Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0021500 | 0.830502 | 2.833301e-55 | -8.615850e-47 |
| Msa0014990 | Msa0021500 | 0.804952 | 1.687575e-49 | -8.615850e-47 |
| Msa0018160 | Msa0021500 | 0.819686 | 1.019279e-52 | -8.615850e-47 |
| Msa0021500 | Msa0027280 | 0.806305 | 8.773713e-50 | -8.615850e-47 |
| Msa0021500 | Msa0028420 | 0.847235 | 1.314530e-59 | -8.615850e-47 |
| Msa0021500 | Msa0030370 | 0.814897 | 1.218969e-51 | -8.615850e-47 |
| Msa0021500 | Msa0032920 | -0.815308 | 9.879619e-52 | -8.615850e-47 |
| Msa0021500 | Msa0032960 | -0.827072 | 1.913910e-54 | -8.615850e-47 |
| Msa0021500 | Msa0034270 | 0.807994 | 3.851367e-50 | -8.615850e-47 |
| Msa0021500 | Msa0036870 | 0.836876 | 7.236357e-57 | -8.615850e-47 |
| Msa0021500 | Msa0042610 | 0.842461 | 2.549455e-58 | -8.615850e-47 |
| Msa0021500 | Msa0047030 | 0.801014 | 1.099554e-48 | -8.615850e-47 |
| Msa0021500 | Msa0054690 | 0.817250 | 3.635786e-52 | -8.615850e-47 |
| Msa0021500 | Msa0081090 | 0.802003 | 6.894880e-49 | -8.615850e-47 |
| Msa0021500 | Msa0081520 | 0.827296 | 1.692377e-54 | -8.615850e-47 |
| Msa0021500 | Msa0089630 | 0.816377 | 5.706100e-52 | -8.615850e-47 |
| Msa0021500 | Msa0090400 | 0.821167 | 4.663572e-53 | -8.615850e-47 |
| Msa0021500 | Msa0092790 | 0.829176 | 5.958393e-55 | -8.615850e-47 |
| Msa0021500 | Msa0097260 | 0.819193 | 1.320677e-52 | -8.615850e-47 |
| Msa0021500 | Msa0124060 | 0.841167 | 5.598998e-58 | -8.615850e-47 |
| Msa0021500 | Msa0125550 | 0.939881 | 6.017099e-100 | -8.615850e-47 |
| Msa0021500 | Msa0131900 | 0.811169 | 8.006527e-51 | -8.615850e-47 |
| Msa0021500 | Msa0136650 | 0.824523 | 7.709604e-54 | -8.615850e-47 |
| Msa0021500 | Msa0137880 | 0.805117 | 1.558392e-49 | -8.615850e-47 |
| Msa0021500 | Msa0146040 | 0.817903 | 2.590579e-52 | -8.615850e-47 |
| Msa0021500 | Msa0168500 | 0.845767 | 3.307848e-59 | -8.615850e-47 |
| Msa0021500 | Msa0173730 | 0.812745 | 3.632573e-51 | -8.615850e-47 |
| Msa0021500 | Msa0174450 | 0.801340 | 9.429056e-49 | -8.615850e-47 |
| Msa0021500 | Msa0178560 | 0.848015 | 8.021616e-60 | -8.615850e-47 |
| Msa0021500 | Msa0182190 | 0.812573 | 3.961780e-51 | -8.615850e-47 |
| Msa0021500 | Msa0182240 | 0.816262 | 6.053857e-52 | -8.615850e-47 |
| Msa0021500 | Msa0190570 | 0.813021 | 3.159924e-51 | -8.615850e-47 |
| Msa0021500 | Msa0205840 | 0.803426 | 3.505997e-49 | -8.615850e-47 |
| Msa0021500 | Msa0223080 | 0.817676 | 2.914810e-52 | -8.615850e-47 |
| Msa0021500 | Msa0225100 | 0.804155 | 2.474327e-49 | -8.615850e-47 |
| Msa0021500 | Msa0225460 | 0.822290 | 2.563409e-53 | -8.615850e-47 |
| Msa0021500 | Msa0225680 | 0.827702 | 1.351789e-54 | -8.615850e-47 |
| Msa0021500 | Msa0225860 | 0.844008 | 9.864719e-59 | -8.615850e-47 |
| Msa0021500 | Msa0230740 | 0.806294 | 8.820463e-50 | -8.615850e-47 |
| Msa0021500 | Msa0239190 | 0.824310 | 8.649176e-54 | -8.615850e-47 |
| Msa0021500 | Msa0248970 | 0.815816 | 7.616968e-52 | -8.615850e-47 |
| Msa0021500 | Msa0254790 | 0.809917 | 1.492807e-50 | -8.615850e-47 |
| Msa0021500 | Msa0255090 | 0.822405 | 2.411560e-53 | -8.615850e-47 |
| Msa0021500 | Msa0259380 | 0.813619 | 2.335707e-51 | -8.615850e-47 |
| Msa0021500 | Msa0260510 | 0.804207 | 2.413433e-49 | -8.615850e-47 |
| Msa0021500 | Msa0267110 | 0.809340 | 1.986240e-50 | -8.615850e-47 |
| Msa0021500 | Msa0277180 | 0.808705 | 2.715660e-50 | -8.615850e-47 |
| Msa0021500 | Msa0287740 | 0.817606 | 3.021665e-52 | -8.615850e-47 |
| Msa0021500 | Msa0292400 | 0.816965 | 4.211817e-52 | -8.615850e-47 |
| Msa0021500 | Msa0298470 | 0.843375 | 1.456436e-58 | -8.615850e-47 |
| Msa0021500 | Msa0302160 | 0.815646 | 8.308529e-52 | -8.615850e-47 |
| Msa0021500 | Msa0316810 | 0.803678 | 3.108885e-49 | -8.615850e-47 |
| Msa0021500 | Msa0339490 | 0.816141 | 6.442705e-52 | -8.615850e-47 |
| Msa0021500 | Msa0340500 | 0.826842 | 2.172253e-54 | -8.615850e-47 |
| Msa0021500 | Msa0371030 | 0.833384 | 5.500543e-56 | -8.615850e-47 |
| Msa0021500 | Msa0376350 | 0.801083 | 1.064272e-48 | -8.615850e-47 |
| Msa0021500 | Msa0378720 | 0.810168 | 1.318161e-50 | -8.615850e-47 |
