AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1293870


Find 233 sgRNAs with CRISPR-Local

Find 813 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_3 gene 51413597 51426558 51413597 ID=Msa1293870;Name=Msa1293870
chr8_3 mRNA 51413597 51426558 51413597 ID=Msa1293870-mRNA-1;Parent=Msa1293870;Name=Msa1293870-mRNA-1;_AED=0.12;_eAED=0.12;_QI=214|0.96|0.96|1|0.96|0.96|28|302|1238
chr8_3 exon 51413597 51413924 51413597 ID=Msa1293870-mRNA-1:exon:14351;Parent=Msa1293870-mRNA-1
chr8_3 exon 51414020 51414109 51414020 ID=Msa1293870-mRNA-1:exon:14352;Parent=Msa1293870-mRNA-1
chr8_3 exon 51414228 51414329 51414228 ID=Msa1293870-mRNA-1:exon:14353;Parent=Msa1293870-mRNA-1
chr8_3 exon 51415455 51415631 51415455 ID=Msa1293870-mRNA-1:exon:14354;Parent=Msa1293870-mRNA-1
chr8_3 exon 51415731 51415861 51415731 ID=Msa1293870-mRNA-1:exon:14355;Parent=Msa1293870-mRNA-1
chr8_3 exon 51417131 51417224 51417131 ID=Msa1293870-mRNA-1:exon:14356;Parent=Msa1293870-mRNA-1
chr8_3 exon 51417278 51417435 51417278 ID=Msa1293870-mRNA-1:exon:14357;Parent=Msa1293870-mRNA-1
chr8_3 exon 51417598 51417673 51417598 ID=Msa1293870-mRNA-1:exon:14358;Parent=Msa1293870-mRNA-1
chr8_3 exon 51417789 51417917 51417789 ID=Msa1293870-mRNA-1:exon:14359;Parent=Msa1293870-mRNA-1
chr8_3 exon 51417994 51418138 51417994 ID=Msa1293870-mRNA-1:exon:14360;Parent=Msa1293870-mRNA-1
chr8_3 exon 51419081 51419211 51419081 ID=Msa1293870-mRNA-1:exon:14361;Parent=Msa1293870-mRNA-1
chr8_3 exon 51420033 51420185 51420033 ID=Msa1293870-mRNA-1:exon:14362;Parent=Msa1293870-mRNA-1
chr8_3 exon 51420264 51420453 51420264 ID=Msa1293870-mRNA-1:exon:14363;Parent=Msa1293870-mRNA-1
chr8_3 exon 51421726 51421859 51421726 ID=Msa1293870-mRNA-1:exon:14364;Parent=Msa1293870-mRNA-1
chr8_3 exon 51422238 51422396 51422238 ID=Msa1293870-mRNA-1:exon:14365;Parent=Msa1293870-mRNA-1
chr8_3 exon 51422673 51422981 51422673 ID=Msa1293870-mRNA-1:exon:14366;Parent=Msa1293870-mRNA-1
chr8_3 exon 51423064 51423240 51423064 ID=Msa1293870-mRNA-1:exon:14367;Parent=Msa1293870-mRNA-1
chr8_3 exon 51423398 51423481 51423398 ID=Msa1293870-mRNA-1:exon:14368;Parent=Msa1293870-mRNA-1
chr8_3 exon 51423556 51423765 51423556 ID=Msa1293870-mRNA-1:exon:14369;Parent=Msa1293870-mRNA-1
chr8_3 exon 51423932 51424021 51423932 ID=Msa1293870-mRNA-1:exon:14370;Parent=Msa1293870-mRNA-1
chr8_3 exon 51424091 51424212 51424091 ID=Msa1293870-mRNA-1:exon:14371;Parent=Msa1293870-mRNA-1
chr8_3 exon 51424287 51424442 51424287 ID=Msa1293870-mRNA-1:exon:14372;Parent=Msa1293870-mRNA-1
chr8_3 exon 51424524 51424631 51424524 ID=Msa1293870-mRNA-1:exon:14373;Parent=Msa1293870-mRNA-1
chr8_3 exon 51424715 51424775 51424715 ID=Msa1293870-mRNA-1:exon:14374;Parent=Msa1293870-mRNA-1
chr8_3 exon 51425532 51425666 51425532 ID=Msa1293870-mRNA-1:exon:14375;Parent=Msa1293870-mRNA-1
chr8_3 exon 51425790 51425877 51425790 ID=Msa1293870-mRNA-1:exon:14376;Parent=Msa1293870-mRNA-1
chr8_3 exon 51425967 51426039 51425967 ID=Msa1293870-mRNA-1:exon:14377;Parent=Msa1293870-mRNA-1
chr8_3 exon 51426136 51426558 51426136 ID=Msa1293870-mRNA-1:exon:14378;Parent=Msa1293870-mRNA-1
chr8_3 five_prime_UTR 51413597 51413810 51413597 ID=Msa1293870-mRNA-1:five_prime_utr;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51413811 51413924 51413811 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51414020 51414109 51414020 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51414228 51414329 51414228 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51415455 51415631 51415455 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51415731 51415861 51415731 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51417131 51417224 51417131 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51417278 51417435 51417278 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51417598 51417673 51417598 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51417789 51417917 51417789 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51417994 51418138 51417994 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51419081 51419211 51419081 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51420033 51420185 51420033 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51420264 51420453 51420264 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51421726 51421859 51421726 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51422238 51422396 51422238 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51422673 51422981 51422673 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51423064 51423240 51423064 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51423398 51423481 51423398 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51423556 51423765 51423556 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51423932 51424021 51423932 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51424091 51424212 51424091 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51424287 51424442 51424287 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51424524 51424631 51424524 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51424715 51424775 51424715 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51425532 51425666 51425532 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51425790 51425877 51425790 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51425967 51426039 51425967 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 CDS 51426136 51426256 51426136 ID=Msa1293870-mRNA-1:cds;Parent=Msa1293870-mRNA-1
chr8_3 three_prime_UTR 51426257 51426558 51426257 ID=Msa1293870-mRNA-1:three_prime_utr;Parent=Msa1293870-mRNA-1
Gene Sequence

