AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1332690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332690 MtrunA17_Chr4g0068871 98.418 632 8 1 1 630 1 632 0.0 1294
Msa1332690 MtrunA17_Chr4g0043091 25.478 471 260 15 144 534 46 505 1.49e-32 131
Msa1332690 MtrunA17_Chr4g0042171 28.009 432 225 16 180 536 86 506 3.28e-31 127
Msa1332690 MtrunA17_Chr4g0033311 27.913 412 218 13 181 522 103 505 4.53e-31 127
Msa1332690 MtrunA17_Chr4g0033201 28.058 417 227 14 181 530 100 510 4.26e-30 124
Msa1332690 MtrunA17_Chr4g0033191 27.103 428 234 14 181 540 107 524 4.94e-29 121
Msa1332690 MtrunA17_Chr3g0088441 25.870 460 247 16 145 522 57 504 5.71e-29 121
Msa1332690 MtrunA17_Chr4g0074551 26.464 427 230 14 181 535 113 527 6.69e-29 121
Msa1332690 MtrunA17_Chr4g0033321 25.882 425 230 12 181 532 97 509 1.08e-28 120
Msa1332690 MtrunA17_Chr4g0033401 26.024 415 222 12 181 522 98 500 3.35e-28 119
Msa1332690 MtrunA17_Chr2g0317841 26.107 429 237 16 181 541 95 511 5.70e-28 118
Msa1332690 MtrunA17_Chr3g0087261 25.647 425 245 10 174 534 94 511 1.15e-27 117
Msa1332690 MtrunA17_Chr4g0006131 25.874 429 215 13 181 535 105 504 1.17e-27 117
Msa1332690 MtrunA17_Chr4g0010501 25.743 404 231 12 181 522 88 484 1.25e-27 117
Msa1332690 MtrunA17_Chr6g0482071 26.230 427 240 12 181 539 101 520 1.36e-27 117
Msa1332690 MtrunA17_Chr6g0482131 26.406 409 228 14 181 522 100 502 1.36e-27 117
Msa1332690 MtrunA17_Chr4g0033331 26.392 413 223 13 181 522 103 505 1.66e-27 117
Msa1332690 MtrunA17_Chr2g0329201 25.980 408 221 15 181 517 95 492 1.76e-27 116
Msa1332690 MtrunA17_Chr3g0087271 28.000 425 235 13 174 534 95 512 1.80e-27 116
Msa1332690 MtrunA17_Chr4g0033231 27.157 394 228 13 181 526 105 487 1.92e-27 116
Msa1332690 MtrunA17_Chr4g0006111 26.291 426 208 14 181 530 128 523 2.01e-27 116
Msa1332690 MtrunA17_Chr2g0329191 26.139 417 234 14 181 530 98 507 4.12e-27 115
Msa1332690 MtrunA17_Chr4g0074561 26.168 428 234 15 181 536 99 516 4.87e-27 115
Msa1332690 MtrunA17_Chr2g0288071 25.882 425 235 12 181 535 131 545 5.60e-27 115
Msa1332690 MtrunA17_Chr2g0301231 27.229 415 206 15 186 530 2 390 8.45e-27 112
Msa1332690 MtrunA17_Chr4g0033341 26.450 431 235 13 167 522 110 533 2.84e-26 113
Msa1332690 MtrunA17_Chr3g0090131 26.764 411 234 11 181 533 84 485 2.85e-26 112
Msa1332690 MtrunA17_Chr4g0033271 26.379 417 234 14 181 530 99 509 5.63e-26 112
Msa1332690 MtrunA17_Chr7g0234131 26.777 422 226 13 181 535 132 537 1.01e-25 111
Msa1332690 MtrunA17_Chr4g0033261 27.750 400 218 15 181 526 105 487 1.02e-25 111
Msa1332690 MtrunA17_Chr7g0234111 27.007 411 220 15 186 531 137 532 1.33e-25 111
Msa1332690 MtrunA17_Chr7g0234091 25.708 424 243 13 169 531 120 532 1.88e-25 110
Msa1332690 MtrunA17_Chr2g0317821 25.754 431 236 15 181 541 95 511 2.02e-25 110
Msa1332690 MtrunA17_Chr2g0288021 24.292 424 241 11 181 534 98 511 2.03e-25 110
Msa1332690 MtrunA17_Chr3g0090111 25.325 462 255 15 145 533 38 482 3.77e-25 109
Msa1332690 MtrunA17_Chr6g0482081 25.362 414 227 14 181 522 100 503 7.68e-23 102
Msa1332690 MtrunA17_Chr2g0329321 23.990 421 213 13 181 530 102 486 7.93e-22 99.4
Msa1332690 MtrunA17_Chr1g0195611 25.799 407 238 12 181 530 88 487 1.04e-20 95.9
Msa1332690 MtrunA17_Chr6g0482951 24.471 425 246 15 173 534 102 514 5.25e-20 94.0
Msa1332690 MtrunA17_Chr5g0430451 23.131 428 217 14 181 530 103 496 2.51e-19 91.7
Msa1332690 MtrunA17_Chr5g0428831 24.265 408 244 10 181 530 88 488 2.45e-18 88.6
Msa1332690 MtrunA17_Chr5g0418871 30.534 131 85 2 181 310 46 171 1.70e-14 75.1
Msa1332690 MtrunA17_Chr3g0087201 24.299 321 169 12 268 522 22 334 2.10e-14 75.1
Msa1332690 MtrunA17_Chr1g0195641 29.050 179 117 4 181 354 88 261 3.86e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332690 AT3G06510.1 65.353 609 187 4 4 609 1 588 0.0 843
Msa1332690 AT3G06510.2 61.897 643 187 5 4 609 1 622 0.0 828
Msa1332690 AT3G60140.1 26.834 477 261 18 157 559 68 530 2.22e-31 129
Msa1332690 AT1G26560.1 25.219 456 247 15 160 532 64 508 2.37e-31 128
Msa1332690 AT3G60120.1 26.606 436 239 12 167 530 63 489 2.43e-31 129
Msa1332690 AT3G60130.3 28.431 408 222 14 181 530 42 437 2.97e-31 127
Msa1332690 AT3G60130.1 28.162 419 220 14 181 530 94 500 6.63e-31 127
Msa1332690 AT3G60130.2 28.162 419 220 14 181 530 42 448 7.49e-31 126
Msa1332690 AT5G44640.1 26.683 416 238 10 181 534 95 505 3.09e-30 125
Msa1332690 AT2G44470.3 27.033 455 244 17 164 542 75 517 4.66e-30 125
Msa1332690 AT2G44490.1 26.202 416 224 12 181 522 78 484 2.99e-29 122
Msa1332690 AT2G25630.1 26.434 401 241 10 181 534 94 487 4.52e-29 121
Msa1332690 AT5G42260.1 26.961 408 231 10 181 526 95 497 5.40e-29 121
Msa1332690 AT2G44450.1 26.442 416 238 12 181 534 95 504 1.93e-28 120
Msa1332690 AT1G66270.1 27.460 437 239 15 167 533 85 513 2.94e-28 119
Msa1332690 AT2G32860.2 24.726 457 253 17 159 532 125 573 3.86e-28 120
Msa1332690 AT2G32860.1 25.000 456 252 16 159 532 125 572 4.39e-28 119
Msa1332690 AT1G75940.1 24.236 458 252 12 156 533 78 520 6.86e-28 118
Msa1332690 AT3G09260.1 26.366 421 237 14 181 533 98 513 7.22e-28 118
Msa1332690 AT1G66280.1 28.132 423 226 16 181 533 99 513 7.29e-28 118
Msa1332690 AT3G21370.1 24.449 454 258 14 154 533 72 514 1.33e-27 117
Msa1332690 AT5G36890.1 25.828 453 261 13 145 530 35 479 2.29e-27 116
Msa1332690 AT5G36890.2 25.828 453 261 13 145 530 35 479 2.63e-27 116
Msa1332690 AT2G44460.1 26.824 425 224 16 181 530 92 504 5.08e-27 116
Msa1332690 AT4G21760.2 25.248 404 233 11 181 522 117 513 1.05e-26 115
Msa1332690 AT4G21760.1 25.381 394 235 11 181 522 117 503 3.50e-26 113
Msa1332690 AT1G52400.3 24.762 420 240 11 181 530 102 515 5.06e-26 112
Msa1332690 AT1G52400.1 24.762 420 240 11 181 530 102 515 5.06e-26 112
Msa1332690 AT1G66270.2 27.231 437 238 16 167 533 85 511 8.91e-26 112
Msa1332690 AT5G24550.1 24.711 433 251 14 164 526 78 505 3.52e-25 110
Msa1332690 AT5G28510.1 23.191 470 275 14 145 533 58 522 7.41e-25 109
Msa1332690 AT5G54570.1 25.708 424 231 14 180 530 93 505 8.67e-25 109
Msa1332690 AT2G44480.2 24.634 410 234 11 186 526 2 405 3.98e-24 105
Msa1332690 AT2G44480.3 24.634 410 234 11 186 526 135 538 5.06e-24 107
Msa1332690 AT5G54570.2 25.837 418 226 14 186 530 2 408 5.38e-24 105
Msa1332690 AT2G44480.1 24.634 410 234 11 186 526 104 507 5.68e-24 106
Msa1332690 AT5G24540.1 24.667 450 244 15 153 517 57 496 8.63e-24 106
Msa1332690 AT3G03640.1 24.356 427 248 15 174 530 91 512 1.08e-23 105
Msa1332690 AT1G61820.1 27.119 413 204 16 189 522 102 496 1.48e-23 105
Msa1332690 AT1G61810.1 26.202 416 220 18 181 522 97 499 1.13e-22 102
Msa1332690 AT1G61810.5 26.471 408 213 18 189 522 5 399 1.24e-22 101
Msa1332690 AT1G51470.1 24.879 414 239 11 181 531 106 510 3.31e-22 100
Msa1332690 AT1G61810.3 25.990 404 213 17 181 510 97 488 4.10e-22 100
Msa1332690 AT1G47600.2 24.460 417 236 12 181 531 106 509 8.00e-22 99.8