| Msa0021500 | Msa0380620 | 0.830949 | 2.201619e-55 | -8.615850e-47 |
| Msa0021500 | Msa0386090 | 0.815217 | 1.035412e-51 | -8.615850e-47 |
| Msa0021500 | Msa0417880 | 0.803609 | 3.212624e-49 | -8.615850e-47 |
| Msa0021500 | Msa0424790 | 0.800986 | 1.113988e-48 | -8.615850e-47 |
| Msa0021500 | Msa0428150 | 0.810331 | 1.215462e-50 | -8.615850e-47 |
| Msa0021500 | Msa0430260 | 0.824738 | 6.859433e-54 | -8.615850e-47 |
| Msa0021500 | Msa0462500 | 0.823042 | 1.713344e-53 | -8.615850e-47 |
| Msa0021500 | Msa0464380 | 0.802813 | 4.695103e-49 | -8.615850e-47 |
| Msa0021500 | Msa0465410 | 0.800904 | 1.157737e-48 | -8.615850e-47 |
| Msa0021500 | Msa0467490 | 0.810738 | 9.927350e-51 | -8.615850e-47 |
| Msa0021500 | Msa0474730 | 0.806598 | 7.609550e-50 | -8.615850e-47 |
| Msa0021500 | Msa0479170 | 0.804739 | 1.869291e-49 | -8.615850e-47 |
| Msa0021500 | Msa0500380 | 0.815001 | 1.155921e-51 | -8.615850e-47 |
| Msa0021500 | Msa0530780 | 0.813434 | 2.564426e-51 | -8.615850e-47 |
| Msa0021500 | Msa0532070 | 0.824734 | 6.873518e-54 | -8.615850e-47 |
| Msa0021500 | Msa0545340 | 0.812078 | 5.080151e-51 | -8.615850e-47 |
| Msa0021500 | Msa0546500 | 0.851245 | 1.006030e-60 | -8.615850e-47 |
| Msa0021500 | Msa0547900 | 0.804817 | 1.800381e-49 | -8.615850e-47 |
| Msa0021500 | Msa0548470 | 0.803550 | 3.304881e-49 | -8.615850e-47 |
| Msa0021500 | Msa0557460 | 0.808746 | 2.661238e-50 | -8.615850e-47 |
| Msa0021500 | Msa0569200 | 0.837080 | 6.417486e-57 | -8.615850e-47 |
| Msa0021500 | Msa0580370 | 0.864565 | 1.110051e-64 | -8.615850e-47 |
| Msa0021500 | Msa0583830 | 0.820300 | 7.376993e-53 | -8.615850e-47 |
| Msa0021500 | Msa0590830 | 0.804015 | 2.645352e-49 | -8.615850e-47 |
| Msa0021500 | Msa0597790 | 0.816454 | 5.483606e-52 | -8.615850e-47 |
| Msa0021500 | Msa0600930 | 0.812034 | 5.194217e-51 | -8.615850e-47 |
| Msa0021500 | Msa0608330 | 0.800380 | 1.480942e-48 | -8.615850e-47 |
| Msa0021500 | Msa0612240 | 0.800018 | 1.754337e-48 | -8.615850e-47 |
| Msa0021500 | Msa0626450 | 0.844976 | 5.413041e-59 | -8.615850e-47 |
| Msa0021500 | Msa0626490 | 0.844701 | 6.424577e-59 | -8.615850e-47 |
| Msa0021500 | Msa0639430 | 0.809073 | 2.265914e-50 | -8.615850e-47 |
| Msa0021500 | Msa0643300 | 0.820983 | 5.140377e-53 | -8.615850e-47 |
| Msa0021500 | Msa0651550 | 0.802075 | 6.662399e-49 | -8.615850e-47 |
| Msa0021500 | Msa0658640 | 0.806019 | 1.007928e-49 | -8.615850e-47 |
| Msa0021500 | Msa0661150 | 0.820547 | 6.473909e-53 | -8.615850e-47 |
| Msa0021500 | Msa0662240 | 0.807440 | 5.049650e-50 | -8.615850e-47 |
| Msa0021500 | Msa0664600 | 0.840710 | 7.382230e-58 | -8.615850e-47 |
| Msa0021500 | Msa0677410 | 0.836886 | 7.193622e-57 | -8.615850e-47 |
| Msa0021500 | Msa0679870 | 0.800705 | 1.271657e-48 | -8.615850e-47 |
| Msa0021500 | Msa0683570 | 0.847572 | 1.062261e-59 | -8.615850e-47 |
| Msa0021500 | Msa0689230 | 0.800715 | 1.265277e-48 | -8.615850e-47 |
| Msa0021500 | Msa0689520 | 0.812574 | 3.959738e-51 | -8.615850e-47 |
| Msa0021500 | Msa0718550 | 0.801387 | 9.224071e-49 | -8.615850e-47 |
| Msa0021500 | Msa0721080 | 0.807249 | 5.542612e-50 | -8.615850e-47 |
| Msa0021500 | Msa0735780 | 0.806282 | 8.873265e-50 | -8.615850e-47 |
| Msa0021500 | Msa0741220 | 0.810534 | 1.098688e-50 | -8.615850e-47 |
| Msa0021500 | Msa0754520 | 0.805513 | 1.287119e-49 | -8.615850e-47 |
| Msa0021500 | Msa0761670 | 0.820737 | 5.856038e-53 | -8.615850e-47 |
| Msa0021500 | Msa0770720 | 0.822644 | 2.121397e-53 | -8.615850e-47 |
| Msa0021500 | Msa0795870 | 0.867839 | 1.017524e-65 | -8.615850e-47 |
| Msa0021500 | Msa0824450 | 0.802619 | 5.147457e-49 | -8.615850e-47 |
| Msa0021500 | Msa0833220 | 0.804029 | 2.627524e-49 | -8.615850e-47 |
| Msa0021500 | Msa0833650 | 0.868898 | 4.637644e-66 | -8.615850e-47 |
| Msa0021500 | Msa0835960 | 0.803341 | 3.651582e-49 | -8.615850e-47 |
| Msa0021500 | Msa0861600 | 0.805060 | 1.601540e-49 | -8.615850e-47 |
| Msa0021500 | Msa0896540 | 0.802255 | 6.118708e-49 | -8.615850e-47 |
| Msa0021500 | Msa0941190 | 0.812421 | 4.275050e-51 | -8.615850e-47 |
