e-49 | -8.615850e-47 |
| Msa0046740 | Msa0229760 | 0.807410 | 5.123842e-50 | -8.615850e-47 |
| Msa0056470 | Msa0229760 | 0.841402 | 4.857703e-58 | -8.615850e-47 |
| Msa0064350 | Msa0229760 | 0.816536 | 5.257071e-52 | -8.615850e-47 |
| Msa0069330 | Msa0229760 | 0.824705 | 6.982719e-54 | -8.615850e-47 |
| Msa0076000 | Msa0229760 | 0.810196 | 1.299693e-50 | -8.615850e-47 |
| Msa0076040 | Msa0229760 | 0.810436 | 1.153582e-50 | -8.615850e-47 |
| Msa0082280 | Msa0229760 | 0.824303 | 8.682567e-54 | -8.615850e-47 |
| Msa0083070 | Msa0229760 | 0.808855 | 2.522981e-50 | -8.615850e-47 |
| Msa0090360 | Msa0229760 | 0.803331 | 3.668956e-49 | -8.615850e-47 |
| Msa0094470 | Msa0229760 | 0.827660 | 1.383754e-54 | -8.615850e-47 |
| Msa0104550 | Msa0229760 | 0.820293 | 7.404334e-53 | -8.615850e-47 |
| Msa0112790 | Msa0229760 | 0.802244 | 6.150001e-49 | -8.615850e-47 |
| Msa0115990 | Msa0229760 | 0.807264 | 5.502580e-50 | -8.615850e-47 |
| Msa0125450 | Msa0229760 | 0.811498 | 6.792784e-51 | -8.615850e-47 |
| Msa0125540 | Msa0229760 | 0.828601 | 8.213295e-55 | -8.615850e-47 |
| Msa0127310 | Msa0229760 | 0.812701 | 3.714397e-51 | -8.615850e-47 |
| Msa0128860 | Msa0229760 | 0.801759 | 7.736853e-49 | -8.615850e-47 |
| Msa0129060 | Msa0229760 | 0.827623 | 1.412300e-54 | -8.615850e-47 |
| Msa0140820 | Msa0229760 | 0.832866 | 7.402391e-56 | -8.615850e-47 |
| Msa0148060 | Msa0229760 | 0.813113 | 3.016685e-51 | -8.615850e-47 |
| Msa0149200 | Msa0229760 | 0.808984 | 2.366841e-50 | -8.615850e-47 |
| Msa0150570 | Msa0229760 | 0.811665 | 6.250426e-51 | -8.615850e-47 |
| Msa0166590 | Msa0229760 | 0.803730 | 3.032904e-49 | -8.615850e-47 |
| Msa0174730 | Msa0229760 | 0.802277 | 6.056371e-49 | -8.615850e-47 |
| Msa0174770 | Msa0229760 | 0.807859 | 4.115116e-50 | -8.615850e-47 |
| Msa0174860 | Msa0229760 | 0.801222 | 9.968929e-49 | -8.615850e-47 |
| Msa0181610 | Msa0229760 | 0.807886 | 4.060143e-50 | -8.615850e-47 |
| Msa0189700 | Msa0229760 | 0.818943 | 1.505481e-52 | -8.615850e-47 |
| Msa0191050 | Msa0229760 | 0.804915 | 1.717476e-49 | -8.615850e-47 |
| Msa0199690 | Msa0229760 | 0.800182 | 1.624664e-48 | -8.615850e-47 |
| Msa0199880 | Msa0229760 | 0.820767 | 5.763277e-53 | -8.615850e-47 |
| Msa0229760 | Msa0231980 | 0.809146 | 2.185946e-50 | -8.615850e-47 |
| Msa0229760 | Msa0232010 | 0.830971 | 2.174427e-55 | -8.615850e-47 |
| Msa0229760 | Msa0232080 | 0.829495 | 4.986783e-55 | -8.615850e-47 |
| Msa0229760 | Msa0233350 | 0.800073 | 1.710396e-48 | -8.615850e-47 |
| Msa0229760 | Msa0242230 | 0.805338 | 1.401040e-49 | -8.615850e-47 |
| Msa0229760 | Msa0267970 | 0.825108 | 5.610275e-54 | -8.615850e-47 |
| Msa0229760 | Msa0273900 | 0.809575 | 1.768121e-50 | -8.615850e-47 |
| Msa0229760 | Msa0280610 | 0.850653 | 1.477871e-60 | -8.615850e-47 |
| Msa0229760 | Msa0300120 | 0.820917 | 5.324809e-53 | -8.615850e-47 |
| Msa0229760 | Msa0310030 | 0.800037 | 1.738861e-48 | -8.615850e-47 |
| Msa0229760 | Msa0366890 | 0.825551 | 4.406463e-54 | -8.615850e-47 |
| Msa0229760 | Msa0369450 | 0.849490 | 3.127418e-60 | -8.615850e-47 |
| Msa0229760 | Msa0376300 | 0.824861 | 6.415977e-54 | -8.615850e-47 |
| Msa0229760 | Msa0376310 | 0.822094 | 2.846586e-53 | -8.615850e-47 |
| Msa0229760 | Msa0380300 | 0.833189 | 6.153155e-56 | -8.615850e-47 |
| Msa0229760 | Msa0387730 | 0.952801 | 1.105405e-110 | -8.615850e-47 |
| Msa0229760 | Msa0395820 | 0.810466 | 1.136457e-50 | -8.615850e-47 |
| Msa0229760 | Msa0403730 | 0.802984 | 4.327174e-49 | -8.615850e-47 |
| Msa0229760 | Msa0414800 | 0.801049 | 1.081729e-48 | -8.615850e-47 |
| Msa0229760 | Msa0425220 | 0.811738 | 6.025864e-51 | -8.615850e-47 |
| Msa0229760 | Msa0438690 | 0.842694 | 2.211570e-58 | -8.615850e-47 |
| Msa0229760 | Msa0468330 | 0.810337 | 1.211914e-50 | -8.615850e-47 |
| Msa0229760 | Msa0471590 | 0.812372 | 4.381732e-51 | -8.615850e-47 |
| Msa0229760 | Msa0481530 | 0.805302 | 1.425552e-49 | -8.615850e-47 |
| Msa0229760 | Msa0497490 | 0.820911 | 5.339679e-53 | -8.615850e-47 |
| Msa0229760 | Msa0518390 | 0.862542 | 4.709136e-64 | -8.615850e-47 |
| Msa0229760 | Msa0518450 | 0.847057 | 1.471469e-59 | -8.615850e-47 |
| Msa0229760 | Msa0521050 | 0.820936 | 5.269290e-53 | -8.615850e-47 |
| Msa0229760 | Msa0524500 | 0.839942 | 1.171642e-57 | -8.615850e-47 |
| Msa0229760 | Msa0552810 | 0.822160 | 2.748395e-53 | -8.615850e-47 |
| Msa0229760 | Msa0556060 | 0.803994 | 2.671851e-49 | -8.615850e-47 |
| Msa0229760 | Msa0557070 | 0.818716 | 1.695007e-52 | -8.615850e-47 |
| Msa0229760 | Msa0581070 | 0.821828 | 3.280671e-53 | -8.615850e-47 |
| Msa0229760 | Msa0581110 | 0.827836 | 1.255409e-54 | -8.615850e-47 |
| Msa0229760 | Msa0608320 | 0.802270 | 6.074476e-49 | -8.615850e-47 |
| Msa0229760 | Msa0621950 | 0.808146 | 3.574957e-50 | -8.615850e-47 |
| Msa0229760 | Msa0661300 | 0.840343 | 9.208697e-58 | -8.615850e-47 |
| Msa0229760 | Msa0662500 | 0.808163 | 3.545301e-50 | -8.615850e-47 |
| Msa0229760 | Msa0687630 | 0.802387 | 5.746311e-49 | -8.615850e-47 |
| Msa0229760 | Msa0690150 | 0.812160 | 4.875596e-51 | -8.615850e-47 |
| Msa0229760 | Msa0692840 | 0.851475 | 8.664907e-61 | -8.615850e-47 |
| Msa0229760 | Msa0692940 | 0.830919 | 2.238795e-55 | -8.615850e-47 |
| Msa0229760 | Msa0722020 | 0.817111 | 3.905583e-52 | -8.615850e-47 |
| Msa0229760 | Msa0746420 | 0.813491 | 2.491960e-51 | -8.615850e-47 |
| Msa0229760 | Msa0749760 | 0.833476 | 5.218259e-56 | -8.615850e-47 |
| Msa0229760 | Msa0750880 | 0.834622 | 2.694628e-56 | -8.615850e-47 |
| Msa0229760 | Msa0756260 | 0.805605 | 1.231238e-49 | -8.615850e-47 |
| Msa0229760 | Msa0761940 | 0.807125 | 5.888492e-50 | -8.615850e-47 |
| Msa0229760 | Msa0763020 | 0.817072 | 3.985295e-52 | -8.615850e-47 |
| Msa0229760 | Msa0763070 | 0.826397 | 2.773957e-54 | -8.615850e-47 |
| Msa0229760 | Msa0783790 | 0.823377 | 1.431565e-53 | -8.615850e-47 |
| Msa0229760 | Msa0784200 | 0.867179 | 1.656538e-65 | -8.615850e-47 |
| Msa0229760 | Msa0818310 | 0.877344 | 6.775781e-69 | -8.615850e-47 |
| Msa0229760 | Msa0858770 | 0.878722 | 2.231459e-69 | -8.615850e-47 |
| Msa0229760 | Msa0869100 | 0.810739 | 9.923822e-51 | -8.615850e-47 |
| Msa0229760 | Msa0881290 | 0.818707 | 1.702835e-52 | -8.615850e-47 |
| Msa0229760 | Msa0902760 | 0.843171 | 1.651268e-58 | -8.615850e-47 |
| Msa0229760 | Msa0968590 | 0.848164 | 7.298564e-60 | -8.615850e-47 |
| Msa0229760 | Msa0970030 | 0.822955 | 1.795742e-53 | -8.615850e-47 |
| Msa0229760 | Msa1006840 | 0.805338 | 1.400655e-49 | -8.615850e-47 |
| Msa0229760 | Msa1013400 | 0.846861 | 1.664675e-59 | -8.615850e-47 |
| Msa0229760 | Msa1019240 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa0229760 | Msa1019260 | 0.818642 | 1.762118e-52 | -8.615850e-47 |
| Msa0229760 | Msa1040400 | 0.804578 | 2.019435e-49 | -8.615850e-47 |
| Msa0229760 | Msa1050210 | 0.805306 | 1.422819e-49 | -8.615850e-47 |
| Msa0229760 | Msa1081150 | 0.818350 | 2.052689e-52 | -8.615850e-47 |
| Msa0229760 | Msa1081930 | 0.807847 | 4.138017e-50 | -8.615850e-47 |
| Msa0229760 | Msa1093530 | 0.843045 | 1.783905e-58 | -8.615850e-47 |
| Msa0229760 | Msa1101600 | 0.930522 | 1.448939e-93 | -8.615850e-47 |
| Msa0229760 | Msa1104140 | 0.814714 | 1.338658e-51 | -8.615850e-47 |
| Msa0229760 | Msa1119200 | 0.826027 | 3.397171e-54 | -8.615850e-47 |
| Msa0229760 | Msa1126510 | 0.861962 | 7.095251e-64 | -8.615850e-47 |
| Msa0229760 | Msa1126770 | 0.835360 | 1.756275e-56 | -8.615850e-47 |
| Msa0229760 | Msa1126830 | 0.823939 | 1.057085e-53 | -8.615850e-47 |
| Msa0229760 | Msa1127890 | 0.820481 | 6.706264e-53 | -8.615850e-47 |
| Msa0229760 | Msa1128600 | 0.810828 | 9.491463e-51 | -8.615850e-47 |
| Msa0229760 | Msa1130980 | 0.823241 | 1.539832e-53 | -8.615850e-47 |
| Msa0229760 | Msa1158570 | 0.815008 | 1.151675e-51 | -8.615850e-47 |
| Msa0229760 | Msa1165870 | 0.820755 | 5.798987e-53 | -8.615850e-47 |
| Msa0229760 | Msa1165940 | 0.875178 | 3.781930e-68 | -8.615850e-47 |
| Msa0229760 | Msa1166330 | 0.823331 | 1.467242e-53 | -8.615850e-47 |
| Msa0229760 | Msa1166340 | 0.807170 | 5.762042e-50 | -8.615850e-47 |
| Msa0229760 | Msa1166860 | 0.846663 | 1.885340e-59 | -8.615850e-47 |
| Msa0229760 | Msa1184370 | 0.802832 | 4.653377e-49 | -8.615850e-47 |
| Msa0229760 | Msa1187840 | 0.818640 | 1.764291e-52 | -8.615850e-47 |
| Msa0229760 | Msa1207270 | 0.832790 | 7.730365e-56 | -8.615850e-47 |