>Msa1293870

ATGGAATCCCAACCCGAATCAGCTCGCGCACGGCCTAGGCTCTTCATCCAAGAAATGGTGATGCGGAATTTCAAATCTTACGCTGGCGAACAACGCGTTGGTCCCTTTCATAAGAGTTTTTCGGCTGTTGTTGGACCGAATGGAAGTGGAAAGAGTAATGTTATTGATGCTATGTTGTTTGTGTTTGGGAAACGAGCCAAGCAGATGCGATTGAATAAAGTTTCGGAGCTTATACATAATTCTAGCAATCATCAGAATTTGGATAGTGCTGGGGTTTCTGTTCATTTTCAGGAGATTGTTGATTTGGAAGATGGAACATATGAGACTGTTTCTGGAACTGACTTTGTGATTACAAGGGTTGCTTTTCGGGACAACTCCTCTAAGTATTACATTGATAACCGTTCAAGTAACTTCACTGAAGTTACCAAGAAATTGAAGGGGAAAGGTGTTGACCTTGACAATAATAGGTTTCTGATTCTTCAGGGCGAAGTTGAGCAGATTTCACTTATGAAACCAAAATCTCAAGGACCTCATGATGAAGGCTTTCTAGAATATTTGGAAGATATCATTGGGACCAACAAATATGTAGAAAAAATTGATGAGTCATATAAACAGTTAGAATCTCTAAATGAAAGAAGATCCGGTGTGGTGCAAATGGTCAAGCTATCTGAGAAAGAAAGAGACAGCTTGGAGGCATGTAAAATTGTGGATGTGAAGAATGAAGCAGAAGCATACATGCTCAAAGAGTTATCTTTGTTGAAATGGCAAGAGAAGGCTACAACGCTAGCTGTTGATGATACAGGTGGAAAAATGGATGAGTTACAAGTGGGTGTTGCTAGCCTGGAAGAAAATCTTAAGGCAGAAAGGGATAAGATCCAAGAAAATAAACAGATTCTGAAAGAGCTTGAAACTAAGCACAACAAGTATATTCAAATACAAGAGGAGCTAGATAATGATATGAGGAAGTGTAAAGAGGAATTCAAGGAGTTTGAGAGGCAGGATGTCAAGTTTCGAGAAGATTATAAGCACATGAATCAGAAGATCAAGAAGCTGGAGGATAAAGCCGAAAAGGATTCATCAAAAATCGAAGCTCTTGTGAAAGAGGGTGAAAACTCAAATGATATGATACCAAAACTTGAGGATAATATACCTAAACTGCAAAAGTTGTTGACCGATGAGGAGAAGGTCTTGGAAGAAATCACAGAGAGTTCTAAAGTTGAAACTGAGAAATTCCGCTCTGAGCTTGCTAAATTTCGTTCGGAGCTTGAACCTTGGGAAAAAGATTTGATCGAGCACAAGGGAAAGCTTGAGGTTGCATCTAGCGAGGCCAAGCTTCTAAATGAGAAGCATGAAGGTGCTCGTGAAGCCTTTGAAGGTGCTCAAAATCAGATGAAAATTATAACAGAAACAATTAAATCAAAAACTGCAAGCATTTCTCAAATTAAGAGTAATATAGAAAAGAGCAAGTGTGAAGCGTCAGAAGCTCACAGAGTGGAAGAAGAATGTATCAAAGAACAAGATGCCCTGATTCCTCTTGAACAAGGTGCTAGACAGAAGGTTGCTGAAATGAAGTCTGTTTTGGATTCAGAGAAGAGCCAGGGATCAGTTCTAAAAGCAGTCATGAAAGCTAAGGAAACCGGACAAATAGAAGGAATATATGGACGGATGGGTGACCTAGGTGCCATTGATGCAAAGTTTGATGTTGCAATATCAACAGCATGTTCTGGGCTTGACTATATTGTCGTGGAAACAACAAATGCAGCACAAGCCTGTGTTGAGTTGCTTCGTAGAGAGAATCTTGGCGTTGCTACTTTCATGATATTGGAGAAGCAAGTTGATCTTCTTCCAATGATGAAAAAGAGCGTAAGCACTCCAGAGGGGGTTCCCCGTCTTTTTGATTTAGTAAAGGTTCGAGATGAAAGAATGAAACTTGCTTTCTTTGCAGCACTTCGAAACACAGTTGTTGCTAAGGATCTTGACCAGGCTTCACGCATAGCATATGGTGGAAACAATGAGTTTCGGCGAGTTGTTACTCTTGATGGTGCACTTTTTGAAAAATCTGGAACAATGAGTGGTGGGGGAAGTAAGCCCAAAGGTGGGAAGATGGGCACATCGATTCGAGCTACAAATGTGTCTGGAGAAGCTGTTGCAAGTGCTGAGAGGGAATTGTCTGGATTGACCGATAAATTGAATAAAATTCGGCAAAGAATGATGGATGCTGTGAAAGAATACCAGGAAGCGGAAAAAAAAATTGCTGCTTGGGAAATGGAGCTGGCTAAAAGCCAGAAGGAGGTTGACAGTTTGAATTCACAATATAGTTATATTGAAAAACAACTTGGTTCCCTTGAAGTTGCATCAAATCCACAAGAGAACGAGCTTGATCGGTTGAAAGAGCTGAAGAAGATTATTTCTGCAGAAGAAAGAGAGATTAATAGACTTACTGACGGATCTAAAAAACTGAAGGAAAAGGTTTCGGAGCTTCAGAAGAAAATAGAGAATGCTGGAGGTGAAAAATTAAAATCTCAGAAGTTGAAGGTCCAGAAAATTCAGTCTGATATTGACAAGGCCAGCTCAGAGATCAATCGTCATAAGGTTCAAATAGAGACGGGCCAAAAGATGATGAAGAAGTTGACTAAGGGAATAGAGGAGTCAAAGAAGGAAAAAGAACGGTTAGCCGAGGAGAGGGAAAAGTTAAAAGGAAACTTCAAAGAAATAGAGCAGAAAGCATTTGCTGTTCAAAAGAATTATGAGAAAACAGAAGAGATGATTAAGAAACATCGGGATGTCTTAGAGGAAGCAAGATCTGAGCATGATAAGATGAAAAAAGCAGTGGACGAATTGCGTGCATCTGAGGTTGATGCTGATTTTAAATTAAAAGACATGAAGAAAGCATACAAAGAATTAGAAATAAAGGGGAAAGGTTACAGGAAAAGACTAGATGAGTTGCAAACTGCTATTTCCAAGCATCTTGAGCAAATTCAGGTAGATTTAGTGGATAATGAAAAGCTACATGCTACATTGACTGAAGAACATCTCAATGCTGCTTGTGACCTGAAAAAGGCCTGTGAAACGGTAGCATTGCTTGAAGCTCAACTGAAAGAGATGAATCCAAATCTTGATTCAATTGCAGAGTATCGCAAGAAGGTAGCATTGTACAATGAACGAGTTGAAGAACTTAATGCAGTCACTCAGGAGCGAGATGATATAAAGAAGCAACATGATGAATTGAGAAAGAGGAGACTGGATGAGTTTATGGAAGGTTTTAATGCCATATCATTAAAGTTAAAGGAAATGTATCAGATGATTACCCTTGGAGGTGATGCAGAACTCGAGCTTGTGGATTCTTTAGATCCTTTCTCTGAAGGCGTTGTATTTAGTGTTAGACCACCAAAGAAAAGCTGGAAAAATATTGCTAACTTATCGGGTGGTGAAAAGACTCTTAGCTCATTGGCTCTTGTATTTGCTCTTCATCATTACAAGCCTACGCCGCTTTATGTAATGGATGAAATTGACGCCGCTTTAGACTTCAAGAATGTATCTATCGTCGGGCATTATGTGAAAGATAGGACTAAGGATGCTCAATTCATAATCATTAGTCTAAGGAACAATATGTTTGAATTGGCTGATCGACTTGTTGGTATTTATAAAACTGATAATTGCACAAAGAGCATCACTATTGATCCGTGCAGTTTTGTCGTTTGCCAGAAGGGTGCATGA