| Msa0021500 | Msa0945110 | 0.814554 | 1.452211e-51 | -8.615850e-47 |
| Msa0021500 | Msa0967870 | 0.806675 | 7.330338e-50 | -8.615850e-47 |
| Msa0021500 | Msa0975750 | 0.814580 | 1.433065e-51 | -8.615850e-47 |
| Msa0021500 | Msa0975810 | 0.803950 | 2.729459e-49 | -8.615850e-47 |
| Msa0021500 | Msa0979730 | 0.818665 | 1.741336e-52 | -8.615850e-47 |
| Msa0021500 | Msa1028100 | 0.803119 | 4.058468e-49 | -8.615850e-47 |
| Msa0021500 | Msa1045140 | 0.834380 | 3.099445e-56 | -8.615850e-47 |
| Msa0021500 | Msa1084960 | 0.805787 | 1.127603e-49 | -8.615850e-47 |
| Msa0021500 | Msa1103990 | 0.817266 | 3.605828e-52 | -8.615850e-47 |
| Msa0021500 | Msa1117920 | 0.814612 | 1.409971e-51 | -8.615850e-47 |
| Msa0021500 | Msa1123380 | 0.800965 | 1.125192e-48 | -8.615850e-47 |
| Msa0021500 | Msa1132840 | 0.863328 | 2.693035e-64 | -8.615850e-47 |
| Msa0021500 | Msa1140210 | 0.826433 | 2.720752e-54 | -8.615850e-47 |
| Msa0021500 | Msa1140220 | 0.808168 | 3.535673e-50 | -8.615850e-47 |
| Msa0021500 | Msa1161680 | 0.826926 | 2.075048e-54 | -8.615850e-47 |
| Msa0021500 | Msa1177320 | 0.822623 | 2.145857e-53 | -8.615850e-47 |
| Msa0021500 | Msa1182860 | 0.804569 | 2.028613e-49 | -8.615850e-47 |
| Msa0021500 | Msa1186020 | 0.847205 | 1.339938e-59 | -8.615850e-47 |
| Msa0021500 | Msa1192090 | 0.814828 | 1.262580e-51 | -8.615850e-47 |
| Msa0021500 | Msa1199570 | 0.806842 | 6.760222e-50 | -8.615850e-47 |
| Msa0021500 | Msa1200570 | 0.800434 | 1.443641e-48 | -8.615850e-47 |
| Msa0021500 | Msa1206460 | 0.806771 | 6.996321e-50 | -8.615850e-47 |
| Msa0021500 | Msa1208950 | 0.817256 | 3.624609e-52 | -8.615850e-47 |
| Msa0021500 | Msa1209460 | 0.803391 | 3.564969e-49 | -8.615850e-47 |
| Msa0021500 | Msa1224930 | 0.805104 | 1.568168e-49 | -8.615850e-47 |
| Msa0021500 | Msa1226520 | 0.807417 | 5.106113e-50 | -8.615850e-47 |
| Msa0021500 | Msa1232710 | 0.804652 | 1.949048e-49 | -8.615850e-47 |
| Msa0021500 | Msa1251930 | 0.822554 | 2.225766e-53 | -8.615850e-47 |
| Msa0021500 | Msa1269480 | 0.818002 | 2.460055e-52 | -8.615850e-47 |
| Msa0021500 | Msa1277150 | 0.800567 | 1.356763e-48 | -8.615850e-47 |
| Msa0021500 | Msa1277220 | 0.805248 | 1.462833e-49 | -8.615850e-47 |
| Msa0021500 | Msa1293870 | 0.816703 | 4.823513e-52 | -8.615850e-47 |
| Msa0021500 | Msa1297230 | 0.826254 | 3.001117e-54 | -8.615850e-47 |
| Msa0021500 | Msa1298220 | 0.805602 | 1.233215e-49 | -8.615850e-47 |
| Msa0021500 | Msa1313300 | 0.801774 | 7.683692e-49 | -8.615850e-47 |
| Msa0021500 | Msa1321340 | 0.816864 | 4.437520e-52 | -8.615850e-47 |
| Msa0021500 | Msa1328710 | 0.814104 | 1.825658e-51 | -8.615850e-47 |
| Msa0021500 | Msa1330410 | 0.806278 | 8.889421e-50 | -8.615850e-47 |
| Msa0021500 | Msa1343170 | 0.807518 | 4.860523e-50 | -8.615850e-47 |
| Msa0021500 | Msa1343180 | 0.821435 | 4.043613e-53 | -8.615850e-47 |
| Msa0021500 | Msa1343430 | 0.802457 | 5.560235e-49 | -8.615850e-47 |
| Msa0021500 | Msa1356830 | 0.812687 | 3.740361e-51 | -8.615850e-47 |
| Msa0021500 | Msa1359690 | 0.811898 | 5.559989e-51 | -8.615850e-47 |
| Msa0021500 | Msa1369150 | 0.813676 | 2.268954e-51 | -8.615850e-47 |
| Msa0021500 | Msa1370010 | 0.804413 | 2.186293e-49 | -8.615850e-47 |
| Msa0021500 | Msa1372230 | 0.860695 | 1.726764e-63 | -8.615850e-47 |
| Msa0021500 | Msa1373100 | 0.806283 | 8.868619e-50 | -8.615850e-47 |
| Msa0021500 | Msa1390440 | 0.819035 | 1.434631e-52 | -8.615850e-47 |
| Msa0021500 | Msa1392580 | 0.804486 | 2.111248e-49 | -8.615850e-47 |
| Msa0021500 | Msa1396030 | 0.816266 | 6.042177e-52 | -8.615850e-47 |
| Msa0021500 | Msa1397400 | 0.823705 | 1.199767e-53 | -8.615850e-47 |
| Msa0021500 | Msa1398340 | 0.804798 | 1.816819e-49 | -8.615850e-47 |
| Msa0021500 | Msa1422420 | 0.815839 | 7.525958e-52 | -8.615850e-47 |
| Msa0021500 | Msa1422950 | 0.806224 | 9.124242e-50 | -8.615850e-47 |
| Msa0021500 | Msa1440960 | 0.837537 | 4.901547e-57 | -8.615850e-47 |
| Msa0021500 | Msa1446820 | 0.817144 | 3.839909e-52 | -8.615850e-47 |
| Msa0021500 | Msa1454140 | 0.838790 | 2.333004e-57 | -8.615850e-47 |
