AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0778590


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0778590 MtrunA17_Chr5g0434681 96.555 987 33 1 1 987 1 986 0.0 1936
Msa0778590 MtrunA17_Chr8g0376151 48.357 426 175 10 569 970 550 954 2.79e-87 301
Msa0778590 MtrunA17_Chr1g0184441 35.264 397 221 12 579 966 495 864 6.80e-40 159
Msa0778590 MtrunA17_Chr1g0184441 48.387 93 47 1 21 113 24 115 2.86e-22 103
Msa0778590 MtrunA17_Chr7g0274311 34.336 399 215 14 579 966 504 866 8.61e-35 143
Msa0778590 MtrunA17_Chr7g0274311 48.485 99 50 1 15 113 20 117 2.12e-25 113
Msa0778590 MtrunA17_Chr3g0093241 30.851 188 109 4 1 169 1 186 6.09e-26 113
Msa0778590 MtrunA17_Chr3g0093241 61.616 99 38 0 618 716 331 429 4.15e-23 104
Msa0778590 MtrunA17_Chr4g0059771 36.667 120 76 0 1 120 1 120 6.94e-25 110
Msa0778590 MtrunA17_Chr4g0059771 48.611 144 68 3 573 716 290 427 2.08e-16 83.6
Msa0778590 MtrunA17_Chr4g0003901 49.485 97 49 0 618 714 286 382 3.35e-16 82.8
Msa0778590 MtrunA17_Chr4g0003911 48.352 91 47 0 625 715 281 371 5.25e-16 82.8
Msa0778590 MtrunA17_Chr1g0176391 28.191 376 201 13 621 957 65 410 1.37e-14 77.8
Msa0778590 MtrunA17_Chr4g0049631 35.780 109 70 0 621 729 303 411 2.00e-14 77.0
Msa0778590 MtrunA17_Chr7g0268041 37.097 124 75 1 601 724 53 173 2.96e-14 76.6
Msa0778590 MtrunA17_Chr2g0307041 41.053 95 56 0 624 718 22 116 3.64e-14 75.5
Msa0778590 MtrunA17_Chr4g0073651 40.952 105 62 0 618 722 6 110 2.35e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0778590 AT5G16720.1 46.212 396 170 7 571 965 310 663 4.10e-87 294
Msa0778590 AT5G16720.1 38.686 274 122 10 1 257 1 245 2.87e-45 174
Msa0778590 AT1G70750.1 47.453 373 155 11 600 965 400 738 2.81e-72 255
Msa0778590 AT1G70750.1 53.509 114 44 2 1 107 1 112 4.03e-30 128
Msa0778590 AT1G08800.2 45.763 177 86 5 580 754 858 1026 5.13e-30 129
Msa0778590 AT1G08800.2 38.158 152 81 5 21 165 10 155 5.38e-23 106
Msa0778590 AT1G08800.4 45.763 177 86 5 580 754 858 1026 5.13e-30 129
Msa0778590 AT1G08800.4 38.158 152 81 5 21 165 10 155 5.38e-23 106
Msa0778590 AT1G08800.3 45.763 177 86 5 580 754 858 1026 5.13e-30 129
Msa0778590 AT1G08800.3 38.158 152 81 5 21 165 10 155 5.38e-23 106
Msa0778590 AT1G08800.1 45.763 177 86 5 580 754 858 1026 5.13e-30 129
Msa0778590 AT1G08800.1 38.158 152 81 5 21 165 10 155 5.38e-23 106
Msa0778590 AT2G30690.1 58.716 109 45 0 618 726 613 721 4.92e-27 119
Msa0778590 AT2G30690.2 58.716 109 45 0 618 726 613 721 4.92e-27 119
Msa0778590 AT1G74830.1 40.000 210 118 2 618 827 302 503 1.89e-26 115
Msa0778590 AT1G74830.1 36.283 113 72 0 1 113 20 132 7.73e-24 107
Msa0778590 AT1G18990.1 58.559 111 44 1 604 714 289 397 1.32e-21 100
Msa0778590 AT1G18990.1 31.720 186 97 3 1 156 1 186 6.77e-18 89.0
Msa0778590 AT4G13630.2 41.135 141 69 3 585 721 195 325 1.41e-17 88.2
Msa0778590 AT4G13630.1 41.135 141 69 3 585 721 195 325 1.41e-17 88.2
Msa0778590 AT5G06560.1 40.000 100 60 0 621 720 74 173 7.01e-16 82.4
Msa0778590 AT3G54740.3 39.604 101 61 0 624 724 77 177 2.44e-15 80.1
Msa0778590 AT3G54740.6 39.604 101 61 0 624 724 77 177 2.44e-15 80.1
Msa0778590 AT3G54740.2 39.604 101 61 0 624 724 77 177 2.44e-15 80.1
Msa0778590 AT3G54740.5 39.604 101 61 0 624 724 77 177 2.44e-15 80.1
Msa0778590 AT3G54740.8 39.604 101 61 0 624 724 29 129 2.94e-15 79.3
Msa0778590 AT3G54740.1 39.604 101 61 0 624 724 29 129 2.94e-15 79.3
Msa0778590 AT3G54740.7 39.604 101 61 0 624 724 29 129 2.94e-15 79.3
Msa0778590 AT3G54740.4 39.604 101 61 0 624 724 29 129 2.94e-15 79.3
Msa0778590 AT1G04890.1 42.969 128 70 2 590 715 82 208 3.86e-14 76.3
Msa0778590 AT4G13160.1 47.872 94 49 0 621 714 117 210 1.69e-13 72.8

Find 150 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATCTGTTGAAGCCTTCT+TGG 0.160198 5_2:+59126944 Msa0778590:CDS
TTGATAGTAATTACATTTAA+AGG 0.199625 5_2:+59131674 Msa0778590:three_prime_UTR
TTGATAGTAATTACATTTAA+AGG 0.199625 5_2:+59133759 Msa0778590:three_prime_UTR
GTGAAAATTGCTTGGCTTCT+AGG 0.206836 5_2:+59126770 Msa0778590:CDS
CTTGTTCTTCCATCATTCTT+TGG 0.217588 5_2:-59129134 None:intergenic
AAGCAACCAATTGTTCTTCT+TGG 0.220911 5_2:-59129666 None:intergenic
ACAAAATTTGCCAAATGTTT+TGG 0.233461 5_2:+59126583 Msa0778590:CDS
ACAGATAAGGAGGGTAAATT+TGG 0.246430 5_2:-59126930 None:intergenic
TGTTTACCTTGTGCATTATC+TGG 0.252484 5_2:-59127672 None:intergenic
TCTGCTGACCTAGGAGTTTC+AGG 0.253809 5_2:-59128823 None:intergenic
CTTACGTTCCTTGATAGTTT+TGG 0.261438 5_2:+59131514 Msa0778590:three_prime_UTR
TTCTCTGCTTCATCTAAATA+TGG 0.289720 5_2:-59129705 None:intergenic
CAATGTGAAACCTGCATAAT+AGG 0.290320 5_2:-59127267 None:intergenic
CATGAGAAACATGATGAAAA+TGG 0.306053 5_2:+59126862 Msa0778590:CDS
GATGGAGCTTGAAGAAAGTT+TGG 0.320863 5_2:+59127551 Msa0778590:CDS
AGAATTTCTCCAACATTGTA+TGG 0.334868 5_2:+59129899 Msa0778590:CDS
TTCAAAATTTCTGTCATTGT+CGG 0.350776 5_2:-59127960 None:intergenic
ATAGAATCTATTAACTTAAC+AGG 0.364312 5_2:-59127366 None:intergenic
AGAGGAAGTATTGATCAAAA+TGG 0.367658 5_2:+59127503 Msa0778590:CDS
TAGTGTATGCATTTCTTGAA+TGG 0.368218 5_2:+59126512 Msa0778590:CDS
AGAAGGAATTGGAAGAGTAT+AGG 0.372537 5_2:+59129232 Msa0778590:CDS
TGATGATACCGTTTCTAACT+TGG 0.372874 5_2:+59129425 Msa0778590:CDS
CTATCCATTTCACTTATCAT+AGG 0.373876 5_2:-59129807 None:intergenic
GAAGGAATTGGAAGAGTATA+GGG 0.377022 5_2:+59129233 Msa0778590:CDS
AGAGGAAAAGATAATTTCAT+TGG 0.377885 5_2:+59129551 Msa0778590:CDS
TGAATTACGCCTTAAGAACT+TGG 0.379118 5_2:+59130001 Msa0778590:CDS
GCAAGAACTTGAGAAGGAAT+TGG 0.385367 5_2:+59129221 Msa0778590:CDS
CACAAAGAAGACTATTCTAA+TGG 0.388166 5_2:+59129621 Msa0778590:CDS
AAAATGGAGAGAGTTTAAAT+AGG 0.391672 5_2:+59126878 Msa0778590:CDS
GTAGTTCAAATTTCTGTGAA+TGG 0.392563 5_2:+59127618 Msa0778590:CDS
CATGAAACTGAAAACTCATT+TGG 0.392989 5_2:+59126802 Msa0778590:CDS
AGATCAACTCAAAGCATTAG+AGG 0.392996 5_2:+59129533 Msa0778590:CDS
GATCATTGTCCAAGTTCTTA+AGG 0.394095 5_2:-59130010 None:intergenic
TTGTAATCATTGCCATTGTT+TGG 0.398108 5_2:-59129065 None:intergenic
AAACTTGAACTCTGATGAAA+AGG 0.403932 5_2:+59127173 Msa0778590:CDS
ACACTTGACTGCGGTTCAAC+TGG 0.406526 5_2:-59127474 None:intergenic
TGTATGGGATCCATACAAAA+TGG 0.406925 5_2:+59129915 Msa0778590:CDS
TTCTGATGCTCCTATTATGC+AGG 0.413743 5_2:+59127257 Msa0778590:CDS
CTCTTTGAGAAAACAGAATC+AGG 0.416556 5_2:+59128877 Msa0778590:CDS
AGTTCCTATGATAAGTGAAA+TGG 0.425926 5_2:+59129803 Msa0778590:CDS
TCTATATCTTTAGAAGTTGA+AGG 0.427647 5_2:+59127579 Msa0778590:CDS