| Msa0229760 | Msa1218600 | 0.856349 | 3.416895e-62 | -8.615850e-47 |
| Msa0229760 | Msa1229320 | 0.807814 | 4.204885e-50 | -8.615850e-47 |
| Msa0229760 | Msa1239410 | 0.803224 | 3.861071e-49 | -8.615850e-47 |
| Msa0229760 | Msa1244600 | 0.803637 | 3.169822e-49 | -8.615850e-47 |
| Msa0229760 | Msa1251160 | 0.861429 | 1.032177e-63 | -8.615850e-47 |
| Msa0229760 | Msa1257510 | 0.845653 | 3.550405e-59 | -8.615850e-47 |
| Msa0229760 | Msa1283170 | 0.831899 | 1.284761e-55 | -8.615850e-47 |
| Msa0229760 | Msa1290450 | 0.801099 | 1.056376e-48 | -8.615850e-47 |
| Msa0229760 | Msa1292830 | 0.826788 | 2.237919e-54 | -8.615850e-47 |
| Msa0229760 | Msa1303250 | 0.800167 | 1.636738e-48 | -8.615850e-47 |
| Msa0229760 | Msa1305710 | 0.804285 | 2.324152e-49 | -8.615850e-47 |
| Msa0229760 | Msa1307950 | 0.818691 | 1.717468e-52 | -8.615850e-47 |
| Msa0229760 | Msa1321630 | 0.809549 | 1.791175e-50 | -8.615850e-47 |
| Msa0229760 | Msa1343260 | 0.815998 | 6.934232e-52 | -8.615850e-47 |
| Msa0229760 | Msa1353060 | 0.827985 | 1.156205e-54 | -8.615850e-47 |
| Msa0229760 | Msa1356440 | 0.825713 | 4.033775e-54 | -8.615850e-47 |
| Msa0229760 | Msa1361100 | 0.809025 | 2.319568e-50 | -8.615850e-47 |
| Msa0229760 | Msa1361410 | 0.801993 | 6.927894e-49 | -8.615850e-47 |
| Msa0229760 | Msa1366800 | 0.810919 | 9.072028e-51 | -8.615850e-47 |
| Msa0229760 | Msa1367590 | 0.838279 | 3.159549e-57 | -8.615850e-47 |
| Msa0229760 | Msa1370740 | 0.806335 | 8.649384e-50 | -8.615850e-47 |
| Msa0229760 | Msa1370860 | 0.820645 | 6.149670e-53 | -8.615850e-47 |
| Msa0229760 | Msa1371640 | 0.802964 | 4.368873e-49 | -8.615850e-47 |
| Msa0229760 | Msa1376200 | 0.811919 | 5.503248e-51 | -8.615850e-47 |
| Msa0229760 | Msa1376650 | 0.810163 | 1.321158e-50 | -8.615850e-47 |
| Msa0229760 | Msa1382780 | 0.813971 | 1.953881e-51 | -8.615850e-47 |
| Msa0229760 | Msa1387420 | 0.806124 | 9.578214e-50 | -8.615850e-47 |
| Msa0229760 | Msa1394290 | 0.805020 | 1.632626e-49 | -8.615850e-47 |
| Msa0229760 | Msa1407460 | 0.823684 | 1.213013e-53 | -8.615850e-47 |
| Msa0229760 | Msa1418340 | 0.824152 | 9.422321e-54 | -8.615850e-47 |
| Msa0229760 | Msa1433310 | 0.805370 | 1.379536e-49 | -8.615850e-47 |
| Msa0229760 | Msa1443780 | 0.834177 | 3.484178e-56 | -8.615850e-47 |
| Msa0229760 | Msa1450280 | 0.801685 | 8.011881e-49 | -8.615850e-47 |
| Msa0229760 | Msa1451560 | 0.806777 | 6.975603e-50 | -8.615850e-47 |
| Msa0229760 | Msa1457920 | 0.804535 | 2.061991e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229760 | MtrunA17_Chr3g0120801 | 92.500 | 200 | 2 | 1 | 1 | 187 | 1 | 200 | 2.35e-132 | 369 |
| Msa0229760 | MtrunA17_Chr8g0359571 | 35.043 | 117 | 63 | 1 | 26 | 129 | 104 | 220 | 2.75e-16 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0229760 | AT3G01790.1 | 75.281 | 178 | 31 | 1 | 8 | 172 | 14 | 191 | 9.58e-96 | 276 |
| Msa0229760 | AT3G01790.2 | 75.281 | 178 | 31 | 1 | 8 | 172 | 14 | 191 | 9.58e-96 | 276 |
| Msa0229760 | AT3G01790.3 | 73.333 | 120 | 19 | 1 | 8 | 114 | 14 | 133 | 1.69e-58 | 181 |
| Msa0229760 | AT1G78630.1 | 32.800 | 125 | 70 | 2 | 26 | 136 | 105 | 229 | 2.28e-14 | 69.3 |
Find 61 sgRNAs with CRISPR-Local
Find 544 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTCAATATGACATTTAT+AGG | 0.198923 | 2_2:-1594518 | None:intergenic |
| GGCATTCTAAAGGTACATTT+TGG | 0.202994 | 2_2:+1594674 | Msa0229760:three_prime_UTR |
| TTCGAACCAGACTACCATTT+TGG | 0.239078 | 2_2:+1594653 | Msa0229760:three_prime_UTR |
| CAGGGAAGATCCTTAATTTC+CGG | 0.312788 | 2_2:-1594236 | None:intergenic |
| ATCTTGATGGGCTCCGGTGG+CGG | 0.315099 | 2_2:+1591070 | Msa0229760:CDS |
| ATTAAACGCATTAATCTTGA+TGG | 0.336783 | 2_2:+1591057 | Msa0229760:CDS |
| TCAAATAGCTACTGTAGTTA+TGG | 0.345393 | 2_2:+1592289 | Msa0229760:CDS |
| AATAACATCTGTAGGGTCTT+TGG | 0.350210 | 2_2:-1592702 | None:intergenic |
| AGGACAGGGACCGGAAATTA+AGG | 0.354593 | 2_2:+1594226 | Msa0229760:intron |
| TCTTGATGGGCTCCGGTGGC+GGG | 0.385945 | 2_2:+1591071 | Msa0229760:CDS |
| AATGATTCGAGCACAGAAAA+AGG | 0.392832 | 2_2:+1594350 | Msa0229760:CDS |
| CAAATAGCTACTGTAGTTAT+GGG | 0.396768 | 2_2:+1592290 | Msa0229760:CDS |
| GTACCTTTAGAATGCCAAAA+TGG | 0.398968 | 2_2:-1594667 | None:intergenic |
| ATGTTCCTCATGCAGGTTCT+CGG | 0.405648 | 2_2:+1592254 | Msa0229760:intron |
| CCTGGTAGTGAGCACCCCTT+TGG | 0.427762 | 2_2:+1594255 | Msa0229760:CDS |
| ATATCTCCATCGTCACGATT+AGG | 0.431994 | 2_2:-1592335 | None:intergenic |
| AGAATGCCAAAATGGTAGTC+TGG | 0.442610 | 2_2:-1594659 | None:intergenic |
| AATCCTTACCTTGAGGTTGA+AGG | 0.443780 | 2_2:-1590872 | None:intergenic |
| TTGTCATTTGAATGAGAAGT+AGG | 0.447814 | 2_2:+1594470 | Msa0229760:three_prime_UTR |
| TTCTTAACAATGTTCTTACT+AGG | 0.456424 | 2_2:-1594574 | None:intergenic |
| CCAAAGGGGTGCTCACTACC+AGG | 0.457830 | 2_2:-1594255 | None:intergenic |
| CATACTATAAATTAAATTTG+AGG | 0.475654 | 2_2:-1590679 | None:intergenic |
| AGAAGAAGACGAAAGGATCT+TGG | 0.484347 | 2_2:+1590644 | Msa0229760:five_prime_UTR |
| ACATTCAGTCACCTGGCCCT+TGG | 0.487414 | 2_2:-1591103 | None:intergenic |
| GCCAAGGATATTGCTGTGAC+TGG | 0.487743 | 2_2:+1592374 | Msa0229760:CDS |
| CTCATCTCTCGTACTGTCCT+AGG | 0.490690 | 2_2:-1594309 | None:intergenic |
| GTCCTAGGAGGCATCACATA+AGG | 0.492669 | 2_2:-1594294 | None:intergenic |
| TGTTCCTCATGCAGGTTCTC+GGG | 0.496429 | 2_2:+1592255 | Msa0229760:intron |
| AACCTTATGTGATGCCTCCT+AGG | 0.498050 | 2_2:+1594292 | Msa0229760:CDS |
| GCTTTGCGAATAACATCTGT+AGG | 0.508354 | 2_2:-1592710 | None:intergenic |
| GCATTAATCTTGATGGGCTC+CGG | 0.515892 | 2_2:+1591064 | Msa0229760:CDS |
| GTGAGCACCCCTTTGGTGAT+CGG | 0.517843 | 2_2:+1594262 | Msa0229760:CDS |
| CCCAGTCACAGCAATATCCT+TGG | 0.518223 | 2_2:-1592375 | None:intergenic |
| TTCTAGTGGCCGATCACCAA+AGG | 0.519844 | 2_2:-1594271 | None:intergenic |
| AATGTATGTAGGACAGGGAC+CGG | 0.545065 | 2_2:+1594217 | Msa0229760:intron |
| TCTAGTGGCCGATCACCAAA+GGG | 0.547147 | 2_2:-1594270 | None:intergenic |
| AGCTACTGTAGTTATGGGAA+AGG | 0.547157 | 2_2:+1592295 | Msa0229760:CDS |
| TTAAACGCATTAATCTTGAT+GGG | 0.548352 | 2_2:+1591058 | Msa0229760:CDS |
| ATCATTGCACGCCTTGCTCG+TGG | 0.552038 | 2_2:-1594333 | None:intergenic |
| TGGCATCGAAAACCCGCCAC+CGG | 0.554361 | 2_2:-1591083 | None:intergenic |
| AAAGAGAAGAAGAAGACGAA+AGG | 0.559733 | 2_2:+1590637 | Msa0229760:five_prime_UTR |
| TCACGATTAGGAGTATAAGT+TGG | 0.572405 | 2_2:-1592323 | None:intergenic |
| GGTAAACTCCTTCAACCTCA+AGG | 0.594941 | 2_2:+1590864 | Msa0229760:CDS |
| CCTTAAGCAAAGAACTCTGA+AGG | 0.596688 | 2_2:+1592670 | Msa0229760:intron |
| CGGAAATTAAGGATCTTCCC+TGG | 0.598071 | 2_2:+1594237 | Msa0229760:CDS |
| AAGAACTCTGAAGGATCAGA+TGG | 0.606577 | 2_2:+1592679 | Msa0229760:CDS |
| TTAATCTTGATGGGCTCCGG+TGG | 0.608778 | 2_2:+1591067 | Msa0229760:CDS |
| GGCATCACATAAGGTTCTAG+TGG | 0.614175 | 2_2:-1594285 | None:intergenic |
| CTTTGCGAATAACATCTGTA+GGG | 0.616003 | 2_2:-1592709 | None:intergenic |
| TCCTCATGCAGGTTCTCGGG+AGG | 0.625821 | 2_2:+1592258 | Msa0229760:intron |
| TATACTCCTAATCGTGACGA+TGG | 0.626802 | 2_2:+1592329 | Msa0229760:CDS |
| CCAAGGATATTGCTGTGACT+GGG | 0.629076 | 2_2:+1592375 | Msa0229760:CDS |
| GAGAGATGAGACCACGAGCA+AGG | 0.633625 | 2_2:+1594322 | Msa0229760:CDS |
| AAATTAAATTTGAGGTACAA+CGG | 0.637186 | 2_2:-1590671 | None:intergenic |
| GTGCATTGTGCTTAATGCCA+AGG | 0.638542 | 2_2:+1592358 | Msa0229760:CDS |
| AGGATATTGCTGTGACTGGG+AGG | 0.647448 | 2_2:+1592378 | Msa0229760:CDS |
| TGGGAGGAAGCTGACAGACA+AGG | 0.650353 | 2_2:+1592394 | Msa0229760:CDS |
| ATCTCTCGTACTGTCCTAGG+AGG | 0.665987 | 2_2:-1594306 | None:intergenic |
| CAAAGGGGTGCTCACTACCA+GGG | 0.686267 | 2_2:-1594254 | None:intergenic |
| TGAGCAGCGACAGAATGCTG+AGG | 0.718134 | 2_2:+1594395 | Msa0229760:CDS |
| CTAGTGGCCGATCACCAAAG+GGG | 0.770452 | 2_2:-1594269 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTAAGTTTATTTTATTTT+AGG | + | chr2_2:1591815-1591834 | Msa0229760:intron | 10.0% |
| !! | TAAAATTATAAATACTACTT+TGG | - | chr2_2:1592481-1592500 | None:intergenic | 10.0% |
| !!! | AAAGTAGTATTTATAATTTT+AGG | + | chr2_2:1592480-1592499 | Msa0229760:intron | 10.0% |
| !!! | AAAATACAAATTTTTAAATC+AGG | + | chr2_2:1593158-1593177 | Msa0229760:intron | 10.0% |
| !!! | AAAAGTTTTTTAAGAAATTA+AGG | - | chr2_2:1593543-1593562 | None:intergenic | 10.0% |
| !! | ATAACTAATTAAAAAGAATA+AGG | - | chr2_2:1594147-1594166 | None:intergenic | 10.0% |