Protein sequence

>Msa1293870

MESQPESARARPRLFIQEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSSNHQNLDSAGVSVHFQEIVDLEDGTYETVSGTDFVITRVAFRDNSSKYYIDNRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKSQGPHDEGFLEYLEDIIGTNKYVEKIDESYKQLESLNERRSGVVQMVKLSEKERDSLEACKIVDVKNEAEAYMLKELSLLKWQEKATTLAVDDTGGKMDELQVGVASLEENLKAERDKIQENKQILKELETKHNKYIQIQEELDNDMRKCKEEFKEFERQDVKFREDYKHMNQKIKKLEDKAEKDSSKIEALVKEGENSNDMIPKLEDNIPKLQKLLTDEEKVLEEITESSKVETEKFRSELAKFRSELEPWEKDLIEHKGKLEVASSEAKLLNEKHEGAREAFEGAQNQMKIITETIKSKTASISQIKSNIEKSKCEASEAHRVEEECIKEQDALIPLEQGARQKVAEMKSVLDSEKSQGSVLKAVMKAKETGQIEGIYGRMGDLGAIDAKFDVAISTACSGLDYIVVETTNAAQACVELLRRENLGVATFMILEKQVDLLPMMKKSVSTPEGVPRLFDLVKVRDERMKLAFFAALRNTVVAKDLDQASRIAYGGNNEFRRVVTLDGALFEKSGTMSGGGSKPKGGKMGTSIRATNVSGEAVASAERELSGLTDKLNKIRQRMMDAVKEYQEAEKKIAAWEMELAKSQKEVDSLNSQYSYIEKQLGSLEVASNPQENELDRLKELKKIISAEEREINRLTDGSKKLKEKVSELQKKIENAGGEKLKSQKLKVQKIQSDIDKASSEINRHKVQIETGQKMMKKLTKGIEESKKEKERLAEEREKLKGNFKEIEQKAFAVQKNYEKTEEMIKKHRDVLEEARSEHDKMKKAVDELRASEVDADFKLKDMKKAYKELEIKGKGYRKRLDELQTAISKHLEQIQVDLVDNEKLHATLTEEHLNAACDLKKACETVALLEAQLKEMNPNLDSIAEYRKKVALYNERVEELNAVTQERDDIKKQHDELRKRRLDEFMEGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITIDPCSFVVCQKGA*