Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362350 | XP_003588859.1 | 97.731 | 617 | 14 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362350 | sp|Q8H1D3|NPY1_ARATH | 57.966 | 590 | 187 | 13 | 1 | 581 | 1 | 538 | 0.0 | 651 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362350 | G7I878 | 97.731 | 617 | 14 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1237 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005710 | Msa1362350 | 0.982044 | 4.325612e-154 | -8.615850e-47 |
| Msa0018220 | Msa1362350 | 0.812942 | 3.288882e-51 | -8.615850e-47 |
| Msa0046750 | Msa1362350 | 0.804372 | 2.229288e-49 | -8.615850e-47 |
| Msa0052460 | Msa1362350 | 0.802597 | 5.203006e-49 | -8.615850e-47 |
| Msa0059960 | Msa1362350 | -0.800372 | 1.486305e-48 | -8.615850e-47 |
| Msa0064820 | Msa1362350 | 0.808173 | 3.527541e-50 | -8.615850e-47 |
| Msa0079040 | Msa1362350 | 0.987572 | 9.626463e-171 | -8.615850e-47 |
| Msa0097050 | Msa1362350 | 0.813485 | 2.498825e-51 | -8.615850e-47 |
| Msa0109950 | Msa1362350 | 0.821499 | 3.907873e-53 | -8.615850e-47 |
| Msa1354040 | Msa1362350 | 0.802743 | 4.853890e-49 | -8.615850e-47 |
| Msa1362350 | Msa1407710 | 0.819097 | 1.389171e-52 | -8.615850e-47 |
| Msa1362350 | Msa1418200 | 0.816150 | 6.415349e-52 | -8.615850e-47 |
| Msa1362350 | Msa1420060 | 0.803424 | 3.509128e-49 | -8.615850e-47 |
| Msa1362350 | Msa1421810 | 0.814505 | 1.488625e-51 | -8.615850e-47 |
| Msa1362350 | Msa1427390 | 0.801364 | 9.325927e-49 | -8.615850e-47 |
| Msa1362350 | Msa1435040 | 0.817084 | 3.961920e-52 | -8.615850e-47 |
| Msa1362350 | Msa1435050 | 0.823396 | 1.416886e-53 | -8.615850e-47 |
| Msa1362350 | Msa1439670 | 0.823780 | 1.152071e-53 | -8.615850e-47 |
| Msa0619330 | Msa1362350 | 0.803415 | 3.525005e-49 | -8.615850e-47 |
| Msa0625530 | Msa1362350 | -0.803039 | 4.217009e-49 | -8.615850e-47 |
| Msa0642650 | Msa1362350 | 0.804945 | 1.692915e-49 | -8.615850e-47 |
| Msa0645050 | Msa1362350 | 0.807176 | 5.743396e-50 | -8.615850e-47 |
| Msa0691160 | Msa1362350 | 0.821167 | 4.663339e-53 | -8.615850e-47 |
| Msa0730180 | Msa1362350 | 0.803288 | 3.744875e-49 | -8.615850e-47 |
| Msa0770430 | Msa1362350 | 0.800951 | 1.132568e-48 | -8.615850e-47 |
| Msa0810020 | Msa1362350 | 0.817506 | 3.182943e-52 | -8.615850e-47 |
| Msa0148780 | Msa1362350 | 0.980926 | 2.317874e-151 | -8.615850e-47 |
| Msa0156150 | Msa1362350 | 0.810184 | 1.307725e-50 | -8.615850e-47 |
| Msa1254770 | Msa1362350 | 0.811518 | 6.727131e-51 | -8.615850e-47 |
| Msa1254800 | Msa1362350 | 0.811059 | 8.462166e-51 | -8.615850e-47 |
| Msa1261360 | Msa1362350 | 0.814506 | 1.488345e-51 | -8.615850e-47 |
| Msa1261400 | Msa1362350 | 0.801234 | 9.914011e-49 | -8.615850e-47 |
| Msa0374070 | Msa1362350 | 0.812007 | 5.263967e-51 | -8.615850e-47 |
| Msa0413930 | Msa1362350 | 0.817547 | 3.116610e-52 | -8.615850e-47 |
| Msa0418480 | Msa1362350 | 0.807405 | 5.136394e-50 | -8.615850e-47 |
| Msa0423250 | Msa1362350 | 0.813977 | 1.947556e-51 | -8.615850e-47 |
| Msa0465860 | Msa1362350 | 0.802400 | 5.711969e-49 | -8.615850e-47 |
| Msa0469390 | Msa1362350 | 0.807712 | 4.420017e-50 | -8.615850e-47 |
| Msa1008490 | Msa1362350 | 0.810874 | 9.279088e-51 | -8.615850e-47 |
| Msa1010730 | Msa1362350 | 0.819623 | 1.053685e-52 | -8.615850e-47 |
| Msa1014270 | Msa1362350 | 0.806203 | 9.219170e-50 | -8.615850e-47 |
| Msa1040830 | Msa1362350 | 0.802065 | 6.694858e-49 | -8.615850e-47 |
| Msa1055260 | Msa1362350 | 0.800464 | 1.424060e-48 | -8.615850e-47 |
| Msa1055280 | Msa1362350 | 0.815446 | 9.205325e-52 | -8.615850e-47 |
| Msa1055500 | Msa1362350 | 0.802889 | 4.527897e-49 | -8.615850e-47 |
| Msa1098560 | Msa1362350 | 0.809343 | 1.982630e-50 | -8.615850e-47 |
| Msa0264350 | Msa1362350 | 0.800544 | 1.371547e-48 | -8.615850e-47 |
| Msa0298940 | Msa1362350 | 0.808736 | 2.674898e-50 | -8.615850e-47 |
| Msa0342200 | Msa1362350 | 0.800610 | 1.329236e-48 | -8.615850e-47 |
| Msa1129560 | Msa1362350 | 0.832435 | 9.470403e-56 | -8.615850e-47 |
| Msa1129720 | Msa1362350 | 0.831475 | 1.634568e-55 | -8.615850e-47 |
| Msa1221560 | Msa1362350 | 0.812186 | 4.811427e-51 | -8.615850e-47 |
| Msa0524120 | Msa1362350 | 0.808109 | 3.639474e-50 | -8.615850e-47 |
| Msa0546380 | Msa1362350 | 0.828649 | 7.994248e-55 | -8.615850e-47 |
| Msa0575250 | Msa1362350 | 0.803754 | 2.997785e-49 | -8.615850e-47 |
| Msa0577940 | Msa1362350 | -0.804919 | 1.714330e-49 | -8.615850e-47 |
| Msa0890250 | Msa1362350 | 0.813416 | 2.588167e-51 | -8.615850e-47 |
| Msa0925160 | Msa1362350 | 0.810653 | 1.035726e-50 | -8.615850e-47 |
| Msa0930330 | Msa1362350 | 0.801187 | 1.013334e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362350 | MtrunA17_Chr1g0150191 | 97.731 | 617 | 14 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1237 |
| Msa1362350 | MtrunA17_Chr5g0401341 | 50.774 | 646 | 273 | 13 | 1 | 617 | 1 | 630 | 0.0 | 593 |
| Msa1362350 | MtrunA17_Chr1g0207461 | 48.523 | 643 | 287 | 15 | 1 | 617 | 1 | 625 | 0.0 | 551 |
| Msa1362350 | MtrunA17_Chr8g0367891 | 41.129 | 620 | 303 | 13 | 1 | 582 | 1 | 596 | 2.27e-136 | 410 |
| Msa1362350 | MtrunA17_Chr4g0076521 | 39.046 | 566 | 298 | 11 | 1 | 546 | 1 | 539 | 2.60e-134 | 405 |
| Msa1362350 | MtrunA17_Chr5g0412591 | 43.667 | 529 | 227 | 11 | 1 | 493 | 1 | 494 | 1.26e-132 | 401 |
| Msa1362350 | MtrunA17_Chr2g0279481 | 38.262 | 541 | 273 | 9 | 6 | 492 | 19 | 552 | 4.29e-123 | 379 |
| Msa1362350 | MtrunA17_Chr4g0050021 | 38.964 | 521 | 265 | 9 | 22 | 499 | 39 | 549 | 8.76e-123 | 378 |