AAGAAGAACAATTGGTTGCT+TGG 0.429766 5_2:+59129668 Msa0778590:CDS
ATTTGCATTTGATAGAGAAT+TGG 0.437319 5_2:+59129746 Msa0778590:CDS
GTTAGAAACGGTATCATCAT+TGG 0.443026 5_2:-59129421 None:intergenic
TGCACACAAGAAGATGAATC+TGG 0.444733 5_2:+59127851 Msa0778590:CDS
TAGTACTTTAGAAGAATTTG+AGG 0.444834 5_2:+59129491 Msa0778590:CDS
CAGTGTAAATGATAATGAAA+TGG 0.445770 5_2:+59128705 Msa0778590:CDS
AGCCGGTCGATTGTTAAAAC+CGG 0.449648 5_2:-59128952 None:intergenic
TTGAAGCCTTCTTGGTATGA+TGG 0.459164 5_2:+59126952 Msa0778590:CDS
TGGTTTAAGACCAAAACATT+TGG 0.460628 5_2:-59126593 None:intergenic
TTCACCAAGCAAAGACTTGT+AGG 0.462618 5_2:+59130055 Msa0778590:CDS
TGAGGATCTAGAGGAGGGGA+AGG 0.463551 5_2:+59127422 Msa0778590:CDS
TGACATGCATTGACTTGAGT+TGG 0.463755 5_2:-59128449 None:intergenic
CAATCTCCAAGAAGAACAAT+TGG 0.464940 5_2:+59129660 Msa0778590:CDS
AGCAAAGACTTGTAGGCATA+AGG 0.466944 5_2:+59130062 Msa0778590:exon
AAGATAATTTCATTGGAAGA+TGG 0.470072 5_2:+59129558 Msa0778590:CDS
TGAATCATGCAAATTGAATG+AGG 0.474317 5_2:+59127404 Msa0778590:CDS
GATGAGAGTTCATCAAGATA+TGG 0.474936 5_2:+59129594 Msa0778590:CDS
GAGTTGGTTGGTTCTTCAGA+TGG 0.476219 5_2:-59128433 None:intergenic
AGCACTGAGAGCTCTTTGTT+CGG 0.478445 5_2:-59128992 None:intergenic
TATGCCTACAAGTCTTTGCT+TGG 0.481502 5_2:-59130059 None:intergenic
AACTGAACTCGATCGATCCT+CGG 0.488164 5_2:-59127148 None:intergenic
CAAGAAGGCTTCAACAGATA+AGG 0.490047 5_2:-59126943 None:intergenic
ACTCATTTGGTATGAGACAT+AGG 0.495233 5_2:+59126815 Msa0778590:CDS
TACAAGGCTGCAGGAAGAAA+AGG 0.495890 5_2:+59129083 Msa0778590:CDS
TGAATGCAACTTAACTATAG+TGG 0.498253 5_2:-59130036 None:intergenic
ATGTTGAGAAGAATGAAAGA+TGG 0.509499 5_2:+59129294 Msa0778590:CDS
ATAAACTTCCTGAAACTCCT+AGG 0.514133 5_2:+59128815 Msa0778590:CDS
TCTTGTTCTTGTTGCAACAC+CGG 0.514596 5_2:+59129339 Msa0778590:CDS
GGCAATGATTACAAGGCTGC+AGG 0.518083 5_2:+59129074 Msa0778590:CDS
AGGTTGATCGCGTTTATGAC+AGG 0.518142 5_2:+59129853 Msa0778590:CDS
TGATACCGTTTCTAACTTGG+AGG 0.518834 5_2:+59129428 Msa0778590:CDS
ATACAAAATGGTGGTGATGA+AGG 0.519176 5_2:+59129927 Msa0778590:CDS
TAAAACCGTTACTTTACCAT+GGG 0.525914 5_2:-59131633 None:intergenic
TAAAACCGTTACTTTACCAT+GGG 0.525914 5_2:-59133718 None:intergenic
TGCATTATCTGGTTCTTCTG+TGG 0.527662 5_2:-59127661 None:intergenic
TGACAGTTCATCGGTGTAGC+CGG 0.531224 5_2:-59129358 None:intergenic
CTAAAACCGTTACTTTACCA+TGG 0.532980 5_2:-59131634 None:intergenic
CTAAAACCGTTACTTTACCA+TGG 0.532980 5_2:-59133719 None:intergenic
AGAAAAGGCGGCAATGCAGA+TGG 0.535335 5_2:+59129098 Msa0778590:CDS
CATTTCATTATCATTTACAC+TGG 0.540128 5_2:-59128704 None:intergenic
CCATCAATCATCAAAATGCT+CGG 0.540613 5_2:+59128771 Msa0778590:CDS
CTATATCTTTAGAAGTTGAA+GGG 0.544204 5_2:+59127580 Msa0778590:CDS
GTATGGATCCCATACAATGT+TGG 0.545411 5_2:-59129908 None:intergenic
ATGCATTGACTTGAGTTGGT+TGG 0.546919 5_2:-59128445 None:intergenic
AGCCCACTCCAAAACTATCA+AGG 0.549519 5_2:-59131522 None:intergenic
TGCAGAGAAAACAAACATGA+TGG 0.549690 5_2:+59127533 Msa0778590:CDS
AGAGAAGCAAGAACTTGAGA+AGG 0.550787 5_2:+59129215 Msa0778590:CDS
GAAAGTGTGTATTGAAGAAG+AGG 0.550976 5_2:+59129833 Msa0778590:CDS
TCAATAGAAGATGACAAAGA+AGG 0.551727 5_2:+59127009 Msa0778590:CDS
AAATGGTGGTGATGAAGGAA+AGG 0.555471 5_2:+59129932 Msa0778590:CDS
TTGGTTGGTTCTTCAGATGG+AGG 0.560112 5_2:-59128430 None:intergenic
GGATGGTAGCGTTGCAAGTG+AGG 0.560662 5_2:+59128915 Msa0778590:CDS
ATTGAATTTGAGATAAACAA+TGG 0.561453 5_2:+59127042 Msa0778590:CDS
TGAATGAGGATCTAGAGGAG+GGG 0.561509 5_2:+59127418 Msa0778590:CDS
ATTACAATACCAAAGAATGA+TGG 0.564697 5_2:+59129125 Msa0778590:CDS
AGATCATGATCATGATGAAG+AGG 0.566217 5_2:+59127068 Msa0778590:CDS
GAATTTCTCCAACATTGTAT+GGG 0.568122 5_2:+59129900 Msa0778590:CDS
TTTGGTATGAGACATAGGAT+TGG 0.570047 5_2:+59126820 Msa0778590:CDS
TGAGGTAGAATACAGCGATC+CGG 0.570543 5_2:+59128933 Msa0778590:CDS
TATCTCCTCCAAGTTAGAAA+CGG 0.572085 5_2:-59129433 None:intergenic
TATCCTCAGAGAGGTGGCCG+AGG 0.572603 5_2:+59127131 Msa0778590:CDS
TAGTTTCCATCATACCAAGA+AGG 0.574251 5_2:-59126958 None:intergenic
TTGAATGAGGATCTAGAGGA+GGG 0.574686 5_2:+59127417 Msa0778590:CDS
TGCAACTTAACTATAGTGGA+TGG 0.575938 5_2:-59130032 None:intergenic
ATAAAATCATCAACAGCACT+TGG 0.577726 5_2:-59127225 None:intergenic
TAGCATGTGTGAAAATTGCT+TGG 0.580838 5_2:+59126762 Msa0778590:CDS
CAAATTGAATGAGGATCTAG+AGG 0.582974 5_2:+59127413 Msa0778590:CDS
GCAGTCAAGTGTCTTAGAAG+AGG 0.583268 5_2:+59127485 Msa0778590:CDS
GCAGCTGAGATTTCAAACCT+TGG 0.585082 5_2:+59126703 Msa0778590:CDS
GAAGGCTTCAACAGATAAGG+AGG 0.588495 5_2:-59126940 None:intergenic
ATCAAGGAACGTAAGTTGCA+TGG 0.588658 5_2:-59131506 None:intergenic
AAACAATGGCAATGATTACA+AGG 0.589570 5_2:+59129067 Msa0778590:CDS
ACTTGCAACGCTACCATCCA+CGG 0.593320 5_2:-59128911 None:intergenic
TTCAAACTCTTAGCACTCAA+AGG 0.593842 5_2:+59131593 Msa0778590:three_prime_UTR
TTCAAACTCTTAGCACTCAA+AGG 0.593842 5_2:+59133678 Msa0778590:three_prime_UTR
TTGGTTAGTAGCTATTGCTG+AGG 0.595521 5_2:-59129046 None:intergenic
GATGATTTGAGCAGTAGCCA+AGG 0.600442 5_2:-59126720 None:intergenic
ATCTTCTTCAAGTGATAGTG+AGG 0.602149 5_2:+59128480 Msa0778590:CDS
AAGATCAACTGACAGTTCAT+CGG 0.602771 5_2:-59129367 None:intergenic
AAGCTTGTGACGATGATGAT+CGG 0.602945 5_2:+59127337 Msa0778590:CDS
GTTGGTGTTTCTATGCAACA+TGG 0.621325 5_2:-59126473 None:intergenic
TGCATTGCATCTGCTGACCT+AGG 0.622751 5_2:-59128832 None:intergenic
ATAGTAATTACATTTAAAGG+AGG 0.627026 5_2:+59131677 Msa0778590:three_prime_UTR
ATAGTAATTACATTTAAAGG+AGG 0.627026 5_2:+59133762 Msa0778590:three_prime_UTR
TGTTTCTCATGACTTAACCA+TGG 0.628154 5_2:-59126850 None:intergenic
GGAGCAGAAGAATCCGTGGA+TGG 0.629443 5_2:+59128898 Msa0778590:CDS
TGTATCCCATGGTAAAGTAA+CGG 0.632044 5_2:+59131628 Msa0778590:three_prime_UTR
TGTATCCCATGGTAAAGTAA+CGG 0.632044 5_2:+59133713 Msa0778590:three_prime_UTR
ATGCAATGCACTACATGCAG+AGG 0.632820 5_2:+59128845 Msa0778590:CDS
ATCAGGAGCAGAAGAATCCG+TGG 0.633581 5_2:+59128894 Msa0778590:CDS
CATGGGATACATCTGACCGT+TGG 0.640318 5_2:-59131616 None:intergenic
CATGGGATACATCTGACCGT+TGG 0.640318 5_2:-59133701 None:intergenic
ATTGAATGAGGATCTAGAGG+AGG 0.640762 5_2:+59127416 Msa0778590:CDS
AATAGCTACTAACCAAACAA+TGG 0.642191 5_2:+59129053 Msa0778590:CDS
AGATTCACTAGCTCATCAAG+TGG 0.654889 5_2:+59131547 Msa0778590:three_prime_UTR
AGATTCACTAGCTCATCAAG+TGG 0.654889 5_2:+59133632 Msa0778590:three_prime_UTR
TGGATCAAGTGATGATGATG+AGG 0.658998 5_2:+59127871 Msa0778590:CDS
CAACGGTCAGATGTATCCCA+TGG 0.659514 5_2:+59131617 Msa0778590:three_prime_UTR
CAACGGTCAGATGTATCCCA+TGG 0.659514 5_2:+59133702 Msa0778590:three_prime_UTR
AAGGCTTCAACAGATAAGGA+GGG 0.667591 5_2:-59126939 None:intergenic
GATCCTCGGCCACCTCTCTG+AGG 0.673263 5_2:-59127134 None:intergenic
AAGGCTGCAGGAAGAAAAGG+CGG 0.674245 5_2:+59129086 Msa0778590:CDS
AGCCTTGAACAGAAAAGACA+AGG 0.674692 5_2:-59126616 None:intergenic
TCTTAGCACTCAAAGGCCAA+CGG 0.674974 5_2:+59131600 Msa0778590:three_prime_UTR
TCTTAGCACTCAAAGGCCAA+CGG 0.674974 5_2:+59133685 Msa0778590:three_prime_UTR
TCTTCTAAGACACTTGACTG+CGG 0.687745 5_2:-59127483 None:intergenic
GAAGAACCAGATAATGCACA+AGG 0.705101 5_2:+59127666 Msa0778590:CDS
CTTGAACAGAAAAGACAAGG+TGG 0.722462 5_2:-59126613 None:intergenic
ATGGGATCCATACAAAATGG+TGG 0.735054 5_2:+59129918 Msa0778590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTAATAAATAAAAATA+TGG - chr5_2:59130454-59130473 None:intergenic 0.0%
!!! TATTTTTATTTATTAAATAA+AGG + chr5_2:59130454-59130473 Msa0778590:intron 0.0%
!!! ATTTTTATTTATTAAATAAA+GGG + chr5_2:59130455-59130474 Msa0778590:intron 0.0%
!! ATATTTATATATCAATGATT+AGG + chr5_2:59130997-59131016 Msa0778590:intron 10.0%
!!! TTTTTATTTATTATTACAAC+AGG - chr5_2:59131100-59131119 None:intergenic 10.0%
!! AACAAAAAATTAAAAGAAAA+TGG + chr5_2:59131221-59131240 Msa0778590:intron 10.0%
!!! AGTTACTATTTTAATTTATT+AGG + chr5_2:59131927-59131946 Msa0778590:intron 10.0%
!!! GTTACTATTTTAATTTATTA+GGG + chr5_2:59131928-59131947 Msa0778590:intron 10.0%
!! AAAAAAATATCCAAAAAAAA+AGG + chr5_2:59132350-59132369 Msa0778590:intron 10.0%
!! AAAAAATATCCAAAAAAAAA+GGG + chr5_2:59132351-59132370 Msa0778590:intron 10.0%
!! AATTAATGAACTAGTATAAT+AGG - chr5_2:59128058-59128077 None:intergenic 15.0%
!! TTTCATTTCAACAAATATAA+AGG + chr5_2:59130484-59130503 Msa0778590:intron 15.0%
!! GCTAAGATTAAAAAAAAAAA+AGG - chr5_2:59130526-59130545 None:intergenic 15.0%
!! AATGAAAATGAAATATTTCA+TGG + chr5_2:59131248-59131267 Msa0778590:intron 15.0%
!!! TTGATAGTAATTACATTTAA+AGG + chr5_2:59131674-59131693 Msa0778590:three_prime_UTR 15.0%
!!! TTTATTAGGATTTTATTTTC+AGG + chr5_2:59131862-59131881 Msa0778590:intron 15.0%
!!! TAGTAACTAGTTTTATTTTT+GGG - chr5_2:59131915-59131934 None:intergenic 15.0%
!!! ATAGTAACTAGTTTTATTTT+TGG - chr5_2:59131916-59131935 None:intergenic 15.0%
!!! ATTTTCTTAAATGTATTTCA+TGG + chr5_2:59132442-59132461 Msa0778590:intron 15.0%
!! AAAATAAAGAGAAAAATGTT+GGG + chr5_2:59133095-59133114 Msa0778590:intron 15.0%
!!! TTGATAGTAATTACATTTAA+AGG + chr5_2:59131674-59131693 Msa0778590:three_prime_UTR 15.0%
!!! TAGAATTACAACTATTTTGT+TGG - chr5_2:59126494-59126513 None:intergenic 20.0%
!!! ATTGAATTTGAGATAAACAA+TGG + chr5_2:59127042-59127061 Msa0778590:CDS 20.0%
!! ATAGAATCTATTAACTTAAC+AGG - chr5_2:59127369-59127388 None:intergenic 20.0%
!! TTATGAAATTAGCAAATTCT+TGG + chr5_2:59127777-59127796 Msa0778590:intron 20.0%
!! AGTTTAGATAGATTGAAAAA+AGG - chr5_2:59128650-59128669 None:intergenic 20.0%
!!! TCATTTTTTGCAACAAAATT+TGG - chr5_2:59130690-59130709 None:intergenic 20.0%
!! TTTATATATCAATGATTAGG+TGG + chr5_2:59131000-59131019 Msa0778590:intron 20.0%
!! TTCAATATTTCATCTTTGTT+TGG + chr5_2:59131456-59131475 Msa0778590:intron 20.0%
!!! AAGGTTGATATTTCAATAAT+AGG + chr5_2:59131482-59131501 Msa0778590:intron 20.0%
!! ATAGTAATTACATTTAAAGG+AGG + chr5_2:59131677-59131696 Msa0778590:three_prime_UTR 20.0%
!!! AACAGTTTTAGAATTTGTTT+GGG + chr5_2:59131708-59131727 Msa0778590:three_prime_UTR 20.0%
!! AAGCAATAAAATTGTTCTTT+GGG - chr5_2:59131784-59131803 None:intergenic 20.0%
!! AAAGCAATAAAATTGTTCTT+TGG - chr5_2:59131785-59131804 None:intergenic 20.0%
!! TGATTGTCTTATATGAAATT+AGG + chr5_2:59131828-59131847 Msa0778590:intron 20.0%
!! TCTTATATGAAATTAGGAAA+TGG + chr5_2:59131834-59131853 Msa0778590:intron 20.0%
!!! TTTTTTTCACCCTTTTTTTT+TGG - chr5_2:59132363-59132382 None:intergenic 20.0%
!!! GAAAATAATTTTCTTTTGCT+TGG - chr5_2:59132471-59132490 None:intergenic 20.0%
!! TGTTCATTGATAGAAAATAT+TGG + chr5_2:59132528-59132547 Msa0778590:intron 20.0%
!! TAGAAAATATTGGATCAATA+TGG + chr5_2:59132538-59132557 Msa0778590:intron 20.0%
!! TCAAGACTATAAAGAATATA+TGG - chr5_2:59132617-59132636 None:intergenic 20.0%
!!! ATATATTCTTTATAGTCTTG+AGG + chr5_2:59132616-59132635 Msa0778590:intron 20.0%
!!! AAGTAAAAAATCTCTTGTTT+TGG - chr5_2:59132747-59132766 None:intergenic 20.0%
!!! AAAACAAGAGATTTTTTACT+TGG + chr5_2:59132746-59132765 Msa0778590:intron 20.0%
!!! AAACAAGAGATTTTTTACTT+GGG + chr5_2:59132747-59132766 Msa0778590:intron 20.0%
!! AAATGAAAATGTGTAAGTAT+TGG - chr5_2:59132816-59132835 None:intergenic 20.0%
!!! GTTATGATCAAATTTTGAAA+AGG + chr5_2:59132873-59132892 Msa0778590:intron 20.0%
!! GAAAATAAAGAGAAAAATGT+TGG + chr5_2:59133094-59133113 Msa0778590:intron 20.0%
!!! ATTTTTCTTCTTGTGATTTT+GGG - chr5_2:59133309-59133328 None:intergenic 20.0%
!!! AATTTTTCTTCTTGTGATTT+TGG - chr5_2:59133310-59133329 None:intergenic 20.0%
!! TTCAATATTTCATCTTTGTT+TGG + chr5_2:59131456-59131475 Msa0778590:intron 20.0%
!!! AAGGTTGATATTTCAATAAT+AGG + chr5_2:59131482-59131501 Msa0778590:intron 20.0%
!! ATAGTAATTACATTTAAAGG+AGG + chr5_2:59131677-59131696 Msa0778590:three_prime_UTR 20.0%
!!! AACAGTTTTAGAATTTGTTT+GGG + chr5_2:59131708-59131727 Msa0778590:three_prime_UTR 20.0%
!! TTCTTTGGTATTATGGTTTT+AGG - chr5_2:59126395-59126414 None:intergenic 25.0%
!!! GGTTTTTTTCTTTGGTATTA+TGG - chr5_2:59126402-59126421 None:intergenic 25.0%
! GGAAAAATTGGATAAAACAA+TGG + chr5_2:59126432-59126451 Msa0778590:exon 25.0%
!! ACAAAATTTGCCAAATGTTT+TGG + chr5_2:59126583-59126602 Msa0778590:CDS 25.0%
!! TTTTCAGTTTCATGATGATT+TGG - chr5_2:59126796-59126815 None:intergenic 25.0%
! AAAATGGAGAGAGTTTAAAT+AGG + chr5_2:59126878-59126897 Msa0778590:CDS 25.0%
!! TCTATATCTTTAGAAGTTGA+AGG + chr5_2:59127579-59127598 Msa0778590:CDS 25.0%
!! CTATATCTTTAGAAGTTGAA+GGG + chr5_2:59127580-59127599 Msa0778590:CDS 25.0%
! TATCTAACATCATCATTCAA+CGG - chr5_2:59127749-59127768 None:intergenic 25.0%
!! GAATGATGATGTTAGATATA+TGG + chr5_2:59127751-59127770 Msa0778590:intron 25.0%
!!! CTGAGAAATGAATTTTTCAA+AGG - chr5_2:59127912-59127931 None:intergenic 25.0%
! TTCAAAATTTCTGTCATTGT+CGG - chr5_2:59127963-59127982 None:intergenic 25.0%
! CTTAATTTATCACACATGTT+TGG + chr5_2:59128103-59128122 Msa0778590:intron 25.0%
! AATAAACTGAAAACAGTCTA+TGG - chr5_2:59128201-59128220 None:intergenic 25.0%