| !!! | CTTTAAGTTTATTTTATTTT+AGG | + | chr2_2:1591815-1591834 | Msa0229760:intron | 10.0% |
| !! | TAAAATTATAAATACTACTT+TGG | - | chr2_2:1592481-1592500 | None:intergenic | 10.0% |
| !!! | AAAGTAGTATTTATAATTTT+AGG | + | chr2_2:1592480-1592499 | Msa0229760:intron | 10.0% |
| !!! | AAAATACAAATTTTTAAATC+AGG | + | chr2_2:1593158-1593177 | Msa0229760:intron | 10.0% |
| !!! | AAAAGTTTTTTAAGAAATTA+AGG | - | chr2_2:1593543-1593562 | None:intergenic | 10.0% |
| !! | ATAACTAATTAAAAAGAATA+AGG | - | chr2_2:1594147-1594166 | None:intergenic | 10.0% |
| !! | CATACTATAAATTAAATTTG+AGG | - | chr2_2:1590682-1590701 | None:intergenic | 15.0% |
| !! | TATATCATAAATAATGACAA+GGG | - | chr2_2:1590907-1590926 | None:intergenic | 15.0% |
| !! | ACATTAAAATCATAATTTCA+TGG | - | chr2_2:1591131-1591150 | None:intergenic | 15.0% |
| !!! | ACATTTTGAAACAATTTATT+GGG | + | chr2_2:1592075-1592094 | Msa0229760:intron | 15.0% |
| !!! | TATAATTGTTGTTTTGTATA+TGG | + | chr2_2:1592572-1592591 | Msa0229760:intron | 15.0% |
| !!! | AAAGTATTGAATTAAATTAC+TGG | + | chr2_2:1592812-1592831 | Msa0229760:intron | 15.0% |
| !! | ATGAAAAAAAATAATCATTC+TGG | - | chr2_2:1592841-1592860 | None:intergenic | 15.0% |
| !!! | TGATTATTTTTTTTCATTGT+TGG | + | chr2_2:1592844-1592863 | Msa0229760:intron | 15.0% |
| !!! | TATTCTTTTGAATTGTAATT+TGG | - | chr2_2:1593245-1593264 | None:intergenic | 15.0% |
| !! | AAGAATAAAAGAAAATAATG+AGG | + | chr2_2:1593258-1593277 | Msa0229760:intron | 15.0% |
| !!! | AAATTTTTCACAATTGTAAA+CGG | + | chr2_2:1593312-1593331 | Msa0229760:intron | 15.0% |
| !! | TATATAAAATAAAATTCACC+AGG | + | chr2_2:1594009-1594028 | Msa0229760:intron | 15.0% |
| !! | CATACTATAAATTAAATTTG+AGG | - | chr2_2:1590682-1590701 | None:intergenic | 15.0% |
| !! | TATATCATAAATAATGACAA+GGG | - | chr2_2:1590907-1590926 | None:intergenic | 15.0% |
| !! | ACATTAAAATCATAATTTCA+TGG | - | chr2_2:1591131-1591150 | None:intergenic | 15.0% |
| !!! | ACATTTTGAAACAATTTATT+GGG | + | chr2_2:1592075-1592094 | Msa0229760:intron | 15.0% |
| !!! | TATAATTGTTGTTTTGTATA+TGG | + | chr2_2:1592572-1592591 | Msa0229760:intron | 15.0% |
| !!! | AAAGTATTGAATTAAATTAC+TGG | + | chr2_2:1592812-1592831 | Msa0229760:intron | 15.0% |
| !! | ATGAAAAAAAATAATCATTC+TGG | - | chr2_2:1592841-1592860 | None:intergenic | 15.0% |
| !!! | TGATTATTTTTTTTCATTGT+TGG | + | chr2_2:1592844-1592863 | Msa0229760:intron | 15.0% |
| !!! | TATTCTTTTGAATTGTAATT+TGG | - | chr2_2:1593245-1593264 | None:intergenic | 15.0% |
| !! | AAGAATAAAAGAAAATAATG+AGG | + | chr2_2:1593258-1593277 | Msa0229760:intron | 15.0% |
| !!! | AAATTTTTCACAATTGTAAA+CGG | + | chr2_2:1593312-1593331 | Msa0229760:intron | 15.0% |
| !! | TATATAAAATAAAATTCACC+AGG | + | chr2_2:1594009-1594028 | Msa0229760:intron | 15.0% |
| !!! | AAATTAAATTTGAGGTACAA+CGG | - | chr2_2:1590674-1590693 | None:intergenic | 20.0% |
| !!! | TATTTTTTTGAATAGGAAGA+AGG | + | chr2_2:1590809-1590828 | Msa0229760:intron | 20.0% |
| !! | ATATCATAAATAATGACAAG+GGG | - | chr2_2:1590906-1590925 | None:intergenic | 20.0% |
| !! | CTATATCATAAATAATGACA+AGG | - | chr2_2:1590908-1590927 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTTGAAGTATG+TGG | + | chr2_2:1591157-1591176 | Msa0229760:intron | 20.0% |
| !! | ATGAAAATATTAGAGAGATT+TGG | + | chr2_2:1591501-1591520 | Msa0229760:intron | 20.0% |
| !! | TGAAAATATTAGAGAGATTT+GGG | + | chr2_2:1591502-1591521 | Msa0229760:intron | 20.0% |
| !!! | GACATTTTGAAACAATTTAT+TGG | + | chr2_2:1592074-1592093 | Msa0229760:intron | 20.0% |
| !! | CAAAACAACAATTATAAAAC+TGG | - | chr2_2:1592568-1592587 | None:intergenic | 20.0% |
| !!! | TTTTTCTATGGATTCTAAAA+TGG | + | chr2_2:1593406-1593425 | Msa0229760:intron | 20.0% |
| !!! | TTGCCCAATTTTTTAAAATT+CGG | + | chr2_2:1593710-1593729 | Msa0229760:intron | 20.0% |
| !!! | TTGTTTCTTCTTTTTATCAT+AGG | + | chr2_2:1593902-1593921 | Msa0229760:intron | 20.0% |
| !!! | AAATTAAATTTGAGGTACAA+CGG | - | chr2_2:1590674-1590693 | None:intergenic | 20.0% |
| !!! | TATTTTTTTGAATAGGAAGA+AGG | + | chr2_2:1590809-1590828 | Msa0229760:intron | 20.0% |
| !! | ATATCATAAATAATGACAAG+GGG | - | chr2_2:1590906-1590925 | None:intergenic | 20.0% |
| !! | CTATATCATAAATAATGACA+AGG | - | chr2_2:1590908-1590927 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTTGAAGTATG+TGG | + | chr2_2:1591157-1591176 | Msa0229760:intron | 20.0% |
| !! | ATGAAAATATTAGAGAGATT+TGG | + | chr2_2:1591501-1591520 | Msa0229760:intron | 20.0% |
| !! | TGAAAATATTAGAGAGATTT+GGG | + | chr2_2:1591502-1591521 | Msa0229760:intron | 20.0% |
| !!! | GACATTTTGAAACAATTTAT+TGG | + | chr2_2:1592074-1592093 | Msa0229760:intron | 20.0% |
| !! | CAAAACAACAATTATAAAAC+TGG | - | chr2_2:1592568-1592587 | None:intergenic | 20.0% |
| !!! | TTTTTCTATGGATTCTAAAA+TGG | + | chr2_2:1593406-1593425 | Msa0229760:intron | 20.0% |
| !!! | TTGCCCAATTTTTTAAAATT+CGG | + | chr2_2:1593710-1593729 | Msa0229760:intron | 20.0% |
| !!! | TTGTTTCTTCTTTTTATCAT+AGG | + | chr2_2:1593902-1593921 | Msa0229760:intron | 20.0% |
| !!! | GTTAAAAATGGAGTCTTTTT+TGG | + | chr2_2:1590982-1591001 | Msa0229760:intron | 25.0% |
| ! | ATTAAACGCATTAATCTTGA+TGG | + | chr2_2:1591057-1591076 | Msa0229760:CDS | 25.0% |
| ! | TTAAACGCATTAATCTTGAT+GGG | + | chr2_2:1591058-1591077 | Msa0229760:CDS | 25.0% |
| ! | TAGACTTGTAGAATATCTTA+TGG | + | chr2_2:1591199-1591218 | Msa0229760:intron | 25.0% |
| !!! | TATCTTATGGTTTTACGTTT+TGG | + | chr2_2:1591212-1591231 | Msa0229760:intron | 25.0% |
| ! | AGAATAAAATGCGAGATAAT+AGG | + | chr2_2:1591246-1591265 | Msa0229760:intron | 25.0% |
| ! | GAGATAATAGGTTTATGAAA+TGG | + | chr2_2:1591258-1591277 | Msa0229760:intron | 25.0% |
| ! | TATAGTATTCACATCTGTAT+TGG | - | chr2_2:1591410-1591429 | None:intergenic | 25.0% |
| !!! | ATAGTTTCTCTAGTTTTTCT+AGG | - | chr2_2:1591663-1591682 | None:intergenic | 25.0% |
| !!! | GGATACAACACATTTTAATT+AGG | - | chr2_2:1591849-1591868 | None:intergenic | 25.0% |
| !! | GTTTTACATTTGTCCTTTTT+AGG | + | chr2_2:1591872-1591891 | Msa0229760:intron | 25.0% |
| ! | TGAAAAGTTATCCTCATAAT+AGG | + | chr2_2:1591895-1591914 | Msa0229760:intron | 25.0% |
| ! | AAGTAATTAGTTACTTCTCT+TGG | + | chr2_2:1592021-1592040 | Msa0229760:intron | 25.0% |
| ! | TTGAGCCATGAATTATTTAT+TGG | + | chr2_2:1592048-1592067 | Msa0229760:intron | 25.0% |
| ! | TAGGCTTCTTATAAATCAAA+TGG | + | chr2_2:1592499-1592518 | Msa0229760:intron | 25.0% |
| !! | GGTAAAATTTCTAAGAAGAT+AGG | - | chr2_2:1592544-1592563 | None:intergenic | 25.0% |
| ! | AACAACAATTATAAAACTGG+AGG | - | chr2_2:1592565-1592584 | None:intergenic | 25.0% |
| !! | ACTTTATAGACCAATGTTTT+TGG | + | chr2_2:1592776-1592795 | Msa0229760:intron | 25.0% |
| !!! | AAAAGCATTTCCAAAAACAT+TGG | - | chr2_2:1592789-1592808 | None:intergenic | 25.0% |
| ! | GTATTGAATTAAATTACTGG+TGG | + | chr2_2:1592815-1592834 | Msa0229760:intron | 25.0% |
| !!! | TTCTATTTTTGGTCTCAAAT+AGG | - | chr2_2:1592893-1592912 | None:intergenic | 25.0% |
| !! | TGTTCGGAATTTTCTATTTT+TGG | - | chr2_2:1592904-1592923 | None:intergenic | 25.0% |
| !!! | TTAGGGTCTTTTGATTATTT+TGG | - | chr2_2:1593138-1593157 | None:intergenic | 25.0% |
| ! | ATCCATTCTAAACTGTAAAT+TGG | + | chr2_2:1593465-1593484 | Msa0229760:intron | 25.0% |
| ! | TCCATTCTAAACTGTAAATT+GGG | + | chr2_2:1593466-1593485 | Msa0229760:intron | 25.0% |
| ! | TTTGTTACATTATTCAAGCA+AGG | - | chr2_2:1593591-1593610 | None:intergenic | 25.0% |
| ! | TAGGAATGTTAATTATGCTA+TGG | - | chr2_2:1593632-1593651 | None:intergenic | 25.0% |
| !! | AATTCTTCAAGTTCATCATT+AGG | - | chr2_2:1593651-1593670 | None:intergenic | 25.0% |
| !! | CTTGAAGAATTACATTTTAG+AGG | + | chr2_2:1593660-1593679 | Msa0229760:intron | 25.0% |
| !!! | TGCCCAATTTTTTAAAATTC+GGG | + | chr2_2:1593711-1593730 | Msa0229760:intron | 25.0% |
| ! | ATACTACTCAAGTTAAACAT+TGG | - | chr2_2:1593930-1593949 | None:intergenic | 25.0% |
| ! | TTTCGATTATGAAAGAAAGA+AGG | + | chr2_2:1593961-1593980 | Msa0229760:intron | 25.0% |
| ! | TTCGATTATGAAAGAAAGAA+GGG | + | chr2_2:1593962-1593981 | Msa0229760:intron | 25.0% |
| ! | ATAAGCTATAACAAGATGAA+AGG | - | chr2_2:1594123-1594142 | None:intergenic | 25.0% |
| ! | ATGCAATATTGAAGAATTGA+TGG | + | chr2_2:1594165-1594184 | Msa0229760:intron | 25.0% |
| ! | CAACTCAATATGACATTTAT+AGG | - | chr2_2:1594521-1594540 | None:intergenic | 25.0% |
| ! | TTCTTAACAATGTTCTTACT+AGG | - | chr2_2:1594577-1594596 | None:intergenic | 25.0% |