| Msa1362350 | MtrunA17_Chr2g0290741 | 36.086 | 557 | 314 | 9 | 1 | 548 | 1 | 524 | 6.61e-119 | 365 |
| Msa1362350 | MtrunA17_Chr2g0285511 | 40.748 | 508 | 279 | 11 | 1 | 492 | 1 | 502 | 2.24e-116 | 359 |
| Msa1362350 | MtrunA17_Chr2g0303541 | 35.974 | 606 | 350 | 12 | 1 | 580 | 1 | 594 | 9.11e-116 | 359 |
| Msa1362350 | MtrunA17_Chr1g0181181 | 37.984 | 516 | 271 | 11 | 1 | 496 | 1 | 487 | 4.73e-104 | 326 |
| Msa1362350 | MtrunA17_Chr8g0382231 | 33.645 | 535 | 272 | 10 | 21 | 517 | 46 | 535 | 5.49e-104 | 328 |
| Msa1362350 | MtrunA17_Chr5g0401451 | 37.072 | 526 | 296 | 14 | 23 | 535 | 36 | 539 | 2.31e-102 | 323 |
| Msa1362350 | MtrunA17_Chr2g0320691 | 34.927 | 481 | 289 | 6 | 25 | 487 | 21 | 495 | 1.17e-97 | 311 |
| Msa1362350 | MtrunA17_Chr8g0374011 | 32.843 | 612 | 358 | 14 | 22 | 585 | 15 | 621 | 3.91e-97 | 311 |
| Msa1362350 | MtrunA17_Chr4g0010091 | 36.800 | 500 | 290 | 9 | 18 | 506 | 25 | 509 | 4.27e-97 | 310 |
| Msa1362350 | MtrunA17_Chr4g0053841 | 34.991 | 543 | 313 | 13 | 24 | 546 | 10 | 532 | 1.71e-95 | 305 |
| Msa1362350 | MtrunA17_Chr7g0245201 | 33.333 | 627 | 351 | 15 | 19 | 617 | 53 | 640 | 1.39e-92 | 298 |
| Msa1362350 | MtrunA17_Chr1g0195911 | 36.076 | 474 | 280 | 7 | 25 | 488 | 34 | 494 | 1.20e-89 | 290 |
| Msa1362350 | MtrunA17_Chr1g0199631 | 38.889 | 468 | 261 | 13 | 45 | 496 | 8 | 466 | 1.84e-87 | 283 |
| Msa1362350 | MtrunA17_Chr7g0268781 | 34.490 | 490 | 294 | 10 | 25 | 502 | 34 | 508 | 1.22e-82 | 272 |
| Msa1362350 | MtrunA17_Chr3g0108331 | 33.402 | 488 | 276 | 9 | 12 | 488 | 11 | 460 | 5.09e-80 | 263 |
| Msa1362350 | MtrunA17_Chr1g0191711 | 31.677 | 483 | 274 | 8 | 28 | 501 | 59 | 494 | 4.34e-79 | 260 |
| Msa1362350 | MtrunA17_Chr5g0432861 | 29.821 | 503 | 297 | 10 | 12 | 495 | 12 | 477 | 5.01e-73 | 245 |
| Msa1362350 | MtrunA17_Chr2g0332281 | 40.484 | 289 | 140 | 7 | 213 | 488 | 24 | 293 | 1.08e-56 | 197 |
| Msa1362350 | MtrunA17_Chr4g0003891 | 39.792 | 289 | 140 | 8 | 213 | 488 | 46 | 313 | 2.68e-53 | 189 |
| Msa1362350 | MtrunA17_Chr4g0037661 | 26.682 | 446 | 281 | 11 | 69 | 492 | 49 | 470 | 1.01e-38 | 150 |
| Msa1362350 | MtrunA17_Chr1g0163311 | 25.933 | 509 | 312 | 16 | 30 | 508 | 6 | 479 | 1.07e-38 | 149 |
| Msa1362350 | MtrunA17_Chr4g0023801 | 25.420 | 476 | 319 | 10 | 36 | 505 | 14 | 459 | 9.68e-38 | 147 |
| Msa1362350 | MtrunA17_Chr1g0206621 | 34.302 | 172 | 100 | 2 | 35 | 204 | 76 | 236 | 4.31e-28 | 112 |
| Msa1362350 | MtrunA17_Chr2g0280541 | 25.385 | 390 | 251 | 9 | 93 | 474 | 1 | 358 | 7.85e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362350 | AT4G31820.1 | 57.966 | 590 | 187 | 13 | 1 | 581 | 1 | 538 | 0.0 | 651 |
| Msa1362350 | AT4G31820.2 | 56.797 | 537 | 171 | 13 | 54 | 581 | 1 | 485 | 0.0 | 572 |
| Msa1362350 | AT2G14820.2 | 52.906 | 499 | 223 | 4 | 1 | 493 | 1 | 493 | 1.20e-179 | 523 |
| Msa1362350 | AT2G14820.1 | 52.906 | 499 | 223 | 4 | 1 | 493 | 1 | 493 | 1.20e-179 | 523 |
| Msa1362350 | AT5G67440.3 | 46.942 | 605 | 272 | 11 | 1 | 597 | 1 | 564 | 4.27e-175 | 509 |
| Msa1362350 | AT5G67440.1 | 46.942 | 605 | 272 | 11 | 1 | 597 | 1 | 564 | 4.27e-175 | 509 |
| Msa1362350 | AT4G37590.1 | 46.387 | 595 | 248 | 16 | 1 | 573 | 1 | 546 | 1.00e-167 | 491 |
| Msa1362350 | AT2G23050.1 | 48.406 | 502 | 211 | 9 | 1 | 497 | 1 | 459 | 1.42e-157 | 461 |
| Msa1362350 | AT5G67440.2 | 45.213 | 564 | 260 | 11 | 42 | 597 | 5 | 527 | 2.33e-150 | 445 |
| Msa1362350 | AT1G67900.5 | 45.333 | 525 | 242 | 9 | 1 | 492 | 1 | 513 | 3.46e-142 | 427 |
| Msa1362350 | AT1G67900.1 | 45.333 | 525 | 242 | 9 | 1 | 492 | 1 | 513 | 3.46e-142 | 427 |
| Msa1362350 | AT1G67900.3 | 45.333 | 525 | 242 | 9 | 1 | 492 | 1 | 513 | 3.46e-142 | 427 |
| Msa1362350 | AT1G67900.6 | 45.333 | 525 | 242 | 9 | 1 | 492 | 1 | 513 | 3.46e-142 | 427 |
| Msa1362350 | AT1G67900.2 | 45.333 | 525 | 242 | 9 | 1 | 492 | 1 | 513 | 3.46e-142 | 427 |
| Msa1362350 | AT1G67900.4 | 45.333 | 525 | 242 | 9 | 1 | 492 | 1 | 513 | 3.46e-142 | 427 |
| Msa1362350 | AT3G26490.1 | 41.426 | 519 | 265 | 12 | 1 | 490 | 1 | 509 | 2.79e-124 | 379 |
| Msa1362350 | AT3G26490.3 | 41.426 | 519 | 265 | 12 | 1 | 490 | 1 | 509 | 2.79e-124 | 379 |
| Msa1362350 | AT3G26490.4 | 41.426 | 519 | 265 | 12 | 1 | 490 | 1 | 509 | 2.79e-124 | 379 |
| Msa1362350 | AT5G47800.3 | 38.067 | 507 | 286 | 6 | 1 | 499 | 1 | 487 | 6.07e-123 | 375 |
| Msa1362350 | AT5G47800.1 | 38.067 | 507 | 286 | 6 | 1 | 499 | 1 | 487 | 6.07e-123 | 375 |
| Msa1362350 | AT5G47800.4 | 38.067 | 507 | 286 | 6 | 1 | 499 | 1 | 487 | 6.07e-123 | 375 |
| Msa1362350 | AT5G47800.2 | 38.067 | 507 | 286 | 6 | 1 | 499 | 114 | 600 | 2.01e-121 | 375 |
| Msa1362350 | AT5G03250.1 | 39.038 | 520 | 283 | 11 | 1 | 496 | 1 | 510 | 4.54e-115 | 356 |
| Msa1362350 | AT2G23050.2 | 43.523 | 386 | 175 | 7 | 112 | 497 | 1 | 343 | 6.66e-105 | 322 |
| Msa1362350 | AT1G30440.1 | 35.922 | 515 | 304 | 8 | 1 | 492 | 1 | 512 | 8.93e-104 | 329 |
| Msa1362350 | AT3G26490.2 | 40.558 | 466 | 238 | 12 | 1 | 437 | 1 | 456 | 1.90e-102 | 320 |
| Msa1362350 | AT5G13600.1 | 37.500 | 536 | 294 | 15 | 1 | 512 | 1 | 519 | 4.29e-101 | 320 |
| Msa1362350 | AT5G48800.1 | 38.316 | 475 | 267 | 7 | 22 | 492 | 36 | 488 | 5.23e-97 | 310 |
| Msa1362350 | AT5G67385.1 | 36.786 | 473 | 271 | 9 | 24 | 488 | 22 | 474 | 1.49e-96 | 308 |
| Msa1362350 | AT3G44820.1 | 33.603 | 494 | 297 | 8 | 22 | 487 | 18 | 508 | 4.25e-91 | 295 |
| Msa1362350 | AT1G03010.3 | 35.863 | 527 | 288 | 14 | 12 | 511 | 18 | 521 | 1.84e-89 | 290 |
| Msa1362350 | AT5G66560.1 | 34.615 | 546 | 276 | 12 | 22 | 500 | 14 | 545 | 3.34e-89 | 290 |
| Msa1362350 | AT1G03010.2 | 35.938 | 512 | 280 | 13 | 25 | 511 | 7 | 495 | 7.53e-89 | 288 |
| Msa1362350 | AT1G03010.1 | 35.938 | 512 | 280 | 13 | 25 | 511 | 34 | 522 | 1.28e-88 | 288 |
| Msa1362350 | AT3G08660.1 | 33.450 | 571 | 313 | 12 | 19 | 567 | 26 | 551 | 4.61e-88 | 285 |
| Msa1362350 | AT5G10250.2 | 33.925 | 507 | 250 | 11 | 22 | 488 | 45 | 506 | 7.47e-88 | 286 |
| Msa1362350 | AT2G47860.1 | 37.344 | 482 | 262 | 11 | 25 | 488 | 35 | 494 | 2.52e-87 | 285 |
| Msa1362350 | AT3G08570.1 | 34.146 | 574 | 332 | 14 | 19 | 567 | 26 | 578 | 1.52e-86 | 282 |
| Msa1362350 | AT5G66560.3 | 34.528 | 530 | 266 | 11 | 38 | 500 | 1 | 516 | 5.18e-86 | 281 |
| Msa1362350 | AT5G67385.4 | 36.526 | 449 | 257 | 9 | 48 | 488 | 1 | 429 | 8.33e-86 | 278 |
| Msa1362350 | AT5G67385.5 | 36.526 | 449 | 257 | 9 | 48 | 488 | 1 | 429 | 8.33e-86 | 278 |
| Msa1362350 | AT5G67385.2 | 36.526 | 449 | 257 | 9 | 48 | 488 | 1 | 429 | 8.33e-86 | 278 |
| Msa1362350 | AT5G67385.3 | 36.526 | 449 | 257 | 9 | 48 | 488 | 1 | 429 | 8.33e-86 | 278 |
| Msa1362350 | AT5G10250.1 | 33.468 | 496 | 252 | 10 | 22 | 488 | 45 | 491 | 5.60e-85 | 278 |
| Msa1362350 | AT5G66560.4 | 37.363 | 455 | 248 | 10 | 69 | 500 | 66 | 506 | 3.10e-83 | 274 |
| Msa1362350 | AT3G50840.1 | 35.000 | 480 | 268 | 8 | 22 | 488 | 11 | 459 | 7.98e-83 | 271 |
| Msa1362350 | AT2G47860.3 | 35.644 | 505 | 262 | 12 | 25 | 488 | 35 | 517 | 2.78e-82 | 272 |
| Msa1362350 | AT2G30520.1 | 32.803 | 503 | 278 | 10 | 4 | 488 | 9 | 469 | 1.44e-80 | 266 |
| Msa1362350 | AT3G08660.3 | 33.080 | 526 | 286 | 11 | 64 | 567 | 10 | 491 | 2.18e-77 | 255 |
| Msa1362350 | AT3G49970.1 | 36.180 | 445 | 220 | 11 | 38 | 473 | 5 | 394 | 5.08e-76 | 251 |
| Msa1362350 | AT3G49970.2 | 36.180 | 445 | 220 | 11 | 38 | 473 | 5 | 394 | 5.08e-76 | 251 |
| Msa1362350 | AT3G50840.2 | 34.361 | 454 | 254 | 8 | 48 | 488 | 1 | 423 | 2.86e-73 | 245 |
| Msa1362350 | AT3G50840.3 | 34.361 | 454 | 254 | 8 | 48 | 488 | 1 | 423 | 2.86e-73 | 245 |
| Msa1362350 | AT5G03250.2 | 36.609 | 407 | 227 | 9 | 112 | 496 | 1 | 398 | 4.54e-73 | 243 |
| Msa1362350 | AT2G30520.2 | 33.043 | 460 | 250 | 11 | 47 | 488 | 2 | 421 | 2.19e-71 | 240 |
| Msa1362350 | AT2G30520.3 | 33.043 | 460 | 250 | 11 | 47 | 488 | 2 | 421 | 2.19e-71 | 240 |
| Msa1362350 | AT3G08660.2 | 34.434 | 424 | 239 | 10 | 19 | 437 | 26 | 415 | 1.66e-65 | 221 |
| Msa1362350 | AT2G47860.4 | 35.499 | 431 | 238 | 11 | 25 | 437 | 35 | 443 | 2.83e-65 | 221 |
| Msa1362350 | AT5G66560.2 | 31.875 | 480 | 249 | 10 | 22 | 437 | 14 | 479 | 2.62e-64 | 219 |
| Msa1362350 | AT5G64330.2 | 39.773 | 264 | 143 | 3 | 7 | 256 | 33 | 294 | 2.54e-62 | 218 |
| Msa1362350 | AT5G64330.2 | 37.959 | 245 | 132 | 5 | 271 | 499 | 373 | 613 | 3.76e-43 | 165 |
| Msa1362350 | AT5G64330.1 | 39.773 | 264 | 143 | 3 | 7 | 256 | 33 | 294 | 7.56e-62 | 219 |
| Msa1362350 | AT5G64330.1 | 37.959 | 245 | 132 | 5 | 271 | 499 | 373 | 613 | 3.63e-43 | 166 |
| Msa1362350 | AT2G47860.6 | 33.700 | 454 | 238 | 12 | 25 | 437 | 35 | 466 | 2.13e-60 | 209 |
| Msa1362350 | AT2G47860.5 | 35.443 | 395 | 218 | 10 | 112 | 488 | 1 | 376 | 2.74e-56 | 199 |
| Msa1362350 | AT2G47860.2 | 35.443 | 395 | 218 | 10 | 112 | 488 | 1 | 376 | 2.74e-56 | 199 |
| Msa1362350 | AT1G52770.1 | 37.288 | 295 | 147 | 6 | 213 | 488 | 28 | 303 | 1.95e-54 | 192 |
| Msa1362350 | AT5G64330.3 | 40.693 | 231 | 122 | 2 | 40 | 256 | 6 | 235 | 1.61e-53 | 193 |
| Msa1362350 | AT5G64330.3 | 37.959 | 245 | 132 | 5 | 271 | 499 | 314 | 554 | 1.38e-43 | 165 |
| Msa1362350 | AT5G48130.1 | 25.407 | 492 | 274 | 13 | 27 | 487 | 39 | 468 | 1.31e-52 | 191 |
| Msa1362350 | AT3G15570.1 | 34.783 | 299 | 153 | 7 | 213 | 488 | 29 | 308 | 3.46e-47 | 172 |
| Msa1362350 | AT3G19850.1 | 27.460 | 437 | 275 | 8 | 69 | 487 | 52 | 464 | 1.17e-46 | 173 |
| Msa1362350 | AT5G17580.2 | 27.484 | 473 | 305 | 10 | 23 | 488 | 16 | 457 | 1.21e-41 | 159 |
| Msa1362350 | AT5G17580.1 | 27.484 | 473 | 305 | 10 | 23 | 488 | 1 | 442 | 1.70e-41 | 158 |
| Msa1362350 | AT1G50280.2 | 27.804 | 428 | 277 | 8 | 69 | 482 | 18 | 427 | 1.14e-39 | 152 |
| Msa1362350 | AT1G50280.1 | 27.804 | 428 | 277 | 8 | 69 | 482 | 51 | 460 | 1.41e-39 | 152 |
| Msa1362350 | AT3G03510.1 | 29.762 | 420 | 225 | 15 | 77 | 488 | 4 | 361 | 1.31e-36 | 142 |
| Msa1362350 | AT3G22104.1 | 24.000 | 450 | 287 | 11 | 36 | 473 | 14 | 420 | 6.10e-32 | 130 |
| Msa1362350 | AT3G22104.4 | 23.117 | 385 | 243 | 9 | 99 | 473 | 4 | 345 | 3.12e-22 | 100 |
| Msa1362350 | AT3G22104.2 | 23.117 | 385 | 243 | 9 | 99 | 473 | 4 | 345 | 3.12e-22 | 100 |
| Msa1362350 | AT3G22104.3 | 23.117 | 385 | 243 | 9 | 99 | 473 | 4 | 345 | 3.12e-22 | 100 |
Find 148 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAATTACATAGAATTAAT+TGG | 0.181392 | tig0017827:+28757 | Msa1362350:exon |
| ATTCCTCGTCTCCATTTATT+AGG | 0.216595 | tig0017827:-28421 | Msa1362350:intergenic |
| TCTGAGGATCTAAAGATAAT+TGG | 0.223450 | tig0017827:+27013 | Msa1362350:CDS |
| CAAAAGACATTCTATCTCTT+AGG | 0.246837 | tig0017827:+28736 | Msa1362350:CDS |
| CCTCCACATGCCCTAATAAA+TGG | 0.253864 | tig0017827:+28410 | Msa1362350:CDS |
| ATGTAATGTAATTTGAATTA+AGG | 0.275791 | tig0017827:+28856 | Msa1362350:three_prime_UTR |
| GATATGAAAGATAAAGTATT+TGG | 0.280957 | tig0017827:+27658 | Msa1362350:CDS |
| TGTCAAGGATTTACTGATTC+CGG | 0.288586 | tig0017827:+27534 | Msa1362350:CDS |
| CTGATTCCGGCTAGGTCTCC+TGG | 0.293524 | tig0017827:+27547 | Msa1362350:CDS |
| AATGATAACGGTGAAATCTA+AGG | 0.298241 | tig0017827:+27237 | Msa1362350:CDS |
| TGCACATATTTCAAAGGCCT+TGG | 0.314739 | tig0017827:-26786 | Msa1362350:intergenic |
| GGAGAATATTTGACAAGTTA+TGG | 0.336159 | tig0017827:+28597 | Msa1362350:CDS |
| TACTACTTATGATATTGATT+TGG | 0.339422 | tig0017827:+27573 | Msa1362350:CDS |
| CTGTACAAACCGTCATGATT+TGG | 0.348424 | tig0017827:-27820 | Msa1362350:intergenic |
| ACTATTTAAAGTGGCCATAC+TGG | 0.349780 | tig0017827:+27444 | Msa1362350:CDS |
| CTTGGAGATACAAAATCTTC+TGG | 0.359835 | tig0017827:+28698 | Msa1362350:CDS |
| AATAGGAGTTCAGAGGCTTC+AGG | 0.361947 | tig0017827:+28647 | Msa1362350:CDS |
| TCCAAGATGAGTTAAGATTA+TGG | 0.362037 | tig0017827:-24017 | Msa1362350:intergenic |
| TTTGTTTCTTTCTGTCTAGT+AGG | 0.364013 | tig0017827:+28935 | Msa1362350:three_prime_UTR |
| CCATCAGATTGAAGTGCATC+AGG | 0.365409 | tig0017827:-24348 | Msa1362350:intergenic |
| TTCCTCGTCTCCATTTATTA+GGG | 0.365614 | tig0017827:-28420 | Msa1362350:intergenic |
| CGTTGCAGAGAAAGTGTGTT+TGG | 0.370622 | tig0017827:+23907 | Msa1362350:five_prime_UTR |
| GCTGTTCATCAATTCTTCTC+TGG | 0.372100 | tig0017827:-27485 | Msa1362350:intergenic |
| AAAATGAAGTTTATGAAGTT+GGG | 0.381879 | tig0017827:+24318 | Msa1362350:exon |
| ACCATAATCTTAACTCATCT+TGG | 0.388470 | tig0017827:+24016 | Msa1362350:five_prime_UTR |
| ATGACAGAGGATATTGATAA+AGG | 0.389164 | tig0017827:+26887 | Msa1362350:CDS |
| GCCTGATTCTGTTGATGCAT+TGG | 0.391893 | tig0017827:+27318 | Msa1362350:CDS |
| ACCAATGCATCAACAGAATC+AGG | 0.394719 | tig0017827:-27319 | Msa1362350:intergenic |
| AATCTGATGGCAAATTTGTC+AGG | 0.409140 | tig0017827:+24361 | Msa1362350:CDS |
| TTGTTTCTTTCTGTCTAGTA+GGG | 0.411085 | tig0017827:+28936 | Msa1362350:three_prime_UTR |
| GTTTCGTAAGAGTGTGAGAT+TGG | 0.412767 | tig0017827:+28517 | Msa1362350:CDS |
| CTGAGGATCTAAAGATAATT+GGG | 0.417356 | tig0017827:+27014 | Msa1362350:CDS |
| TGATTTGGTCTAGCAAAATC+TGG | 0.421555 | tig0017827:-27805 | Msa1362350:intergenic |
| TTATGGAATGTTGGTAGTAA+AGG | 0.422184 | tig0017827:+28614 | Msa1362350:CDS |
| ACAGATATTATCATAGCTAT+TGG | 0.425143 | tig0017827:+26552 | Msa1362350:CDS |
| TATGGAATGTTGGTAGTAAA+GGG | 0.426699 | tig0017827:+28615 | Msa1362350:CDS |
| TAAGACCAAGTGATGTTTGC+CGG | 0.434445 | tig0017827:-27076 | Msa1362350:intergenic |
| TTCTTCTCTGGATGATTCAT+CGG | 0.435084 | tig0017827:-27473 | Msa1362350:intergenic |
| CATCAAGTATCTTTCGTAGC+TGG | 0.435226 | tig0017827:+26942 | Msa1362350:CDS |
| ATCTTAACTCATCTTGGACT+TGG | 0.439734 | tig0017827:+24022 | Msa1362350:five_prime_UTR |
| GATGAGTTAAGATTATGGTT+GGG | 0.442387 | tig0017827:-24012 | Msa1362350:intergenic |
| CGAGGAATGCGAGAAAACTC+TGG | 0.444156 | tig0017827:+28436 | Msa1362350:CDS |
| GCACATATTTCAAAGGCCTT+GGG | 0.445735 | tig0017827:-26785 | Msa1362350:intergenic |
| TAATTCAGATGAAATTTACT+TGG | 0.448094 | tig0017827:+26745 | Msa1362350:CDS |
| ACGACTTGTTTGTCTGTTGA+GGG | 0.448196 | tig0017827:-28474 | Msa1362350:intergenic |
| AAAAGAGAGAAAACGTGTTA+AGG | 0.451185 | tig0017827:-24154 | Msa1362350:intergenic |
| TTCATCGGCTTCAACCAGTA+TGG | 0.453351 | tig0017827:-27458 | Msa1362350:intergenic |
| GCATGCAGTTGTTGCCGTCT+CGG | 0.453505 | tig0017827:+28570 | Msa1362350:CDS |
| AAGTTGGTTGATAGTTATCT+TGG | 0.460673 | tig0017827:+27721 | Msa1362350:CDS |
| CTTGCTGAAACTATTTAAAG+TGG | 0.463625 | tig0017827:+27435 | Msa1362350:CDS |
| TCCGAAGGATTGGTGGGTTG+AGG | 0.463763 | tig0017827:+27177 | Msa1362350:CDS |
| AAAAGACATTCTATCTCTTA+GGG | 0.466446 | tig0017827:+28737 | Msa1362350:CDS |
| TTTGACAAGTTATGGAATGT+TGG | 0.466928 | tig0017827:+28605 | Msa1362350:CDS |
| TCCTCAACCCACCAATCCTT+CGG | 0.471360 | tig0017827:-27178 | Msa1362350:intergenic |
| TACGAAAGATACTTGATGTA+AGG | 0.472293 | tig0017827:-26937 | Msa1362350:intergenic |
| AACGACTTGTTTGTCTGTTG+AGG | 0.472812 | tig0017827:-28475 | Msa1362350:intergenic |
| ATAGGAGTTCAGAGGCTTCA+GGG | 0.474284 | tig0017827:+28648 | Msa1362350:CDS |
| GTTAGCAAATGCTCGGGCAC+TGG | 0.475056 | tig0017827:-28375 | Msa1362350:intergenic |
| TTGAGTCTGTTCCGAAGGAT+TGG | 0.477314 | tig0017827:+27167 | Msa1362350:CDS |
| CTGCTAAATCTCTTCTCCCT+TGG | 0.477644 | tig0017827:+26990 | Msa1362350:CDS |
| GTAAAGGGCATGGAGAGAAT+AGG | 0.477954 | tig0017827:+28630 | Msa1362350:CDS |
| TGTTTATTGCCGTGTGATAA+CGG | 0.480390 | tig0017827:+27391 | Msa1362350:CDS |
| GAGCAATCGCTTACAGAAGT+TGG | 0.481628 | tig0017827:+26703 | Msa1362350:CDS |
| TCAAAGGCCTTGGGTCCACC+AGG | 0.488895 | tig0017827:-26776 | Msa1362350:intergenic |
| AGTCCAACTTCTGTAGTCCT+TGG | 0.489120 | tig0017827:+28680 | Msa1362350:CDS |
| TTATAAACGCGTAATGATAA+CGG | 0.489211 | tig0017827:+27225 | Msa1362350:CDS |
| TGCATGGAGGAACAAATCTC+TGG | 0.493898 | tig0017827:+27354 | Msa1362350:CDS |
| TGAAAACCTATGCTGTTAGA+TGG | 0.494881 | tig0017827:+27293 | Msa1362350:CDS |
| ATGAGTTAAGATTATGGTTG+GGG | 0.496428 | tig0017827:-24011 | Msa1362350:intergenic |
| AAAACGTGTTAAGGAAAGGA+AGG | 0.498250 | tig0017827:-24145 | Msa1362350:intergenic |
| ATTTACTTGGACGATTTCCC+TGG | 0.500638 | tig0017827:+26758 | Msa1362350:CDS |
| AGATGAGTTAAGATTATGGT+TGG | 0.502698 | tig0017827:-24013 | Msa1362350:intergenic |
| AGAATGGACGGTGTTGTGAT+TGG | 0.502763 | tig0017827:+27262 | Msa1362350:CDS |
| TGATTCCGGCTAGGTCTCCT+GGG | 0.505713 | tig0017827:+27548 | Msa1362350:CDS |
| GAAATTGACTGCTGATGCAT+CGG | 0.507619 | tig0017827:+28274 | Msa1362350:CDS |
| AGCCATCGATATCTACTTGA+AGG | 0.509362 | tig0017827:+27843 | Msa1362350:CDS |