Msa1332690 AT1G47600.1 24.402 418 236 12 181 531 106 510 1.09e-21 99.4
Msa1332690 AT1G02850.1 27.532 385 231 14 181 530 87 458 3.82e-21 97.4
Msa1332690 AT1G02850.2 27.251 411 226 16 181 530 87 485 6.42e-20 94.0
Msa1332690 AT3G18070.1 22.947 414 245 13 181 530 93 496 6.56e-20 94.0
Msa1332690 AT3G18080.1 24.519 416 238 15 181 530 102 507 7.92e-20 93.6
Msa1332690 AT3G18070.3 22.947 414 239 13 181 530 93 490 7.13e-19 90.5
Msa1332690 AT4G27820.1 23.488 430 263 12 181 551 82 504 1.03e-18 90.1
Msa1332690 AT1G02850.5 25.806 434 226 16 181 530 87 508 1.29e-18 90.1
Msa1332690 AT3G62750.2 23.445 418 261 12 181 549 108 515 1.86e-18 89.4
Msa1332690 AT4G22100.1 24.694 409 242 12 181 530 81 482 2.00e-18 89.4
Msa1332690 AT3G62750.1 23.445 418 261 12 181 549 82 489 2.17e-18 89.0
Msa1332690 AT1G45191.2 24.645 422 237 15 181 536 88 494 3.88e-18 88.6
Msa1332690 AT4G27820.2 23.404 423 258 12 189 552 5 420 9.70e-18 86.7
Msa1332690 AT4G27820.3 23.404 423 258 12 189 552 5 420 9.70e-18 86.7
Msa1332690 AT4G27830.1 24.750 400 235 14 181 522 85 476 1.02e-17 87.0
Msa1332690 AT2G44450.2 25.562 356 200 11 241 534 1 353 1.29e-17 85.5
Msa1332690 AT2G44460.2 26.158 367 187 15 239 530 1 358 1.42e-17 86.3
Msa1332690 AT1G45191.4 24.265 408 250 15 181 536 88 488 1.46e-17 86.7
Msa1332690 AT1G02850.4 25.747 435 226 17 181 530 87 509 2.42e-17 85.9
Msa1332690 AT1G45191.6 23.684 418 251 15 181 536 88 499 3.28e-17 85.5
Msa1332690 AT1G45191.1 23.684 418 251 15 181 536 100 511 3.54e-17 85.5
Msa1332690 AT1G61820.3 26.630 368 177 15 234 522 4 357 9.85e-17 82.8
Msa1332690 AT1G60090.2 23.114 411 238 13 181 527 83 479 1.25e-15 80.5
Msa1332690 AT3G60140.2 25.698 358 191 15 157 452 68 412 4.28e-15 78.6
Msa1332690 AT3G18070.2 23.404 329 186 10 265 530 94 419 7.92e-15 77.4
Msa1332690 AT2G44470.1 24.422 389 207 16 164 477 75 451 2.36e-14 76.3
Msa1332690 AT1G60090.1 22.439 410 249 14 181 527 83 486 6.48e-14 75.1
Msa1332690 AT5G24540.2 28.125 160 101 4 153 301 57 213 9.29e-14 74.3
Msa1332690 AT2G44480.4 27.222 180 125 4 186 362 135 311 1.02e-13 73.9
Msa1332690 AT1G52400.2 22.466 365 208 10 181 476 102 460 2.30e-13 73.2
Msa1332690 AT3G62750.4 23.209 349 213 10 181 481 108 449 5.70e-13 72.0
Msa1332690 AT5G54570.3 28.272 191 120 6 180 362 93 274 7.49e-13 71.6
Msa1332690 AT3G62750.7 31.126 151 83 4 181 316 82 226 7.64e-13 70.9
Msa1332690 AT3G62750.8 31.126 151 83 4 181 316 82 226 7.64e-13 70.9
Msa1332690 AT2G44470.2 25.000 276 157 10 164 398 75 341 1.18e-12 70.5
Msa1332690 AT3G62750.3 31.126 151 83 4 181 316 108 252 1.42e-12 70.5
Msa1332690 AT1G02850.3 31.452 124 79 2 181 303 87 205 4.32e-12 68.9
Msa1332690 AT1G45191.3 29.365 126 83 2 181 305 88 208 5.03e-12 68.9
Msa1332690 AT1G45191.5 29.365 126 83 2 181 305 88 208 5.58e-12 68.6
Msa1332690 AT3G18070.7 23.226 310 172 10 284 530 1 307 1.33e-11 66.6

Find 184 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGACTTACAGATTCTTTA+AGG 0.139827 8_4:-52619552 None:intergenic
CCTTTCATTATTGCTGAAAA+TGG 0.160067 8_4:+52620960 Msa1332690:CDS
ATATAAGTATTGCTGTTAAT+TGG 0.180457 8_4:-52622866 None:intergenic
TCGTAGTTTCCAGAACTTAA+AGG 0.203574 8_4:+52617711 Msa1332690:five_prime_UTR
TCTGGACTATTTCTGATAAC+TGG 0.226760 8_4:+52621186 Msa1332690:CDS
CTGTGCTTGGTTACCTCTTC+TGG 0.248895 8_4:+52621168 Msa1332690:CDS
CGCCAATCTCTTTCTATATA+AGG 0.257777 8_4:-52622280 None:intergenic
TTCAACGATTCTCCCTAAAA+AGG 0.257864 8_4:+52622365 Msa1332690:CDS
TTAGATGCTTGTATCTTTCA+TGG 0.258804 8_4:-52620932 None:intergenic
TCCTGATACAGAACTAAAAT+TGG 0.270840 8_4:+52619453 Msa1332690:CDS
GGGAGGAGAGATTAAGGTTT+TGG 0.271168 8_4:+52619425 Msa1332690:intron
TGTACATCAGGAAGCGATTT+CGG 0.284236 8_4:+52620818 Msa1332690:intron
GATTCTTTAAGGCTGTTTAC+TGG 0.292666 8_4:-52619541 None:intergenic
GAAACAAGTAACAGTCCTTT+TGG 0.294344 8_4:-52622830 None:intergenic
GTACATCAGGAAGCGATTTC+GGG 0.300370 8_4:+52620819 Msa1332690:intron
TGTATGCTTACTTACTGTTC+TGG 0.302328 8_4:+52620236 Msa1332690:CDS
CTAAAATTGGCCAAGGATAC+TGG 0.313762 8_4:+52619466 Msa1332690:CDS
CCCTCGTTGTGCAGATGATA+TGG 0.327589 8_4:-52618524 None:intergenic
CATCTTCAATTCGGACTCAT+TGG 0.327888 8_4:-52622921 None:intergenic
TATCAGATTTAGTAGACTAT+TGG 0.332759 8_4:+52620186 Msa1332690:CDS
TTGTCCACAGCCCGATAAAA+TGG 0.337862 8_4:-52621483 None:intergenic
GAATAATGAATCTTGAGAAT+TGG 0.341853 8_4:-52622345 None:intergenic
GATGGATATGGTCCCAAGTT+TGG 0.341947 8_4:+52621218 Msa1332690:CDS
TTTATAGGCGTTAACTATTA+CGG 0.351253 8_4:+52620721 Msa1332690:CDS
TTCTATATAAGGCCGCTGTA+TGG 0.354083 8_4:-52622269 None:intergenic
AAAGACAGTGGATTATTTCA+TGG 0.355262 8_4:+52619895 Msa1332690:CDS
GCTATAAGTGGATTATCAAT+AGG 0.360657 8_4:+52619783 Msa1332690:CDS
ATCAATAGGGTTCGATCATA+TGG 0.366808 8_4:+52619797 Msa1332690:CDS
ATCTGCACAACGAGGGCTTA+AGG 0.372817 8_4:+52618531 Msa1332690:CDS
CGGCGAGTTTAGTGGCAGTT+AGG 0.376526 8_4:-52617800 None:intergenic
TTGTGCCAAGCAGTTACATT+AGG 0.381358 8_4:-52618652 None:intergenic
GTAGCAGCCTCTAGCATATC+AGG 0.383932 8_4:-52620278 None:intergenic
ATAGAAAGAGATTGGCGGTT+TGG 0.384777 8_4:+52622286 Msa1332690:CDS
ATACTCATACCTTTAAGTTC+TGG 0.386585 8_4:-52617720 None:intergenic
ATCAGATTTAGTAGACTATT+GGG 0.388367 8_4:+52620187 Msa1332690:CDS
AATGATGAGTACAGTGAATC+TGG 0.391568 8_4:+52620864 Msa1332690:CDS
TTGGATATTTCATCGATGAA+TGG 0.395990 8_4:-52620688 None:intergenic
AAGGACTGTTACTTGTTTCA+AGG 0.400317 8_4:+52622834 Msa1332690:three_prime_UTR
TACTAGAACGCTGAGTCATT+TGG 0.403300 8_4:-52622515 None:intergenic
TGGGAGTGGGCTGATGGATA+TGG 0.403938 8_4:+52621206 Msa1332690:CDS
TACTGTTCTGGAACCTGGCC+TGG 0.406059 8_4:+52620248 Msa1332690:CDS
CACATATTCACCTGAGTTCG+TGG 0.407646 8_4:-52620379 None:intergenic
AGCGCTACAGAGATTCATTC+TGG 0.412699 8_4:+52622592 Msa1332690:three_prime_UTR
TCATCACTCACTTCCACCCT+GGG 0.420608 8_4:+52619844 Msa1332690:CDS
ATGGGCTCTGCCACTGCTGA+TGG 0.420767 8_4:+52618487 Msa1332690:CDS
AACTGCGACAAGTCCAAACT+TGG 0.422766 8_4:-52621231 None:intergenic
TTCATCACTCACTTCCACCC+TGG 0.424450 8_4:+52619843 Msa1332690:CDS
TTACTTACTGTTCTGGAACC+TGG 0.428685 8_4:+52620243 Msa1332690:CDS
CTACAGGGTGTGCCTGTGCT+TGG 0.432531 8_4:+52621155 Msa1332690:intron
GAGAAATACATGGAAGTAGA+TGG 0.433306 8_4:+52618604 Msa1332690:CDS
GCAGAAAGTAGATGCTTTGA+TGG 0.437544 8_4:+52618468 Msa1332690:CDS
GGCTCTGCCACTGCTGATGG+TGG 0.438257 8_4:+52618490 Msa1332690:CDS
TCTGAACAATGCAGCAAAGC+TGG 0.438401 8_4:-52622693 None:intergenic
GCTGAACAAGAGAGTGTTGC+CGG 0.439290 8_4:+52618439 Msa1332690:CDS
ATATCCAATGCATGGCCTGC+TGG 0.439716 8_4:-52620325 None:intergenic
TCTGCACAACGAGGGCTTAA+GGG 0.439802 8_4:+52618532 Msa1332690:CDS
AGAATTGGCTTAAGTAATCC+TGG 0.442485 8_4:-52622330 None:intergenic
GTATTACTTTGAGTAGTAAG+AGG 0.447375 8_4:-52622468 None:intergenic
ATTACCGGTAATGTTGAAAT+CGG 0.448793 8_4:-52617934 None:intergenic
TGATATTGCTGCCGTTTCAC+TGG 0.452144 8_4:+52620645 Msa1332690:CDS