| !!! | GTTAAAAATGGAGTCTTTTT+TGG | + | chr2_2:1590982-1591001 | Msa0229760:intron | 25.0% |
| ! | ATTAAACGCATTAATCTTGA+TGG | + | chr2_2:1591057-1591076 | Msa0229760:CDS | 25.0% |
| ! | TTAAACGCATTAATCTTGAT+GGG | + | chr2_2:1591058-1591077 | Msa0229760:CDS | 25.0% |
| ! | TAGACTTGTAGAATATCTTA+TGG | + | chr2_2:1591199-1591218 | Msa0229760:intron | 25.0% |
| !!! | TATCTTATGGTTTTACGTTT+TGG | + | chr2_2:1591212-1591231 | Msa0229760:intron | 25.0% |
| ! | AGAATAAAATGCGAGATAAT+AGG | + | chr2_2:1591246-1591265 | Msa0229760:intron | 25.0% |
| ! | GAGATAATAGGTTTATGAAA+TGG | + | chr2_2:1591258-1591277 | Msa0229760:intron | 25.0% |
| ! | TATAGTATTCACATCTGTAT+TGG | - | chr2_2:1591410-1591429 | None:intergenic | 25.0% |
| !!! | ATAGTTTCTCTAGTTTTTCT+AGG | - | chr2_2:1591663-1591682 | None:intergenic | 25.0% |
| !!! | GGATACAACACATTTTAATT+AGG | - | chr2_2:1591849-1591868 | None:intergenic | 25.0% |
| !! | GTTTTACATTTGTCCTTTTT+AGG | + | chr2_2:1591872-1591891 | Msa0229760:intron | 25.0% |
| ! | TGAAAAGTTATCCTCATAAT+AGG | + | chr2_2:1591895-1591914 | Msa0229760:intron | 25.0% |
| ! | AAGTAATTAGTTACTTCTCT+TGG | + | chr2_2:1592021-1592040 | Msa0229760:intron | 25.0% |
| ! | TTGAGCCATGAATTATTTAT+TGG | + | chr2_2:1592048-1592067 | Msa0229760:intron | 25.0% |
| ! | TAGGCTTCTTATAAATCAAA+TGG | + | chr2_2:1592499-1592518 | Msa0229760:intron | 25.0% |
| !! | GGTAAAATTTCTAAGAAGAT+AGG | - | chr2_2:1592544-1592563 | None:intergenic | 25.0% |
| ! | AACAACAATTATAAAACTGG+AGG | - | chr2_2:1592565-1592584 | None:intergenic | 25.0% |
| !! | ACTTTATAGACCAATGTTTT+TGG | + | chr2_2:1592776-1592795 | Msa0229760:intron | 25.0% |
| !!! | AAAAGCATTTCCAAAAACAT+TGG | - | chr2_2:1592789-1592808 | None:intergenic | 25.0% |
| ! | GTATTGAATTAAATTACTGG+TGG | + | chr2_2:1592815-1592834 | Msa0229760:intron | 25.0% |
| !!! | TTCTATTTTTGGTCTCAAAT+AGG | - | chr2_2:1592893-1592912 | None:intergenic | 25.0% |
| !! | TGTTCGGAATTTTCTATTTT+TGG | - | chr2_2:1592904-1592923 | None:intergenic | 25.0% |
| !!! | TTAGGGTCTTTTGATTATTT+TGG | - | chr2_2:1593138-1593157 | None:intergenic | 25.0% |
| ! | ATCCATTCTAAACTGTAAAT+TGG | + | chr2_2:1593465-1593484 | Msa0229760:intron | 25.0% |
| ! | TCCATTCTAAACTGTAAATT+GGG | + | chr2_2:1593466-1593485 | Msa0229760:intron | 25.0% |
| ! | TTTGTTACATTATTCAAGCA+AGG | - | chr2_2:1593591-1593610 | None:intergenic | 25.0% |
| ! | TAGGAATGTTAATTATGCTA+TGG | - | chr2_2:1593632-1593651 | None:intergenic | 25.0% |
| !! | AATTCTTCAAGTTCATCATT+AGG | - | chr2_2:1593651-1593670 | None:intergenic | 25.0% |
| !! | CTTGAAGAATTACATTTTAG+AGG | + | chr2_2:1593660-1593679 | Msa0229760:intron | 25.0% |
| !!! | TGCCCAATTTTTTAAAATTC+GGG | + | chr2_2:1593711-1593730 | Msa0229760:intron | 25.0% |
| ! | ATACTACTCAAGTTAAACAT+TGG | - | chr2_2:1593930-1593949 | None:intergenic | 25.0% |
| ! | TTTCGATTATGAAAGAAAGA+AGG | + | chr2_2:1593961-1593980 | Msa0229760:intron | 25.0% |
| ! | TTCGATTATGAAAGAAAGAA+GGG | + | chr2_2:1593962-1593981 | Msa0229760:intron | 25.0% |
| ! | ATAAGCTATAACAAGATGAA+AGG | - | chr2_2:1594123-1594142 | None:intergenic | 25.0% |
| ! | ATGCAATATTGAAGAATTGA+TGG | + | chr2_2:1594165-1594184 | Msa0229760:intron | 25.0% |
| ! | CAACTCAATATGACATTTAT+AGG | - | chr2_2:1594521-1594540 | None:intergenic | 25.0% |
| ! | TTCTTAACAATGTTCTTACT+AGG | - | chr2_2:1594577-1594596 | None:intergenic | 25.0% |
| GAAATAGAGTGTAGAAACAT+AGG | - | chr2_2:1590753-1590772 | None:intergenic | 30.0% | |
| ! | ATCTGAAGCAAAAATGAAGA+TGG | + | chr2_2:1590843-1590862 | Msa0229760:exon | 30.0% |
| TTTGAAAAATCCTTACCTTG+AGG | - | chr2_2:1590882-1590901 | None:intergenic | 30.0% | |
| !! | TGTTCTGGGTTAGTTAAAAA+TGG | + | chr2_2:1590970-1590989 | Msa0229760:intron | 30.0% |
| GTACTAGTTAAAGAACAGTA+AGG | + | chr2_2:1591328-1591347 | Msa0229760:intron | 30.0% | |
| ATGCCTATGTCTATATTGAA+TGG | + | chr2_2:1591458-1591477 | Msa0229760:intron | 30.0% | |
| TGATAGAAACTAGACTTAAG+TGG | + | chr2_2:1591547-1591566 | Msa0229760:intron | 30.0% | |
| AAAGGACAAATGTAAAACAG+TGG | - | chr2_2:1591870-1591889 | None:intergenic | 30.0% | |
| ! | GGATAACTTTTCACCTAAAA+AGG | - | chr2_2:1591888-1591907 | None:intergenic | 30.0% |
| AATTGGCTATTCCTATTATG+AGG | - | chr2_2:1591909-1591928 | None:intergenic | 30.0% | |
| GTCTAGATTATGAGTGAAAT+TGG | - | chr2_2:1591926-1591945 | None:intergenic | 30.0% | |
| AATTAGTTACTTCTCTTGGA+AGG | + | chr2_2:1592025-1592044 | Msa0229760:intron | 30.0% | |
| AGCCATGAATTATTTATTGG+CGG | + | chr2_2:1592051-1592070 | Msa0229760:intron | 30.0% | |
| TTCATAAAATGTCCAAAGCT+CGG | - | chr2_2:1592147-1592166 | None:intergenic | 30.0% | |
| TCAAATAGCTACTGTAGTTA+TGG | + | chr2_2:1592289-1592308 | Msa0229760:CDS | 30.0% | |
| CAAATAGCTACTGTAGTTAT+GGG | + | chr2_2:1592290-1592309 | Msa0229760:CDS | 30.0% | |
| TGAATAATGCCAAAAGATTG+TGG | - | chr2_2:1592607-1592626 | None:intergenic | 30.0% | |
| ACTATTCTGACATAAAGTAG+TGG | + | chr2_2:1592628-1592647 | Msa0229760:intron | 30.0% | |
| !!! | ACATCACGTAAGTTGTTTTT+AGG | - | chr2_2:1592752-1592771 | None:intergenic | 30.0% |
| TTAGACTTGATTCTTATGGT+AGG | - | chr2_2:1592978-1592997 | None:intergenic | 30.0% | |
| TACCATAAGAATCAAGTCTA+AGG | + | chr2_2:1592977-1592996 | Msa0229760:intron | 30.0% | |
| TTCCTTAGACTTGATTCTTA+TGG | - | chr2_2:1592982-1593001 | None:intergenic | 30.0% | |
| TGGAGAACAAAATTGAACTT+GGG | + | chr2_2:1593024-1593043 | Msa0229760:intron | 30.0% | |
| !!! | CACTGTTTTGAAAAACCATT+AGG | - | chr2_2:1593056-1593075 | None:intergenic | 30.0% |
| ! | TTGTTATAATGCTACTTGCA+GGG | - | chr2_2:1593079-1593098 | None:intergenic | 30.0% |
| AGTAGCATTATAACAACTTG+TGG | + | chr2_2:1593083-1593102 | Msa0229760:intron | 30.0% | |
| TCTTATAGTCTAACCCATAA+AGG | + | chr2_2:1593202-1593221 | Msa0229760:intron | 30.0% | |
| TTGCTCATATTAGATTGATG+TGG | - | chr2_2:1593517-1593536 | None:intergenic | 30.0% | |
| ATTATTCAAGCAAGGTTTAC+CGG | - | chr2_2:1593583-1593602 | None:intergenic | 30.0% | |
| !!! | GCCCAATTTTTTAAAATTCG+GGG | + | chr2_2:1593712-1593731 | Msa0229760:intron | 30.0% |
| !! | GCCCCGAATTTTAAAAAATT+GGG | - | chr2_2:1593716-1593735 | None:intergenic | 30.0% |
| !! | TGCCCCGAATTTTAAAAAAT+TGG | - | chr2_2:1593717-1593736 | None:intergenic | 30.0% |
| GAAACAACAAATCATGAAGT+TGG | - | chr2_2:1593889-1593908 | None:intergenic | 30.0% | |
| GAAAACAATTCTTGAGCAAT+AGG | - | chr2_2:1594072-1594091 | None:intergenic | 30.0% | |
| GCATTATTGCTAATGTATGT+AGG | + | chr2_2:1594206-1594225 | Msa0229760:intron | 30.0% | |
| ! | TTGTCATTTGAATGAGAAGT+AGG | + | chr2_2:1594470-1594489 | Msa0229760:three_prime_UTR | 30.0% |
| GAAATAGAGTGTAGAAACAT+AGG | - | chr2_2:1590753-1590772 | None:intergenic | 30.0% | |
| ! | ATCTGAAGCAAAAATGAAGA+TGG | + | chr2_2:1590843-1590862 | Msa0229760:exon | 30.0% |
| TTTGAAAAATCCTTACCTTG+AGG | - | chr2_2:1590882-1590901 | None:intergenic | 30.0% | |
| !! | TGTTCTGGGTTAGTTAAAAA+TGG | + | chr2_2:1590970-1590989 | Msa0229760:intron | 30.0% |
| GTACTAGTTAAAGAACAGTA+AGG | + | chr2_2:1591328-1591347 | Msa0229760:intron | 30.0% | |
| ATGCCTATGTCTATATTGAA+TGG | + | chr2_2:1591458-1591477 | Msa0229760:intron | 30.0% | |
| TGATAGAAACTAGACTTAAG+TGG | + | chr2_2:1591547-1591566 | Msa0229760:intron | 30.0% | |
| AAAGGACAAATGTAAAACAG+TGG | - | chr2_2:1591870-1591889 | None:intergenic | 30.0% | |
| ! | GGATAACTTTTCACCTAAAA+AGG | - | chr2_2:1591888-1591907 | None:intergenic | 30.0% |
| AATTGGCTATTCCTATTATG+AGG | - | chr2_2:1591909-1591928 | None:intergenic | 30.0% | |
| GTCTAGATTATGAGTGAAAT+TGG | - | chr2_2:1591926-1591945 | None:intergenic | 30.0% | |
| AATTAGTTACTTCTCTTGGA+AGG | + | chr2_2:1592025-1592044 | Msa0229760:intron | 30.0% | |
| AGCCATGAATTATTTATTGG+CGG | + | chr2_2:1592051-1592070 | Msa0229760:intron | 30.0% | |
| TTCATAAAATGTCCAAAGCT+CGG | - | chr2_2:1592147-1592166 | None:intergenic | 30.0% | |
| TCAAATAGCTACTGTAGTTA+TGG | + | chr2_2:1592289-1592308 | Msa0229760:CDS | 30.0% | |
| CAAATAGCTACTGTAGTTAT+GGG | + | chr2_2:1592290-1592309 | Msa0229760:CDS | 30.0% | |
| TGAATAATGCCAAAAGATTG+TGG | - | chr2_2:1592607-1592626 | None:intergenic | 30.0% | |
| ACTATTCTGACATAAAGTAG+TGG | + | chr2_2:1592628-1592647 | Msa0229760:intron | 30.0% | |
| !!! | ACATCACGTAAGTTGTTTTT+AGG | - | chr2_2:1592752-1592771 | None:intergenic | 30.0% |
| TTAGACTTGATTCTTATGGT+AGG | - | chr2_2:1592978-1592997 | None:intergenic | 30.0% | |