| Msa0021500 | Msa1464810 | 0.816347 | 5.796394e-52 | -8.615850e-47 |
| Msa0021500 | Msa1465440 | 0.972010 | 4.495753e-134 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021500 | MtrunA17_Chr1g0186341 | 95.667 | 300 | 11 | 2 | 1 | 300 | 1 | 298 | 0.0 | 575 |
| Msa0021500 | MtrunA17_Chr1g0183391 | 27.729 | 339 | 187 | 10 | 1 | 299 | 1 | 321 | 1.66e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021500 | AT2G33400.1 | 29.545 | 308 | 139 | 10 | 1 | 289 | 1 | 249 | 1.82e-24 | 100 |
| Msa0021500 | AT5G44040.1 | 33.108 | 296 | 145 | 11 | 30 | 299 | 71 | 339 | 1.06e-18 | 86.3 |
| Msa0021500 | AT1G04030.2 | 27.554 | 323 | 177 | 11 | 1 | 286 | 1 | 303 | 7.75e-13 | 68.9 |
| Msa0021500 | AT1G04030.1 | 27.554 | 323 | 177 | 11 | 1 | 286 | 1 | 303 | 7.75e-13 | 68.9 |
Find 60 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAAAGAAAGAAAGAAAA+TGG | 0.158174 | 1_1:-38382078 | Msa0021500:exon |
| CCCTAGTTCTTATCAGGTTT+TGG | 0.222472 | 1_1:-38381639 | Msa0021500:CDS |
| GATGAAAGTTTGGAGAATTA+TGG | 0.268950 | 1_1:-38381407 | Msa0021500:CDS |
| GGCAAACCCTAGTTCTTATC+AGG | 0.299458 | 1_1:-38381645 | Msa0021500:CDS |
| ACAAACCTGATTTCAGAATA+TGG | 0.325794 | 1_1:+38381842 | None:intergenic |
| TTTCTTTCTTTCTCTTTCAA+TGG | 0.327083 | 1_1:+38382090 | None:intergenic |
| TTGTACCATATTCTGAAATC+AGG | 0.328302 | 1_1:-38381847 | Msa0021500:intron |
| TGATGAGGAAGATGAAAATA+AGG | 0.334449 | 1_1:-38381609 | Msa0021500:CDS |
| ATGAAAGTTTGGAGAATTAT+GGG | 0.338370 | 1_1:-38381406 | Msa0021500:CDS |
| TTGGGATGATGATGAAAGTT+TGG | 0.373619 | 1_1:-38381417 | Msa0021500:CDS |
| TTCATTCATTAAAAGTTTGT+TGG | 0.384333 | 1_1:-38380906 | Msa0021500:three_prime_UTR |
| TCATTCATTAAAAGTTTGTT+GGG | 0.396716 | 1_1:-38380905 | Msa0021500:three_prime_UTR |
| GGAGGATGAAATAGTGTATG+AGG | 0.408167 | 1_1:-38381489 | Msa0021500:CDS |
| AAGAAAGAAAGAAAGAAAAT+GGG | 0.409644 | 1_1:-38382077 | Msa0021500:exon |
| TCAGTCGAAGCCTTTGTTGC+AGG | 0.410456 | 1_1:-38381087 | Msa0021500:CDS |
| GAAGTTCTCGCCTTGCGTCT+TGG | 0.432670 | 1_1:-38381123 | Msa0021500:CDS |
| AATTTGATGATGGGTATGAT+TGG | 0.438767 | 1_1:-38381436 | Msa0021500:CDS |
| AACAGTGAACAGAAAGAAGA+TGG | 0.438966 | 1_1:-38381362 | Msa0021500:CDS |
| TGCTAGTCTTTCAAACTGGT+TGG | 0.449139 | 1_1:-38381051 | Msa0021500:CDS |
| GATGATGATGAATTTGATGA+TGG | 0.451253 | 1_1:-38381446 | Msa0021500:CDS |
| AAGCATGCTGCCTGTAGTCT+TGG | 0.451334 | 1_1:-38381156 | Msa0021500:CDS |
| CAACAAAGGCTTCGACTGAA+TGG | 0.464145 | 1_1:+38381091 | None:intergenic |
| ACTGCAATTTCCTGCAACAA+AGG | 0.476203 | 1_1:+38381077 | None:intergenic |
| TGTTGCAGCTATGCAATTTG+AGG | 0.478704 | 1_1:-38380767 | None:intergenic |
| TTGATGCTAGTCTTTCAAAC+TGG | 0.480004 | 1_1:-38381055 | Msa0021500:CDS |
| TAGAGGTAGAGATCAAGAAA+AGG | 0.488908 | 1_1:-38381735 | Msa0021500:CDS |
| CATTGAGTAAGATTCTCTAC+CGG | 0.490839 | 1_1:+38381251 | None:intergenic |
| CGGTAGAGAATCTTACTCAA+TGG | 0.500520 | 1_1:-38381250 | Msa0021500:CDS |
| TTTGAATGTAGAGATGTATG+AGG | 0.505130 | 1_1:-38381666 | Msa0021500:CDS |
| TGTCTAAAACAGAAACTCGT+TGG | 0.507304 | 1_1:-38382265 | Msa0021500:five_prime_UTR |
| ACTCTCTACAAAGTCCTAGC+TGG | 0.507971 | 1_1:-38382005 | Msa0021500:CDS |
| GAGCTTGATTCCAAGACTAC+AGG | 0.512568 | 1_1:+38381146 | None:intergenic |
| ATAAGAAAGAATGTTTATGT+TGG | 0.519157 | 1_1:+38382125 | None:intergenic |
| GTCAAGTAAACAAACGAGAA+AGG | 0.525056 | 1_1:-38381204 | Msa0021500:CDS |
| CATGAATTCCGTTCTGCACC+CGG | 0.525680 | 1_1:-38381270 | Msa0021500:CDS |
| TATAATATCTATGATTCGAC+GGG | 0.526124 | 1_1:+38381534 | None:intergenic |
| TCCAAAACCTGATAAGAACT+AGG | 0.528369 | 1_1:+38381638 | None:intergenic |
| TTATAATATCTATGATTCGA+CGG | 0.553522 | 1_1:+38381533 | None:intergenic |
| CCAAAACCTGATAAGAACTA+GGG | 0.562445 | 1_1:+38381639 | None:intergenic |
| ATTTGATGATGGGTATGATT+GGG | 0.562602 | 1_1:-38381435 | Msa0021500:CDS |
| AGAAACTCGTTGGAGCCAAA+CGG | 0.563148 | 1_1:-38382255 | Msa0021500:five_prime_UTR |
| GATCAAGAAAAGGAGAAGAG+TGG | 0.564885 | 1_1:-38381725 | Msa0021500:CDS |
| TTTCTGTTTCTTCAAGCACT+CGG | 0.567496 | 1_1:+38380979 | None:intergenic |