CGGGACTGCATTATATATCA+AGG 0.454242 8_4:+52622654 Msa1332690:three_prime_UTR
ACCTCCATAATCACCGGCCC+AGG 0.458461 8_4:-52619861 None:intergenic
GGGTAACAAGAAGTCTCTTA+AGG 0.459175 8_4:+52618552 Msa1332690:CDS
CAGGAAGCGATTTCGGGTGC+TGG 0.460871 8_4:+52620825 Msa1332690:intron
TTAGGTCAACTATGCTGCAT+TGG 0.461249 8_4:+52619757 Msa1332690:intron
AAATGGAAGAGAATTGCATT+CGG 0.461325 8_4:+52622634 Msa1332690:three_prime_UTR
AGGACAGGCTTGATGATGCT+TGG 0.463999 8_4:+52618407 Msa1332690:CDS
TGGATATTTCATCGATGAAT+GGG 0.467254 8_4:-52620687 None:intergenic
AGTAAATGCTCCAAGAGATA+TGG 0.467848 8_4:-52621014 None:intergenic
AACAGTAACACCAGTATCCT+TGG 0.478658 8_4:-52619476 None:intergenic
GAGATTTGATAAGTTATCAA+TGG 0.479234 8_4:-52622439 None:intergenic
AACTCATCAAATCAAATAGT+TGG 0.480032 8_4:+52620580 Msa1332690:CDS
TCTATATAAGGCCGCTGTAT+GGG 0.481662 8_4:-52622268 None:intergenic
AATGGAAGAGAATTGCATTC+GGG 0.483008 8_4:+52622635 Msa1332690:three_prime_UTR
CTCGCCGATTTCAACATTAC+CGG 0.484377 8_4:+52617930 Msa1332690:CDS
CAAGTGAGAGCTTACGGATG+TGG 0.488260 8_4:-52618679 None:intergenic
GGCCTTATATAGAAAGAGAT+TGG 0.490186 8_4:+52622278 Msa1332690:CDS
GAAGTCTCTTAAGGTAGCTA+TGG 0.490346 8_4:+52618561 Msa1332690:CDS
TCTTGTCTTCTTCTCTTTAG+CGG 0.491603 8_4:-52621460 None:intergenic
GATCCGCCGACCATATCTCT+TGG 0.492133 8_4:+52621004 Msa1332690:CDS
CTGGACTATTTCTGATAACT+GGG 0.492878 8_4:+52621187 Msa1332690:CDS
TGTATTAATGATATGCCAAA+AGG 0.493119 8_4:+52622815 Msa1332690:three_prime_UTR
CTATAAGTGGATTATCAATA+GGG 0.493867 8_4:+52619784 Msa1332690:CDS
CACTCACTTCCACCCTGGGC+CGG 0.494939 8_4:+52619848 Msa1332690:CDS
TAAAGCTCCGGCGAGTTTAG+TGG 0.495185 8_4:-52617808 None:intergenic
ATCAGGATGTCCACCAGGCC+AGG 0.496467 8_4:-52620261 None:intergenic
AACATGCGATATAAGCCATC+AGG 0.498179 8_4:-52620900 None:intergenic
CATCGATAGGGGAAGTGAAA+CGG 0.498202 8_4:-52617893 None:intergenic
GCTACTTCCGCACTTCCTAC+AGG 0.498844 8_4:+52620296 Msa1332690:CDS
TGATTATGGAGGTTGGAAGC+TGG 0.500135 8_4:+52619871 Msa1332690:CDS
ATATCTAGAAATGAATGAAA+AGG 0.501587 8_4:+52617568 Msa1332690:five_prime_UTR
GTTGAAATCGGCGAGAGTAT+CGG 0.506142 8_4:-52617922 None:intergenic
TTAGAAAACAGATGGTAAGA+AGG 0.506880 8_4:-52621287 None:intergenic
GATAACTGGGAGTGGGCTGA+TGG 0.509425 8_4:+52621200 Msa1332690:CDS
TCCGTGCAAGATTATTTGCT+CGG 0.509949 8_4:-52621256 None:intergenic
ATCATCGCATGTAACTTTAC+CGG 0.510088 8_4:-52621406 None:intergenic
TTATGAGATGGATGACCTCC+AGG 0.512096 8_4:+52622312 Msa1332690:CDS
TTTCTCAAATCCTCTGATCA+TGG 0.512160 8_4:-52618587 None:intergenic
CTGCATTGGAGCGCTATAAG+TGG 0.513111 8_4:+52619771 Msa1332690:CDS
GGGTGCTGGCCTGAAGCTTG+TGG 0.519846 8_4:+52620839 Msa1332690:CDS
TGAAACTATCGTCATGGTAG+TGG 0.527279 8_4:-52617772 None:intergenic
ATCTACTTTCTGCTCAGCAC+CGG 0.527534 8_4:-52618458 None:intergenic
GCTCTGCCACTGCTGATGGT+GGG 0.527582 8_4:+52618491 Msa1332690:CDS
ATACATGGAAGTAGATGGAC+AGG 0.527787 8_4:+52618609 Msa1332690:CDS
TTTGTTGCGAAAACGAGAGA+AGG 0.531839 8_4:-52617862 None:intergenic
CACCGGCACATGTTGAGGAC+AGG 0.532272 8_4:+52618392 Msa1332690:CDS
GGGCCGGTGATTATGGAGGT+TGG 0.535413 8_4:+52619864 Msa1332690:CDS
AGCCTGTCCTCAACATGTGC+CGG 0.537611 8_4:-52618394 None:intergenic
TCTAGAAATGAATGAAAAGG+AGG 0.538209 8_4:+52617571 Msa1332690:five_prime_UTR
GTATCGGAGGATTCATCGAT+AGG 0.538658 8_4:-52617906 None:intergenic
CAGAGGATTTGAGAAATACA+TGG 0.540066 8_4:+52618594 Msa1332690:CDS
GCGATGATCGTGATAACGCT+TGG 0.540309 8_4:+52621421 Msa1332690:CDS
TGATTGCAGGTTGTAAGTAC+CGG 0.546506 8_4:+52621387 Msa1332690:intron
TATCGGAGGATTCATCGATA+GGG 0.548818 8_4:-52617905 None:intergenic
GGTTCGATCATATGGAATGA+AGG 0.554841 8_4:+52619805 Msa1332690:CDS
CGAGTTGATCATTCTTGTGA+GGG 0.561286 8_4:-52622545 None:intergenic
GATATCTGTTGCACACTCAA+AGG 0.564342 8_4:+52620343 Msa1332690:CDS
AGATTCTCATCATCTCATCT+CGG 0.564656 8_4:+52617638 Msa1332690:five_prime_UTR
AGAGAAGGAAAATGCATTGG+CGG 0.565039 8_4:-52617847 None:intergenic
CTATTTCTGATAACTGGGAG+TGG 0.565300 8_4:+52621192 Msa1332690:CDS
CAATGAATTAGCCAGTGAAA+CGG 0.566575 8_4:-52620656 None:intergenic
AGCAATATCAAACAGACCAT+AGG 0.568096 8_4:-52620632 None:intergenic
AGCATATCAGGATGTCCACC+AGG 0.569201 8_4:-52620266 None:intergenic
CTTTGGTCTAGCGACAGCAC+CGG 0.569537 8_4:+52618375 Msa1332690:CDS
TTCTGGAAACTACGAAGAAG+AGG 0.569890 8_4:-52617703 None:intergenic
GACAGCACCGGCACATGTTG+AGG 0.574188 8_4:+52618387 Msa1332690:CDS
TATCAGAAATAGTCCAGAAG+AGG 0.574316 8_4:-52621181 None:intergenic
AGGCTGTTTACTGGCTCATG+AGG 0.574448 8_4:-52619532 None:intergenic
CTTATATAGAAAGAGATTGG+CGG 0.576039 8_4:+52622281 Msa1332690:CDS
ATCGTCATGGTAGTGGCGAG+TGG 0.576491 8_4:-52617765 None:intergenic
ACATTCCTAATGTAACTGCT+TGG 0.577747 8_4:+52618647 Msa1332690:CDS
TAGAAAACAGATGGTAAGAA+GGG 0.578554 8_4:-52621286 None:intergenic
CTAGAAATGAATGAAAAGGA+GGG 0.578721 8_4:+52617572 Msa1332690:five_prime_UTR
TACAAACTTTAGAAAACAGA+TGG 0.582069 8_4:-52621295 None:intergenic
CAGAAGAGGTAACCAAGCAC+AGG 0.582991 8_4:-52621167 None:intergenic
GCAATATCAAACAGACCATA+GGG 0.584114 8_4:-52620631 None:intergenic
GTCTCTTAAGGTAGCTATGG+AGG 0.585522 8_4:+52618564 Msa1332690:CDS
AAGTAAGCATACAGAAGACA+TGG 0.587256 8_4:-52620226 None:intergenic
ATGATTACATCCACGAACTC+AGG 0.587432 8_4:+52620369 Msa1332690:CDS
TGCAACAGATATCCAATGCA+TGG 0.588834 8_4:-52620333 None:intergenic
TACAGAACTAAAATTGGCCA+AGG 0.590023 8_4:+52619459 Msa1332690:CDS
AGTGAGAGTGACTAAAGCTC+CGG 0.590174 8_4:-52617820 None:intergenic
ACCGAGCAAATAATCTTGCA+CGG 0.590207 8_4:+52621255 Msa1332690:CDS
TCAATGGCTAAGATCAAAGC+GGG 0.590429 8_4:-52622423 None:intergenic
TATTTCTGATAACTGGGAGT+GGG 0.592426 8_4:+52621193 Msa1332690:CDS
ATCATCTCATCTCGGAACAG+TGG 0.594257 8_4:+52617646 Msa1332690:five_prime_UTR
ACGAGAGAAGGAAAATGCAT+TGG 0.595701 8_4:-52617850 None:intergenic
TCGTCATGGTAGTGGCGAGT+GGG 0.597939 8_4:-52617764 None:intergenic
CTTCCAACCTCCATAATCAC+CGG 0.604506 8_4:-52619867 None:intergenic
TGTTCTGGAACCTGGCCTGG+TGG 0.605992 8_4:+52620251 Msa1332690:CDS
CAGAAAGTAGATGCTTTGAT+GGG 0.609720 8_4:+52618469 Msa1332690:CDS
CACAAGAATGATCAACTCGA+TGG 0.612292 8_4:+52622549 Msa1332690:three_prime_UTR
GCGGTTTGGTCATTATGAGA+TGG 0.613726 8_4:+52622300 Msa1332690:CDS
TCGAGTTGATCATTCTTGTG+AGG 0.615622 8_4:-52622546 None:intergenic
CCCTGGGCCGGTGATTATGG+AGG 0.616382 8_4:+52619860 Msa1332690:CDS
ATCGGAGGATTCATCGATAG+GGG 0.619526 8_4:-52617904 None:intergenic
GGACGTGGAGTATATCCTGA+TGG 0.620310 8_4:+52620885 Msa1332690:CDS
TCTTTAAATTATGTCTCACA+TGG 0.621313 8_4:-52617518 None:intergenic
ATGGAAGTAGATGGACAGGA+AGG 0.625915 8_4:+52618613 Msa1332690:CDS
GAAGAGTGAAACTATCGTCA+TGG 0.627384 8_4:-52617778 None:intergenic
GCTATGGAGGCCATGATCAG+AGG 0.630260 8_4:+52618577 Msa1332690:CDS
AACAGATGGTAAGAAGGGCG+AGG 0.630415 8_4:-52621281 None:intergenic
TGTTTATGCAGCTATGATCG+AGG 0.630998 8_4:+52621040 Msa1332690:CDS
TTGAGACCCACCATCAGCAG+TGG 0.633108 8_4:-52618497 None:intergenic