| TACCATAAGAATCAAGTCTA+AGG | + | chr2_2:1592977-1592996 | Msa0229760:intron | 30.0% | |
| TTCCTTAGACTTGATTCTTA+TGG | - | chr2_2:1592982-1593001 | None:intergenic | 30.0% | |
| TGGAGAACAAAATTGAACTT+GGG | + | chr2_2:1593024-1593043 | Msa0229760:intron | 30.0% | |
| !!! | CACTGTTTTGAAAAACCATT+AGG | - | chr2_2:1593056-1593075 | None:intergenic | 30.0% |
| ! | TTGTTATAATGCTACTTGCA+GGG | - | chr2_2:1593079-1593098 | None:intergenic | 30.0% |
| AGTAGCATTATAACAACTTG+TGG | + | chr2_2:1593083-1593102 | Msa0229760:intron | 30.0% | |
| TCTTATAGTCTAACCCATAA+AGG | + | chr2_2:1593202-1593221 | Msa0229760:intron | 30.0% | |
| TTGCTCATATTAGATTGATG+TGG | - | chr2_2:1593517-1593536 | None:intergenic | 30.0% | |
| ATTATTCAAGCAAGGTTTAC+CGG | - | chr2_2:1593583-1593602 | None:intergenic | 30.0% | |
| !!! | GCCCAATTTTTTAAAATTCG+GGG | + | chr2_2:1593712-1593731 | Msa0229760:intron | 30.0% |
| !! | GCCCCGAATTTTAAAAAATT+GGG | - | chr2_2:1593716-1593735 | None:intergenic | 30.0% |
| !! | TGCCCCGAATTTTAAAAAAT+TGG | - | chr2_2:1593717-1593736 | None:intergenic | 30.0% |
| GAAACAACAAATCATGAAGT+TGG | - | chr2_2:1593889-1593908 | None:intergenic | 30.0% | |
| GAAAACAATTCTTGAGCAAT+AGG | - | chr2_2:1594072-1594091 | None:intergenic | 30.0% | |
| GCATTATTGCTAATGTATGT+AGG | + | chr2_2:1594206-1594225 | Msa0229760:intron | 30.0% | |
| ! | TTGTCATTTGAATGAGAAGT+AGG | + | chr2_2:1594470-1594489 | Msa0229760:three_prime_UTR | 30.0% |
| AAAGAGAAGAAGAAGACGAA+AGG | + | chr2_2:1590637-1590656 | Msa0229760:five_prime_UTR | 35.0% | |
| ! | GTTGCATTTTCACAAACACT+TGG | - | chr2_2:1590949-1590968 | None:intergenic | 35.0% |
| ! | TGTGAAAATGCAACTTGTTC+TGG | + | chr2_2:1590955-1590974 | Msa0229760:intron | 35.0% |
| ! | GTGAAAATGCAACTTGTTCT+GGG | + | chr2_2:1590956-1590975 | Msa0229760:intron | 35.0% |
| ! | GTTTTTGTGTTTTCAGAGAG+CGG | + | chr2_2:1591026-1591045 | Msa0229760:intron | 35.0% |
| ACGCCATTCAATATAGACAT+AGG | - | chr2_2:1591464-1591483 | None:intergenic | 35.0% | |
| ACTTAAGTGGTTTATGCATG+TGG | + | chr2_2:1591560-1591579 | Msa0229760:intron | 35.0% | |
| AGATCTAGAGATCAATGAGA+TGG | + | chr2_2:1591689-1591708 | Msa0229760:intron | 35.0% | |
| CAATGAGATGGAGAAAGATA+TGG | + | chr2_2:1591701-1591720 | Msa0229760:intron | 35.0% | |
| TCATGTAGGGGAATAAGATT+TGG | + | chr2_2:1591755-1591774 | Msa0229760:intron | 35.0% | |
| ! | GATGTTGATGTTGTCTCTTT+TGG | + | chr2_2:1591780-1591799 | Msa0229760:intron | 35.0% |
| ! | TGATGTTGTCTCTTTTGGTA+AGG | + | chr2_2:1591785-1591804 | Msa0229760:intron | 35.0% |
| GCCATGAATTATTTATTGGC+GGG | + | chr2_2:1592052-1592071 | Msa0229760:intron | 35.0% | |
| TCCCGCCAATAAATAATTCA+TGG | - | chr2_2:1592056-1592075 | None:intergenic | 35.0% | |
| TCATAAAATGTCCAAAGCTC+GGG | - | chr2_2:1592146-1592165 | None:intergenic | 35.0% | |
| !! | ATGAACTTTTGTTTAGCGTC+TGG | + | chr2_2:1592162-1592181 | Msa0229760:intron | 35.0% |
| ! | TCACGATTAGGAGTATAAGT+TGG | - | chr2_2:1592326-1592345 | None:intergenic | 35.0% |
| ! | TTTCTTGTGCCACAATCTTT+TGG | + | chr2_2:1592595-1592614 | Msa0229760:intron | 35.0% |
| AATAACATCTGTAGGGTCTT+TGG | - | chr2_2:1592705-1592724 | None:intergenic | 35.0% | |
| CTTTGCGAATAACATCTGTA+GGG | - | chr2_2:1592712-1592731 | None:intergenic | 35.0% | |
| CGATCTCATTTCATACTGTT+CGG | - | chr2_2:1592920-1592939 | None:intergenic | 35.0% | |
| CAGTATGAAATGAGATCGTA+AGG | + | chr2_2:1592922-1592941 | Msa0229760:intron | 35.0% | |
| GTGGAGAACAAAATTGAACT+TGG | + | chr2_2:1593023-1593042 | Msa0229760:intron | 35.0% | |
| GGAGAACAAAATTGAACTTG+GGG | + | chr2_2:1593025-1593044 | Msa0229760:intron | 35.0% | |
| AACAAAATTGAACTTGGGGT+AGG | + | chr2_2:1593029-1593048 | Msa0229760:intron | 35.0% | |
| ! | GTTGTTATAATGCTACTTGC+AGG | - | chr2_2:1593080-1593099 | None:intergenic | 35.0% |
| AATTGTAATTTGGCCCCAAA+TGG | - | chr2_2:1593235-1593254 | None:intergenic | 35.0% | |
| AACTATTCATCCTATGTTGC+TGG | + | chr2_2:1593365-1593384 | Msa0229760:intron | 35.0% | |
| !! | TCTCTTGACTCGTTTTTCTA+TGG | + | chr2_2:1593394-1593413 | Msa0229760:intron | 35.0% |
| AAGTTCAACAGAGTCATTAG+AGG | - | chr2_2:1593436-1593455 | None:intergenic | 35.0% | |
| GCCCAATTTACAGTTTAGAA+TGG | - | chr2_2:1593470-1593489 | None:intergenic | 35.0% | |
| TTGATGTGGAATGATGAAAG+TGG | - | chr2_2:1593503-1593522 | None:intergenic | 35.0% | |
| ! | AGGCCAAGTGAAAGTTTTTA+GGG | + | chr2_2:1593680-1593699 | Msa0229760:intron | 35.0% |
| TCTCCCTAAAAACTTTCACT+TGG | - | chr2_2:1593686-1593705 | None:intergenic | 35.0% | |
| ! | TATGAAAGAAAGAAGGGCAT+TGG | + | chr2_2:1593968-1593987 | Msa0229760:intron | 35.0% |
| !! | ATGAAAGAAAGAAGGGCATT+GGG | + | chr2_2:1593969-1593988 | Msa0229760:intron | 35.0% |
| ATTGCTAATGTATGTAGGAC+AGG | + | chr2_2:1594211-1594230 | Msa0229760:intron | 35.0% | |
| TTGCTAATGTATGTAGGACA+GGG | + | chr2_2:1594212-1594231 | Msa0229760:intron | 35.0% | |
| AATGATTCGAGCACAGAAAA+AGG | + | chr2_2:1594350-1594369 | Msa0229760:CDS | 35.0% | |
| TAGCAAAAAGAGTGAAGCAT+AGG | + | chr2_2:1594428-1594447 | Msa0229760:CDS | 35.0% | |
| !! | CTACCATTTTGGCATTCTAA+AGG | + | chr2_2:1594664-1594683 | Msa0229760:three_prime_UTR | 35.0% |
| !! | GTACCTTTAGAATGCCAAAA+TGG | - | chr2_2:1594670-1594689 | None:intergenic | 35.0% |
| !! | GGCATTCTAAAGGTACATTT+TGG | + | chr2_2:1594674-1594693 | Msa0229760:three_prime_UTR | 35.0% |
| AAAGAGAAGAAGAAGACGAA+AGG | + | chr2_2:1590637-1590656 | Msa0229760:five_prime_UTR | 35.0% | |
| ! | GTTGCATTTTCACAAACACT+TGG | - | chr2_2:1590949-1590968 | None:intergenic | 35.0% |
| ! | TGTGAAAATGCAACTTGTTC+TGG | + | chr2_2:1590955-1590974 | Msa0229760:intron | 35.0% |
| ! | GTGAAAATGCAACTTGTTCT+GGG | + | chr2_2:1590956-1590975 | Msa0229760:intron | 35.0% |
| ! | GTTTTTGTGTTTTCAGAGAG+CGG | + | chr2_2:1591026-1591045 | Msa0229760:intron | 35.0% |
| ACGCCATTCAATATAGACAT+AGG | - | chr2_2:1591464-1591483 | None:intergenic | 35.0% | |
| ACTTAAGTGGTTTATGCATG+TGG | + | chr2_2:1591560-1591579 | Msa0229760:intron | 35.0% | |
| AGATCTAGAGATCAATGAGA+TGG | + | chr2_2:1591689-1591708 | Msa0229760:intron | 35.0% | |
| CAATGAGATGGAGAAAGATA+TGG | + | chr2_2:1591701-1591720 | Msa0229760:intron | 35.0% | |
| TCATGTAGGGGAATAAGATT+TGG | + | chr2_2:1591755-1591774 | Msa0229760:intron | 35.0% | |
| ! | GATGTTGATGTTGTCTCTTT+TGG | + | chr2_2:1591780-1591799 | Msa0229760:intron | 35.0% |
| ! | TGATGTTGTCTCTTTTGGTA+AGG | + | chr2_2:1591785-1591804 | Msa0229760:intron | 35.0% |
| GCCATGAATTATTTATTGGC+GGG | + | chr2_2:1592052-1592071 | Msa0229760:intron | 35.0% | |
| TCCCGCCAATAAATAATTCA+TGG | - | chr2_2:1592056-1592075 | None:intergenic | 35.0% | |
| TCATAAAATGTCCAAAGCTC+GGG | - | chr2_2:1592146-1592165 | None:intergenic | 35.0% | |
| !! | ATGAACTTTTGTTTAGCGTC+TGG | + | chr2_2:1592162-1592181 | Msa0229760:intron | 35.0% |
| ! | TCACGATTAGGAGTATAAGT+TGG | - | chr2_2:1592326-1592345 | None:intergenic | 35.0% |
| ! | TTTCTTGTGCCACAATCTTT+TGG | + | chr2_2:1592595-1592614 | Msa0229760:intron | 35.0% |
| AATAACATCTGTAGGGTCTT+TGG | - | chr2_2:1592705-1592724 | None:intergenic | 35.0% | |
| CTTTGCGAATAACATCTGTA+GGG | - | chr2_2:1592712-1592731 | None:intergenic | 35.0% | |
| CGATCTCATTTCATACTGTT+CGG | - | chr2_2:1592920-1592939 | None:intergenic | 35.0% | |
| CAGTATGAAATGAGATCGTA+AGG | + | chr2_2:1592922-1592941 | Msa0229760:intron | 35.0% | |
| GTGGAGAACAAAATTGAACT+TGG | + | chr2_2:1593023-1593042 | Msa0229760:intron | 35.0% | |
| GGAGAACAAAATTGAACTTG+GGG | + | chr2_2:1593025-1593044 | Msa0229760:intron | 35.0% | |
| AACAAAATTGAACTTGGGGT+AGG | + | chr2_2:1593029-1593048 | Msa0229760:intron | 35.0% | |
| ! | GTTGTTATAATGCTACTTGC+AGG | - | chr2_2:1593080-1593099 | None:intergenic | 35.0% |
| AATTGTAATTTGGCCCCAAA+TGG | - | chr2_2:1593235-1593254 | None:intergenic | 35.0% | |
| AACTATTCATCCTATGTTGC+TGG | + | chr2_2:1593365-1593384 | Msa0229760:intron | 35.0% | |
| !! | TCTCTTGACTCGTTTTTCTA+TGG | + | chr2_2:1593394-1593413 | Msa0229760:intron | 35.0% |
| AAGTTCAACAGAGTCATTAG+AGG | - | chr2_2:1593436-1593455 | None:intergenic | 35.0% | |
| GCCCAATTTACAGTTTAGAA+TGG | - | chr2_2:1593470-1593489 | None:intergenic | 35.0% | |
| TTGATGTGGAATGATGAAAG+TGG | - | chr2_2:1593503-1593522 | None:intergenic | 35.0% | |
| ! | AGGCCAAGTGAAAGTTTTTA+GGG | + | chr2_2:1593680-1593699 | Msa0229760:intron | 35.0% |
| TCTCCCTAAAAACTTTCACT+TGG | - | chr2_2:1593686-1593705 | None:intergenic | 35.0% | |