| TCTCCAAGGACTACAGAAGT+TGG | 0.509793 | tig0017827:-28683 | Msa1362350:intergenic |
| AAACTAGAGAGGCTAAGATT+AGG | 0.511940 | tig0017827:-27760 | Msa1362350:intergenic |
| AGTCTGTTCCGAAGGATTGG+TGG | 0.513817 | tig0017827:+27170 | Msa1362350:CDS |
| ATCTTTAGATCCTCAGACCA+AGG | 0.516375 | tig0017827:-27007 | Msa1362350:intergenic |
| TCCACTTCGAGTTGTAGTGC+AGG | 0.516877 | tig0017827:+28322 | Msa1362350:CDS |
| TGGTTTCTGATGCTCATGCA+TGG | 0.521841 | tig0017827:+27338 | Msa1362350:CDS |
| TTGTTTGTCTGTTGAGGGAA+TGG | 0.522335 | tig0017827:-28469 | Msa1362350:intergenic |
| AGAGAAAACGTGTTAAGGAA+AGG | 0.523073 | tig0017827:-24149 | Msa1362350:intergenic |
| GGTGAAATCTAAGGGAAGAA+TGG | 0.523387 | tig0017827:+27246 | Msa1362350:CDS |
| AATTAATGTGAAGTGTAAAG+TGG | 0.523581 | tig0017827:+28801 | Msa1362350:three_prime_UTR |
| CTTACAGAAGTTGGTGTCAA+AGG | 0.524081 | tig0017827:+26712 | Msa1362350:CDS |
| TTGATCCGGCAAACATCACT+TGG | 0.527188 | tig0017827:+27071 | Msa1362350:CDS |
| CGATTTCCCTGGTGGACCCA+AGG | 0.529641 | tig0017827:+26769 | Msa1362350:CDS |
| ATCTCTTCTCCCTTGGTCTG+AGG | 0.535395 | tig0017827:+26997 | Msa1362350:CDS |
| AGTTGTTGCCGTCTCGGTCG+AGG | 0.536571 | tig0017827:+28576 | Msa1362350:CDS |
| TTGCCGTGTGATAACGGTGT+TGG | 0.537879 | tig0017827:+27397 | Msa1362350:CDS |
| ACCTGCACTACAACTCGAAG+TGG | 0.539338 | tig0017827:-28323 | Msa1362350:intergenic |
| CCTGATGCACTTCAATCTGA+TGG | 0.542206 | tig0017827:+24348 | Msa1362350:CDS |
| GAACTTTGCACATATTTCAA+AGG | 0.543529 | tig0017827:-26792 | Msa1362350:intergenic |
| ATATGTGCAAAGTTCTGCTA+TGG | 0.544022 | tig0017827:+26800 | Msa1362350:CDS |
| ATGCAGTTAATAATGTTAGT+TGG | 0.546007 | tig0017827:-24116 | Msa1362350:intergenic |
| TCTGAAAAGAAGAACATATG+TGG | 0.548360 | tig0017827:+28236 | Msa1362350:CDS |
| GATTGCTCTTTGACAGTAGA+GGG | 0.548395 | tig0017827:-26688 | Msa1362350:intergenic |
| TACTTGGACGATTTCCCTGG+TGG | 0.549505 | tig0017827:+26761 | Msa1362350:CDS |
| ACCCACGTTTGTTGTGAAGT+AGG | 0.550474 | tig0017827:-24236 | Msa1362350:intergenic |
| GAAAATTGAGTCTGTTCCGA+AGG | 0.556432 | tig0017827:+27162 | Msa1362350:CDS |
| GATATTGAATCTCGGCAAGT+TGG | 0.559092 | tig0017827:+27705 | Msa1362350:CDS |
| ATGATAACGGTGAAATCTAA+GGG | 0.563530 | tig0017827:+27238 | Msa1362350:CDS |
| GTCTGTTCCGAAGGATTGGT+GGG | 0.564671 | tig0017827:+27171 | Msa1362350:CDS |
| AAGTGAAGAAGAGAGAGTAA+TGG | 0.564864 | tig0017827:-24067 | Msa1362350:intergenic |
| TCTCCATTTATTAGGGCATG+TGG | 0.566345 | tig0017827:-28413 | Msa1362350:intergenic |
| GGTTGAGGATATATGTGAGC+TGG | 0.567054 | tig0017827:+27192 | Msa1362350:CDS |
| CAATATCCTCTGTCATCTCA+AGG | 0.567324 | tig0017827:-26880 | Msa1362350:intergenic |
| ATTGCATGAAGCTTCTGTCA+AGG | 0.573895 | tig0017827:+27519 | Msa1362350:CDS |
| AGGATTTACTGATTCCGGCT+AGG | 0.574506 | tig0017827:+27539 | Msa1362350:CDS |
| AAGTATCTTTCGTAGCTGGA+AGG | 0.582873 | tig0017827:+26946 | Msa1362350:CDS |
| GTGGACTGTTAGCAAATGCT+CGG | 0.585051 | tig0017827:-28382 | Msa1362350:intergenic |
| AATATTCTCCTCGACCGAGA+CGG | 0.585861 | tig0017827:-28584 | Msa1362350:intergenic |
| TAGTTTCAGCAAGAAACTAC+AGG | 0.589035 | tig0017827:-27425 | Msa1362350:intergenic |
| AAGTAAGTGTGAGATAGTTG+AGG | 0.589047 | tig0017827:-24202 | Msa1362350:intergenic |
| CGATTGCTCTTTGACAGTAG+AGG | 0.595990 | tig0017827:-26689 | Msa1362350:intergenic |
| GAGGAATGCGAGAAAACTCT+GGG | 0.599575 | tig0017827:+28437 | Msa1362350:CDS |
| TCTTTAGATCCTCAGACCAA+GGG | 0.600214 | tig0017827:-27006 | Msa1362350:intergenic |
| GTAATCCCAGGAGACCTAGC+CGG | 0.600747 | tig0017827:-27553 | Msa1362350:intergenic |
| CCATTTATTAGGGCATGTGG+AGG | 0.601063 | tig0017827:-28410 | Msa1362350:intergenic |
| TCTGAATGCTTACAATGTTG+TGG | 0.606892 | tig0017827:+26835 | Msa1362350:CDS |
| TGGACTGTTAGCAAATGCTC+GGG | 0.608053 | tig0017827:-28381 | Msa1362350:intergenic |
| AATGTTGGTAGTAAAGGGCA+TGG | 0.608411 | tig0017827:+28620 | Msa1362350:CDS |
| CTCAAAAGAGTGAATGAGAG+AGG | 0.609313 | tig0017827:-23981 | Msa1362350:intergenic |
| GTCCTACTTCACAACAAACG+TGG | 0.610602 | tig0017827:+24234 | Msa1362350:five_prime_UTR |
| AATAGGGCGATATTGAATCT+CGG | 0.610706 | tig0017827:+27697 | Msa1362350:CDS |
| TACCTTCAAGTAGATATCGA+TGG | 0.617470 | tig0017827:-27845 | Msa1362350:intergenic |
| ATATCATAAGTAGTAATCCC+AGG | 0.618972 | tig0017827:-27565 | Msa1362350:intergenic |
| AGGCAACCATCTAACAGCAT+AGG | 0.619442 | tig0017827:-27299 | Msa1362350:intergenic |
| ACAAATCAACAAAACTAGAG+AGG | 0.619836 | tig0017827:-27771 | Msa1362350:intergenic |
| TGGAGAGAATAGGAGTTCAG+AGG | 0.626635 | tig0017827:+28640 | Msa1362350:CDS |
| CAACCAACACCGTTATCACA+CGG | 0.627146 | tig0017827:-27400 | Msa1362350:intergenic |
| TTTGCTAGACCAAATCATGA+CGG | 0.635280 | tig0017827:+27811 | Msa1362350:CDS |
| AAATCTAAGGGAAGAATGGA+CGG | 0.638803 | tig0017827:+27250 | Msa1362350:CDS |
| AATGTGAAGTGTAAAGTGGT+AGG | 0.643484 | tig0017827:+28805 | Msa1362350:three_prime_UTR |
| TGTGGCTGCTCGATGTGCAG+CGG | 0.654801 | tig0017827:+26853 | Msa1362350:CDS |
| ACAGGTCGATAAAGTCGTTG+AGG | 0.658797 | tig0017827:+27120 | Msa1362350:CDS |
| AGGGCATGTGGAGGATTGTG+TGG | 0.662550 | tig0017827:-28401 | Msa1362350:intergenic |
| TCCTACTTCACAACAAACGT+GGG | 0.675999 | tig0017827:+24235 | Msa1362350:five_prime_UTR |
| TGTAAAGTTTGACCTTCACA+AGG | 0.678188 | tig0017827:+26578 | Msa1362350:CDS |
| TGCCCTAATAAATGGAGACG+AGG | 0.682274 | tig0017827:+28418 | Msa1362350:CDS |
| CAAAGGCCTTGGGTCCACCA+GGG | 0.683009 | tig0017827:-26775 | Msa1362350:intergenic |