CCTCCATAATCACCGGCCCA+GGG 0.633146 8_4:-52619860 None:intergenic
ATCAATGGCTAAGATCAAAG+CGG 0.634257 8_4:-52622424 None:intergenic
CTAACTGCCACTAAACTCGC+CGG 0.637113 8_4:+52617801 Msa1332690:CDS
AGTAAGCATACAGAAGACAT+GGG 0.649848 8_4:-52620225 None:intergenic
AAATAACAGAAGAGAACACA+TGG 0.652388 8_4:+52617601 Msa1332690:five_prime_UTR
GCCTGCTGGAAAACACCTGT+AGG 0.655259 8_4:-52620311 None:intergenic
GCCATATCATCTGCACAACG+AGG 0.657293 8_4:+52618523 Msa1332690:CDS
GAAGAGGAGAAAGAGAAGAA+CGG 0.658092 8_4:-52617687 None:intergenic
TGGACATCCTGATATGCTAG+AGG 0.661739 8_4:+52620271 Msa1332690:CDS
ACTGCGACAAGTCCAAACTT+GGG 0.667272 8_4:-52621230 None:intergenic
GAGTACAGTGAATCTGGACG+TGG 0.667884 8_4:+52620870 Msa1332690:CDS
CCATATCATCTGCACAACGA+GGG 0.671149 8_4:+52618524 Msa1332690:CDS
TTGGAAGCTGGAAAAGACAG+TGG 0.672743 8_4:+52619883 Msa1332690:CDS
GAAAACACCTGTAGGAAGTG+CGG 0.675092 8_4:-52620303 None:intergenic
GAAATCGGCGAGAGTATCGG+AGG 0.675982 8_4:-52617919 None:intergenic
GCTCCAAGAGATATGGTCGG+CGG 0.699012 8_4:-52621007 None:intergenic
AATGCTCCAAGAGATATGGT+CGG 0.704069 8_4:-52621010 None:intergenic
GTAAGCATACAGAAGACATG+GGG 0.722281 8_4:-52620224 None:intergenic
GACTTGATGAACCCATACAG+CGG 0.730478 8_4:+52622257 Msa1332690:CDS
ATTGGCTTAAGTAATCCTGG+AGG 0.768810 8_4:-52622327 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTAAATAAGGAATTAT+TGG - chr8_4:52619256-52619275 None:intergenic 10.0%
!! GTCATTAATAAAATAGATTA+AGG + chr8_4:52618048-52618067 Msa1332690:intron 15.0%
!! AATAAATTTGTAACAAATCA+AGG + chr8_4:52618907-52618926 Msa1332690:intron 15.0%
!!! TAATATTTCCTTTGTAATTT+TGG + chr8_4:52621343-52621362 Msa1332690:intron 15.0%
!!! AATATTTCCTTTGTAATTTT+GGG + chr8_4:52621344-52621363 Msa1332690:intron 15.0%
!! TAATCCATTCTATTTATAAT+TGG - chr8_4:52621766-52621785 None:intergenic 15.0%
!!! ATGAATACTATATTTTTCTT+AGG + chr8_4:52622178-52622197 Msa1332690:intron 15.0%
!!! TGAATACTATATTTTTCTTA+GGG + chr8_4:52622179-52622198 Msa1332690:intron 15.0%
!!! ATTTTTTTGCTTATTGAAAA+TGG + chr8_4:52622617-52622636 Msa1332690:three_prime_UTR 15.0%
!! ATATCTAGAAATGAATGAAA+AGG + chr8_4:52617568-52617587 Msa1332690:five_prime_UTR 20.0%
!! ATCATAATAGAGATTATTAC+CGG - chr8_4:52617952-52617971 None:intergenic 20.0%
!! CTCTATTATGATTCATTAAT+TGG + chr8_4:52617960-52617979 Msa1332690:intron 20.0%
!! TTATCATATAATGTCATCTT+TGG + chr8_4:52618118-52618137 Msa1332690:intron 20.0%
!! ATATGGTAGTTACAAATAAA+TGG + chr8_4:52618859-52618878 Msa1332690:intron 20.0%
!!! CAAGATATCATGAAATATTT+TGG - chr8_4:52619222-52619241 None:intergenic 20.0%
!!! AAAATTAATGTCTGATTTTC+AGG + chr8_4:52619404-52619423 Msa1332690:intron 20.0%
!!! AAATTAATGTCTGATTTTCA+GGG + chr8_4:52619405-52619424 Msa1332690:intron 20.0%
!!! TAAAGTTTGAGATAAAACTT+TGG - chr8_4:52619669-52619688 None:intergenic 20.0%
!! CATTCTATTTATAATTGGTT+CGG - chr8_4:52621761-52621780 None:intergenic 20.0%
!!! AGATTTCTTTTTCCTTTTTA+GGG - chr8_4:52622380-52622399 None:intergenic 20.0%
!!! ATATAAGTATTGCTGTTAAT+TGG - chr8_4:52622869-52622888 None:intergenic 20.0%
! TCTTTAAATTATGTCTCACA+TGG - chr8_4:52617521-52617540 None:intergenic 25.0%
!! TTTTTGCAGAAGAAGAAAAT+GGG + chr8_4:52618347-52618366 Msa1332690:intron 25.0%
! TGATTCTGATTGATTGTATT+AGG - chr8_4:52618888-52618907 None:intergenic 25.0%
! ATTCAACAACATATCACTTA+TGG - chr8_4:52619059-52619078 None:intergenic 25.0%
!!! TGAAATATTTTGGATATGCT+AGG - chr8_4:52619212-52619231 None:intergenic 25.0%
! TTGCTTTCTTAAACTGAAAA+TGG + chr8_4:52619294-52619313 Msa1332690:intron 25.0%
!! TTTGACTTACAGATTCTTTA+AGG - chr8_4:52619555-52619574 None:intergenic 25.0%
! TAACTAATCATCATACAGAA+AGG - chr8_4:52619584-52619603 None:intergenic 25.0%
! CATAGTTTAGCATATATTAG+TGG + chr8_4:52619614-52619633 Msa1332690:intron 25.0%
!!! CTATAAGTGGATTATCAATA+GGG + chr8_4:52619784-52619803 Msa1332690:CDS 25.0%
!! ATTATTTCATGGATTTTACC+AGG + chr8_4:52619906-52619925 Msa1332690:CDS 25.0%
!!! TCATCATGTTATCTAGTTTT+AGG + chr8_4:52620085-52620104 Msa1332690:intron 25.0%
!!! CATCATGTTATCTAGTTTTA+GGG + chr8_4:52620086-52620105 Msa1332690:intron 25.0%
! TATCAGATTTAGTAGACTAT+TGG + chr8_4:52620186-52620205 Msa1332690:CDS 25.0%
! ATCAGATTTAGTAGACTATT+GGG + chr8_4:52620187-52620206 Msa1332690:CDS 25.0%
! AACTCATCAAATCAAATAGT+TGG + chr8_4:52620580-52620599 Msa1332690:CDS 25.0%
! TTTATAGGCGTTAACTATTA+CGG + chr8_4:52620721-52620740 Msa1332690:CDS 25.0%
!! CATTTTCAGCAATAATGAAA+GGG - chr8_4:52620962-52620981 None:intergenic 25.0%
!! TACAAACTTTAGAAAACAGA+TGG - chr8_4:52621298-52621317 None:intergenic 25.0%
!!! ATTTTGGGTGACATTTTTAA+TGG + chr8_4:52621359-52621378 Msa1332690:intron 25.0%
! AAAAATGGTTTAATGTTAGC+AGG + chr8_4:52621504-52621523 Msa1332690:CDS 25.0%
! CGAACCAATTATAAATAGAA+TGG + chr8_4:52621759-52621778 Msa1332690:intron 25.0%
! GCAACTTATAAAATTAAGGT+TGG - chr8_4:52621798-52621817 None:intergenic 25.0%
!! ACCTTAATTTTATAAGTTGC+AGG + chr8_4:52621798-52621817 Msa1332690:intron 25.0%
! ACCTGCAACTTATAAAATTA+AGG - chr8_4:52621802-52621821 None:intergenic 25.0%
!! AATTTTATAAGTTGCAGGTA+AGG + chr8_4:52621803-52621822 Msa1332690:intron 25.0%
!! TCTAATTTTGTTAGCTAAGT+GGG - chr8_4:52622102-52622121 None:intergenic 25.0%
!! TTCTAATTTTGTTAGCTAAG+TGG - chr8_4:52622103-52622122 None:intergenic 25.0%
!! ATACTATATTTTTCTTAGGG+TGG + chr8_4:52622182-52622201 Msa1332690:intron 25.0%
! GAATAATGAATCTTGAGAAT+TGG - chr8_4:52622348-52622367 None:intergenic 25.0%
!! GAGATTTCTTTTTCCTTTTT+AGG - chr8_4:52622381-52622400 None:intergenic 25.0%
! AAGGAAAAAGAAATCTCAAA+AGG + chr8_4:52622384-52622403 Msa1332690:CDS 25.0%
! GAGATTTGATAAGTTATCAA+TGG - chr8_4:52622442-52622461 None:intergenic 25.0%
!! TTTTGGCATATCATTAATAC+AGG - chr8_4:52622816-52622835 None:intergenic 25.0%
! TGTATTAATGATATGCCAAA+AGG + chr8_4:52622815-52622834 Msa1332690:three_prime_UTR 25.0%
TCTAGAAATGAATGAAAAGG+AGG + chr8_4:52617571-52617590 Msa1332690:five_prime_UTR 30.0%
CTAGAAATGAATGAAAAGGA+GGG + chr8_4:52617572-52617591 Msa1332690:five_prime_UTR 30.0%
AAATAACAGAAGAGAACACA+TGG + chr8_4:52617601-52617620 Msa1332690:five_prime_UTR 30.0%
! ATACTCATACCTTTAAGTTC+TGG - chr8_4:52617723-52617742 None:intergenic 30.0%
ATTACCGGTAATGTTGAAAT+CGG - chr8_4:52617937-52617956 None:intergenic 30.0%
AAATAGATTAAGGCTCTCTT+TGG + chr8_4:52618058-52618077 Msa1332690:intron 30.0%
TAATAAATAAGCTGCTATCC+TGG + chr8_4:52618235-52618254 Msa1332690:intron 30.0%
TTTCATAAGTTCTCCAAACA+TGG + chr8_4:52618312-52618331 Msa1332690:intron 30.0%
ACAAACAAATAAGCCATGTT+TGG - chr8_4:52618328-52618347 None:intergenic 30.0%
! GTTTTTGCAGAAGAAGAAAA+TGG + chr8_4:52618346-52618365 Msa1332690:intron 30.0%
!! GAAGAAAATGGGTTTTTCTT+TGG + chr8_4:52618358-52618377 Msa1332690:CDS 30.0%
ACTTCAAAATCCAATGTTGA+CGG - chr8_4:52618727-52618746 None:intergenic 30.0%
!!! ACATTGGATTTTGAAGTGAA+AGG + chr8_4:52618730-52618749 Msa1332690:intron 30.0%