| ! | TATGAAAGAAAGAAGGGCAT+TGG | + | chr2_2:1593968-1593987 | Msa0229760:intron | 35.0% |
| !! | ATGAAAGAAAGAAGGGCATT+GGG | + | chr2_2:1593969-1593988 | Msa0229760:intron | 35.0% |
| ATTGCTAATGTATGTAGGAC+AGG | + | chr2_2:1594211-1594230 | Msa0229760:intron | 35.0% | |
| TTGCTAATGTATGTAGGACA+GGG | + | chr2_2:1594212-1594231 | Msa0229760:intron | 35.0% | |
| AATGATTCGAGCACAGAAAA+AGG | + | chr2_2:1594350-1594369 | Msa0229760:CDS | 35.0% | |
| TAGCAAAAAGAGTGAAGCAT+AGG | + | chr2_2:1594428-1594447 | Msa0229760:CDS | 35.0% | |
| !! | CTACCATTTTGGCATTCTAA+AGG | + | chr2_2:1594664-1594683 | Msa0229760:three_prime_UTR | 35.0% |
| !! | GTACCTTTAGAATGCCAAAA+TGG | - | chr2_2:1594670-1594689 | None:intergenic | 35.0% |
| !! | GGCATTCTAAAGGTACATTT+TGG | + | chr2_2:1594674-1594693 | Msa0229760:three_prime_UTR | 35.0% |
| AGAAGAAGACGAAAGGATCT+TGG | + | chr2_2:1590644-1590663 | Msa0229760:five_prime_UTR | 40.0% | |
| AATCCTTACCTTGAGGTTGA+AGG | - | chr2_2:1590875-1590894 | None:intergenic | 40.0% | |
| GTTCCCATTTCCCAAACATT+TGG | + | chr2_2:1591280-1591299 | Msa0229760:intron | 40.0% | |
| CAGCCAAATGTTTGGGAAAT+GGG | - | chr2_2:1591286-1591305 | None:intergenic | 40.0% | |
| TCAGCCAAATGTTTGGGAAA+TGG | - | chr2_2:1591287-1591306 | None:intergenic | 40.0% | |
| TTCCCAAACATTTGGCTGAT+TGG | + | chr2_2:1591288-1591307 | Msa0229760:intron | 40.0% | |
| AGCCAATCAGCCAAATGTTT+GGG | - | chr2_2:1591293-1591312 | None:intergenic | 40.0% | |
| AAGCCAATCAGCCAAATGTT+TGG | - | chr2_2:1591294-1591313 | None:intergenic | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr2_2:1591605-1591624 | Msa0229760:intron | 40.0% | |
| TGACGTCGTTTGATTCATGT+AGG | + | chr2_2:1591741-1591760 | Msa0229760:intron | 40.0% | |
| GACGTCGTTTGATTCATGTA+GGG | + | chr2_2:1591742-1591761 | Msa0229760:intron | 40.0% | |
| ACGTCGTTTGATTCATGTAG+GGG | + | chr2_2:1591743-1591762 | Msa0229760:intron | 40.0% | |
| GATTCATATGTTCCTCATGC+AGG | + | chr2_2:1592247-1592266 | Msa0229760:intron | 40.0% | |
| AGCTACTGTAGTTATGGGAA+AGG | + | chr2_2:1592295-1592314 | Msa0229760:CDS | 40.0% | |
| TATACTCCTAATCGTGACGA+TGG | + | chr2_2:1592329-1592348 | Msa0229760:CDS | 40.0% | |
| ATATCTCCATCGTCACGATT+AGG | - | chr2_2:1592338-1592357 | None:intergenic | 40.0% | |
| GACATAAAGTAGTGGCATGT+AGG | + | chr2_2:1592636-1592655 | Msa0229760:intron | 40.0% | |
| TCAGAGTTCTTTGCTTAAGG+TGG | - | chr2_2:1592670-1592689 | None:intergenic | 40.0% | |
| CCTTCAGAGTTCTTTGCTTA+AGG | - | chr2_2:1592673-1592692 | None:intergenic | 40.0% | |
| CCTTAAGCAAAGAACTCTGA+AGG | + | chr2_2:1592670-1592689 | Msa0229760:intron | 40.0% | |
| ! | AAGAACTCTGAAGGATCAGA+TGG | + | chr2_2:1592679-1592698 | Msa0229760:CDS | 40.0% |
| GCTTTGCGAATAACATCTGT+AGG | - | chr2_2:1592713-1592732 | None:intergenic | 40.0% | |
| AGTCTAAGGAAAGTGACTTG+AGG | + | chr2_2:1592991-1593010 | Msa0229760:intron | 40.0% | |
| GTCTAAGGAAAGTGACTTGA+GGG | + | chr2_2:1592992-1593011 | Msa0229760:intron | 40.0% | |
| !! | TGACTTGAGGGTATCTTTAG+TGG | + | chr2_2:1593004-1593023 | Msa0229760:intron | 40.0% |
| AAATGGTCATGGGCCTTTAT+GGG | - | chr2_2:1593218-1593237 | None:intergenic | 40.0% | |
| ATAAAGGCCCATGACCATTT+GGG | + | chr2_2:1593218-1593237 | Msa0229760:intron | 40.0% | |
| TGTCTCGTAAACGAAATAGC+TGG | - | chr2_2:1593342-1593361 | None:intergenic | 40.0% | |
| GAGATTTACTCCAGCAACAT+AGG | - | chr2_2:1593378-1593397 | None:intergenic | 40.0% | |
| ! | AGTTTAGAATGGATGACAGC+AGG | - | chr2_2:1593459-1593478 | None:intergenic | 40.0% |
| TTCACCACCAAAACTTTCAC+CGG | + | chr2_2:1593561-1593580 | Msa0229760:intron | 40.0% | |
| !! | TTTACCGGTGAAAGTTTTGG+TGG | - | chr2_2:1593568-1593587 | None:intergenic | 40.0% |
| ! | AGGTTTACCGGTGAAAGTTT+TGG | - | chr2_2:1593571-1593590 | None:intergenic | 40.0% |
| ! | GAGGCCAAGTGAAAGTTTTT+AGG | + | chr2_2:1593679-1593698 | Msa0229760:intron | 40.0% |
| CCATTCTACGTCATCACAAA+AGG | - | chr2_2:1593749-1593768 | None:intergenic | 40.0% | |
| !! | CCTTTTGTGATGACGTAGAA+TGG | + | chr2_2:1593746-1593765 | Msa0229760:intron | 40.0% |
| TCCTGTAGCTGGACATTAAT+TGG | - | chr2_2:1593789-1593808 | None:intergenic | 40.0% | |
| TTAATGTCCAGCTACAGGAA+TGG | + | chr2_2:1593790-1593809 | Msa0229760:intron | 40.0% | |
| CAACAAATCATGAAGTTGGC+TGG | - | chr2_2:1593885-1593904 | None:intergenic | 40.0% | |
| !! | TGAAAGAAAGAAGGGCATTG+GGG | + | chr2_2:1593970-1593989 | Msa0229760:intron | 40.0% |
| GCACATGTATGAAAATGACC+TGG | - | chr2_2:1594030-1594049 | None:intergenic | 40.0% | |
| TCATACATGTGCAGAGATGA+AGG | + | chr2_2:1594038-1594057 | Msa0229760:intron | 40.0% | |
| CAGGGAAGATCCTTAATTTC+CGG | - | chr2_2:1594239-1594258 | None:intergenic | 40.0% | |
| ! | TTCGAACCAGACTACCATTT+TGG | + | chr2_2:1594653-1594672 | Msa0229760:three_prime_UTR | 40.0% |
| AGAATGCCAAAATGGTAGTC+TGG | - | chr2_2:1594662-1594681 | None:intergenic | 40.0% | |
| AGAAGAAGACGAAAGGATCT+TGG | + | chr2_2:1590644-1590663 | Msa0229760:five_prime_UTR | 40.0% | |
| AATCCTTACCTTGAGGTTGA+AGG | - | chr2_2:1590875-1590894 | None:intergenic | 40.0% | |
| GTTCCCATTTCCCAAACATT+TGG | + | chr2_2:1591280-1591299 | Msa0229760:intron | 40.0% | |
| CAGCCAAATGTTTGGGAAAT+GGG | - | chr2_2:1591286-1591305 | None:intergenic | 40.0% | |
| TCAGCCAAATGTTTGGGAAA+TGG | - | chr2_2:1591287-1591306 | None:intergenic | 40.0% | |
| TTCCCAAACATTTGGCTGAT+TGG | + | chr2_2:1591288-1591307 | Msa0229760:intron | 40.0% | |
| AGCCAATCAGCCAAATGTTT+GGG | - | chr2_2:1591293-1591312 | None:intergenic | 40.0% | |
| AAGCCAATCAGCCAAATGTT+TGG | - | chr2_2:1591294-1591313 | None:intergenic | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr2_2:1591605-1591624 | Msa0229760:intron | 40.0% | |
| TGACGTCGTTTGATTCATGT+AGG | + | chr2_2:1591741-1591760 | Msa0229760:intron | 40.0% | |
| GACGTCGTTTGATTCATGTA+GGG | + | chr2_2:1591742-1591761 | Msa0229760:intron | 40.0% | |
| ACGTCGTTTGATTCATGTAG+GGG | + | chr2_2:1591743-1591762 | Msa0229760:intron | 40.0% | |
| GATTCATATGTTCCTCATGC+AGG | + | chr2_2:1592247-1592266 | Msa0229760:intron | 40.0% | |
| AGCTACTGTAGTTATGGGAA+AGG | + | chr2_2:1592295-1592314 | Msa0229760:CDS | 40.0% | |
| TATACTCCTAATCGTGACGA+TGG | + | chr2_2:1592329-1592348 | Msa0229760:CDS | 40.0% | |
| ATATCTCCATCGTCACGATT+AGG | - | chr2_2:1592338-1592357 | None:intergenic | 40.0% | |
| GACATAAAGTAGTGGCATGT+AGG | + | chr2_2:1592636-1592655 | Msa0229760:intron | 40.0% | |
| TCAGAGTTCTTTGCTTAAGG+TGG | - | chr2_2:1592670-1592689 | None:intergenic | 40.0% | |
| CCTTCAGAGTTCTTTGCTTA+AGG | - | chr2_2:1592673-1592692 | None:intergenic | 40.0% | |
| CCTTAAGCAAAGAACTCTGA+AGG | + | chr2_2:1592670-1592689 | Msa0229760:intron | 40.0% | |
| ! | AAGAACTCTGAAGGATCAGA+TGG | + | chr2_2:1592679-1592698 | Msa0229760:CDS | 40.0% |
| GCTTTGCGAATAACATCTGT+AGG | - | chr2_2:1592713-1592732 | None:intergenic | 40.0% | |
| AGTCTAAGGAAAGTGACTTG+AGG | + | chr2_2:1592991-1593010 | Msa0229760:intron | 40.0% | |
| GTCTAAGGAAAGTGACTTGA+GGG | + | chr2_2:1592992-1593011 | Msa0229760:intron | 40.0% | |
| !! | TGACTTGAGGGTATCTTTAG+TGG | + | chr2_2:1593004-1593023 | Msa0229760:intron | 40.0% |
| AAATGGTCATGGGCCTTTAT+GGG | - | chr2_2:1593218-1593237 | None:intergenic | 40.0% | |
| ATAAAGGCCCATGACCATTT+GGG | + | chr2_2:1593218-1593237 | Msa0229760:intron | 40.0% | |
| TGTCTCGTAAACGAAATAGC+TGG | - | chr2_2:1593342-1593361 | None:intergenic | 40.0% | |
| GAGATTTACTCCAGCAACAT+AGG | - | chr2_2:1593378-1593397 | None:intergenic | 40.0% | |
| ! | AGTTTAGAATGGATGACAGC+AGG | - | chr2_2:1593459-1593478 | None:intergenic | 40.0% |
| TTCACCACCAAAACTTTCAC+CGG | + | chr2_2:1593561-1593580 | Msa0229760:intron | 40.0% | |
| !! | TTTACCGGTGAAAGTTTTGG+TGG | - | chr2_2:1593568-1593587 | None:intergenic | 40.0% |
| ! | AGGTTTACCGGTGAAAGTTT+TGG | - | chr2_2:1593571-1593590 | None:intergenic | 40.0% |
| ! | GAGGCCAAGTGAAAGTTTTT+AGG | + | chr2_2:1593679-1593698 | Msa0229760:intron | 40.0% |
| CCATTCTACGTCATCACAAA+AGG | - | chr2_2:1593749-1593768 | None:intergenic | 40.0% | |
| !! | CCTTTTGTGATGACGTAGAA+TGG | + | chr2_2:1593746-1593765 | Msa0229760:intron | 40.0% |
| TCCTGTAGCTGGACATTAAT+TGG | - | chr2_2:1593789-1593808 | None:intergenic | 40.0% | |
| TTAATGTCCAGCTACAGGAA+TGG | + | chr2_2:1593790-1593809 | Msa0229760:intron | 40.0% | |
| CAACAAATCATGAAGTTGGC+TGG | - | chr2_2:1593885-1593904 | None:intergenic | 40.0% | |