| TGAGAGAGGTCTATTCTCTG+TGG | 0.687989 | tig0017827:-23967 | Msa1362350:intergenic |
| GGACGGTGTTGTGATTGGTG+AGG | 0.691521 | tig0017827:+27267 | Msa1362350:CDS |
| TTACAACCGAAAATTAACAC+AGG | 0.700722 | tig0017827:+27102 | Msa1362350:CDS |
| GGAGTACCTTGAGATGACAG+AGG | 0.738740 | tig0017827:+26874 | Msa1362350:CDS |
| TTTCTGATGCTCATGCATGG+AGG | 0.746693 | tig0017827:+27341 | Msa1362350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTATTTCATAAATATTA+TGG | + | tig0017827:25544-25563 | Msa1362350:intron | 10.0% |
| !! | TATTAACATAAAAAAATGAT+TGG | - | tig0017827:25899-25918 | Msa1362350:intergenic | 10.0% |
| !!! | AATATAAACTGAAATAGTTT+TGG | + | tig0017827:24585-24604 | Msa1362350:intron | 15.0% |
| !!! | TATGTTATTTTTAACTGTAA+AGG | + | tig0017827:25225-25244 | Msa1362350:intron | 15.0% |
| !!! | ATGTTATTTTTAACTGTAAA+GGG | + | tig0017827:25226-25245 | Msa1362350:intron | 15.0% |
| !! | GTAAAACTAATGATATATAT+AGG | - | tig0017827:25461-25480 | Msa1362350:intergenic | 15.0% |
| !! | TATTTCATAAATATTATGGT+TGG | + | tig0017827:25548-25567 | Msa1362350:intron | 15.0% |
| !!! | CTTGATTTTTAAACTTAATT+TGG | - | tig0017827:25664-25683 | Msa1362350:intergenic | 15.0% |
| !! | AATTAAGTTTAAAAATCAAG+AGG | + | tig0017827:25664-25683 | Msa1362350:intron | 15.0% |
| !! | ATTAAGTTTAAAAATCAAGA+GGG | + | tig0017827:25665-25684 | Msa1362350:intron | 15.0% |
| !! | TTAATATCAACAATTATTAG+TGG | - | tig0017827:25758-25777 | Msa1362350:intergenic | 15.0% |
| !!! | TGCAACTATTTTATTAAATA+AGG | - | tig0017827:25954-25973 | Msa1362350:intergenic | 15.0% |
| !!! | AGTTTTATTAAAAAATGCAA+TGG | + | tig0017827:26266-26285 | Msa1362350:intron | 15.0% |
| !! | ATGTAATGTAATTTGAATTA+AGG | + | tig0017827:28856-28875 | Msa1362350:three_prime_UTR | 15.0% |
| !! | AAAAATGAAGTTTATGAAGT+TGG | + | tig0017827:24317-24336 | Msa1362350:exon | 20.0% |
| !! | AAAATGAAGTTTATGAAGTT+GGG | + | tig0017827:24318-24337 | Msa1362350:exon | 20.0% |
| !!! | AATGTTTTAAAAACCAAACA+TGG | + | tig0017827:24770-24789 | Msa1362350:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | tig0017827:25021-25040 | Msa1362350:intron | 20.0% |
| !! | ATATATTGAAACTATTTCAG+TGG | - | tig0017827:25175-25194 | Msa1362350:intergenic | 20.0% |
| !! | GTAGTGTACTATTAAATTAT+TGG | + | tig0017827:25627-25646 | Msa1362350:intron | 20.0% |
| !!! | GATTTTTAAACTTAATTTGG+AGG | - | tig0017827:25661-25680 | Msa1362350:intergenic | 20.0% |
| !!! | ACTTTAAAAAGCTAGTATTT+TGG | + | tig0017827:25787-25806 | Msa1362350:intron | 20.0% |
| !!! | TATTACATTTTTCTATCACT+AGG | - | tig0017827:26247-26266 | Msa1362350:intergenic | 20.0% |
| !! | TAATTCAGATGAAATTTACT+TGG | + | tig0017827:26745-26764 | Msa1362350:CDS | 20.0% |
| !!! | TACTACTTATGATATTGATT+TGG | + | tig0017827:27573-27592 | Msa1362350:CDS | 20.0% |
| !!! | GATATGAAAGATAAAGTATT+TGG | + | tig0017827:27658-27677 | Msa1362350:CDS | 20.0% |
| !!! | TATTTGGTGAATCTATTTTA+GGG | + | tig0017827:27674-27693 | Msa1362350:CDS | 20.0% |
| !!! | TTATTTTCTCGAATTATTTC+AGG | - | tig0017827:27978-27997 | Msa1362350:intergenic | 20.0% |
| ! | ATGCAGTTAATAATGTTAGT+TGG | - | tig0017827:24119-24138 | Msa1362350:intergenic | 25.0% |
| ! | CTAAAGAAACAAGAAAGTAA+AGG | - | tig0017827:24448-24467 | Msa1362350:intergenic | 25.0% |
| !! | TTTTTCTTTTTCTGTACTGT+TGG | + | tig0017827:24495-24514 | Msa1362350:intron | 25.0% |
| ! | GCAACATAAAAAGATTCAAA+CGG | - | tig0017827:24635-24654 | Msa1362350:intergenic | 25.0% |
| !! | TTTGTTATGACAGTAAATCA+CGG | + | tig0017827:24658-24677 | Msa1362350:intron | 25.0% |
| !! | AGTTTCTGGAAAATAAATCA+CGG | - | tig0017827:24691-24710 | Msa1362350:intergenic | 25.0% |
| !!! | TTTATTTTCCAGAAACTTTG+AGG | + | tig0017827:24694-24713 | Msa1362350:intron | 25.0% |
| ! | ACATTGCTTTGTATATGTTT+CGG | - | tig0017827:24755-24774 | Msa1362350:intergenic | 25.0% |
| ! | TGAGAAAATCAAGTAATTCA+AGG | - | tig0017827:25012-25031 | Msa1362350:intergenic | 25.0% |
| ! | TTGCATACAATGAGTTAAAT+GGG | - | tig0017827:25148-25167 | Msa1362350:intergenic | 25.0% |
| ! | TTTGCATACAATGAGTTAAA+TGG | - | tig0017827:25149-25168 | Msa1362350:intergenic | 25.0% |
| !!! | ATAGTTTGCAAAGTCTTTTA+TGG | + | tig0017827:25384-25403 | Msa1362350:intron | 25.0% |
| ! | AAATAGTTGCAAGTATATGA+TGG | + | tig0017827:25963-25982 | Msa1362350:intron | 25.0% |
| ! | TAACTTATACAAGGAAAGAT+GGG | - | tig0017827:26471-26490 | Msa1362350:intergenic | 25.0% |
| ! | TACAAAGTGTAACTTATACA+AGG | - | tig0017827:26480-26499 | Msa1362350:intergenic | 25.0% |
| ! | AATTCATTTCCAATTTATGC+AGG | + | tig0017827:26508-26527 | Msa1362350:intron | 25.0% |
| ! | ACAGATATTATCATAGCTAT+TGG | + | tig0017827:26552-26571 | Msa1362350:CDS | 25.0% |
| ! | TTTAACAGGAAACTAATACA+AGG | - | tig0017827:26622-26641 | Msa1362350:intergenic | 25.0% |
| ! | AGAAGAATTGCTTATTTAAC+AGG | - | tig0017827:26636-26655 | Msa1362350:intergenic | 25.0% |
| ! | TTATAAACGCGTAATGATAA+CGG | + | tig0017827:27225-27244 | Msa1362350:CDS | 25.0% |
| !!! | GTATTTGGTGAATCTATTTT+AGG | + | tig0017827:27673-27692 | Msa1362350:CDS | 25.0% |
| !!! | TGAATCTATTTTAGGGAATA+GGG | + | tig0017827:27681-27700 | Msa1362350:CDS | 25.0% |
| !! | TATTTTGTTAGTGTCATGTT+AGG | - | tig0017827:27952-27971 | Msa1362350:intergenic | 25.0% |
| !!! | TGTTCTAAAATGTGATATAC+TGG | - | tig0017827:28107-28126 | Msa1362350:intergenic | 25.0% |
| ! | TATTAAGACAAAGAACAGAT+TGG | - | tig0017827:28152-28171 | Msa1362350:intergenic | 25.0% |
| !! | TTTCAGATTTTGTCAAACTT+GGG | - | tig0017827:28223-28242 | Msa1362350:intergenic | 25.0% |