!!! CATTGGATTTTGAAGTGAAA+GGG + chr8_4:52618731-52618750 Msa1332690:intron 30.0%
GTAAGCTAATATTGTTGTCA+AGG + chr8_4:52618770-52618789 Msa1332690:intron 30.0%
TAGAATCTTCTGTAAAGTCT+TGG - chr8_4:52618829-52618848 None:intergenic 30.0%
TGTAACTACCATATCTTGTA+TGG - chr8_4:52618853-52618872 None:intergenic 30.0%
! TTTGGTTTCCATAATCAAGT+TGG - chr8_4:52618983-52619002 None:intergenic 30.0%
ACCAAAGTCTACAAATGTTT+AGG + chr8_4:52618997-52619016 Msa1332690:intron 30.0%
ACCTAAACATTTGTAGACTT+TGG - chr8_4:52619001-52619020 None:intergenic 30.0%
TACAAATGTTTAGGTGTATG+AGG + chr8_4:52619006-52619025 Msa1332690:intron 30.0%
ATCGTATTTGAATTGCACTT+TGG + chr8_4:52619131-52619150 Msa1332690:intron 30.0%
TCCTGATACAGAACTAAAAT+TGG + chr8_4:52619453-52619472 Msa1332690:CDS 30.0%
! TGTATGATGATTAGTTATCG+TGG + chr8_4:52619587-52619606 Msa1332690:intron 30.0%
GTTTAGCATATATTAGTGGA+TGG + chr8_4:52619618-52619637 Msa1332690:intron 30.0%
ACTTATGTAAGCAATTCACT+TGG + chr8_4:52619725-52619744 Msa1332690:intron 30.0%
!! GCTATAAGTGGATTATCAAT+AGG + chr8_4:52619783-52619802 Msa1332690:CDS 30.0%
!! AAAGACAGTGGATTATTTCA+TGG + chr8_4:52619895-52619914 Msa1332690:CDS 30.0%
ATACAAACAAATGCCACTAA+AGG - chr8_4:52619940-52619959 None:intergenic 30.0%
TGGATATTTCATCGATGAAT+GGG - chr8_4:52620690-52620709 None:intergenic 30.0%
TTGGATATTTCATCGATGAA+TGG - chr8_4:52620691-52620710 None:intergenic 30.0%
CGATGAAATATCCAAAAAGA+TGG + chr8_4:52620696-52620715 Msa1332690:CDS 30.0%
! TCCAAAAAGATGGACTTTAT+AGG + chr8_4:52620706-52620725 Msa1332690:CDS 30.0%
TTAGATGCTTGTATCTTTCA+TGG - chr8_4:52620935-52620954 None:intergenic 30.0%
! CCATTTTCAGCAATAATGAA+AGG - chr8_4:52620963-52620982 None:intergenic 30.0%
CCTTTCATTATTGCTGAAAA+TGG + chr8_4:52620960-52620979 Msa1332690:CDS 30.0%
TAGAAAACAGATGGTAAGAA+GGG - chr8_4:52621289-52621308 None:intergenic 30.0%
TTAGAAAACAGATGGTAAGA+AGG - chr8_4:52621290-52621309 None:intergenic 30.0%
AATGTCACCCAAAATTACAA+AGG - chr8_4:52621354-52621373 None:intergenic 30.0%
! AGAAGACAAGACCATTTTAT+CGG + chr8_4:52621472-52621491 Msa1332690:CDS 30.0%
!! AATGCGTTTCTATTGATTTG+TGG + chr8_4:52621566-52621585 Msa1332690:intron 30.0%
!! ATGCGTTTCTATTGATTTGT+GGG + chr8_4:52621567-52621586 Msa1332690:intron 30.0%
TCTAGTAATATGTTGGCATA+TGG - chr8_4:52621679-52621698 None:intergenic 30.0%
CGGTTTATCTAGTAATATGT+TGG - chr8_4:52621686-52621705 None:intergenic 30.0%
AACACATAACTTCCAAAGAA+TGG + chr8_4:52622046-52622065 Msa1332690:intron 30.0%
!!! AATATTGCTCTAGCTTTTAC+AGG + chr8_4:52622121-52622140 Msa1332690:intron 30.0%
TTCATGTTCAATTTGCCTAT+TGG - chr8_4:52622163-52622182 None:intergenic 30.0%
CTTATATAGAAAGAGATTGG+CGG + chr8_4:52622281-52622300 Msa1332690:CDS 30.0%
GTATTACTTTGAGTAGTAAG+AGG - chr8_4:52622471-52622490 None:intergenic 30.0%
! ACTCGATGGAATTTTACATA+TGG + chr8_4:52622563-52622582 Msa1332690:three_prime_UTR 30.0%
AAATGGAAGAGAATTGCATT+CGG + chr8_4:52622634-52622653 Msa1332690:three_prime_UTR 30.0%
AGATTCTCATCATCTCATCT+CGG + chr8_4:52617638-52617657 Msa1332690:five_prime_UTR 35.0%
TCGTAGTTTCCAGAACTTAA+AGG + chr8_4:52617711-52617730 Msa1332690:five_prime_UTR 35.0%
!! TTCATCATAAGAAGCGCTTA+TGG + chr8_4:52618163-52618182 Msa1332690:intron 35.0%
CAGAAAGTAGATGCTTTGAT+GGG + chr8_4:52618469-52618488 Msa1332690:CDS 35.0%
TTTCTCAAATCCTCTGATCA+TGG - chr8_4:52618590-52618609 None:intergenic 35.0%
CAGAGGATTTGAGAAATACA+TGG + chr8_4:52618594-52618613 Msa1332690:CDS 35.0%
GAGAAATACATGGAAGTAGA+TGG + chr8_4:52618604-52618623 Msa1332690:CDS 35.0%
ACATTCCTAATGTAACTGCT+TGG + chr8_4:52618647-52618666 Msa1332690:CDS 35.0%
GATTCTAGCCATACAAGATA+TGG + chr8_4:52618842-52618861 Msa1332690:intron 35.0%
GGAGTAAACCAACTTGATTA+TGG + chr8_4:52618972-52618991 Msa1332690:intron 35.0%
GAAAAGTTACTCTTCGTCAT+AGG + chr8_4:52619316-52619335 Msa1332690:intron 35.0%
!! TTAATGTCTGATTTTCAGGG+AGG + chr8_4:52619408-52619427 Msa1332690:intron 35.0%
!!! GCCAATTTTAGTTCTGTATC+AGG - chr8_4:52619457-52619476 None:intergenic 35.0%
TACAGAACTAAAATTGGCCA+AGG + chr8_4:52619459-52619478 Msa1332690:CDS 35.0%
!!! TGGTGTTACTGTTTTTCGTA+TGG + chr8_4:52619486-52619505 Msa1332690:CDS 35.0%
!!! GGTGTTACTGTTTTTCGTAT+GGG + chr8_4:52619487-52619506 Msa1332690:CDS 35.0%
! TTTTTCGTATGGGAATTGAC+TGG + chr8_4:52619497-52619516 Msa1332690:CDS 35.0%
!! GATTCTTTAAGGCTGTTTAC+TGG - chr8_4:52619544-52619563 None:intergenic 35.0%
ATCAATAGGGTTCGATCATA+TGG + chr8_4:52619797-52619816 Msa1332690:CDS 35.0%
GATTCGCAAATATGCTACAT+GGG - chr8_4:52620049-52620068 None:intergenic 35.0%
AGATTCGCAAATATGCTACA+TGG - chr8_4:52620050-52620069 None:intergenic 35.0%
ACATGTTTCTCAATCAATGC+AGG + chr8_4:52620147-52620166 Msa1332690:intron 35.0%
AGTAAGCATACAGAAGACAT+GGG - chr8_4:52620228-52620247 None:intergenic 35.0%
AAGTAAGCATACAGAAGACA+TGG - chr8_4:52620229-52620248 None:intergenic 35.0%
TGTATGCTTACTTACTGTTC+TGG + chr8_4:52620236-52620255 Msa1332690:CDS 35.0%
GTCAGAGGTTTCAGAATTTA+TGG + chr8_4:52620401-52620420 Msa1332690:intron 35.0%
CTAGTTGCACTAGAATGATA+TGG - chr8_4:52620437-52620456 None:intergenic 35.0%
TCAGACTGCTAAATGAGAAA+GGG - chr8_4:52620478-52620497 None:intergenic 35.0%
TTCAGACTGCTAAATGAGAA+AGG - chr8_4:52620479-52620498 None:intergenic 35.0%
GCAATATCAAACAGACCATA+GGG - chr8_4:52620634-52620653 None:intergenic 35.0%
AGCAATATCAAACAGACCAT+AGG - chr8_4:52620635-52620654 None:intergenic 35.0%
CAATGAATTAGCCAGTGAAA+CGG - chr8_4:52620659-52620678 None:intergenic 35.0%
! GCCTATAAAGTCCATCTTTT+TGG - chr8_4:52620710-52620729 None:intergenic 35.0%
TAGGATCGAAAAATCAAACC+TGG - chr8_4:52620747-52620766 None:intergenic 35.0%
ATCGTACAGAATGCATTGTT+AGG - chr8_4:52620766-52620785 None:intergenic 35.0%
ACGATTCTAACATGTACATC+AGG + chr8_4:52620806-52620825 Msa1332690:intron 35.0%
AATGATGAGTACAGTGAATC+TGG + chr8_4:52620864-52620883 Msa1332690:CDS 35.0%
AGTAAATGCTCCAAGAGATA+TGG - chr8_4:52621017-52621036 None:intergenic 35.0%
CTTCTTGTAACTGTTCTACA+GGG + chr8_4:52621140-52621159 Msa1332690:intron 35.0%
TATCAGAAATAGTCCAGAAG+AGG - chr8_4:52621184-52621203 None:intergenic 35.0%
!! TCTGGACTATTTCTGATAAC+TGG + chr8_4:52621186-52621205 Msa1332690:CDS 35.0%
!! CTGGACTATTTCTGATAACT+GGG + chr8_4:52621187-52621206 Msa1332690:CDS 35.0%
! TATTTCTGATAACTGGGAGT+GGG + chr8_4:52621193-52621212 Msa1332690:CDS 35.0%
ATCATCGCATGTAACTTTAC+CGG - chr8_4:52621409-52621428 None:intergenic 35.0%
TCTTGTCTTCTTCTCTTTAG+CGG - chr8_4:52621463-52621482 None:intergenic 35.0%
! GAAGACAAGACCATTTTATC+GGG + chr8_4:52621473-52621492 Msa1332690:CDS 35.0%
!! TGCGTTTCTATTGATTTGTG+GGG + chr8_4:52621568-52621587 Msa1332690:intron 35.0%
TATGCTCATATCAAGCATAG+AGG - chr8_4:52621608-52621627 None:intergenic 35.0%
CTGTCAAAGGTAGTAACTAT+CGG - chr8_4:52621706-52621725 None:intergenic 35.0%
CTAATACAGGCTTGATTGTT+TGG + chr8_4:52621864-52621883 Msa1332690:intron 35.0%
TTCAGTTTCACACCATTCTT+TGG - chr8_4:52622061-52622080 None:intergenic 35.0%