!!! GTTGTTTTCATAAACTATTC+TGG - chr5_2:59128236-59128255 None:intergenic 25.0%
! CATGAATTATTAATACCGTT+TGG - chr5_2:59128380-59128399 None:intergenic 25.0%
! GTACTAGATATAAAAACTCA+CGG - chr5_2:59128558-59128577 None:intergenic 25.0%
!!! ATCATTTACACTGGTTTTAT+CGG - chr5_2:59128698-59128717 None:intergenic 25.0%
! CATTTCATTATCATTTACAC+TGG - chr5_2:59128707-59128726 None:intergenic 25.0%
!! CAGTGTAAATGATAATGAAA+TGG + chr5_2:59128705-59128724 Msa0778590:CDS 25.0%
! AATATCAGCTGAAAAAATTG+AGG + chr5_2:59128738-59128757 Msa0778590:CDS 25.0%
! ATTACAATACCAAAGAATGA+TGG + chr5_2:59129125-59129144 Msa0778590:CDS 25.0%
!! TAGTACTTTAGAAGAATTTG+AGG + chr5_2:59129491-59129510 Msa0778590:CDS 25.0%
! AGAGGAAAAGATAATTTCAT+TGG + chr5_2:59129551-59129570 Msa0778590:CDS 25.0%
! AAGATAATTTCATTGGAAGA+TGG + chr5_2:59129558-59129577 Msa0778590:CDS 25.0%
! ATTTGCATTTGATAGAGAAT+TGG + chr5_2:59129746-59129765 Msa0778590:CDS 25.0%
! TTCATTTAAACAAACCCAAA+TGG - chr5_2:59130223-59130242 None:intergenic 25.0%
! GATTTAACAACTCTATTTAG+AGG - chr5_2:59130256-59130275 None:intergenic 25.0%
! AATTACATGCTTGAAACAAT+TGG - chr5_2:59130331-59130350 None:intergenic 25.0%
! TTGTTTCAAGCATGTAATTA+AGG + chr5_2:59130332-59130351 Msa0778590:intron 25.0%
! TCTATCATTTAATCAAGGAT+AGG + chr5_2:59130408-59130427 Msa0778590:intron 25.0%
!! ATCTTAGCATTACTGATTAA+TGG + chr5_2:59130538-59130557 Msa0778590:intron 25.0%
! GTATGTTCATATCTAATCTA+AGG + chr5_2:59130799-59130818 Msa0778590:intron 25.0%
! TAATATACGAGTATGTAGTT+AGG - chr5_2:59130978-59130997 None:intergenic 25.0%
! AGAATGCAAAGTCATTTATT+TGG - chr5_2:59131145-59131164 None:intergenic 25.0%
!! TTTCATCTTTGTTTGGAATA+AGG + chr5_2:59131463-59131482 Msa0778590:intron 25.0%
!!! CAACAGTTTTAGAATTTGTT+TGG + chr5_2:59131707-59131726 Msa0778590:three_prime_UTR 25.0%
! AGCAATAAAATTGTTCTTTG+GGG - chr5_2:59131783-59131802 None:intergenic 25.0%
!! ATTTGTTACAAGTATCTCAA+TGG - chr5_2:59131955-59131974 None:intergenic 25.0%
! TTATCAATCTTTCTTGGATT+AGG + chr5_2:59132142-59132161 Msa0778590:intron 25.0%
! TCAAAAATGAAGAAATGGAA+TGG - chr5_2:59132189-59132208 None:intergenic 25.0%
! AAGACTCAAAAATGAAGAAA+TGG - chr5_2:59132194-59132213 None:intergenic 25.0%
!!! AACAACTATGAATATTTTGG+TGG - chr5_2:59132219-59132238 None:intergenic 25.0%
!! GGAAACAACTATGAATATTT+TGG - chr5_2:59132222-59132241 None:intergenic 25.0%
!! TCATATTCTCCAATTTTGAA+TGG - chr5_2:59132695-59132714 None:intergenic 25.0%
!!! AAAAAATCTCTTGTTTTGGA+AGG - chr5_2:59132743-59132762 None:intergenic 25.0%
! AGAGATGTTGAAAAAATAGA+AGG + chr5_2:59133007-59133026 Msa0778590:intron 25.0%
! AAAGGTAAAAGAAGAGAAAA+AGG + chr5_2:59133060-59133079 Msa0778590:intron 25.0%
! TTTCATGAGTTAAAGAAGTA+AGG - chr5_2:59133213-59133232 None:intergenic 25.0%
! AAAAAACTTCTTCATTTGCT+TGG - chr5_2:59133240-59133259 None:intergenic 25.0%
! TAGAAAACAATCATGTTCTT+TGG + chr5_2:59133269-59133288 Msa0778590:intron 25.0%
!! TTTCATCTTTGTTTGGAATA+AGG + chr5_2:59131463-59131482 Msa0778590:intron 25.0%
!!! CAACAGTTTTAGAATTTGTT+TGG + chr5_2:59131707-59131726 Msa0778590:three_prime_UTR 25.0%
!!! ACTATGCTGGTTTTTTTCTT+TGG - chr5_2:59126410-59126429 None:intergenic 30.0%
AGAAAAAAACCAGCATAGTT+TGG + chr5_2:59126411-59126430 Msa0778590:five_prime_UTR 30.0%
TAGTGTATGCATTTCTTGAA+TGG + chr5_2:59126512-59126531 Msa0778590:CDS 30.0%
! TGGTTTAAGACCAAAACATT+TGG - chr5_2:59126596-59126615 None:intergenic 30.0%
CATGAAACTGAAAACTCATT+TGG + chr5_2:59126802-59126821 Msa0778590:CDS 30.0%
!!! ATAGGATTGGTTTTATTCCA+TGG + chr5_2:59126833-59126852 Msa0778590:CDS 30.0%
CATGAGAAACATGATGAAAA+TGG + chr5_2:59126862-59126881 Msa0778590:CDS 30.0%
TCAATAGAAGATGACAAAGA+AGG + chr5_2:59127009-59127028 Msa0778590:CDS 30.0%
AAACTTGAACTCTGATGAAA+AGG + chr5_2:59127173-59127192 Msa0778590:CDS 30.0%
ATAAAATCATCAACAGCACT+TGG - chr5_2:59127228-59127247 None:intergenic 30.0%
TGAATCATGCAAATTGAATG+AGG + chr5_2:59127404-59127423 Msa0778590:CDS 30.0%
! GAGAAGATTCAAACTTTTGT+CGG + chr5_2:59127444-59127463 Msa0778590:CDS 30.0%
!! AGAGGAAGTATTGATCAAAA+TGG + chr5_2:59127503-59127522 Msa0778590:CDS 30.0%
GTAGTTCAAATTTCTGTGAA+TGG + chr5_2:59127618-59127637 Msa0778590:CDS 30.0%
! TGCTTGATGTATAGAGTTTT+TGG + chr5_2:59127700-59127719 Msa0778590:intron 30.0%
! TGATGATGTTAGATATATGG+TGG + chr5_2:59127754-59127773 Msa0778590:intron 30.0%
!!! CAGAAATTTTGAAGCAGATA+TGG + chr5_2:59127970-59127989 Msa0778590:CDS 30.0%
TTTATCACACATGTTTGGAT+CGG + chr5_2:59128108-59128127 Msa0778590:intron 30.0%
CATTCAGATGTTTATCCAAA+CGG + chr5_2:59128362-59128381 Msa0778590:intron 30.0%
! TTCAGCTGATATTGTTTTCT+CGG - chr5_2:59128731-59128750 None:intergenic 30.0%
AATAGCTACTAACCAAACAA+TGG + chr5_2:59129053-59129072 Msa0778590:CDS 30.0%
TTGTAATCATTGCCATTGTT+TGG - chr5_2:59129068-59129087 None:intergenic 30.0%
AAACAATGGCAATGATTACA+AGG + chr5_2:59129067-59129086 Msa0778590:CDS 30.0%
AGAGTATAGGGAAAAAGTTA+TGG + chr5_2:59129245-59129264 Msa0778590:CDS 30.0%
ATGTTGAGAAGAATGAAAGA+TGG + chr5_2:59129294-59129313 Msa0778590:CDS 30.0%
CACAAAGAAGACTATTCTAA+TGG + chr5_2:59129621-59129640 Msa0778590:CDS 30.0%
TTCTCTGCTTCATCTAAATA+TGG - chr5_2:59129708-59129727 None:intergenic 30.0%
AGTTCCTATGATAAGTGAAA+TGG + chr5_2:59129803-59129822 Msa0778590:CDS 30.0%
CTATCCATTTCACTTATCAT+AGG - chr5_2:59129810-59129829 None:intergenic 30.0%
AGAATTTCTCCAACATTGTA+TGG + chr5_2:59129899-59129918 Msa0778590:CDS 30.0%
GAATTTCTCCAACATTGTAT+GGG + chr5_2:59129900-59129919 Msa0778590:CDS 30.0%
TGAATGCAACTTAACTATAG+TGG - chr5_2:59130039-59130058 None:intergenic 30.0%
TGTCATTCATGCATACTTTA+GGG - chr5_2:59130162-59130181 None:intergenic 30.0%
ATTTAAACAAACCCAAATGG+AGG - chr5_2:59130220-59130239 None:intergenic 30.0%
CCTAGTACAACTTAATGTAT+GGG + chr5_2:59130357-59130376 Msa0778590:intron 30.0%
AATGATAGAGCTGTCAATTT+AGG - chr5_2:59130397-59130416 None:intergenic 30.0%
ACAGCTCTATCATTTAATCA+AGG + chr5_2:59130403-59130422 Msa0778590:intron 30.0%
AGCAAACTGCATATAATGAA+AGG - chr5_2:59130579-59130598 None:intergenic 30.0%
! TTATATGCAGTTTGCTTTGT+TGG + chr5_2:59130583-59130602 Msa0778590:intron 30.0%
ATGAAAATACACATGCATGT+AGG + chr5_2:59130617-59130636 Msa0778590:intron 30.0%
TGAGAAAAATACTTCTCCAA+TGG + chr5_2:59130707-59130726 Msa0778590:intron 30.0%
AAAAATACTTCTCCAATGGA+GGG + chr5_2:59130711-59130730 Msa0778590:intron 30.0%