| !! | TGAAAGAAAGAAGGGCATTG+GGG | + | chr2_2:1593970-1593989 | Msa0229760:intron | 40.0% |
| GCACATGTATGAAAATGACC+TGG | - | chr2_2:1594030-1594049 | None:intergenic | 40.0% | |
| TCATACATGTGCAGAGATGA+AGG | + | chr2_2:1594038-1594057 | Msa0229760:intron | 40.0% | |
| CAGGGAAGATCCTTAATTTC+CGG | - | chr2_2:1594239-1594258 | None:intergenic | 40.0% | |
| ! | TTCGAACCAGACTACCATTT+TGG | + | chr2_2:1594653-1594672 | Msa0229760:three_prime_UTR | 40.0% |
| AGAATGCCAAAATGGTAGTC+TGG | - | chr2_2:1594662-1594681 | None:intergenic | 40.0% | |
| GGTAAACTCCTTCAACCTCA+AGG | + | chr2_2:1590864-1590883 | Msa0229760:CDS | 45.0% | |
| ACTCCTTCAACCTCAAGGTA+AGG | + | chr2_2:1590869-1590888 | Msa0229760:intron | 45.0% | |
| !! | GCATTAATCTTGATGGGCTC+CGG | + | chr2_2:1591064-1591083 | Msa0229760:CDS | 45.0% |
| TCCCAAATCCGACACAGATA+CGG | + | chr2_2:1591380-1591399 | Msa0229760:intron | 45.0% | |
| ACCGTATCTGTGTCGGATTT+GGG | - | chr2_2:1591384-1591403 | None:intergenic | 45.0% | |
| TTGGTAGACCGTATCTGTGT+CGG | - | chr2_2:1591391-1591410 | None:intergenic | 45.0% | |
| GCATGTGGATAGAAGTCATG+TGG | + | chr2_2:1591575-1591594 | Msa0229760:intron | 45.0% | |
| GGATAGAAGTCATGTGGATG+TGG | + | chr2_2:1591581-1591600 | Msa0229760:intron | 45.0% | |
| GTCATGTGGATGTGGTAGTA+AGG | + | chr2_2:1591589-1591608 | Msa0229760:intron | 45.0% | |
| AGGAGAGTAGATCAGATGGA+AGG | + | chr2_2:1591609-1591628 | Msa0229760:intron | 45.0% | |
| GGAGAGTAGATCAGATGGAA+GGG | + | chr2_2:1591610-1591629 | Msa0229760:intron | 45.0% | |
| GAGGCAAATCACTAGAGGTA+GGG | + | chr2_2:1591632-1591651 | Msa0229760:intron | 45.0% | |
| AGGCAAATCACTAGAGGTAG+GGG | + | chr2_2:1591633-1591652 | Msa0229760:intron | 45.0% | |
| TGTAGAAGATTCCCGAGCTT+TGG | + | chr2_2:1592132-1592151 | Msa0229760:intron | 45.0% | |
| TTTGTTTAGCGTCTGGACTC+TGG | + | chr2_2:1592169-1592188 | Msa0229760:intron | 45.0% | |
| ATGTTCCTCATGCAGGTTCT+CGG | + | chr2_2:1592254-1592273 | Msa0229760:intron | 45.0% | |
| GTGCATTGTGCTTAATGCCA+AGG | + | chr2_2:1592358-1592377 | Msa0229760:CDS | 45.0% | |
| CCAAGGATATTGCTGTGACT+GGG | + | chr2_2:1592375-1592394 | Msa0229760:CDS | 45.0% | |
| TGACAGACAAGGTCTACTAC+TGG | + | chr2_2:1592405-1592424 | Msa0229760:intron | 45.0% | |
| AAGGTCTACTACTGGCATAC+AGG | + | chr2_2:1592413-1592432 | Msa0229760:intron | 45.0% | |
| AGGTCTACTACTGGCATACA+GGG | + | chr2_2:1592414-1592433 | Msa0229760:intron | 45.0% | |
| AGTAGTGGCATGTAGGTATG+TGG | + | chr2_2:1592643-1592662 | Msa0229760:intron | 45.0% | |
| GTAGTGGCATGTAGGTATGT+GGG | + | chr2_2:1592644-1592663 | Msa0229760:intron | 45.0% | |
| CTTATGGTAGGAAGCAGTTC+TGG | - | chr2_2:1592966-1592985 | None:intergenic | 45.0% | |
| CAAATGGTCATGGGCCTTTA+TGG | - | chr2_2:1593219-1593238 | None:intergenic | 45.0% | |
| CATAAAGGCCCATGACCATT+TGG | + | chr2_2:1593217-1593236 | Msa0229760:intron | 45.0% | |
| TAAAGGCCCATGACCATTTG+GGG | + | chr2_2:1593219-1593238 | Msa0229760:intron | 45.0% | |
| ATTTGGCCCCAAATGGTCAT+GGG | - | chr2_2:1593228-1593247 | None:intergenic | 45.0% | |
| AATTTGGCCCCAAATGGTCA+TGG | - | chr2_2:1593229-1593248 | None:intergenic | 45.0% | |
| CGTCATCACAAAAGGCTTGT+GGG | - | chr2_2:1593741-1593760 | None:intergenic | 45.0% | |
| ACGTCATCACAAAAGGCTTG+TGG | - | chr2_2:1593742-1593761 | None:intergenic | 45.0% | |
| GTAGCTGGACATTAATTGGC+AGG | - | chr2_2:1593785-1593804 | None:intergenic | 45.0% | |
| GCCAATTAATGTCCAGCTAC+AGG | + | chr2_2:1593785-1593804 | Msa0229760:intron | 45.0% | |
| ACATGTTCAGCTCATGTTGG+AGG | - | chr2_2:1593824-1593843 | None:intergenic | 45.0% | |
| GTGACATGTTCAGCTCATGT+TGG | - | chr2_2:1593827-1593846 | None:intergenic | 45.0% | |
| AATGTATGTAGGACAGGGAC+CGG | + | chr2_2:1594217-1594236 | Msa0229760:intron | 45.0% | |
| CGGAAATTAAGGATCTTCCC+TGG | + | chr2_2:1594237-1594256 | Msa0229760:CDS | 45.0% | |
| ! | GGCATCACATAAGGTTCTAG+TGG | - | chr2_2:1594288-1594307 | None:intergenic | 45.0% |
| AACCTTATGTGATGCCTCCT+AGG | + | chr2_2:1594292-1594311 | Msa0229760:CDS | 45.0% | |
| GGTAAACTCCTTCAACCTCA+AGG | + | chr2_2:1590864-1590883 | Msa0229760:CDS | 45.0% | |
| ACTCCTTCAACCTCAAGGTA+AGG | + | chr2_2:1590869-1590888 | Msa0229760:intron | 45.0% | |
| !! | GCATTAATCTTGATGGGCTC+CGG | + | chr2_2:1591064-1591083 | Msa0229760:CDS | 45.0% |
| TCCCAAATCCGACACAGATA+CGG | + | chr2_2:1591380-1591399 | Msa0229760:intron | 45.0% | |
| ACCGTATCTGTGTCGGATTT+GGG | - | chr2_2:1591384-1591403 | None:intergenic | 45.0% | |
| TTGGTAGACCGTATCTGTGT+CGG | - | chr2_2:1591391-1591410 | None:intergenic | 45.0% | |
| GCATGTGGATAGAAGTCATG+TGG | + | chr2_2:1591575-1591594 | Msa0229760:intron | 45.0% | |
| GGATAGAAGTCATGTGGATG+TGG | + | chr2_2:1591581-1591600 | Msa0229760:intron | 45.0% | |
| GTCATGTGGATGTGGTAGTA+AGG | + | chr2_2:1591589-1591608 | Msa0229760:intron | 45.0% | |
| AGGAGAGTAGATCAGATGGA+AGG | + | chr2_2:1591609-1591628 | Msa0229760:intron | 45.0% | |
| GGAGAGTAGATCAGATGGAA+GGG | + | chr2_2:1591610-1591629 | Msa0229760:intron | 45.0% | |
| GAGGCAAATCACTAGAGGTA+GGG | + | chr2_2:1591632-1591651 | Msa0229760:intron | 45.0% | |
| AGGCAAATCACTAGAGGTAG+GGG | + | chr2_2:1591633-1591652 | Msa0229760:intron | 45.0% | |
| TGTAGAAGATTCCCGAGCTT+TGG | + | chr2_2:1592132-1592151 | Msa0229760:intron | 45.0% | |
| TTTGTTTAGCGTCTGGACTC+TGG | + | chr2_2:1592169-1592188 | Msa0229760:intron | 45.0% | |
| ATGTTCCTCATGCAGGTTCT+CGG | + | chr2_2:1592254-1592273 | Msa0229760:intron | 45.0% | |
| GTGCATTGTGCTTAATGCCA+AGG | + | chr2_2:1592358-1592377 | Msa0229760:CDS | 45.0% | |
| CCAAGGATATTGCTGTGACT+GGG | + | chr2_2:1592375-1592394 | Msa0229760:CDS | 45.0% | |
| TGACAGACAAGGTCTACTAC+TGG | + | chr2_2:1592405-1592424 | Msa0229760:intron | 45.0% | |
| AAGGTCTACTACTGGCATAC+AGG | + | chr2_2:1592413-1592432 | Msa0229760:intron | 45.0% | |
| AGGTCTACTACTGGCATACA+GGG | + | chr2_2:1592414-1592433 | Msa0229760:intron | 45.0% | |
| AGTAGTGGCATGTAGGTATG+TGG | + | chr2_2:1592643-1592662 | Msa0229760:intron | 45.0% | |
| GTAGTGGCATGTAGGTATGT+GGG | + | chr2_2:1592644-1592663 | Msa0229760:intron | 45.0% | |
| CTTATGGTAGGAAGCAGTTC+TGG | - | chr2_2:1592966-1592985 | None:intergenic | 45.0% | |
| CAAATGGTCATGGGCCTTTA+TGG | - | chr2_2:1593219-1593238 | None:intergenic | 45.0% | |
| CATAAAGGCCCATGACCATT+TGG | + | chr2_2:1593217-1593236 | Msa0229760:intron | 45.0% | |
| TAAAGGCCCATGACCATTTG+GGG | + | chr2_2:1593219-1593238 | Msa0229760:intron | 45.0% | |
| ATTTGGCCCCAAATGGTCAT+GGG | - | chr2_2:1593228-1593247 | None:intergenic | 45.0% | |
| AATTTGGCCCCAAATGGTCA+TGG | - | chr2_2:1593229-1593248 | None:intergenic | 45.0% | |
| CGTCATCACAAAAGGCTTGT+GGG | - | chr2_2:1593741-1593760 | None:intergenic | 45.0% | |
| ACGTCATCACAAAAGGCTTG+TGG | - | chr2_2:1593742-1593761 | None:intergenic | 45.0% | |
| GTAGCTGGACATTAATTGGC+AGG | - | chr2_2:1593785-1593804 | None:intergenic | 45.0% | |
| GCCAATTAATGTCCAGCTAC+AGG | + | chr2_2:1593785-1593804 | Msa0229760:intron | 45.0% | |
| ACATGTTCAGCTCATGTTGG+AGG | - | chr2_2:1593824-1593843 | None:intergenic | 45.0% | |
| GTGACATGTTCAGCTCATGT+TGG | - | chr2_2:1593827-1593846 | None:intergenic | 45.0% | |
| AATGTATGTAGGACAGGGAC+CGG | + | chr2_2:1594217-1594236 | Msa0229760:intron | 45.0% | |
| CGGAAATTAAGGATCTTCCC+TGG | + | chr2_2:1594237-1594256 | Msa0229760:CDS | 45.0% | |
| ! | GGCATCACATAAGGTTCTAG+TGG | - | chr2_2:1594288-1594307 | None:intergenic | 45.0% |
| AACCTTATGTGATGCCTCCT+AGG | + | chr2_2:1594292-1594311 | Msa0229760:CDS | 45.0% | |
| !! | ATAAAATAAAATAAAATTGA+AGG | - | chr2_2:1590792-1590811 | None:intergenic | 5.0% |
| !!! | TTTATTTTATTTTTTTGAAT+AGG | + | chr2_2:1590802-1590821 | Msa0229760:intron | 5.0% |
| !!! | TTAAAAATTTGTATTTTTTA+GGG | - | chr2_2:1593155-1593174 | None:intergenic | 5.0% |
| !!! | TTTAAAAATTTGTATTTTTT+AGG | - | chr2_2:1593156-1593175 | None:intergenic | 5.0% |
| !! | ATAAAATAAAATAAAATTGA+AGG | - | chr2_2:1590792-1590811 | None:intergenic | 5.0% |
| !!! | TTTATTTTATTTTTTTGAAT+AGG | + | chr2_2:1590802-1590821 | Msa0229760:intron | 5.0% |
| !!! | TTAAAAATTTGTATTTTTTA+GGG | - | chr2_2:1593155-1593174 | None:intergenic | 5.0% |
| !!! | TTTAAAAATTTGTATTTTTT+AGG | - | chr2_2:1593156-1593175 | None:intergenic | 5.0% |
| !! | TTAATCTTGATGGGCTCCGG+TGG | + | chr2_2:1591067-1591086 | Msa0229760:CDS | 50.0% |
| CATGGTCACATTCAGTCACC+TGG | - | chr2_2:1591113-1591132 | None:intergenic | 50.0% | |