CTTACCAAACAAACTCCAAT+AGG + chr8_4:52622145-52622164 Msa1332690:intron 35.0%
! TTTGCCTATTGGAGTTTGTT+TGG - chr8_4:52622152-52622171 None:intergenic 35.0%
! GGCCTTATATAGAAAGAGAT+TGG + chr8_4:52622278-52622297 Msa1332690:CDS 35.0%
CGCCAATCTCTTTCTATATA+AGG - chr8_4:52622283-52622302 None:intergenic 35.0%
! AGAATTGGCTTAAGTAATCC+TGG - chr8_4:52622333-52622352 None:intergenic 35.0%
TTCAACGATTCTCCCTAAAA+AGG + chr8_4:52622365-52622384 Msa1332690:CDS 35.0%
ATCAATGGCTAAGATCAAAG+CGG - chr8_4:52622427-52622446 None:intergenic 35.0%
AATGGAAGAGAATTGCATTC+GGG + chr8_4:52622635-52622654 Msa1332690:three_prime_UTR 35.0%
! GAAACAAGTAACAGTCCTTT+TGG - chr8_4:52622833-52622852 None:intergenic 35.0%
! AAGGACTGTTACTTGTTTCA+AGG + chr8_4:52622834-52622853 Msa1332690:three_prime_UTR 35.0%
GAAGAGGAGAAAGAGAAGAA+CGG - chr8_4:52617690-52617709 None:intergenic 40.0%
! TTCTGGAAACTACGAAGAAG+AGG - chr8_4:52617706-52617725 None:intergenic 40.0%
TGAAACTATCGTCATGGTAG+TGG - chr8_4:52617775-52617794 None:intergenic 40.0%
GAAGAGTGAAACTATCGTCA+TGG - chr8_4:52617781-52617800 None:intergenic 40.0%
AGAGAAGGAAAATGCATTGG+CGG - chr8_4:52617850-52617869 None:intergenic 40.0%
ACGAGAGAAGGAAAATGCAT+TGG - chr8_4:52617853-52617872 None:intergenic 40.0%
TTTGTTGCGAAAACGAGAGA+AGG - chr8_4:52617865-52617884 None:intergenic 40.0%
TATCGGAGGATTCATCGATA+GGG - chr8_4:52617908-52617927 None:intergenic 40.0%
TAAATAAGCTGCTATCCTGG+TGG + chr8_4:52618238-52618257 Msa1332690:intron 40.0%
GCAGAAAGTAGATGCTTTGA+TGG + chr8_4:52618468-52618487 Msa1332690:CDS 40.0%
GGGTAACAAGAAGTCTCTTA+AGG + chr8_4:52618552-52618571 Msa1332690:CDS 40.0%
GAAGTCTCTTAAGGTAGCTA+TGG + chr8_4:52618561-52618580 Msa1332690:CDS 40.0%
ATACATGGAAGTAGATGGAC+AGG + chr8_4:52618609-52618628 Msa1332690:CDS 40.0%
TTGTGCCAAGCAGTTACATT+AGG - chr8_4:52618655-52618674 None:intergenic 40.0%
ACAAAGCAAGTGAGAGCTTA+CGG - chr8_4:52618688-52618707 None:intergenic 40.0%
! ATGTCATTTGCCGTCAACAT+TGG + chr8_4:52618714-52618733 Msa1332690:intron 40.0%
!!! GGATTTTGAAGTGAAAGGGA+TGG + chr8_4:52618735-52618754 Msa1332690:intron 40.0%
!!! TTTTGAAGTGAAAGGGATGG+TGG + chr8_4:52618738-52618757 Msa1332690:intron 40.0%
! TTTGAAGTGAAAGGGATGGT+GGG + chr8_4:52618739-52618758 Msa1332690:intron 40.0%
ACAGTGACTTGAGTTTAAGG+GGG - chr8_4:52618952-52618971 None:intergenic 40.0%
CACAGTGACTTGAGTTTAAG+GGG - chr8_4:52618953-52618972 None:intergenic 40.0%
CCACAGTGACTTGAGTTTAA+GGG - chr8_4:52618954-52618973 None:intergenic 40.0%
TCCACAGTGACTTGAGTTTA+AGG - chr8_4:52618955-52618974 None:intergenic 40.0%
ATGCCTGATAGATACACTCA+TGG + chr8_4:52619100-52619119 Msa1332690:intron 40.0%
CTTCCATGAGTGTATCTATC+AGG - chr8_4:52619106-52619125 None:intergenic 40.0%
AAGCTTAGCATGAGAAGACT+AGG + chr8_4:52619165-52619184 Msa1332690:intron 40.0%
!! TTTTCAGGGAGGAGAGATTA+AGG + chr8_4:52619419-52619438 Msa1332690:intron 40.0%
CTAAAATTGGCCAAGGATAC+TGG + chr8_4:52619466-52619485 Msa1332690:CDS 40.0%
AACAGTAACACCAGTATCCT+TGG - chr8_4:52619479-52619498 None:intergenic 40.0%
! ATATTAGTGGATGGAGCTCA+TGG + chr8_4:52619627-52619646 Msa1332690:intron 40.0%
! ATCTCTTTTGCCAGATGCAT+TGG - chr8_4:52619703-52619722 None:intergenic 40.0%
TTCACTTGGCGTTCTTTCTT+AGG + chr8_4:52619739-52619758 Msa1332690:intron 40.0%
TTAGGTCAACTATGCTGCAT+TGG + chr8_4:52619757-52619776 Msa1332690:intron 40.0%
GGTTCGATCATATGGAATGA+AGG + chr8_4:52619805-52619824 Msa1332690:CDS 40.0%
CCACTAAAGGAAAAACTACC+TGG - chr8_4:52619927-52619946 None:intergenic 40.0%
! CCAGGTAGTTTTTCCTTTAG+TGG + chr8_4:52619924-52619943 Msa1332690:intron 40.0%
AAAATTGAGTCATCCTCAGC+AGG - chr8_4:52619977-52619996 None:intergenic 40.0%
TTGCGAATCTCTCTTGAAAC+TGG + chr8_4:52620060-52620079 Msa1332690:intron 40.0%
GTAAGCATACAGAAGACATG+GGG - chr8_4:52620227-52620246 None:intergenic 40.0%
!! TTACTTACTGTTCTGGAACC+TGG + chr8_4:52620243-52620262 Msa1332690:CDS 40.0%
TGCAACAGATATCCAATGCA+TGG - chr8_4:52620336-52620355 None:intergenic 40.0%
GATATCTGTTGCACACTCAA+AGG + chr8_4:52620343-52620362 Msa1332690:CDS 40.0%
ATGATTACATCCACGAACTC+AGG + chr8_4:52620369-52620388 Msa1332690:CDS 40.0%
ACTGCTAAATGAGAAAGGGT+GGG - chr8_4:52620474-52620493 None:intergenic 40.0%
TGTACATCAGGAAGCGATTT+CGG + chr8_4:52620818-52620837 Msa1332690:intron 40.0%
! CATCATTTTCCACAAGCTTC+AGG - chr8_4:52620851-52620870 None:intergenic 40.0%
AACATGCGATATAAGCCATC+AGG - chr8_4:52620903-52620922 None:intergenic 40.0%
AATGCTCCAAGAGATATGGT+CGG - chr8_4:52621013-52621032 None:intergenic 40.0%
TGTTTATGCAGCTATGATCG+AGG + chr8_4:52621040-52621059 Msa1332690:CDS 40.0%
CCTGTAGAACAGTTACAAGA+AGG - chr8_4:52621142-52621161 None:intergenic 40.0%
CCTTCTTGTAACTGTTCTAC+AGG + chr8_4:52621139-52621158 Msa1332690:intron 40.0%
!! CTATTTCTGATAACTGGGAG+TGG + chr8_4:52621192-52621211 Msa1332690:CDS 40.0%
ACCGAGCAAATAATCTTGCA+CGG + chr8_4:52621255-52621274 Msa1332690:CDS 40.0%
TCCGTGCAAGATTATTTGCT+CGG - chr8_4:52621259-52621278 None:intergenic 40.0%
TTTAATGGCCTCTTGATTGC+AGG + chr8_4:52621374-52621393 Msa1332690:intron 40.0%
ACTTACAACCTGCAATCAAG+AGG - chr8_4:52621385-52621404 None:intergenic 40.0%
TGATTGCAGGTTGTAAGTAC+CGG + chr8_4:52621387-52621406 Msa1332690:intron 40.0%
CATTATGCAACTGCTGTCAA+AGG - chr8_4:52621719-52621738 None:intergenic 40.0%
ATAAGTTGCAGGTAAGGTTC+AGG + chr8_4:52621809-52621828 Msa1332690:intron 40.0%
TAAGTTGCAGGTAAGGTTCA+GGG + chr8_4:52621810-52621829 Msa1332690:intron 40.0%
AACCTGCGCTAAGACAAATT+TGG - chr8_4:52621974-52621993 None:intergenic 40.0%
AATTTGTCTTAGCGCAGGTT+TGG + chr8_4:52621974-52621993 Msa1332690:intron 40.0%
TAAATGCATGACAAGTCTCC+TGG + chr8_4:52622218-52622237 Msa1332690:intron 40.0%
TCTATATAAGGCCGCTGTAT+GGG - chr8_4:52622271-52622290 None:intergenic 40.0%
TTCTATATAAGGCCGCTGTA+TGG - chr8_4:52622272-52622291 None:intergenic 40.0%
ATAGAAAGAGATTGGCGGTT+TGG + chr8_4:52622286-52622305 Msa1332690:CDS 40.0%
! ATTGGCTTAAGTAATCCTGG+AGG - chr8_4:52622330-52622349 None:intergenic 40.0%
TCAATGGCTAAGATCAAAGC+GGG - chr8_4:52622426-52622445 None:intergenic 40.0%
TACTAGAACGCTGAGTCATT+TGG - chr8_4:52622518-52622537 None:intergenic 40.0%
!! CGAGTTGATCATTCTTGTGA+GGG - chr8_4:52622548-52622567 None:intergenic 40.0%
!! TCGAGTTGATCATTCTTGTG+AGG - chr8_4:52622549-52622568 None:intergenic 40.0%
CACAAGAATGATCAACTCGA+TGG + chr8_4:52622549-52622568 Msa1332690:three_prime_UTR 40.0%
CGGGACTGCATTATATATCA+AGG + chr8_4:52622654-52622673 Msa1332690:three_prime_UTR 40.0%
ATCATCTCATCTCGGAACAG+TGG + chr8_4:52617646-52617665 Msa1332690:five_prime_UTR 45.0%
AGTGAGAGTGACTAAAGCTC+CGG - chr8_4:52617823-52617842 None:intergenic 45.0%
CATCGATAGGGGAAGTGAAA+CGG - chr8_4:52617896-52617915 None:intergenic 45.0%
ATCGGAGGATTCATCGATAG+GGG - chr8_4:52617907-52617926 None:intergenic 45.0%
GTATCGGAGGATTCATCGAT+AGG - chr8_4:52617909-52617928 None:intergenic 45.0%