!! CATGTCATGGTTTGTTAAAT+TGG + chr5_2:59130752-59130771 Msa0778590:intron 30.0%
CTATCTACAAAAATTGTGTG+AGG + chr5_2:59130834-59130853 Msa0778590:intron 30.0%
AGAACATCATTTGGTCTAAT+TGG + chr5_2:59130882-59130901 Msa0778590:intron 30.0%
GAACATCATTTGGTCTAATT+GGG + chr5_2:59130883-59130902 Msa0778590:intron 30.0%
GTTCAATGTTACAAAATGCT+CGG + chr5_2:59131270-59131289 Msa0778590:intron 30.0%
TCATTAGTTCATTAAGCATG+TGG + chr5_2:59131322-59131341 Msa0778590:intron 30.0%
! TAAAACCGTTACTTTACCAT+GGG - chr5_2:59131636-59131655 None:intergenic 30.0%
ATATGAAATTAGGAAATGGC+TGG + chr5_2:59131838-59131857 Msa0778590:intron 30.0%
! ATATTCATAGTTGTTTCCGA+CGG + chr5_2:59132224-59132243 Msa0778590:intron 30.0%
AATTGGAGAATATGAAGATG+AGG + chr5_2:59132700-59132719 Msa0778590:intron 30.0%
ATTCTTGCACATGATAAGTT+TGG + chr5_2:59132851-59132870 Msa0778590:intron 30.0%
TGAAAAAATAGAAGGTCTCA+TGG + chr5_2:59133015-59133034 Msa0778590:intron 30.0%
CATGGTAAAAGAAAGTAATG+AGG + chr5_2:59133033-59133052 Msa0778590:intron 30.0%
AGAAAGTAATGAGGATGAAA+AGG + chr5_2:59133042-59133061 Msa0778590:intron 30.0%
AGAGAAAAAGGTTAATGAGA+AGG + chr5_2:59133072-59133091 Msa0778590:intron 30.0%
! AGAAAAATGTTGGGAAGTTT+TGG + chr5_2:59133104-59133123 Msa0778590:intron 30.0%
TGGTATGTGTAGTTAAATGT+TGG + chr5_2:59133158-59133177 Msa0778590:intron 30.0%
GGTATGTGTAGTTAAATGTT+GGG + chr5_2:59133159-59133178 Msa0778590:intron 30.0%
TGAGTTAAAGAAGTAAGGTT+AGG - chr5_2:59133208-59133227 None:intergenic 30.0%
! AACTCACTTCAATTTTATGC+AGG + chr5_2:59133337-59133356 Msa0778590:intron 30.0%
! ACTTCAATTTTATGCAGGTT+TGG + chr5_2:59133342-59133361 Msa0778590:intron 30.0%
TCATTAGTTCATTAAGCATG+TGG + chr5_2:59131322-59131341 Msa0778590:intron 30.0%
!! TCATGCATAAAAAGTATCCA+TGG - chr5_2:59131392-59131411 None:intergenic 30.0%
! TAAAACCGTTACTTTACCAT+GGG - chr5_2:59131636-59131655 None:intergenic 30.0%
! CCAATTTTTCCAAACTATGC+TGG - chr5_2:59126423-59126442 None:intergenic 35.0%
CCAGCATAGTTTGGAAAAAT+TGG + chr5_2:59126420-59126439 Msa0778590:five_prime_UTR 35.0%
TAGCATGTGTGAAAATTGCT+TGG + chr5_2:59126762-59126781 Msa0778590:CDS 35.0%
ACTCATTTGGTATGAGACAT+AGG + chr5_2:59126815-59126834 Msa0778590:CDS 35.0%
TTTGGTATGAGACATAGGAT+TGG + chr5_2:59126820-59126839 Msa0778590:CDS 35.0%
TGTTTCTCATGACTTAACCA+TGG - chr5_2:59126853-59126872 None:intergenic 35.0%
ACAGATAAGGAGGGTAAATT+TGG - chr5_2:59126933-59126952 None:intergenic 35.0%
TAGTTTCCATCATACCAAGA+AGG - chr5_2:59126961-59126980 None:intergenic 35.0%
AGATCATGATCATGATGAAG+AGG + chr5_2:59127068-59127087 Msa0778590:CDS 35.0%
!! TGAAAGTTTTATCCTCAGAG+AGG + chr5_2:59127122-59127141 Msa0778590:CDS 35.0%
CAATGTGAAACCTGCATAAT+AGG - chr5_2:59127270-59127289 None:intergenic 35.0%
CAAATTGAATGAGGATCTAG+AGG + chr5_2:59127413-59127432 Msa0778590:CDS 35.0%
TGCAGAGAAAACAAACATGA+TGG + chr5_2:59127533-59127552 Msa0778590:CDS 35.0%
TGTTTACCTTGTGCATTATC+TGG - chr5_2:59127675-59127694 None:intergenic 35.0%
CGTTTGGATAAACATCTGAA+TGG - chr5_2:59128364-59128383 None:intergenic 35.0%
! ATCTTCTTCAAGTGATAGTG+AGG + chr5_2:59128480-59128499 Msa0778590:CDS 35.0%
AGAATTGAGTGCTTCACAAT+TGG - chr5_2:59128608-59128627 None:intergenic 35.0%
ATCAGCTGAAAAAATTGAGG+AGG + chr5_2:59128741-59128760 Msa0778590:CDS 35.0%
CCATCAATCATCAAAATGCT+CGG + chr5_2:59128771-59128790 Msa0778590:CDS 35.0%
ATAAACTTCCTGAAACTCCT+AGG + chr5_2:59128815-59128834 Msa0778590:CDS 35.0%
! CTCTTTGAGAAAACAGAATC+AGG + chr5_2:59128877-59128896 Msa0778590:CDS 35.0%
CTTGTTCTTCCATCATTCTT+TGG - chr5_2:59129137-59129156 None:intergenic 35.0%
! AGAAGGAATTGGAAGAGTAT+AGG + chr5_2:59129232-59129251 Msa0778590:CDS 35.0%
! GAAGGAATTGGAAGAGTATA+GGG + chr5_2:59129233-59129252 Msa0778590:CDS 35.0%
AAGATCAACTGACAGTTCAT+CGG - chr5_2:59129370-59129389 None:intergenic 35.0%
GTTAGAAACGGTATCATCAT+TGG - chr5_2:59129424-59129443 None:intergenic 35.0%
TGATGATACCGTTTCTAACT+TGG + chr5_2:59129425-59129444 Msa0778590:CDS 35.0%
TATCTCCTCCAAGTTAGAAA+CGG - chr5_2:59129436-59129455 None:intergenic 35.0%
! AGATCAACTCAAAGCATTAG+AGG + chr5_2:59129533-59129552 Msa0778590:CDS 35.0%
GATGAGAGTTCATCAAGATA+TGG + chr5_2:59129594-59129613 Msa0778590:CDS 35.0%
CAATCTCCAAGAAGAACAAT+TGG + chr5_2:59129660-59129679 Msa0778590:CDS 35.0%
AAGCAACCAATTGTTCTTCT+TGG - chr5_2:59129669-59129688 None:intergenic 35.0%
AAGAAGAACAATTGGTTGCT+TGG + chr5_2:59129668-59129687 Msa0778590:CDS 35.0%
! GAAAGTGTGTATTGAAGAAG+AGG + chr5_2:59129833-59129852 Msa0778590:CDS 35.0%
TGTATGGGATCCATACAAAA+TGG + chr5_2:59129915-59129934 Msa0778590:CDS 35.0%
! TTCATCACCACCATTTTGTA+TGG - chr5_2:59129928-59129947 None:intergenic 35.0%
! ATACAAAATGGTGGTGATGA+AGG + chr5_2:59129927-59129946 Msa0778590:CDS 35.0%
TGAATTACGCCTTAAGAACT+TGG + chr5_2:59130001-59130020 Msa0778590:CDS 35.0%
GATCATTGTCCAAGTTCTTA+AGG - chr5_2:59130013-59130032 None:intergenic 35.0%
! TGCAACTTAACTATAGTGGA+TGG - chr5_2:59130035-59130054 None:intergenic 35.0%
GTCATTCATGCATACTTTAG+GGG - chr5_2:59130161-59130180 None:intergenic 35.0%
! GTGTCATTCATGCATACTTT+AGG - chr5_2:59130163-59130182 None:intergenic 35.0%
ATTTATCACTCTCCTCCATT+TGG + chr5_2:59130205-59130224 Msa0778590:intron 35.0%
TTTATCACTCTCCTCCATTT+GGG + chr5_2:59130206-59130225 Msa0778590:intron 35.0%
AGTTGTTAAATCAGTCTGCT+CGG + chr5_2:59130264-59130283 Msa0778590:intron 35.0%
GCCTAGTACAACTTAATGTA+TGG + chr5_2:59130356-59130375 Msa0778590:intron 35.0%
! CCCATACATTAAGTTGTACT+AGG - chr5_2:59130360-59130379 None:intergenic 35.0%
ACTTAATGTATGGGTCCTTA+TGG + chr5_2:59130366-59130385 Msa0778590:intron 35.0%
! TCAATTTAGGATCGACCATA+AGG - chr5_2:59130384-59130403 None:intergenic 35.0%
GAAAAATACTTCTCCAATGG+AGG + chr5_2:59130710-59130729 Msa0778590:intron 35.0%
! TCTAATCTAAGGTGTGAGTT+TGG + chr5_2:59130810-59130829 Msa0778590:intron 35.0%
! CTAATCTAAGGTGTGAGTTT+GGG + chr5_2:59130811-59130830 Msa0778590:intron 35.0%
ACATGAGAGAGAACATCATT+TGG + chr5_2:59130873-59130892 Msa0778590:intron 35.0%
AAAGCAAAGTTTCCCATCAT+GGG - chr5_2:59131054-59131073 None:intergenic 35.0%
AAAAGCAAAGTTTCCCATCA+TGG - chr5_2:59131055-59131074 None:intergenic 35.0%
TTGTTTCAACAGTGTGCAAT+TGG - chr5_2:59131206-59131225 None:intergenic 35.0%
TAGTTCATTAAGCATGTGGA+AGG + chr5_2:59131326-59131345 Msa0778590:intron 35.0%
!! CTTACGTTCCTTGATAGTTT+TGG + chr5_2:59131514-59131533 Msa0778590:three_prime_UTR 35.0%
!!! TTCCTTGATAGTTTTGGAGT+GGG + chr5_2:59131520-59131539 Msa0778590:three_prime_UTR 35.0%