| TAGTTATGACAATGAGGAGG+AGG | 0.567704 | 1_1:-38381507 | Msa0021500:CDS |
| ATGATGATGAATTTGATGAT+GGG | 0.572566 | 1_1:-38381445 | Msa0021500:CDS |
| ACAGTGAACAGAAAGAAGAT+GGG | 0.578317 | 1_1:-38381361 | Msa0021500:CDS |
| ATTGAGTAAGATTCTCTACC+GGG | 0.594847 | 1_1:+38381252 | None:intergenic |
| CGAATTTGAGTGGACGAGAG+AGG | 0.606574 | 1_1:-38381301 | Msa0021500:CDS |
| ATTCTCTACCGGGTGCAGAA+CGG | 0.617190 | 1_1:+38381262 | None:intergenic |
| TCATTGACAACGAATTGTAG+TGG | 0.620784 | 1_1:+38381007 | None:intergenic |
| ACAATTCGTTGTCAATGATG+TGG | 0.639822 | 1_1:-38381002 | Msa0021500:exon |
| ATCGAATTGTGATGCTTCTG+TGG | 0.643973 | 1_1:-38380937 | Msa0021500:three_prime_UTR |
| TGAAAATAAGGAGACTACTG+TGG | 0.644236 | 1_1:-38381597 | Msa0021500:CDS |
| TAACTGTAGTTATGACAATG+AGG | 0.650246 | 1_1:-38381513 | Msa0021500:CDS |
| GCATTCGATTCCAAGACGCA+AGG | 0.653152 | 1_1:+38381113 | None:intergenic |
| GAGTTGAAATCGAATTTGAG+TGG | 0.654782 | 1_1:-38381311 | Msa0021500:CDS |
| GTAGTGGAGACATTATAACT+AGG | 0.665616 | 1_1:+38381023 | None:intergenic |
| TGAAAGTTTGGAGAATTATG+GGG | 0.678615 | 1_1:-38381405 | Msa0021500:CDS |
| ACTGTGGAATCAGAGAGAGA+AGG | 0.685984 | 1_1:-38381581 | Msa0021500:CDS |
| CTGTAGTTATGACAATGAGG+AGG | 0.688122 | 1_1:-38381510 | Msa0021500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTATTTGTTAG+AGG | - | chr1_1:38381293-38381312 | Msa0021500:CDS | 10.0% |
| !!! | TTTTTTATTTTATTTGTTAG+AGG | - | chr1_1:38381293-38381312 | Msa0021500:CDS | 10.0% |
| !! | ATAAGAAAGAATGTTTATGT+TGG | + | chr1_1:38380923-38380942 | None:intergenic | 20.0% |
| !! | AAAGAAAGAAAGAAAGAAAA+TGG | - | chr1_1:38380967-38380986 | Msa0021500:three_prime_UTR | 20.0% |
| !! | AAGAAAGAAAGAAAGAAAAT+GGG | - | chr1_1:38380968-38380987 | Msa0021500:three_prime_UTR | 20.0% |
| !! | TGAAGAAATATTATTGTATG+TGG | - | chr1_1:38381245-38381264 | Msa0021500:CDS | 20.0% |
| !! | TTATAATATCTATGATTCGA+CGG | + | chr1_1:38381515-38381534 | None:intergenic | 20.0% |
| !! | TTCATTCATTAAAAGTTTGT+TGG | - | chr1_1:38382139-38382158 | Msa0021500:five_prime_UTR | 20.0% |
| !!! | TCATTCATTAAAAGTTTGTT+GGG | - | chr1_1:38382140-38382159 | Msa0021500:five_prime_UTR | 20.0% |
| !! | ATAAGAAAGAATGTTTATGT+TGG | + | chr1_1:38380923-38380942 | None:intergenic | 20.0% |
| !! | AAAGAAAGAAAGAAAGAAAA+TGG | - | chr1_1:38380967-38380986 | Msa0021500:three_prime_UTR | 20.0% |
| !! | AAGAAAGAAAGAAAGAAAAT+GGG | - | chr1_1:38380968-38380987 | Msa0021500:three_prime_UTR | 20.0% |
| !! | TGAAGAAATATTATTGTATG+TGG | - | chr1_1:38381245-38381264 | Msa0021500:CDS | 20.0% |
| !! | TTATAATATCTATGATTCGA+CGG | + | chr1_1:38381515-38381534 | None:intergenic | 20.0% |
| !! | TTCATTCATTAAAAGTTTGT+TGG | - | chr1_1:38382139-38382158 | Msa0021500:five_prime_UTR | 20.0% |
| !!! | TCATTCATTAAAAGTTTGTT+GGG | - | chr1_1:38382140-38382159 | Msa0021500:five_prime_UTR | 20.0% |
| ! | TTTCTTTCTTTCTCTTTCAA+TGG | + | chr1_1:38380958-38380977 | None:intergenic | 25.0% |
| !!! | GTTGTTTTGATATACTTACT+TGG | + | chr1_1:38381072-38381091 | None:intergenic | 25.0% |
| ! | ATCAAGAACTTAAGAATGAT+GGG | + | chr1_1:38381094-38381113 | None:intergenic | 25.0% |
| ! | AATCAAGAACTTAAGAATGA+TGG | + | chr1_1:38381095-38381114 | None:intergenic | 25.0% |
| !! | CTTATCTTTTTGCAGAAATA+TGG | - | chr1_1:38381137-38381156 | Msa0021500:CDS | 25.0% |
| ! | TATAATATCTATGATTCGAC+GGG | + | chr1_1:38381514-38381533 | None:intergenic | 25.0% |
| !! | ATGATGATGAATTTGATGAT+GGG | - | chr1_1:38381600-38381619 | Msa0021500:CDS | 25.0% |
| ! | ATGAAAGTTTGGAGAATTAT+GGG | - | chr1_1:38381639-38381658 | Msa0021500:CDS | 25.0% |
| !!! | TCCTGTAATTGTTTTGTTTT+TGG | - | chr1_1:38382196-38382215 | Msa0021500:five_prime_UTR | 25.0% |
| ! | ACCAAAAACAAAACAATTAC+AGG | + | chr1_1:38382200-38382219 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTGGTTTGTGAA+TGG | - | chr1_1:38382207-38382226 | Msa0021500:five_prime_UTR | 25.0% |
| ! | TTTCTTTCTTTCTCTTTCAA+TGG | + | chr1_1:38380958-38380977 | None:intergenic | 25.0% |