! GTTGAAATCGGCGAGAGTAT+CGG - chr8_4:52617925-52617944 None:intergenic 45.0%
!! CTCGCCGATTTCAACATTAC+CGG + chr8_4:52617930-52617949 Msa1332690:CDS 45.0%
!! ATTTTGACAAGCTCACCACC+AGG - chr8_4:52618256-52618275 None:intergenic 45.0%
ATCTACTTTCTGCTCAGCAC+CGG - chr8_4:52618461-52618480 None:intergenic 45.0%
CCATATCATCTGCACAACGA+GGG + chr8_4:52618524-52618543 Msa1332690:CDS 45.0%
GTCTCTTAAGGTAGCTATGG+AGG + chr8_4:52618564-52618583 Msa1332690:CDS 45.0%
ATGGAAGTAGATGGACAGGA+AGG + chr8_4:52618613-52618632 Msa1332690:CDS 45.0%
CAGTGACTTGAGTTTAAGGG+GGG - chr8_4:52618951-52618970 None:intergenic 45.0%
CCCTTAAACTCAAGTCACTG+TGG + chr8_4:52618951-52618970 Msa1332690:intron 45.0%
TGAGGATGCCTATAGAGAGA+AGG + chr8_4:52619024-52619043 Msa1332690:intron 45.0%
TGCCTATAGAGAGAAGGCAA+TGG + chr8_4:52619030-52619049 Msa1332690:intron 45.0%
GTCCATTGCCTTCTCTCTAT+AGG - chr8_4:52619035-52619054 None:intergenic 45.0%
! GGGAGGAGAGATTAAGGTTT+TGG + chr8_4:52619425-52619444 Msa1332690:intron 45.0%
TGACCATTGACCAATGCATC+TGG + chr8_4:52619690-52619709 Msa1332690:intron 45.0%
! TTGCCAGATGCATTGGTCAA+TGG - chr8_4:52619696-52619715 None:intergenic 45.0%
CTTCCAACCTCCATAATCAC+CGG - chr8_4:52619870-52619889 None:intergenic 45.0%
TGATTATGGAGGTTGGAAGC+TGG + chr8_4:52619871-52619890 Msa1332690:CDS 45.0%
TTGGAAGCTGGAAAAGACAG+TGG + chr8_4:52619883-52619902 Msa1332690:CDS 45.0%
TGGACATCCTGATATGCTAG+AGG + chr8_4:52620271-52620290 Msa1332690:CDS 45.0%
GAAAACACCTGTAGGAAGTG+CGG - chr8_4:52620306-52620325 None:intergenic 45.0%
CACATATTCACCTGAGTTCG+TGG - chr8_4:52620382-52620401 None:intergenic 45.0%
CTCAGGTGAATATGTGTCAG+AGG + chr8_4:52620386-52620405 Msa1332690:intron 45.0%
CTAAATGAGAAAGGGTGGGA+AGG - chr8_4:52620470-52620489 None:intergenic 45.0%
GACTGCTAAATGAGAAAGGG+TGG - chr8_4:52620475-52620494 None:intergenic 45.0%
TTGAAGCTGACTGCACTACT+TGG + chr8_4:52620502-52620521 Msa1332690:intron 45.0%
! TGATATTGCTGCCGTTTCAC+TGG + chr8_4:52620645-52620664 Msa1332690:CDS 45.0%
GTACATCAGGAAGCGATTTC+GGG + chr8_4:52620819-52620838 Msa1332690:intron 45.0%
GATGGATATGGTCCCAAGTT+TGG + chr8_4:52621218-52621237 Msa1332690:CDS 45.0%
ACTGCGACAAGTCCAAACTT+GGG - chr8_4:52621233-52621252 None:intergenic 45.0%
AACTGCGACAAGTCCAAACT+TGG - chr8_4:52621234-52621253 None:intergenic 45.0%
! AAGACCATTTTATCGGGCTG+TGG + chr8_4:52621479-52621498 Msa1332690:CDS 45.0%
TTGTCCACAGCCCGATAAAA+TGG - chr8_4:52621486-52621505 None:intergenic 45.0%
TATCGGGCTGTGGACAAAAA+TGG + chr8_4:52621489-52621508 Msa1332690:CDS 45.0%
! AGAGAGTGCACAGCTAATAC+AGG + chr8_4:52621851-52621870 Msa1332690:intron 45.0%
CTGCGCTAAGACAAATTTGG+TGG - chr8_4:52621971-52621990 None:intergenic 45.0%
CACCAAATTTGTCTTAGCGC+AGG + chr8_4:52621969-52621988 Msa1332690:intron 45.0%
GACTTGATGAACCCATACAG+CGG + chr8_4:52622257-52622276 Msa1332690:CDS 45.0%
!! GCGGTTTGGTCATTATGAGA+TGG + chr8_4:52622300-52622319 Msa1332690:CDS 45.0%
TTATGAGATGGATGACCTCC+AGG + chr8_4:52622312-52622331 Msa1332690:CDS 45.0%
AGCGCTACAGAGATTCATTC+TGG + chr8_4:52622592-52622611 Msa1332690:three_prime_UTR 45.0%
TCTGAACAATGCAGCAAAGC+TGG - chr8_4:52622696-52622715 None:intergenic 45.0%
!! TATCAAAAAAAATTTAAATA+AGG - chr8_4:52619265-52619284 None:intergenic 5.0%
CTAACTGCCACTAAACTCGC+CGG + chr8_4:52617801-52617820 Msa1332690:CDS 50.0%
TAAAGCTCCGGCGAGTTTAG+TGG - chr8_4:52617811-52617830 None:intergenic 50.0%
!! AGGACAGGCTTGATGATGCT+TGG + chr8_4:52618407-52618426 Msa1332690:CDS 50.0%
!! GCTGAACAAGAGAGTGTTGC+CGG + chr8_4:52618439-52618458 Msa1332690:CDS 50.0%
GCCATATCATCTGCACAACG+AGG + chr8_4:52618523-52618542 Msa1332690:CDS 50.0%
CCCTCGTTGTGCAGATGATA+TGG - chr8_4:52618527-52618546 None:intergenic 50.0%
ATCTGCACAACGAGGGCTTA+AGG + chr8_4:52618531-52618550 Msa1332690:CDS 50.0%
TCTGCACAACGAGGGCTTAA+GGG + chr8_4:52618532-52618551 Msa1332690:CDS 50.0%
CAAGTGAGAGCTTACGGATG+TGG - chr8_4:52618682-52618701 None:intergenic 50.0%
ACACACACAGACACACACAG+AGG - chr8_4:52619351-52619370 None:intergenic 50.0%
!! AGGCTGTTTACTGGCTCATG+AGG - chr8_4:52619535-52619554 None:intergenic 50.0%
! CTGCATTGGAGCGCTATAAG+TGG + chr8_4:52619771-52619790 Msa1332690:CDS 50.0%
TTCATCACTCACTTCCACCC+TGG + chr8_4:52619843-52619862 Msa1332690:CDS 50.0%
TCATCACTCACTTCCACCCT+GGG + chr8_4:52619844-52619863 Msa1332690:CDS 50.0%
AGCATATCAGGATGTCCACC+AGG - chr8_4:52620269-52620288 None:intergenic 50.0%
GTAGCAGCCTCTAGCATATC+AGG - chr8_4:52620281-52620300 None:intergenic 50.0%
! TCCTACAGGTGTTTTCCAGC+AGG + chr8_4:52620310-52620329 Msa1332690:CDS 50.0%
! TTTTCCAGCAGGCCATGCAT+TGG + chr8_4:52620321-52620340 Msa1332690:CDS 50.0%
ATATCCAATGCATGGCCTGC+TGG - chr8_4:52620328-52620347 None:intergenic 50.0%
AATGAGAAAGGGTGGGAAGG+CGG - chr8_4:52620467-52620486 None:intergenic 50.0%
!! GTGTCGTTTATGCGACCCTA+TGG + chr8_4:52620616-52620635 Msa1332690:CDS 50.0%
AGGCGTTAACTATTACGGCC+AGG + chr8_4:52620726-52620745 Msa1332690:CDS 50.0%
GAGTACAGTGAATCTGGACG+TGG + chr8_4:52620870-52620889 Msa1332690:CDS 50.0%
GGACGTGGAGTATATCCTGA+TGG + chr8_4:52620885-52620904 Msa1332690:CDS 50.0%
CAGAAGAGGTAACCAAGCAC+AGG - chr8_4:52621170-52621189 None:intergenic 50.0%
CTGTGCTTGGTTACCTCTTC+TGG + chr8_4:52621168-52621187 Msa1332690:CDS 50.0%
AACAGATGGTAAGAAGGGCG+AGG - chr8_4:52621284-52621303 None:intergenic 50.0%
! GCGATGATCGTGATAACGCT+TGG + chr8_4:52621421-52621440 Msa1332690:CDS 50.0%
! AGGTTTGGTACTGCGTTACG+AGG + chr8_4:52621989-52622008 Msa1332690:intron 50.0%
! GGTTTGGTACTGCGTTACGA+GGG + chr8_4:52621990-52622009 Msa1332690:intron 50.0%
GCAGTGAACATGTTGTGCTG+TGG + chr8_4:52622012-52622031 Msa1332690:intron 50.0%
! ATGACAAGTCTCCTGGCTTG+TGG + chr8_4:52622225-52622244 Msa1332690:intron 50.0%
!! TCGTCATGGTAGTGGCGAGT+GGG - chr8_4:52617767-52617786 None:intergenic 55.0%
!! ATCGTCATGGTAGTGGCGAG+TGG - chr8_4:52617768-52617787 None:intergenic 55.0%
CGGCGAGTTTAGTGGCAGTT+AGG - chr8_4:52617803-52617822 None:intergenic 55.0%
!! GAAATCGGCGAGAGTATCGG+AGG - chr8_4:52617922-52617941 None:intergenic 55.0%
CTTTGGTCTAGCGACAGCAC+CGG + chr8_4:52618375-52618394 Msa1332690:CDS 55.0%
AGCCTGTCCTCAACATGTGC+CGG - chr8_4:52618397-52618416 None:intergenic 55.0%
TTGAGACCCACCATCAGCAG+TGG - chr8_4:52618500-52618519 None:intergenic 55.0%
GCTATGGAGGCCATGATCAG+AGG + chr8_4:52618577-52618596 Msa1332690:CDS 55.0%
ACAGACACACACAGAGGACG+CGG - chr8_4:52619345-52619364 None:intergenic 55.0%
!! TACTGTTCTGGAACCTGGCC+TGG + chr8_4:52620248-52620267 Msa1332690:CDS 55.0%
GCTACTTCCGCACTTCCTAC+AGG + chr8_4:52620296-52620315 Msa1332690:CDS 55.0%
GCCTGCTGGAAAACACCTGT+AGG - chr8_4:52620314-52620333 None:intergenic 55.0%
TCGTCGCGTGAGTACATGTC+TGG - chr8_4:52620790-52620809 None:intergenic 55.0%
GATCCGCCGACCATATCTCT+TGG + chr8_4:52621004-52621023 Msa1332690:CDS 55.0%
GCTCCAAGAGATATGGTCGG+CGG - chr8_4:52621010-52621029 None:intergenic 55.0%
!! GATAACTGGGAGTGGGCTGA+TGG + chr8_4:52621200-52621219 Msa1332690:CDS 55.0%