TTCAAACTCTTAGCACTCAA+AGG + chr5_2:59131593-59131612 Msa0778590:three_prime_UTR 35.0%
TGTATCCCATGGTAAAGTAA+CGG + chr5_2:59131628-59131647 Msa0778590:three_prime_UTR 35.0%
! CTAAAACCGTTACTTTACCA+TGG - chr5_2:59131637-59131656 None:intergenic 35.0%
!!! ACGGTTTTAGAATTGAAGAG+AGG + chr5_2:59131647-59131666 Msa0778590:three_prime_UTR 35.0%
!!! TTGGGCTAGCTTTTATCAAT+TGG + chr5_2:59131726-59131745 Msa0778590:intron 35.0%
!!! AGGAAATGGCTGGTTTTATT+AGG + chr5_2:59131848-59131867 Msa0778590:intron 35.0%
! TGTGAAGCTTTGCTTCTTTT+TGG + chr5_2:59132048-59132067 Msa0778590:intron 35.0%
ACCATGACTTGATCTTATCA+AGG + chr5_2:59132082-59132101 Msa0778590:intron 35.0%
TCCTTGATAAGATCAAGTCA+TGG - chr5_2:59132086-59132105 None:intergenic 35.0%
!! TCAAGGAATCACTTTTCTTG+TGG + chr5_2:59132099-59132118 Msa0778590:intron 35.0%
TCCAAGAAAGATTGATAAGC+CGG - chr5_2:59132140-59132159 None:intergenic 35.0%
! TCATTTGGTAATCAGAGCTT+AGG + chr5_2:59132261-59132280 Msa0778590:intron 35.0%
GGATCCAGAATTTAAAGACA+TGG + chr5_2:59132637-59132656 Msa0778590:intron 35.0%
TCAGCCATGTCTTTAAATTC+TGG - chr5_2:59132644-59132663 None:intergenic 35.0%
! TAAAGACATGGCTGATGTTT+TGG + chr5_2:59132649-59132668 Msa0778590:intron 35.0%
! AGATGAGGTATTATGTGATG+TGG + chr5_2:59132715-59132734 Msa0778590:intron 35.0%
!!! ATTTTTTACTTGGGCTTCCA+TGG + chr5_2:59132756-59132775 Msa0778590:intron 35.0%
!! GAAGGTACTAGTGTAATAGT+AGG - chr5_2:59133130-59133149 None:intergenic 35.0%
TTTATGCAGGTTTGGATTTG+AGG + chr5_2:59133350-59133369 Msa0778590:intron 35.0%
TAGTTCATTAAGCATGTGGA+AGG + chr5_2:59131326-59131345 Msa0778590:intron 35.0%
!! CTTACGTTCCTTGATAGTTT+TGG + chr5_2:59131514-59131533 Msa0778590:three_prime_UTR 35.0%
!!! TTCCTTGATAGTTTTGGAGT+GGG + chr5_2:59131520-59131539 Msa0778590:three_prime_UTR 35.0%
TTCAAACTCTTAGCACTCAA+AGG + chr5_2:59131593-59131612 Msa0778590:three_prime_UTR 35.0%
TGTATCCCATGGTAAAGTAA+CGG + chr5_2:59131628-59131647 Msa0778590:three_prime_UTR 35.0%
! CTAAAACCGTTACTTTACCA+TGG - chr5_2:59131637-59131656 None:intergenic 35.0%
!!! ACGGTTTTAGAATTGAAGAG+AGG + chr5_2:59131647-59131666 Msa0778590:three_prime_UTR 35.0%
!!! TTGGGCTAGCTTTTATCAAT+TGG + chr5_2:59131726-59131745 Msa0778590:intron 35.0%
! GTTGGTGTTTCTATGCAACA+TGG - chr5_2:59126476-59126495 None:intergenic 40.0%
CTTGAACAGAAAAGACAAGG+TGG - chr5_2:59126616-59126635 None:intergenic 40.0%
! CACCTTGTCTTTTCTGTTCA+AGG + chr5_2:59126614-59126633 Msa0778590:CDS 40.0%
AGCCTTGAACAGAAAAGACA+AGG - chr5_2:59126619-59126638 None:intergenic 40.0%
GTGAAAATTGCTTGGCTTCT+AGG + chr5_2:59126770-59126789 Msa0778590:CDS 40.0%
AAGGCTTCAACAGATAAGGA+GGG - chr5_2:59126942-59126961 None:intergenic 40.0%
CAAGAAGGCTTCAACAGATA+AGG - chr5_2:59126946-59126965 None:intergenic 40.0%
CTTATCTGTTGAAGCCTTCT+TGG + chr5_2:59126944-59126963 Msa0778590:CDS 40.0%
TTGAAGCCTTCTTGGTATGA+TGG + chr5_2:59126952-59126971 Msa0778590:CDS 40.0%
!! AAGTTTTATCCTCAGAGAGG+TGG + chr5_2:59127125-59127144 Msa0778590:CDS 40.0%
GGATGCAGAAAAAGATGAGA+AGG + chr5_2:59127194-59127213 Msa0778590:CDS 40.0%
TTCTGATGCTCCTATTATGC+AGG + chr5_2:59127257-59127276 Msa0778590:CDS 40.0%
AAGCTTGTGACGATGATGAT+CGG + chr5_2:59127337-59127356 Msa0778590:CDS 40.0%
ATTGAATGAGGATCTAGAGG+AGG + chr5_2:59127416-59127435 Msa0778590:CDS 40.0%
TTGAATGAGGATCTAGAGGA+GGG + chr5_2:59127417-59127436 Msa0778590:CDS 40.0%
!! TCTTCTAAGACACTTGACTG+CGG - chr5_2:59127486-59127505 None:intergenic 40.0%
GATGGAGCTTGAAGAAAGTT+TGG + chr5_2:59127551-59127570 Msa0778590:CDS 40.0%
!! TGCATTATCTGGTTCTTCTG+TGG - chr5_2:59127664-59127683 None:intergenic 40.0%
GAAGAACCAGATAATGCACA+AGG + chr5_2:59127666-59127685 Msa0778590:CDS 40.0%
TGCACACAAGAAGATGAATC+TGG + chr5_2:59127851-59127870 Msa0778590:CDS 40.0%
! TGGATCAAGTGATGATGATG+AGG + chr5_2:59127871-59127890 Msa0778590:CDS 40.0%
GAACAAGAAAAAGCTTCACC+AGG + chr5_2:59127995-59128014 Msa0778590:CDS 40.0%
!! ATGCATTGACTTGAGTTGGT+TGG - chr5_2:59128448-59128467 None:intergenic 40.0%
!! TGACATGCATTGACTTGAGT+TGG - chr5_2:59128452-59128471 None:intergenic 40.0%
GAGTGCTTCACAATTGGATA+TGG - chr5_2:59128602-59128621 None:intergenic 40.0%
!! CCGAGCATTTTGATGATTGA+TGG - chr5_2:59128774-59128793 None:intergenic 40.0%
!! ATCCGGTTTTAACAATCGAC+CGG + chr5_2:59128950-59128969 Msa0778590:CDS 40.0%
!! CTTTTAGGGATGCTTTTAGC+CGG - chr5_2:59128972-59128991 None:intergenic 40.0%
! AGCTCTTTGTTCGGCTTTTA+GGG - chr5_2:59128986-59129005 None:intergenic 40.0%
TTGGTTAGTAGCTATTGCTG+AGG - chr5_2:59129049-59129068 None:intergenic 40.0%
AGAGAAGCAAGAACTTGAGA+AGG + chr5_2:59129215-59129234 Msa0778590:CDS 40.0%
GCAAGAACTTGAGAAGGAAT+TGG + chr5_2:59129221-59129240 Msa0778590:CDS 40.0%
TCTTGTTCTTGTTGCAACAC+CGG + chr5_2:59129339-59129358 Msa0778590:CDS 40.0%
TGATACCGTTTCTAACTTGG+AGG + chr5_2:59129428-59129447 Msa0778590:CDS 40.0%
GTATGGATCCCATACAATGT+TGG - chr5_2:59129911-59129930 None:intergenic 40.0%
ATGGGATCCATACAAAATGG+TGG + chr5_2:59129918-59129937 Msa0778590:CDS 40.0%
! AAATGGTGGTGATGAAGGAA+AGG + chr5_2:59129932-59129951 Msa0778590:CDS 40.0%
TTCACCAAGCAAAGACTTGT+AGG + chr5_2:59130055-59130074 Msa0778590:CDS 40.0%
TATGCCTACAAGTCTTTGCT+TGG - chr5_2:59130062-59130081 None:intergenic 40.0%
AGCAAAGACTTGTAGGCATA+AGG + chr5_2:59130062-59130081 Msa0778590:exon 40.0%
!! GGATTTATGGTGTCATGTCA+TGG + chr5_2:59130739-59130758 Msa0778590:intron 40.0%
! AGCAAAGTTGTTTCCCATGA+TGG + chr5_2:59131038-59131057 Msa0778590:intron 40.0%
! GCAAAGTTGTTTCCCATGAT+GGG + chr5_2:59131039-59131058 Msa0778590:intron 40.0%
CAACAGTGTGCAATTGGATT+AGG - chr5_2:59131200-59131219 None:intergenic 40.0%
ATCAAGGAACGTAAGTTGCA+TGG - chr5_2:59131509-59131528 None:intergenic 40.0%
!!! GTTCCTTGATAGTTTTGGAG+TGG + chr5_2:59131519-59131538 Msa0778590:three_prime_UTR 40.0%
AGATTCACTAGCTCATCAAG+TGG + chr5_2:59131547-59131566 Msa0778590:three_prime_UTR 40.0%
!!! GCTTTGCTTCTTTTTGGTTC+TGG + chr5_2:59132054-59132073 Msa0778590:intron 40.0%
AAGAAAGATTGATAAGCCGG+TGG - chr5_2:59132137-59132156 None:intergenic 40.0%
! ACCGGCTTATCAATCTTTCT+TGG + chr5_2:59132136-59132155 Msa0778590:intron 40.0%
! TTCTTGGATTAGGAAGAGTG+TGG + chr5_2:59132152-59132171 Msa0778590:intron 40.0%
AAGAAATGGAATGGAGACAG+GGG - chr5_2:59132180-59132199 None:intergenic 40.0%
GAAGAAATGGAATGGAGACA+GGG - chr5_2:59132181-59132200 None:intergenic 40.0%
TGAAGAAATGGAATGGAGAC+AGG - chr5_2:59132182-59132201 None:intergenic 40.0%