| !! | TTTTCAGATTTTGTCAAACT+TGG | - | tig0017827:28224-28243 | Msa1362350:intergenic | 25.0% |
| ! | AAAAGACATTCTATCTCTTA+GGG | + | tig0017827:28737-28756 | Msa1362350:CDS | 25.0% |
| ! | GGGAATTACATAGAATTAAT+TGG | + | tig0017827:28757-28776 | Msa1362350:exon | 25.0% |
| ! | AATTAATGTGAAGTGTAAAG+TGG | + | tig0017827:28801-28820 | Msa1362350:three_prime_UTR | 25.0% |
| ATGAGTTAAGATTATGGTTG+GGG | - | tig0017827:24014-24033 | Msa1362350:intergenic | 30.0% | |
| GATGAGTTAAGATTATGGTT+GGG | - | tig0017827:24015-24034 | Msa1362350:intergenic | 30.0% | |
| AGATGAGTTAAGATTATGGT+TGG | - | tig0017827:24016-24035 | Msa1362350:intergenic | 30.0% | |
| ACCATAATCTTAACTCATCT+TGG | + | tig0017827:24016-24035 | Msa1362350:five_prime_UTR | 30.0% | |
| TCCAAGATGAGTTAAGATTA+TGG | - | tig0017827:24020-24039 | Msa1362350:intergenic | 30.0% | |
| !!! | GACTTGGTTTTAAGCAAATA+AGG | + | tig0017827:24038-24057 | Msa1362350:five_prime_UTR | 30.0% |
| !!! | TTGGTTTTAAGCAAATAAGG+CGG | + | tig0017827:24041-24060 | Msa1362350:five_prime_UTR | 30.0% |
| AAAAGAGAGAAAACGTGTTA+AGG | - | tig0017827:24157-24176 | Msa1362350:intergenic | 30.0% | |
| AAGTTTGTGACAAAAACACA+AGG | - | tig0017827:24265-24284 | Msa1362350:intergenic | 30.0% | |
| TGTCACAAACTTTCTTTGTT+TGG | + | tig0017827:24273-24292 | Msa1362350:intron | 30.0% | |
| !!! | ACTGAAATAGTTTTGGTGTT+TGG | + | tig0017827:24592-24611 | Msa1362350:intron | 30.0% |
| AAAAAGATTCAAACGGTTAC+TGG | - | tig0017827:24628-24647 | Msa1362350:intergenic | 30.0% | |
| CAATAAGTTTGTGAGAATCA+AGG | - | tig0017827:24727-24746 | Msa1362350:intergenic | 30.0% | |
| ! | GTGATTTTGCAAAAGCTATA+AGG | + | tig0017827:24829-24848 | Msa1362350:intron | 30.0% |
| ! | TGTAGCACATGATTTTTAAC+AGG | - | tig0017827:25584-25603 | Msa1362350:intergenic | 30.0% |
| ! | ATTTGATCAAGTTTTGCGTT+TGG | + | tig0017827:26110-26129 | Msa1362350:intron | 30.0% |
| GAATCAAACTCAATACTTCA+GGG | - | tig0017827:26225-26244 | Msa1362350:intergenic | 30.0% | |
| ! | ACATGCATCTTAATACCTTT+TGG | + | tig0017827:26332-26351 | Msa1362350:intron | 30.0% |
| AACTTATACAAGGAAAGATG+GGG | - | tig0017827:26470-26489 | Msa1362350:intergenic | 30.0% | |
| GTAACTTATACAAGGAAAGA+TGG | - | tig0017827:26472-26491 | Msa1362350:intergenic | 30.0% | |
| TGATATGTACCTGCATAAAT+TGG | - | tig0017827:26520-26539 | Msa1362350:intergenic | 30.0% | |
| GAACTTTGCACATATTTCAA+AGG | - | tig0017827:26795-26814 | Msa1362350:intergenic | 30.0% | |
| ATGACAGAGGATATTGATAA+AGG | + | tig0017827:26887-26906 | Msa1362350:CDS | 30.0% | |
| TACGAAAGATACTTGATGTA+AGG | - | tig0017827:26940-26959 | Msa1362350:intergenic | 30.0% | |
| TCTGAGGATCTAAAGATAAT+TGG | + | tig0017827:27013-27032 | Msa1362350:CDS | 30.0% | |
| CTGAGGATCTAAAGATAATT+GGG | + | tig0017827:27014-27033 | Msa1362350:CDS | 30.0% | |
| ! | AACAGAAGTTTTTGATGCTA+TGG | - | tig0017827:27053-27072 | Msa1362350:intergenic | 30.0% |
| ATCAAAAACTTCTGTTGATC+CGG | + | tig0017827:27057-27076 | Msa1362350:CDS | 30.0% | |
| TTACAACCGAAAATTAACAC+AGG | + | tig0017827:27102-27121 | Msa1362350:CDS | 30.0% | |
| ! | TATCGACCTGTGTTAATTTT+CGG | - | tig0017827:27111-27130 | Msa1362350:intergenic | 30.0% |
| !! | AATGATAACGGTGAAATCTA+AGG | + | tig0017827:27237-27256 | Msa1362350:CDS | 30.0% |
| !! | ATGATAACGGTGAAATCTAA+GGG | + | tig0017827:27238-27257 | Msa1362350:CDS | 30.0% |
| CTTGCTGAAACTATTTAAAG+TGG | + | tig0017827:27435-27454 | Msa1362350:CDS | 30.0% | |
| ATATCATAAGTAGTAATCCC+AGG | - | tig0017827:27568-27587 | Msa1362350:intergenic | 30.0% | |
| ! | AAAGAAAAAGCGTGATATTG+AGG | + | tig0017827:27630-27649 | Msa1362350:CDS | 30.0% |
| !! | GTGAATCTATTTTAGGGAAT+AGG | + | tig0017827:27680-27699 | Msa1362350:CDS | 30.0% |
| !! | AAGTTGGTTGATAGTTATCT+TGG | + | tig0017827:27721-27740 | Msa1362350:CDS | 30.0% |
| ACAAATCAACAAAACTAGAG+AGG | - | tig0017827:27774-27793 | Msa1362350:intergenic | 30.0% | |
| !!! | ATTTTTTGTCTGTGAAGCAT+TGG | + | tig0017827:27912-27931 | Msa1362350:intron | 30.0% |
| TCTGAAAAGAAGAACATATG+TGG | + | tig0017827:28236-28255 | Msa1362350:CDS | 30.0% | |
| GGAGAATATTTGACAAGTTA+TGG | + | tig0017827:28597-28616 | Msa1362350:CDS | 30.0% | |
| TTTGACAAGTTATGGAATGT+TGG | + | tig0017827:28605-28624 | Msa1362350:CDS | 30.0% | |
| !! | TTATGGAATGTTGGTAGTAA+AGG | + | tig0017827:28614-28633 | Msa1362350:CDS | 30.0% |
| !! | TATGGAATGTTGGTAGTAAA+GGG | + | tig0017827:28615-28634 | Msa1362350:CDS | 30.0% |
| ! | AGAATGTCTTTTGTGTCTTA+AGG | - | tig0017827:28729-28748 | Msa1362350:intergenic | 30.0% |
| CAAAAGACATTCTATCTCTT+AGG | + | tig0017827:28736-28755 | Msa1362350:CDS | 30.0% | |
| ! | TTTGTTTCTTTCTGTCTAGT+AGG | + | tig0017827:28935-28954 | Msa1362350:three_prime_UTR | 30.0% |
| ATCTTAACTCATCTTGGACT+TGG | + | tig0017827:24022-24041 | Msa1362350:five_prime_UTR | 35.0% | |
| AAGTGAAGAAGAGAGAGTAA+TGG | - | tig0017827:24070-24089 | Msa1362350:intergenic | 35.0% | |
| AAAACGTGTTAAGGAAAGGA+AGG | - | tig0017827:24148-24167 | Msa1362350:intergenic | 35.0% | |
| AGAGAAAACGTGTTAAGGAA+AGG | - | tig0017827:24152-24171 | Msa1362350:intergenic | 35.0% | |
| AAGTAAGTGTGAGATAGTTG+AGG | - | tig0017827:24205-24224 | Msa1362350:intergenic | 35.0% | |
| AATCTGATGGCAAATTTGTC+AGG | + | tig0017827:24361-24380 | Msa1362350:CDS | 35.0% | |
| !! | ATTTTCCAGAAACTTTGAGG+TGG | + | tig0017827:24697-24716 | Msa1362350:intron | 35.0% |
| ! | AGGTAATTATGTGTCGATGT+TGG | - | tig0017827:24992-25011 | Msa1362350:intergenic | 35.0% |
| TCTCAAATTATTAGCGGTGT+CGG | + | tig0017827:25027-25046 | Msa1362350:intron | 35.0% | |