!! TGGGAGTGGGCTGATGGATA+TGG + chr8_4:52621206-52621225 Msa1332690:CDS 55.0%
!! GACAGCACCGGCACATGTTG+AGG + chr8_4:52618387-52618406 Msa1332690:CDS 60.0%
CACCGGCACATGTTGAGGAC+AGG + chr8_4:52618392-52618411 Msa1332690:CDS 60.0%
ATGGGCTCTGCCACTGCTGA+TGG + chr8_4:52618487-52618506 Msa1332690:CDS 60.0%
GCTCTGCCACTGCTGATGGT+GGG + chr8_4:52618491-52618510 Msa1332690:CDS 60.0%
CCTCCATAATCACCGGCCCA+GGG - chr8_4:52619863-52619882 None:intergenic 60.0%
ACCTCCATAATCACCGGCCC+AGG - chr8_4:52619864-52619883 None:intergenic 60.0%
GGGCCGGTGATTATGGAGGT+TGG + chr8_4:52619864-52619883 Msa1332690:CDS 60.0%
CCTCAGCAGGCAGAGTTCGA+TGG - chr8_4:52619964-52619983 None:intergenic 60.0%
CCATCGAACTCTGCCTGCTG+AGG + chr8_4:52619961-52619980 Msa1332690:intron 60.0%
!! TGTTCTGGAACCTGGCCTGG+TGG + chr8_4:52620251-52620270 Msa1332690:CDS 60.0%
ATCAGGATGTCCACCAGGCC+AGG - chr8_4:52620264-52620283 None:intergenic 60.0%
! CAGGAAGCGATTTCGGGTGC+TGG + chr8_4:52620825-52620844 Msa1332690:intron 60.0%
CTACAGGGTGTGCCTGTGCT+TGG + chr8_4:52621155-52621174 Msa1332690:intron 60.0%
! GTCTCCTGGCTTGTGGTGAC+AGG + chr8_4:52622232-52622251 Msa1332690:intron 60.0%
! TCCTGGCTTGTGGTGACAGG+TGG + chr8_4:52622235-52622254 Msa1332690:intron 60.0%
TCCACCTGTCACCACAAGCC+AGG - chr8_4:52622239-52622258 None:intergenic 60.0%
GGCTCTGCCACTGCTGATGG+TGG + chr8_4:52618490-52618509 Msa1332690:CDS 65.0%
CACTCACTTCCACCCTGGGC+CGG + chr8_4:52619848-52619867 Msa1332690:CDS 65.0%
CCATAATCACCGGCCCAGGG+TGG - chr8_4:52619860-52619879 None:intergenic 65.0%
CCACCCTGGGCCGGTGATTA+TGG + chr8_4:52619857-52619876 Msa1332690:CDS 65.0%
CCCTGGGCCGGTGATTATGG+AGG + chr8_4:52619860-52619879 Msa1332690:CDS 65.0%
!! GGGTGCTGGCCTGAAGCTTG+TGG + chr8_4:52620839-52620858 Msa1332690:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 52617492 52622932 52617492 ID=Msa1332690;Name=Msa1332690
chr8_4 mRNA 52617492 52622932 52617492 ID=Msa1332690-mRNA-1;Parent=Msa1332690;Name=Msa1332690-mRNA-1;_AED=0.17;_eAED=0.17;_QI=288|1|1|1|1|1|10|500|630
chr8_4 exon 52617492 52617951 52617492 ID=Msa1332690-mRNA-1:exon:15861;Parent=Msa1332690-mRNA-1
chr8_4 exon 52618356 52618686 52618356 ID=Msa1332690-mRNA-1:exon:15862;Parent=Msa1332690-mRNA-1
chr8_4 exon 52619426 52619564 52619426 ID=Msa1332690-mRNA-1:exon:15863;Parent=Msa1332690-mRNA-1
chr8_4 exon 52619761 52619927 52619761 ID=Msa1332690-mRNA-1:exon:15864;Parent=Msa1332690-mRNA-1
chr8_4 exon 52620169 52620390 52620169 ID=Msa1332690-mRNA-1:exon:15865;Parent=Msa1332690-mRNA-1
chr8_4 exon 52620579 52620747 52620579 ID=Msa1332690-mRNA-1:exon:15866;Parent=Msa1332690-mRNA-1
chr8_4 exon 52620828 52621061 52620828 ID=Msa1332690-mRNA-1:exon:15867;Parent=Msa1332690-mRNA-1
chr8_4 exon 52621161 52621310 52621161 ID=Msa1332690-mRNA-1:exon:15868;Parent=Msa1332690-mRNA-1
chr8_4 exon 52621396 52621525 52621396 ID=Msa1332690-mRNA-1:exon:15869;Parent=Msa1332690-mRNA-1
chr8_4 exon 52622254 52622932 52622254 ID=Msa1332690-mRNA-1:exon:15870;Parent=Msa1332690-mRNA-1
chr8_4 five_prime_UTR 52617492 52617779 52617492 ID=Msa1332690-mRNA-1:five_prime_utr;Parent=Msa1332690-mRNA-1
chr8_4 CDS 52617780 52617951 52617780 ID=Msa1332690-mRNA-1:cds;Parent=Msa1332690-mRNA-1
chr8_4 CDS 52618356 52618686 52618356 ID=Msa1332690-mRNA-1:cds;Parent=Msa1332690-mRNA-1
chr8_4 CDS 52619426 52619564 52619426 ID=Msa1332690-mRNA-1:cds;Parent=Msa1332690-mRNA-1
chr8_4 CDS 52619761 52619927 52619761 ID=Msa1332690-mRNA-1:cds;Parent=Msa1332690-mRNA-1
chr8_4 CDS 52620169 52620390 52620169 ID=Msa1332690-mRNA-1:cds;Parent=Msa1332690-mRNA-1
chr8_4 CDS 52620579 52620747 52620579 ID=Msa1332690-mRNA-1:cds;Parent=Msa1332690-mRNA-1
chr8_4 CDS 52620828 52621061 52620828 ID=Msa1332690-mRNA-1:cds;Parent=Msa1332690-mRNA-1
chr8_4 CDS 52621161 52621310 52621161 ID=Msa1332690-mRNA-1:cds;Parent=Msa1332690-mRNA-1
chr8_4 CDS 52621396 52621525 52621396 ID=Msa1332690-mRNA-1:cds;Parent=Msa1332690-mRNA-1
chr8_4 CDS 52622254 52622432 52622254 ID=Msa1332690-mRNA-1:cds;Parent=Msa1332690-mRNA-1
chr8_4 three_prime_UTR 52622433 52622932 52622433 ID=Msa1332690-mRNA-1:three_prime_utr;Parent=Msa1332690-mRNA-1
Gene Sequence

>Msa1332690

ATGACGATAGTTTCACTCTTCCTAACTGCCACTAAACTCGCCGGAGCTTTAGTCACTCTCACTGTCGCCGCCAATGCATTTTCCTTCTCTCGTTTTCGCAACAAAAATCTTCGCCGTTTCACTTCCCCTATCGATGAATCCTCCGATACTCTCGCCGATTTCAACATTACCGAAGAAGAAAATGGGTTTTTCTTTGGTCTAGCGACAGCACCGGCACATGTTGAGGACAGGCTTGATGATGCTTGGATTCAGTTTGCTGAACAAGAGAGTGTTGCCGGTGCTGAGCAGAAAGTAGATGCTTTGATGGGCTCTGCCACTGCTGATGGTGGGTCTCAACAAGCCATATCATCTGCACAACGAGGGCTTAAGGGTAACAAGAAGTCTCTTAAGGTAGCTATGGAGGCCATGATCAGAGGATTTGAGAAATACATGGAAGTAGATGGACAGGAAGGAGAAGAAGAACACATTCCTAATGTAACTGCTTGGCACAATGTTCCACATCCGGAGGAGAGATTAAGGTTTTGGTCTGATCCTGATACAGAACTAAAATTGGCCAAGGATACTGGTGTTACTGTTTTTCGTATGGGAATTGACTGGTCAAGAGTCATGCCTCATGAGCCAGTAAACAGCCTTAAAGAATCTGTCAACTATGCTGCATTGGAGCGCTATAAGTGGATTATCAATAGGGTTCGATCATATGGAATGAAGGTGATGCTCACTCTTTTTCATCACTCACTTCCACCCTGGGCCGGTGATTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGATTTTACCAGGCTTGTTGTTGACAGTGTATCAGATTTAGTAGACTATTGGGTAACATTTAACGAGCCCCATGTCTTCTGTATGCTTACTTACTGTTCTGGAACCTGGCCTGGTGGACATCCTGATATGCTAGAGGCTGCTACTTCCGCACTTCCTACAGGTGTTTTCCAGCAGGCCATGCATTGGATATCTGTTGCACACTCAAAGGCATATGATTACATCCACGAACTCAGTAACTCATCAAATCAAATAGTTGGTGTCGCACATCATGTGTCGTTTATGCGACCCTATGGTCTGTTTGATATTGCTGCCGTTTCACTGGCTAATTCATTGAGTCTCTTCCCATTCATCGATGAAATATCCAAAAAGATGGACTTTATAGGCGTTAACTATTACGGCCAGGAAGCGATTTCGGGTGCTGGCCTGAAGCTTGTGGAAAATGATGAGTACAGTGAATCTGGACGTGGAGTATATCCTGATGGCTTATATCGCATGTTACTTCAGTTCCATGAAAGATACAAGCATCTAAATGTCCCTTTCATTATTGCTGAAAATGGAATTGCAGATGAGACTGATTTGATCCGCCGACCATATCTCTTGGAGCATTTACTTGCTGTTTATGCAGCTATGATCGAGGGTGTGCCTGTGCTTGGTTACCTCTTCTGGACTATTTCTGATAACTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTGTCGCAGTTGACCGAGCAAATAATCTTGCACGGATTCCTCGCCCTTCTTACCATCTGTTTTCTAAAGTTGTAAGTACCGGTAAAGTTACATGCGATGATCGTGATAACGCTTGGAATGAACTTCAAAGAGCCGCTAAAGAGAAGAAGACAAGACCATTTTATCGGGCTGTGGACAAAAATGGTTTAATGTTAGCAGGTGGACTTGATGAACCCATACAGCGGCCTTATATAGAAAGAGATTGGCGGTTTGGTCATTATGAGATGGATGACCTCCAGGATTACTTAAGCCAATTCTCAAGATTCATTATTCAACGATTCTCCCTAAAAAGGAAAAAGAAATCTCAAAAGGAGCAATTAGTTCTGCACCCGCTTTGA

Protein sequence

>Msa1332690

MTIVSLFLTATKLAGALVTLTVAANAFSFSRFRNKNLRRFTSPIDESSDTLADFNITEEENGFFFGLATAPAHVEDRLDDAWIQFAEQESVAGAEQKVDALMGSATADGGSQQAISSAQRGLKGNKKSLKVAMEAMIRGFEKYMEVDGQEGEEEHIPNVTAWHNVPHPEERLRFWSDPDTELKLAKDTGVTVFRMGIDWSRVMPHEPVNSLKESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGDYGGWKLEKTVDYFMDFTRLVVDSVSDLVDYWVTFNEPHVFCMLTYCSGTWPGGHPDMLEAATSALPTGVFQQAMHWISVAHSKAYDYIHELSNSSNQIVGVAHHVSFMRPYGLFDIAAVSLANSLSLFPFIDEISKKMDFIGVNYYGQEAISGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYKHLNVPFIIAENGIADETDLIRRPYLLEHLLAVYAAMIEGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKVVSTGKVTCDDRDNAWNELQRAAKEKKTRPFYRAVDKNGLMLAGGLDEPIQRPYIERDWRFGHYEMDDLQDYLSQFSRFIIQRFSLKRKKKSQKEQLVLHPL*