| !!! | GTTGTTTTGATATACTTACT+TGG | + | chr1_1:38381072-38381091 | None:intergenic | 25.0% |
| ! | ATCAAGAACTTAAGAATGAT+GGG | + | chr1_1:38381094-38381113 | None:intergenic | 25.0% |
| ! | AATCAAGAACTTAAGAATGA+TGG | + | chr1_1:38381095-38381114 | None:intergenic | 25.0% |
| !! | CTTATCTTTTTGCAGAAATA+TGG | - | chr1_1:38381137-38381156 | Msa0021500:CDS | 25.0% |
| ! | TATAATATCTATGATTCGAC+GGG | + | chr1_1:38381514-38381533 | None:intergenic | 25.0% |
| !! | ATGATGATGAATTTGATGAT+GGG | - | chr1_1:38381600-38381619 | Msa0021500:CDS | 25.0% |
| ! | ATGAAAGTTTGGAGAATTAT+GGG | - | chr1_1:38381639-38381658 | Msa0021500:CDS | 25.0% |
| !!! | TCCTGTAATTGTTTTGTTTT+TGG | - | chr1_1:38382196-38382215 | Msa0021500:five_prime_UTR | 25.0% |
| ! | ACCAAAAACAAAACAATTAC+AGG | + | chr1_1:38382200-38382219 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTGGTTTGTGAA+TGG | - | chr1_1:38382207-38382226 | Msa0021500:five_prime_UTR | 25.0% |
| !! | TTGTACCATATTCTGAAATC+AGG | - | chr1_1:38381198-38381217 | Msa0021500:CDS | 30.0% |
| ACAAACCTGATTTCAGAATA+TGG | + | chr1_1:38381206-38381225 | None:intergenic | 30.0% | |
| TTTGAATGTAGAGATGTATG+AGG | - | chr1_1:38381379-38381398 | Msa0021500:CDS | 30.0% | |
| TGATGAGGAAGATGAAAATA+AGG | - | chr1_1:38381436-38381455 | Msa0021500:CDS | 30.0% | |
| TAACTGTAGTTATGACAATG+AGG | - | chr1_1:38381532-38381551 | Msa0021500:CDS | 30.0% | |
| ! | GATGATGATGAATTTGATGA+TGG | - | chr1_1:38381599-38381618 | Msa0021500:CDS | 30.0% |
| !! | AATTTGATGATGGGTATGAT+TGG | - | chr1_1:38381609-38381628 | Msa0021500:CDS | 30.0% |
| !! | ATTTGATGATGGGTATGATT+GGG | - | chr1_1:38381610-38381629 | Msa0021500:CDS | 30.0% |
| GATGAAAGTTTGGAGAATTA+TGG | - | chr1_1:38381638-38381657 | Msa0021500:CDS | 30.0% | |
| TGAAAGTTTGGAGAATTATG+GGG | - | chr1_1:38381640-38381659 | Msa0021500:CDS | 30.0% | |
| !! | TTGTACCATATTCTGAAATC+AGG | - | chr1_1:38381198-38381217 | Msa0021500:CDS | 30.0% |
| ACAAACCTGATTTCAGAATA+TGG | + | chr1_1:38381206-38381225 | None:intergenic | 30.0% | |
| TTTGAATGTAGAGATGTATG+AGG | - | chr1_1:38381379-38381398 | Msa0021500:CDS | 30.0% | |
| TGATGAGGAAGATGAAAATA+AGG | - | chr1_1:38381436-38381455 | Msa0021500:CDS | 30.0% | |
| TAACTGTAGTTATGACAATG+AGG | - | chr1_1:38381532-38381551 | Msa0021500:CDS | 30.0% | |
| ! | GATGATGATGAATTTGATGA+TGG | - | chr1_1:38381599-38381618 | Msa0021500:CDS | 30.0% |
| !! | AATTTGATGATGGGTATGAT+TGG | - | chr1_1:38381609-38381628 | Msa0021500:CDS | 30.0% |
| !! | ATTTGATGATGGGTATGATT+GGG | - | chr1_1:38381610-38381629 | Msa0021500:CDS | 30.0% |
| GATGAAAGTTTGGAGAATTA+TGG | - | chr1_1:38381638-38381657 | Msa0021500:CDS | 30.0% | |
| TGAAAGTTTGGAGAATTATG+GGG | - | chr1_1:38381640-38381659 | Msa0021500:CDS | 30.0% | |
| ! | TGTCTAAAACAGAAACTCGT+TGG | - | chr1_1:38380780-38380799 | Msa0021500:three_prime_UTR | 35.0% |
| !! | GGTTGTTTTCTTCAGTGTTT+TGG | - | chr1_1:38380989-38381008 | Msa0021500:exon | 35.0% |
| TAGAGGTAGAGATCAAGAAA+AGG | - | chr1_1:38381310-38381329 | Msa0021500:CDS | 35.0% | |
| CCAAAACCTGATAAGAACTA+GGG | + | chr1_1:38381409-38381428 | None:intergenic | 35.0% | |
| TCCAAAACCTGATAAGAACT+AGG | + | chr1_1:38381410-38381429 | None:intergenic | 35.0% | |
| TGAAAATAAGGAGACTACTG+TGG | - | chr1_1:38381448-38381467 | Msa0021500:CDS | 35.0% | |
| ! | TTGGGATGATGATGAAAGTT+TGG | - | chr1_1:38381628-38381647 | Msa0021500:CDS | 35.0% |
| AACAGTGAACAGAAAGAAGA+TGG | - | chr1_1:38381683-38381702 | Msa0021500:CDS | 35.0% | |
| ACAGTGAACAGAAAGAAGAT+GGG | - | chr1_1:38381684-38381703 | Msa0021500:CDS | 35.0% | |
| GAGTTGAAATCGAATTTGAG+TGG | - | chr1_1:38381734-38381753 | Msa0021500:CDS | 35.0% | |
| ATTGAGTAAGATTCTCTACC+GGG | + | chr1_1:38381796-38381815 | None:intergenic | 35.0% | |
| CATTGAGTAAGATTCTCTAC+CGG | + | chr1_1:38381797-38381816 | None:intergenic | 35.0% | |
| GTCAAGTAAACAAACGAGAA+AGG | - | chr1_1:38381841-38381860 | Msa0021500:intron | 35.0% | |
| !!! | ATGCTTGTTTTTTGCTCTGA+TGG | + | chr1_1:38381875-38381894 | None:intergenic | 35.0% |
| !! | TTGATGCTAGTCTTTCAAAC+TGG | - | chr1_1:38381990-38382009 | Msa0021500:intron | 35.0% |