TCAGAGCTTAGGTTCAAATC+AGG + chr5_2:59132272-59132291 Msa0778590:intron 40.0%
CAATATGGCAAGCACATCAA+TGG + chr5_2:59132553-59132572 Msa0778590:intron 40.0%
!! GTGAGAGTGCCATTCAAAAT+TGG + chr5_2:59132683-59132702 Msa0778590:intron 40.0%
! GAAGAGAAGAAAGCATGGAA+AGG + chr5_2:59132903-59132922 Msa0778590:intron 40.0%
ACTAGTACCTTCATCAAAGC+TGG + chr5_2:59133138-59133157 Msa0778590:intron 40.0%
! ACACATACCAGCTTTGATGA+AGG - chr5_2:59133148-59133167 None:intergenic 40.0%
ATTATGTGTTGCACACTCCA+TGG + chr5_2:59131372-59131391 Msa0778590:intron 40.0%
ATCAAGGAACGTAAGTTGCA+TGG - chr5_2:59131509-59131528 None:intergenic 40.0%
!!! GTTCCTTGATAGTTTTGGAG+TGG + chr5_2:59131519-59131538 Msa0778590:three_prime_UTR 40.0%
AGATTCACTAGCTCATCAAG+TGG + chr5_2:59131547-59131566 Msa0778590:three_prime_UTR 40.0%
GCAGCTGAGATTTCAAACCT+TGG + chr5_2:59126703-59126722 Msa0778590:CDS 45.0%
GATGATTTGAGCAGTAGCCA+AGG - chr5_2:59126723-59126742 None:intergenic 45.0%
GAAGGCTTCAACAGATAAGG+AGG - chr5_2:59126943-59126962 None:intergenic 45.0%
AACTGAACTCGATCGATCCT+CGG - chr5_2:59127151-59127170 None:intergenic 45.0%
TGAATGAGGATCTAGAGGAG+GGG + chr5_2:59127418-59127437 Msa0778590:CDS 45.0%
GCAGTCAAGTGTCTTAGAAG+AGG + chr5_2:59127485-59127504 Msa0778590:CDS 45.0%
! TTGGTTGGTTCTTCAGATGG+AGG - chr5_2:59128433-59128452 None:intergenic 45.0%
! GAGTTGGTTGGTTCTTCAGA+TGG - chr5_2:59128436-59128455 None:intergenic 45.0%
ATGCAATGCACTACATGCAG+AGG + chr5_2:59128845-59128864 Msa0778590:CDS 45.0%
TGAGGTAGAATACAGCGATC+CGG + chr5_2:59128933-59128952 Msa0778590:CDS 45.0%
AGCCGGTCGATTGTTAAAAC+CGG - chr5_2:59128955-59128974 None:intergenic 45.0%
! GAGCTCTTTGTTCGGCTTTT+AGG - chr5_2:59128987-59129006 None:intergenic 45.0%
! AGCACTGAGAGCTCTTTGTT+CGG - chr5_2:59128995-59129014 None:intergenic 45.0%
TACAAGGCTGCAGGAAGAAA+AGG + chr5_2:59129083-59129102 Msa0778590:CDS 45.0%
! AGGTTGATCGCGTTTATGAC+AGG + chr5_2:59129853-59129872 Msa0778590:CDS 45.0%
AATACTTCTCCAATGGAGGG+AGG + chr5_2:59130714-59130733 Msa0778590:intron 45.0%
! CCACACATGATTTTCTCTCG+AGG - chr5_2:59130926-59130945 None:intergenic 45.0%
CCTCGAGAGAAAATCATGTG+TGG + chr5_2:59130923-59130942 Msa0778590:intron 45.0%
GGAAACAACTTTGCTTTCCC+AGG - chr5_2:59131033-59131052 None:intergenic 45.0%
!!! CTTTGCTTTTTACCTGCAGC+TGG + chr5_2:59131065-59131084 Msa0778590:intron 45.0%
CGTGTCATCTTGCTTCAGAT+TGG + chr5_2:59131418-59131437 Msa0778590:intron 45.0%
AGCCCACTCCAAAACTATCA+AGG - chr5_2:59131525-59131544 None:intergenic 45.0%
TCTTAGCACTCAAAGGCCAA+CGG + chr5_2:59131600-59131619 Msa0778590:three_prime_UTR 45.0%
GCTTCGTGACACTCATCATT+TGG + chr5_2:59132246-59132265 Msa0778590:intron 45.0%
TATGGCAAGCACATCAATGG+TGG + chr5_2:59132556-59132575 Msa0778590:intron 45.0%
! GCACATCAATGGTGGAGAAA+TGG + chr5_2:59132564-59132583 Msa0778590:intron 45.0%
GAATGGCACTCTCACTTGTT+TGG - chr5_2:59132678-59132697 None:intergenic 45.0%
AGCGAGAAGAGAAGAAAGCA+TGG + chr5_2:59132898-59132917 Msa0778590:intron 45.0%
GCCAAATCCTGTTGAAGAGA+GGG + chr5_2:59133372-59133391 Msa0778590:intron 45.0%
CCAAATCCTGTTGAAGAGAG+GGG + chr5_2:59133373-59133392 Msa0778590:intron 45.0%
CAAATCCTGTTGAAGAGAGG+GGG + chr5_2:59133374-59133393 Msa0778590:intron 45.0%
CGTGTCATCTTGCTTCAGAT+TGG + chr5_2:59131418-59131437 Msa0778590:intron 45.0%
AGCCCACTCCAAAACTATCA+AGG - chr5_2:59131525-59131544 None:intergenic 45.0%
TCTTAGCACTCAAAGGCCAA+CGG + chr5_2:59131600-59131619 Msa0778590:three_prime_UTR 45.0%
!!! TATTTTAATTAATAATTGTA+AGG + chr5_2:59131804-59131823 Msa0778590:intron 5.0%
!! CAAAAATAAAATAAATTAAA+AGG - chr5_2:59132308-59132327 None:intergenic 5.0%
ACACTTGACTGCGGTTCAAC+TGG - chr5_2:59127477-59127496 None:intergenic 50.0%
CCATGCACTGTCTTTGTACC+TGG - chr5_2:59128016-59128035 None:intergenic 50.0%
CCAGGTACAAAGACAGTGCA+TGG + chr5_2:59128013-59128032 Msa0778590:intron 50.0%
TCTGCTGACCTAGGAGTTTC+AGG - chr5_2:59128826-59128845 None:intergenic 50.0%
TGCATTGCATCTGCTGACCT+AGG - chr5_2:59128835-59128854 None:intergenic 50.0%
ATCAGGAGCAGAAGAATCCG+TGG + chr5_2:59128894-59128913 Msa0778590:CDS 50.0%
ACTTGCAACGCTACCATCCA+CGG - chr5_2:59128914-59128933 None:intergenic 50.0%
GGCAATGATTACAAGGCTGC+AGG + chr5_2:59129074-59129093 Msa0778590:CDS 50.0%
AAGGCTGCAGGAAGAAAAGG+CGG + chr5_2:59129086-59129105 Msa0778590:CDS 50.0%
AGAAAAGGCGGCAATGCAGA+TGG + chr5_2:59129098-59129117 Msa0778590:CDS 50.0%
TGACAGTTCATCGGTGTAGC+CGG - chr5_2:59129361-59129380 None:intergenic 50.0%
TAAATCCCTCCTCCCTCCAT+TGG - chr5_2:59130726-59130745 None:intergenic 50.0%
ATGGAGGGAGGAGGGATTTA+TGG + chr5_2:59130726-59130745 Msa0778590:intron 50.0%
TGATTAGGTGGCGTTTAGCC+TGG + chr5_2:59131012-59131031 Msa0778590:intron 50.0%
GATTAGGTGGCGTTTAGCCT+GGG + chr5_2:59131013-59131032 Msa0778590:intron 50.0%
CATGGGATACATCTGACCGT+TGG - chr5_2:59131619-59131638 None:intergenic 50.0%
CAACGGTCAGATGTATCCCA+TGG + chr5_2:59131617-59131636 Msa0778590:three_prime_UTR 50.0%
GGCCAAATCCTGTTGAAGAG+AGG + chr5_2:59133371-59133390 Msa0778590:intron 50.0%
CCCCTCTCTTCAACAGGATT+TGG - chr5_2:59133376-59133395 None:intergenic 50.0%
TCATTCCCCCTCTCTTCAAC+AGG - chr5_2:59133382-59133401 None:intergenic 50.0%
CATGGGATACATCTGACCGT+TGG - chr5_2:59131619-59131638 None:intergenic 50.0%
CAACGGTCAGATGTATCCCA+TGG + chr5_2:59131617-59131636 Msa0778590:three_prime_UTR 50.0%
TGAGGATCTAGAGGAGGGGA+AGG + chr5_2:59127422-59127441 Msa0778590:CDS 55.0%
GGAGCAGAAGAATCCGTGGA+TGG + chr5_2:59128898-59128917 Msa0778590:CDS 55.0%
! GGATGGTAGCGTTGCAAGTG+AGG + chr5_2:59128915-59128934 Msa0778590:CDS 55.0%
CAACCTTGTTCCGACCCGAT+TGG - chr5_2:59130307-59130326 None:intergenic 55.0%
ACTTCTCCAATGGAGGGAGG+AGG + chr5_2:59130717-59130736 Msa0778590:intron 55.0%
CTTCTCCAATGGAGGGAGGA+GGG + chr5_2:59130718-59130737 Msa0778590:intron 55.0%
AGGTCATTACTGCCAGCTGC+AGG - chr5_2:59131080-59131099 None:intergenic 55.0%
TTGATAAGCCGGTGGATGCG+AGG - chr5_2:59132129-59132148 None:intergenic 55.0%
GATGAGTGTCACGAAGCCGT+CGG - chr5_2:59132243-59132262 None:intergenic 55.0%
GCTCGACATTGTTGCTGCCA+TGG - chr5_2:59132776-59132795 None:intergenic 55.0%
TATCCTCAGAGAGGTGGCCG+AGG + chr5_2:59127131-59127150 Msa0778590:CDS 60.0%
! GATTGGCCAGGTGGCTAGTC+GGG - chr5_2:59130290-59130309 None:intergenic 60.0%
! CGATTGGCCAGGTGGCTAGT+CGG - chr5_2:59130291-59130310 None:intergenic 60.0%
! CGACTAGCCACCTGGCCAAT+CGG + chr5_2:59130289-59130308 Msa0778590:intron 60.0%