| GACCGTATCTGTGTCGGATT+TGG | - | chr2_2:1591385-1591404 | None:intergenic | 50.0% | |
| GAGTAGATCAGATGGAAGGG+AGG | + | chr2_2:1591613-1591632 | Msa0229760:intron | 50.0% | |
| GAAGGGAGGCAAATCACTAG+AGG | + | chr2_2:1591627-1591646 | Msa0229760:intron | 50.0% | |
| GGAGGCAAATCACTAGAGGT+AGG | + | chr2_2:1591631-1591650 | Msa0229760:intron | 50.0% | |
| TGTTCCTCATGCAGGTTCTC+GGG | + | chr2_2:1592255-1592274 | Msa0229760:intron | 50.0% | |
| GCCAAGGATATTGCTGTGAC+TGG | + | chr2_2:1592374-1592393 | Msa0229760:CDS | 50.0% | |
| CCCAGTCACAGCAATATCCT+TGG | - | chr2_2:1592378-1592397 | None:intergenic | 50.0% | |
| AGGATATTGCTGTGACTGGG+AGG | + | chr2_2:1592378-1592397 | Msa0229760:CDS | 50.0% | |
| GAACTTGGGGTAGGACCTAA+TGG | + | chr2_2:1593038-1593057 | Msa0229760:intron | 50.0% | |
| CAGCTACAGGAATGGAATCG+CGG | + | chr2_2:1593798-1593817 | Msa0229760:intron | 50.0% | |
| AGGACAGGGACCGGAAATTA+AGG | + | chr2_2:1594226-1594245 | Msa0229760:intron | 50.0% | |
| TCTAGTGGCCGATCACCAAA+GGG | - | chr2_2:1594273-1594292 | None:intergenic | 50.0% | |
| TTCTAGTGGCCGATCACCAA+AGG | - | chr2_2:1594274-1594293 | None:intergenic | 50.0% | |
| !! | GTCCTAGGAGGCATCACATA+AGG | - | chr2_2:1594297-1594316 | None:intergenic | 50.0% |
| ATCTCTCGTACTGTCCTAGG+AGG | - | chr2_2:1594309-1594328 | None:intergenic | 50.0% | |
| CTCATCTCTCGTACTGTCCT+AGG | - | chr2_2:1594312-1594331 | None:intergenic | 50.0% | |
| !! | TTAATCTTGATGGGCTCCGG+TGG | + | chr2_2:1591067-1591086 | Msa0229760:CDS | 50.0% |
| CATGGTCACATTCAGTCACC+TGG | - | chr2_2:1591113-1591132 | None:intergenic | 50.0% | |
| GACCGTATCTGTGTCGGATT+TGG | - | chr2_2:1591385-1591404 | None:intergenic | 50.0% | |
| GAGTAGATCAGATGGAAGGG+AGG | + | chr2_2:1591613-1591632 | Msa0229760:intron | 50.0% | |
| GAAGGGAGGCAAATCACTAG+AGG | + | chr2_2:1591627-1591646 | Msa0229760:intron | 50.0% | |
| GGAGGCAAATCACTAGAGGT+AGG | + | chr2_2:1591631-1591650 | Msa0229760:intron | 50.0% | |
| TGTTCCTCATGCAGGTTCTC+GGG | + | chr2_2:1592255-1592274 | Msa0229760:intron | 50.0% | |
| GCCAAGGATATTGCTGTGAC+TGG | + | chr2_2:1592374-1592393 | Msa0229760:CDS | 50.0% | |
| CCCAGTCACAGCAATATCCT+TGG | - | chr2_2:1592378-1592397 | None:intergenic | 50.0% | |
| AGGATATTGCTGTGACTGGG+AGG | + | chr2_2:1592378-1592397 | Msa0229760:CDS | 50.0% | |
| GAACTTGGGGTAGGACCTAA+TGG | + | chr2_2:1593038-1593057 | Msa0229760:intron | 50.0% | |
| CAGCTACAGGAATGGAATCG+CGG | + | chr2_2:1593798-1593817 | Msa0229760:intron | 50.0% | |
| AGGACAGGGACCGGAAATTA+AGG | + | chr2_2:1594226-1594245 | Msa0229760:intron | 50.0% | |
| TCTAGTGGCCGATCACCAAA+GGG | - | chr2_2:1594273-1594292 | None:intergenic | 50.0% | |
| TTCTAGTGGCCGATCACCAA+AGG | - | chr2_2:1594274-1594293 | None:intergenic | 50.0% | |
| !! | GTCCTAGGAGGCATCACATA+AGG | - | chr2_2:1594297-1594316 | None:intergenic | 50.0% |
| ATCTCTCGTACTGTCCTAGG+AGG | - | chr2_2:1594309-1594328 | None:intergenic | 50.0% | |
| CTCATCTCTCGTACTGTCCT+AGG | - | chr2_2:1594312-1594331 | None:intergenic | 50.0% | |
| ! | TGTTTTCAGAGAGCGGCAGC+TGG | + | chr2_2:1591033-1591052 | Msa0229760:intron | 55.0% |
| !!! | TGGCGGGTTTTCGATGCCAA+GGG | + | chr2_2:1591087-1591106 | Msa0229760:CDS | 55.0% |
| ACATTCAGTCACCTGGCCCT+TGG | - | chr2_2:1591106-1591125 | None:intergenic | 55.0% | |
| TGGGAGGAAGCTGACAGACA+AGG | + | chr2_2:1592394-1592413 | Msa0229760:CDS | 55.0% | |
| CGCGATTCCATTCCTGTAGC+TGG | - | chr2_2:1593800-1593819 | None:intergenic | 55.0% | |
| !! | CAAAGGGGTGCTCACTACCA+GGG | - | chr2_2:1594257-1594276 | None:intergenic | 55.0% |
| ! | GTGAGCACCCCTTTGGTGAT+CGG | + | chr2_2:1594262-1594281 | Msa0229760:CDS | 55.0% |
| CTAGTGGCCGATCACCAAAG+GGG | - | chr2_2:1594272-1594291 | None:intergenic | 55.0% | |
| GAGAGATGAGACCACGAGCA+AGG | + | chr2_2:1594322-1594341 | Msa0229760:CDS | 55.0% | |
| ATCATTGCACGCCTTGCTCG+TGG | - | chr2_2:1594336-1594355 | None:intergenic | 55.0% | |
| TGAGCAGCGACAGAATGCTG+AGG | + | chr2_2:1594395-1594414 | Msa0229760:CDS | 55.0% | |
| ! | TGTTTTCAGAGAGCGGCAGC+TGG | + | chr2_2:1591033-1591052 | Msa0229760:intron | 55.0% |
| !!! | TGGCGGGTTTTCGATGCCAA+GGG | + | chr2_2:1591087-1591106 | Msa0229760:CDS | 55.0% |
| ACATTCAGTCACCTGGCCCT+TGG | - | chr2_2:1591106-1591125 | None:intergenic | 55.0% | |
| TGGGAGGAAGCTGACAGACA+AGG | + | chr2_2:1592394-1592413 | Msa0229760:CDS | 55.0% | |
| CGCGATTCCATTCCTGTAGC+TGG | - | chr2_2:1593800-1593819 | None:intergenic | 55.0% | |
| !! | CAAAGGGGTGCTCACTACCA+GGG | - | chr2_2:1594257-1594276 | None:intergenic | 55.0% |
| ! | GTGAGCACCCCTTTGGTGAT+CGG | + | chr2_2:1594262-1594281 | Msa0229760:CDS | 55.0% |
| CTAGTGGCCGATCACCAAAG+GGG | - | chr2_2:1594272-1594291 | None:intergenic | 55.0% | |
| GAGAGATGAGACCACGAGCA+AGG | + | chr2_2:1594322-1594341 | Msa0229760:CDS | 55.0% | |
| ATCATTGCACGCCTTGCTCG+TGG | - | chr2_2:1594336-1594355 | None:intergenic | 55.0% | |
| TGAGCAGCGACAGAATGCTG+AGG | + | chr2_2:1594395-1594414 | Msa0229760:CDS | 55.0% | |
| !! | ATCTTGATGGGCTCCGGTGG+CGG | + | chr2_2:1591070-1591089 | Msa0229760:CDS | 60.0% |
| ! | TGGCATCGAAAACCCGCCAC+CGG | - | chr2_2:1591086-1591105 | None:intergenic | 60.0% |
| !!! | GTGGCGGGTTTTCGATGCCA+AGG | + | chr2_2:1591086-1591105 | Msa0229760:CDS | 60.0% |
| ! | GGTTTTCGATGCCAAGGGCC+AGG | + | chr2_2:1591092-1591111 | Msa0229760:CDS | 60.0% |
| TCCTCATGCAGGTTCTCGGG+AGG | + | chr2_2:1592258-1592277 | Msa0229760:intron | 60.0% | |
| ACCTCCCGAGAACCTGCATG+AGG | - | chr2_2:1592262-1592281 | None:intergenic | 60.0% | |
| !! | CCAAAGGGGTGCTCACTACC+AGG | - | chr2_2:1594258-1594277 | None:intergenic | 60.0% |
| ! | CCTGGTAGTGAGCACCCCTT+TGG | + | chr2_2:1594255-1594274 | Msa0229760:CDS | 60.0% |
| !! | ATCTTGATGGGCTCCGGTGG+CGG | + | chr2_2:1591070-1591089 | Msa0229760:CDS | 60.0% |
| ! | TGGCATCGAAAACCCGCCAC+CGG | - | chr2_2:1591086-1591105 | None:intergenic | 60.0% |
| !!! | GTGGCGGGTTTTCGATGCCA+AGG | + | chr2_2:1591086-1591105 | Msa0229760:CDS | 60.0% |
| ! | GGTTTTCGATGCCAAGGGCC+AGG | + | chr2_2:1591092-1591111 | Msa0229760:CDS | 60.0% |
| TCCTCATGCAGGTTCTCGGG+AGG | + | chr2_2:1592258-1592277 | Msa0229760:intron | 60.0% | |
| ACCTCCCGAGAACCTGCATG+AGG | - | chr2_2:1592262-1592281 | None:intergenic | 60.0% | |
| !! | CCAAAGGGGTGCTCACTACC+AGG | - | chr2_2:1594258-1594277 | None:intergenic | 60.0% |
| ! | CCTGGTAGTGAGCACCCCTT+TGG | + | chr2_2:1594255-1594274 | Msa0229760:CDS | 60.0% |
| !! | TCTTGATGGGCTCCGGTGGC+GGG | + | chr2_2:1591071-1591090 | Msa0229760:CDS | 65.0% |
| !! | TCTTGATGGGCTCCGGTGGC+GGG | + | chr2_2:1591071-1591090 | Msa0229760:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 1590617 | 1594713 | 1590617 | ID=Msa0229760;Name=Msa0229760 |
| chr2_2 | mRNA | 1590617 | 1594713 | 1590617 | ID=Msa0229760-mRNA-1;Parent=Msa0229760;Name=Msa0229760-mRNA-1;_AED=0.06;_eAED=0.06;_QI=112|0.8|0.66|1|0.6|0.66|6|264|187 |
| chr2_2 | exon | 1590617 | 1590696 | 1590617 | ID=Msa0229760-mRNA-1:exon:528;Parent=Msa0229760-mRNA-1 |
| chr2_2 | exon | 1590824 | 1590885 | 1590824 | ID=Msa0229760-mRNA-1:exon:529;Parent=Msa0229760-mRNA-1 |
| chr2_2 | exon | 1591042 | 1591113 | 1591042 | ID=Msa0229760-mRNA-1:exon:530;Parent=Msa0229760-mRNA-1 |
| chr2_2 | exon | 1592269 | 1592415 | 1592269 | ID=Msa0229760-mRNA-1:exon:531;Parent=Msa0229760-mRNA-1 |
| chr2_2 | exon | 1592677 | 1592769 | 1592677 | ID=Msa0229760-mRNA-1:exon:532;Parent=Msa0229760-mRNA-1 |
| chr2_2 | exon | 1594228 | 1594713 | 1594228 | ID=Msa0229760-mRNA-1:exon:533;Parent=Msa0229760-mRNA-1 |
| chr2_2 | five_prime_UTR | 1590617 | 1590696 | 1590617 | ID=Msa0229760-mRNA-1:five_prime_utr;Parent=Msa0229760-mRNA-1 |
| chr2_2 | five_prime_UTR | 1590824 | 1590855 | 1590824 | ID=Msa0229760-mRNA-1:five_prime_utr;Parent=Msa0229760-mRNA-1 |
| chr2_2 | CDS | 1590856 | 1590885 | 1590856 | ID=Msa0229760-mRNA-1:cds;Parent=Msa0229760-mRNA-1 |
| chr2_2 | CDS | 1591042 | 1591113 | 1591042 | ID=Msa0229760-mRNA-1:cds;Parent=Msa0229760-mRNA-1 |
| chr2_2 | CDS | 1592269 | 1592415 | 1592269 | ID=Msa0229760-mRNA-1:cds;Parent=Msa0229760-mRNA-1 |
| chr2_2 | CDS | 1592677 | 1592769 | 1592677 | ID=Msa0229760-mRNA-1:cds;Parent=Msa0229760-mRNA-1 |
| chr2_2 | CDS | 1594228 | 1594449 | 1594228 | ID=Msa0229760-mRNA-1:cds;Parent=Msa0229760-mRNA-1 |
| chr2_2 | three_prime_UTR | 1594450 | 1594713 | 1594450 | ID=Msa0229760-mRNA-1:three_prime_utr;Parent=Msa0229760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