| ! | GTAGTGGAGACATTATAACT+AGG | + | chr1_1:38382025-38382044 | None:intergenic | 35.0% |
| TCATTGACAACGAATTGTAG+TGG | + | chr1_1:38382041-38382060 | None:intergenic | 35.0% | |
| ACAATTCGTTGTCAATGATG+TGG | - | chr1_1:38382043-38382062 | Msa0021500:CDS | 35.0% | |
| ! | TTTCTGTTTCTTCAAGCACT+CGG | + | chr1_1:38382069-38382088 | None:intergenic | 35.0% |
| ! | TGTCTAAAACAGAAACTCGT+TGG | - | chr1_1:38380780-38380799 | Msa0021500:three_prime_UTR | 35.0% |
| !! | GGTTGTTTTCTTCAGTGTTT+TGG | - | chr1_1:38380989-38381008 | Msa0021500:exon | 35.0% |
| TAGAGGTAGAGATCAAGAAA+AGG | - | chr1_1:38381310-38381329 | Msa0021500:CDS | 35.0% | |
| CCAAAACCTGATAAGAACTA+GGG | + | chr1_1:38381409-38381428 | None:intergenic | 35.0% | |
| TCCAAAACCTGATAAGAACT+AGG | + | chr1_1:38381410-38381429 | None:intergenic | 35.0% | |
| TGAAAATAAGGAGACTACTG+TGG | - | chr1_1:38381448-38381467 | Msa0021500:CDS | 35.0% | |
| ! | TTGGGATGATGATGAAAGTT+TGG | - | chr1_1:38381628-38381647 | Msa0021500:CDS | 35.0% |
| AACAGTGAACAGAAAGAAGA+TGG | - | chr1_1:38381683-38381702 | Msa0021500:CDS | 35.0% | |
| ACAGTGAACAGAAAGAAGAT+GGG | - | chr1_1:38381684-38381703 | Msa0021500:CDS | 35.0% | |
| GAGTTGAAATCGAATTTGAG+TGG | - | chr1_1:38381734-38381753 | Msa0021500:CDS | 35.0% | |
| ATTGAGTAAGATTCTCTACC+GGG | + | chr1_1:38381796-38381815 | None:intergenic | 35.0% | |
| CATTGAGTAAGATTCTCTAC+CGG | + | chr1_1:38381797-38381816 | None:intergenic | 35.0% | |
| GTCAAGTAAACAAACGAGAA+AGG | - | chr1_1:38381841-38381860 | Msa0021500:intron | 35.0% | |
| !!! | ATGCTTGTTTTTTGCTCTGA+TGG | + | chr1_1:38381875-38381894 | None:intergenic | 35.0% |
| !! | TTGATGCTAGTCTTTCAAAC+TGG | - | chr1_1:38381990-38382009 | Msa0021500:intron | 35.0% |
| ! | GTAGTGGAGACATTATAACT+AGG | + | chr1_1:38382025-38382044 | None:intergenic | 35.0% |
| TCATTGACAACGAATTGTAG+TGG | + | chr1_1:38382041-38382060 | None:intergenic | 35.0% | |
| ACAATTCGTTGTCAATGATG+TGG | - | chr1_1:38382043-38382062 | Msa0021500:CDS | 35.0% | |
| ! | TTTCTGTTTCTTCAAGCACT+CGG | + | chr1_1:38382069-38382088 | None:intergenic | 35.0% |
| !!! | GACAGAGTTTTAAAGCCGTT+TGG | + | chr1_1:38380808-38380827 | None:intergenic | 40.0% |
| !! | TTACTTGGTTTTCTCCAGCT+AGG | + | chr1_1:38381057-38381076 | None:intergenic | 40.0% |
| ! | ATTGTATGTGGTTCTGTGAG+TGG | - | chr1_1:38381257-38381276 | Msa0021500:CDS | 40.0% |
| GATCAAGAAAAGGAGAAGAG+TGG | - | chr1_1:38381320-38381339 | Msa0021500:CDS | 40.0% | |
| !! | CCCTAGTTCTTATCAGGTTT+TGG | - | chr1_1:38381406-38381425 | Msa0021500:CDS | 40.0% |
| !!! | GGTTTTGGATGATGATGATG+AGG | - | chr1_1:38381421-38381440 | Msa0021500:CDS | 40.0% |
| CTGTAGTTATGACAATGAGG+AGG | - | chr1_1:38381535-38381554 | Msa0021500:CDS | 40.0% | |
| TAGTTATGACAATGAGGAGG+AGG | - | chr1_1:38381538-38381557 | Msa0021500:CDS | 40.0% | |
| GGAGGATGAAATAGTGTATG+AGG | - | chr1_1:38381556-38381575 | Msa0021500:CDS | 40.0% | |
| CGGTAGAGAATCTTACTCAA+TGG | - | chr1_1:38381795-38381814 | Msa0021500:intron | 40.0% | |
| ACTGCAATTTCCTGCAACAA+AGG | + | chr1_1:38381971-38381990 | None:intergenic | 40.0% | |
| !! | TGCTAGTCTTTCAAACTGGT+TGG | - | chr1_1:38381994-38382013 | Msa0021500:intron | 40.0% |
| ATCGAATTGTGATGCTTCTG+TGG | - | chr1_1:38382108-38382127 | Msa0021500:five_prime_UTR | 40.0% | |
| CATGTTGCAGCTATGCAATT+TGG | - | chr1_1:38382276-38382295 | Msa0021500:five_prime_UTR | 40.0% | |
| !!! | GACAGAGTTTTAAAGCCGTT+TGG | + | chr1_1:38380808-38380827 | None:intergenic | 40.0% |
| !! | TTACTTGGTTTTCTCCAGCT+AGG | + | chr1_1:38381057-38381076 | None:intergenic | 40.0% |
| ! | ATTGTATGTGGTTCTGTGAG+TGG | - | chr1_1:38381257-38381276 | Msa0021500:CDS | 40.0% |
| GATCAAGAAAAGGAGAAGAG+TGG | - | chr1_1:38381320-38381339 | Msa0021500:CDS | 40.0% | |
| !! | CCCTAGTTCTTATCAGGTTT+TGG | - | chr1_1:38381406-38381425 | Msa0021500:CDS | 40.0% |
| !!! | GGTTTTGGATGATGATGATG+AGG | - | chr1_1:38381421-38381440 | Msa0021500:CDS | 40.0% |
| CTGTAGTTATGACAATGAGG+AGG | - | chr1_1:38381535-38381554 | Msa0021500:CDS | 40.0% | |
| TAGTTATGACAATGAGGAGG+AGG | - | chr1_1:38381538-38381557 | Msa0021500:CDS | 40.0% | |