! GACTAGCCACCTGGCCAATC+GGG + chr5_2:59130290-59130309 Msa0778590:intron 60.0%
! TTGTTCCGACCCGATTGGCC+AGG - chr5_2:59130302-59130321 None:intergenic 60.0%
TGGCCAATCGGGTCGGAACA+AGG + chr5_2:59130301-59130320 Msa0778590:intron 60.0%
GTGGTGATCCTCGCATCCAC+CGG + chr5_2:59132118-59132137 Msa0778590:intron 60.0%
GATCCTCGGCCACCTCTCTG+AGG - chr5_2:59127137-59127156 None:intergenic 65.0%
AGCCACCTGGCCAATCGGGT+CGG + chr5_2:59130294-59130313 Msa0778590:intron 65.0%
! TTCCGACCCGATTGGCCAGG+TGG - chr5_2:59130299-59130318 None:intergenic 65.0%
! GCTCGGCCCGACTAGCCACC+TGG + chr5_2:59130281-59130300 Msa0778590:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 59126390 59133868 59126390 ID=Msa0778590;Name=Msa0778590
chr5_2 mRNA 59126390 59133868 59126390 ID=Msa0778590-mRNA-1;Parent=Msa0778590;Name=Msa0778590-mRNA-1;_AED=0.14;_eAED=0.14;_QI=61|1|1|1|0.6|0.5|6|479|987
chr5_2 exon 59126390 59127687 59126390 ID=Msa0778590-mRNA-1:exon:17428;Parent=Msa0778590-mRNA-1
chr5_2 exon 59127810 59128016 59127810 ID=Msa0778590-mRNA-1:exon:17429;Parent=Msa0778590-mRNA-1
chr5_2 exon 59128422 59128556 59128422 ID=Msa0778590-mRNA-1:exon:17430;Parent=Msa0778590-mRNA-1
chr5_2 exon 59128692 59130083 59128692 ID=Msa0778590-mRNA-1:exon:17431;Parent=Msa0778590-mRNA-1
chr5_2 exon 59131504 59131730 59131504 ID=Msa0778590-mRNA-1:exon:17432;Parent=Msa0778590-mRNA-1
chr5_2 exon 59133624 59133868 59133624 ID=Msa0778590-mRNA-1:exon:17433;Parent=Msa0778590-mRNA-1
chr5_2 five_prime_UTR 59126390 59126450 59126390 ID=Msa0778590-mRNA-1:five_prime_utr;Parent=Msa0778590-mRNA-1
chr5_2 CDS 59126451 59127687 59126451 ID=Msa0778590-mRNA-1:cds;Parent=Msa0778590-mRNA-1
chr5_2 CDS 59127810 59128016 59127810 ID=Msa0778590-mRNA-1:cds;Parent=Msa0778590-mRNA-1
chr5_2 CDS 59128422 59128556 59128422 ID=Msa0778590-mRNA-1:cds;Parent=Msa0778590-mRNA-1
chr5_2 CDS 59128692 59130076 59128692 ID=Msa0778590-mRNA-1:cds;Parent=Msa0778590-mRNA-1
chr5_2 three_prime_UTR 59130077 59130083 59130077 ID=Msa0778590-mRNA-1:three_prime_utr;Parent=Msa0778590-mRNA-1
chr5_2 three_prime_UTR 59131504 59131730 59131504 ID=Msa0778590-mRNA-1:three_prime_utr;Parent=Msa0778590-mRNA-1
chr5_2 three_prime_UTR 59133624 59133868 59133624 ID=Msa0778590-mRNA-1:three_prime_utr;Parent=Msa0778590-mRNA-1
Gene Sequence

>Msa0778590

ATGGCTGCAAACAAGTTTGCAACCATGTTGCATAGAAACACCAACAAAATAGTTGTAATTCTAGTGTATGCATTTCTTGAATGGATTTTAATTATCTTTCTTCTTCTCAACTCTTTGTTCAGTTATCTTATCACAAAATTTGCCAAATGTTTTGGTCTTAAACCACCTTGTCTTTTCTGTTCAAGGCTTGATCATGTTCTGCATCAAGAGAATAGTAAGTTTTTTCAAAGTGATCTTGTGTGTGAAACTCATGCAGCTGAGATTTCAAACCTTGGCTACTGCTCAAATCATCAAAGATTAGCAGAAACACATAGCATGTGTGAAAATTGCTTGGCTTCTAGGCCAAATCATCATGAAACTGAAAACTCATTTGGTATGAGACATAGGATTGGTTTTATTCCATGGTTAAGTCATGAGAAACATGATGAAAATGGAGAGAGTTTAAATAGGTGTTCTTGCTGCAATGAGAGCTTGAATAACCAAATTTACCCTCCTTATCTGTTGAAGCCTTCTTGGTATGATGGAAACTATTTAAGCAAAAGATCACTCGTTGTTGAATCAATAGAAGATGACAAAGAAGGTGAAAAATACATTGAATTTGAGATAAACAATGGAGAAGATCATGATCATGATGAAGAGGTATTAAATGAGCATCAGATATTTTCTGATATTGAAAGTTTTATCCTCAGAGAGGTGGCCGAGGATCGATCGAGTTCAGTTTCAAACTTGAACTCTGATGAAAAGGATGCAGAAAAAGATGAGAAGGAAGATTATCCAAGTGCTGTTGATGATTTTATTCGTCTATTTTCTGATGCTCCTATTATGCAGGTTTCACATTGTGAAGATAGAACACTTGAAATCATCAATATGCACTTTGAGAACTACAAAGCTTGTGACGATGATGATCGGTTAATACCTGTTAAGTTAATAGATTCTATCACTTGTTTAAATTTTGAATCATGCAAATTGAATGAGGATCTAGAGGAGGGGAAGGAGAAGATTCAAACTTTTGTCGGTGAGTCACCAGTTGAACCGCAGTCAAGTGTCTTAGAAGAGGAAGTATTGATCAAAATGGATGAGAATGCAGAGAAAACAAACATGATGGAGCTTGAAGAAAGTTTGGAAAATTCTATATCTTTAGAAGTTGAAGGGTTAAATCAGAATTCAGTAGTTCAAATTTCTGTGAATGGTGATAATAGTACTGAAGAAGCCACAGAAGAACCAGATAATGCACAAGTTGATCTTTTTCAATCTCAAGAATCGATCTGCTCATATGAATGCACACAAGAAGATGAATCTGGATCAAGTGATGATGATGAGGCTGAAGCTCAAAATGCCTTTGAAAAATTCATTTCTCAGAATAAGCTAAGTATGTCTCACAGTTTATCCGACAATGACAGAAATTTTGAAGCAGATATGGAAGAACAAGAAAAAGCTTCACCAGATAATCTGCCTCCATCTGAAGAACCAACCAACTCAAGTCAATGCATGTCAGAAGATCAATCTTCTTCAAGTGATAGTGAGGATGATACTGAAGTTCATAATGCATTTGATGAATTCATTGCACAAAATAATCTCCATACCGATAAAACCAGTGTAAATGATAATGAAATGGCCGAGAAAACAATATCAGCTGAAAAAATTGAGGAGGAAACAATCCATCAATCATCAAAATGCTCGGAATCGTGTGAACTAGAAGAAGATAAACTTCCTGAAACTCCTAGGTCAGCAGATGCAATGCACTACATGCAGAGGAAATCGATACTCTTTGAGAAAACAGAATCAGGAGCAGAAGAATCCGTGGATGGTAGCGTTGCAAGTGAGGTAGAATACAGCGATCCGGTTTTAACAATCGACCGGCTAAAAGCATCCCTAAAAGCCGAACAAAGAGCTCTCAGTGCTATATATCAAGAACTAGAAGAAGAGAGAAGTGCCTCAGCAATAGCTACTAACCAAACAATGGCAATGATTACAAGGCTGCAGGAAGAAAAGGCGGCAATGCAGATGGAAGCATTACAATACCAAAGAATGATGGAAGAACAAGCTGAATATGATCAAGAAGCTTTACAGCTTTTGAACGATTTAATGACAAAAAGAGAGAAAGAGAAGCAAGAACTTGAGAAGGAATTGGAAGAGTATAGGGAAAAAGTTATGGATTATGAAGCAAAAGAGAAATTAAGAATGTTGAGAAGAATGAAAGATGGAAGTGTAAGAAGTAGAGACTCTTCTTGTTCTTGTTGCAACACCGGCTACACCGATGAACTGTCAGTTGATCTTAACAATGAAGAAAAAGAACAGTATAACAATGCCAATGATGATACCGTTTCTAACTTGGAGGAGATAGCATTAGATTGTGTAAAACATGTAAGTGAACTTGATAGTACTTTAGAAGAATTTGAGGAAGAGAAAGCTTCTATTCTAGATCAACTCAAAGCATTAGAGGAAAAGATAATTTCATTGGAAGATGGTGAAGAATTTCTTGATGAGAGTTCATCAAGATATGGTGATCACAAAGAAGACTATTCTAATGGATTTTCAGATGATAAGCAATCTCCAAGAAGAACAATTGGTTGCTTGGCAAAGAAGTTACTTCCATATTTAGATGAAGCAGAGAATGAGAATGATGAAGAAGCATTTGCATTTGATAGAGAATTGGAGAAAGAATCAAATGATATGCAAATGCAAAACTCAGTTCCTATGATAAGTGAAATGGATAGCATGAAAGTGTGTATTGAAGAAGAGGTTGATCGCGTTTATGACAGGTTACAAGCTCTTGAAACAGATAGAGAATTTCTCCAACATTGTATGGGATCCATACAAAATGGTGGTGATGAAGGAAAGGATTTGCTTCAAGAAATCTTGCAACATCTTCGCGATCTTAAGAATGTTGAATTACGCCTTAAGAACTTGGACAATGATCCATCCACTATAGTTAAGTTGCATTCACCAAGCAAAGACTTGTAG

Protein sequence

>Msa0778590

MAANKFATMLHRNTNKIVVILVYAFLEWILIIFLLLNSLFSYLITKFAKCFGLKPPCLFCSRLDHVLHQENSKFFQSDLVCETHAAEISNLGYCSNHQRLAETHSMCENCLASRPNHHETENSFGMRHRIGFIPWLSHEKHDENGESLNRCSCCNESLNNQIYPPYLLKPSWYDGNYLSKRSLVVESIEDDKEGEKYIEFEINNGEDHDHDEEVLNEHQIFSDIESFILREVAEDRSSSVSNLNSDEKDAEKDEKEDYPSAVDDFIRLFSDAPIMQVSHCEDRTLEIINMHFENYKACDDDDRLIPVKLIDSITCLNFESCKLNEDLEEGKEKIQTFVGESPVEPQSSVLEEEVLIKMDENAEKTNMMELEESLENSISLEVEGLNQNSVVQISVNGDNSTEEATEEPDNAQVDLFQSQESICSYECTQEDESGSSDDDEAEAQNAFEKFISQNKLSMSHSLSDNDRNFEADMEEQEKASPDNLPPSEEPTNSSQCMSEDQSSSSDSEDDTEVHNAFDEFIAQNNLHTDKTSVNDNEMAEKTISAEKIEEETIHQSSKCSESCELEEDKLPETPRSADAMHYMQRKSILFEKTESGAEESVDGSVASEVEYSDPVLTIDRLKASLKAEQRALSAIYQELEEERSASAIATNQTMAMITRLQEEKAAMQMEALQYQRMMEEQAEYDQEALQLLNDLMTKREKEKQELEKELEEYREKVMDYEAKEKLRMLRRMKDGSVRSRDSSCSCCNTGYTDELSVDLNNEEKEQYNNANDDTVSNLEEIALDCVKHVSELDSTLEEFEEEKASILDQLKALEEKIISLEDGEEFLDESSSRYGDHKEDYSNGFSDDKQSPRRTIGCLAKKLLPYLDEAENENDEEAFAFDRELEKESNDMQMQNSVPMISEMDSMKVCIEEEVDRVYDRLQALETDREFLQHCMGSIQNGGDEGKDLLQEILQHLRDLKNVELRLKNLDNDPSTIVKLHSPSKDL*