| GGAGGATGAAATAGTGTATG+AGG | - | chr1_1:38381556-38381575 | Msa0021500:CDS | 40.0% | |
| CGGTAGAGAATCTTACTCAA+TGG | - | chr1_1:38381795-38381814 | Msa0021500:intron | 40.0% | |
| ACTGCAATTTCCTGCAACAA+AGG | + | chr1_1:38381971-38381990 | None:intergenic | 40.0% | |
| !! | TGCTAGTCTTTCAAACTGGT+TGG | - | chr1_1:38381994-38382013 | Msa0021500:intron | 40.0% |
| ATCGAATTGTGATGCTTCTG+TGG | - | chr1_1:38382108-38382127 | Msa0021500:five_prime_UTR | 40.0% | |
| AGAAACTCGTTGGAGCCAAA+CGG | - | chr1_1:38380790-38380809 | Msa0021500:three_prime_UTR | 45.0% | |
| ACTCTCTACAAAGTCCTAGC+TGG | - | chr1_1:38381040-38381059 | Msa0021500:CDS | 45.0% | |
| ! | GGCAAACCCTAGTTCTTATC+AGG | - | chr1_1:38381400-38381419 | Msa0021500:CDS | 45.0% |
| ACTGTGGAATCAGAGAGAGA+AGG | - | chr1_1:38381464-38381483 | Msa0021500:CDS | 45.0% | |
| GAGCTTGATTCCAAGACTAC+AGG | + | chr1_1:38381902-38381921 | None:intergenic | 45.0% | |
| CAACAAAGGCTTCGACTGAA+TGG | + | chr1_1:38381957-38381976 | None:intergenic | 45.0% | |
| AGAAACTCGTTGGAGCCAAA+CGG | - | chr1_1:38380790-38380809 | Msa0021500:three_prime_UTR | 45.0% | |
| ACTCTCTACAAAGTCCTAGC+TGG | - | chr1_1:38381040-38381059 | Msa0021500:CDS | 45.0% | |
| ! | GGCAAACCCTAGTTCTTATC+AGG | - | chr1_1:38381400-38381419 | Msa0021500:CDS | 45.0% |
| ACTGTGGAATCAGAGAGAGA+AGG | - | chr1_1:38381464-38381483 | Msa0021500:CDS | 45.0% | |
| GAGCTTGATTCCAAGACTAC+AGG | + | chr1_1:38381902-38381921 | None:intergenic | 45.0% | |
| CAACAAAGGCTTCGACTGAA+TGG | + | chr1_1:38381957-38381976 | None:intergenic | 45.0% | |
| CGAATTTGAGTGGACGAGAG+AGG | - | chr1_1:38381744-38381763 | Msa0021500:intron | 50.0% | |
| CATGAATTCCGTTCTGCACC+CGG | - | chr1_1:38381775-38381794 | Msa0021500:intron | 50.0% | |
| ATTCTCTACCGGGTGCAGAA+CGG | + | chr1_1:38381786-38381805 | None:intergenic | 50.0% | |
| AAGCATGCTGCCTGTAGTCT+TGG | - | chr1_1:38381889-38381908 | Msa0021500:CDS | 50.0% | |
| GCATTCGATTCCAAGACGCA+AGG | + | chr1_1:38381935-38381954 | None:intergenic | 50.0% | |
| TCAGTCGAAGCCTTTGTTGC+AGG | - | chr1_1:38381958-38381977 | Msa0021500:intron | 50.0% | |
| CGAATTTGAGTGGACGAGAG+AGG | - | chr1_1:38381744-38381763 | Msa0021500:intron | 50.0% | |
| CATGAATTCCGTTCTGCACC+CGG | - | chr1_1:38381775-38381794 | Msa0021500:intron | 50.0% | |
| ATTCTCTACCGGGTGCAGAA+CGG | + | chr1_1:38381786-38381805 | None:intergenic | 50.0% | |
| AAGCATGCTGCCTGTAGTCT+TGG | - | chr1_1:38381889-38381908 | Msa0021500:CDS | 50.0% | |
| GCATTCGATTCCAAGACGCA+AGG | + | chr1_1:38381935-38381954 | None:intergenic | 50.0% | |
| TCAGTCGAAGCCTTTGTTGC+AGG | - | chr1_1:38381958-38381977 | Msa0021500:intron | 50.0% | |
| GAAGTTCTCGCCTTGCGTCT+TGG | - | chr1_1:38381922-38381941 | Msa0021500:intron | 55.0% | |
| GAAGTTCTCGCCTTGCGTCT+TGG | - | chr1_1:38381922-38381941 | Msa0021500:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 38380770 | 38382297 | 38380770 | ID=Msa0021500;Name=Msa0021500 |
| chr1_1 | mRNA | 38380770 | 38382297 | 38380770 | ID=Msa0021500-mRNA-1;Parent=Msa0021500;Name=Msa0021500-mRNA-1;_AED=0.03;_eAED=0.03;_QI=216|1|1|1|1|1|3|237|300 |
| chr1_1 | exon | 38380770 | 38381754 | 38380770 | ID=Msa0021500-mRNA-1:exon:11872;Parent=Msa0021500-mRNA-1 |
| chr1_1 | exon | 38381848 | 38381915 | 38381848 | ID=Msa0021500-mRNA-1:exon:11871;Parent=Msa0021500-mRNA-1 |
| chr1_1 | exon | 38381995 | 38382297 | 38381995 | ID=Msa0021500-mRNA-1:exon:11870;Parent=Msa0021500-mRNA-1 |
| chr1_1 | five_prime_UTR | 38382082 | 38382297 | 38382082 | ID=Msa0021500-mRNA-1:five_prime_utr;Parent=Msa0021500-mRNA-1 |
| chr1_1 | CDS | 38381995 | 38382081 | 38381995 | ID=Msa0021500-mRNA-1:cds;Parent=Msa0021500-mRNA-1 |
| chr1_1 | CDS | 38381848 | 38381915 | 38381848 | ID=Msa0021500-mRNA-1:cds;Parent=Msa0021500-mRNA-1 |
| chr1_1 | CDS | 38381007 | 38381754 | 38381007 | ID=Msa0021500-mRNA-1:cds;Parent=Msa0021500-mRNA-1 |
| chr1_1 | three_prime_UTR | 38380770 | 38381006 | 38380770 | ID=Msa0021500-mRNA-1:three_prime_utr;Parent=Msa0021500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