| AAGATGCCAGCTATGAAATA+CGG | - | tig0017827:25082-25101 | Msa1362350:intergenic | 35.0% | |
| ! | GTTAAATGGGTTTCTCTTGA+AGG | - | tig0017827:25135-25154 | Msa1362350:intergenic | 35.0% |
| AGAGAGGTAGGTTTAATTGA+AGG | + | tig0017827:25265-25284 | Msa1362350:intron | 35.0% | |
| ACCAGAAACTCACAATTTGA+AGG | - | tig0017827:25299-25318 | Msa1362350:intergenic | 35.0% | |
| TCCAAACAGTGTGTATGTAT+AGG | + | tig0017827:25330-25349 | Msa1362350:intron | 35.0% | |
| ACCTATACATACACACTGTT+TGG | - | tig0017827:25334-25353 | Msa1362350:intergenic | 35.0% | |
| AAACAGTGTGTATGTATAGG+TGG | + | tig0017827:25333-25352 | Msa1362350:intron | 35.0% | |
| ! | TTTTAGCATGTGAGTTTCAC+TGG | + | tig0017827:25482-25501 | Msa1362350:intron | 35.0% |
| CTACACATGTATTCCACATT+TGG | + | tig0017827:25599-25618 | Msa1362350:intron | 35.0% | |
| AGACATGCTTAACAAAGCAT+TGG | - | tig0017827:25704-25723 | Msa1362350:intergenic | 35.0% | |
| !!! | TGCAGTTAGCCATTTTTGTA+GGG | + | tig0017827:25817-25836 | Msa1362350:intron | 35.0% |
| ATTTGCAGACCCTACAAAAA+TGG | - | tig0017827:25829-25848 | Msa1362350:intergenic | 35.0% | |
| TACACTAATAGTTTACCACC+AGG | + | tig0017827:26157-26176 | Msa1362350:intron | 35.0% | |
| ACACTAATAGTTTACCACCA+GGG | + | tig0017827:26158-26177 | Msa1362350:intron | 35.0% | |
| GGAATCAAACTCAATACTTC+AGG | - | tig0017827:26226-26245 | Msa1362350:intergenic | 35.0% | |
| ! | TGTTTTTCACCACATTCACA+TGG | - | tig0017827:26315-26334 | Msa1362350:intergenic | 35.0% |
| TGTAAAGTTTGACCTTCACA+AGG | + | tig0017827:26578-26597 | Msa1362350:CDS | 35.0% | |
| ! | AAAAAGTACACACCTTGTGA+AGG | - | tig0017827:26593-26612 | Msa1362350:intergenic | 35.0% |
| ATATGTGCAAAGTTCTGCTA+TGG | + | tig0017827:26800-26819 | Msa1362350:CDS | 35.0% | |
| TCTGAATGCTTACAATGTTG+TGG | + | tig0017827:26835-26854 | Msa1362350:CDS | 35.0% | |
| AAATCTAAGGGAAGAATGGA+CGG | + | tig0017827:27250-27269 | Msa1362350:CDS | 35.0% | |
| TGAAAACCTATGCTGTTAGA+TGG | + | tig0017827:27293-27312 | Msa1362350:CDS | 35.0% | |
| TGTTTATTGCCGTGTGATAA+CGG | + | tig0017827:27391-27410 | Msa1362350:CDS | 35.0% | |
| TAGTTTCAGCAAGAAACTAC+AGG | - | tig0017827:27428-27447 | Msa1362350:intergenic | 35.0% | |
| ! | ACTATTTAAAGTGGCCATAC+TGG | + | tig0017827:27444-27463 | Msa1362350:CDS | 35.0% |
| TTCTTCTCTGGATGATTCAT+CGG | - | tig0017827:27476-27495 | Msa1362350:intergenic | 35.0% | |
| !! | TGTCAAGGATTTACTGATTC+CGG | + | tig0017827:27534-27553 | Msa1362350:CDS | 35.0% |
| AATAGGGCGATATTGAATCT+CGG | + | tig0017827:27697-27716 | Msa1362350:CDS | 35.0% | |
| AAACTAGAGAGGCTAAGATT+AGG | - | tig0017827:27763-27782 | Msa1362350:intergenic | 35.0% | |
| !! | TGATTTGGTCTAGCAAAATC+TGG | - | tig0017827:27808-27827 | Msa1362350:intergenic | 35.0% |
| TTTGCTAGACCAAATCATGA+CGG | + | tig0017827:27811-27830 | Msa1362350:CDS | 35.0% | |
| TACCTTCAAGTAGATATCGA+TGG | - | tig0017827:27848-27867 | Msa1362350:intergenic | 35.0% | |
| ! | AAGGTAAGATTTTGCTACCT+TGG | + | tig0017827:27862-27881 | Msa1362350:intron | 35.0% |
| ! | CATTTGCGTGAATCATTTTC+AGG | + | tig0017827:28193-28212 | Msa1362350:intron | 35.0% |
| TTCCTCGTCTCCATTTATTA+GGG | - | tig0017827:28423-28442 | Msa1362350:intergenic | 35.0% | |
| ATTCCTCGTCTCCATTTATT+AGG | - | tig0017827:28424-28443 | Msa1362350:intergenic | 35.0% | |
| AGTAGCAAAAATAGCAGAAG+TGG | + | tig0017827:28548-28567 | Msa1362350:CDS | 35.0% | |
| ! | CAGAAGATTTTGTATCTCCA+AGG | - | tig0017827:28700-28719 | Msa1362350:intergenic | 35.0% |
| CTTGGAGATACAAAATCTTC+TGG | + | tig0017827:28698-28717 | Msa1362350:CDS | 35.0% | |
| AATGTGAAGTGTAAAGTGGT+AGG | + | tig0017827:28805-28824 | Msa1362350:three_prime_UTR | 35.0% | |
| CTCAAAAGAGTGAATGAGAG+AGG | - | tig0017827:23984-24003 | Msa1362350:intergenic | 40.0% | |
| TCCTACTTCACAACAAACGT+GGG | + | tig0017827:24235-24254 | Msa1362350:five_prime_UTR | 40.0% | |
| GTAAACCACCTCAAAGTTTC+TGG | - | tig0017827:24705-24724 | Msa1362350:intergenic | 40.0% | |
| ! | GATTAGTCATGTCCCAATGT+CGG | + | tig0017827:24960-24979 | Msa1362350:intron | 40.0% |
| CCAGCTATGAAATACGGATA+CGG | - | tig0017827:25076-25095 | Msa1362350:intergenic | 40.0% | |
| GAGGTAGGTTTAATTGAAGG+TGG | + | tig0017827:25268-25287 | Msa1362350:intron | 40.0% | |
| GAAACTCACAATTTGAAGGC+TGG | - | tig0017827:25295-25314 | Msa1362350:intergenic | 40.0% | |
| GCCTTCAAATTGTGAGTTTC+TGG | + | tig0017827:25295-25314 | Msa1362350:intron | 40.0% | |
| GTGTGTATGTATAGGTGGTA+TGG | + | tig0017827:25338-25357 | Msa1362350:intron | 40.0% | |
| TACACTACACTGACCAAATG+TGG | - | tig0017827:25615-25634 | Msa1362350:intergenic | 40.0% | |
| CTACAAAAATGGCTAACTGC+AGG | - | tig0017827:25818-25837 | Msa1362350:intergenic | 40.0% | |
| !!! | CTGCAGTTAGCCATTTTTGT+AGG | + | tig0017827:25816-25835 | Msa1362350:intron | 40.0% |
| GTGATGTATCCATGTGAATG+TGG | + | tig0017827:26303-26322 | Msa1362350:intron | 40.0% | |
| GCAACTGAAATTCAGCCAAA+AGG | - | tig0017827:26350-26369 | Msa1362350:intergenic | 40.0% | |
| ATTTGCATGCCTACATTGTG+TGG | + | tig0017827:26403-26422 | Msa1362350:intron | 40.0% | |
| TTTGCATGCCTACATTGTGT+GGG | + | tig0017827:26404-26423 | Msa1362350:intron | 40.0% | |
| ACAATTACCCCACACAATGT+AGG | - | tig0017827:26415-26434 | Msa1362350:intergenic | 40.0% | |
| GATTGCTCTTTGACAGTAGA+GGG | - | tig0017827:26691-26710 | Msa1362350:intergenic | 40.0% | |
| !! | CTTACAGAAGTTGGTGTCAA+AGG | + | tig0017827:26712-26731 | Msa1362350:CDS | 40.0% |
| ATTTACTTGGACGATTTCCC+TGG | + | tig0017827:26758-26777 | Msa1362350:CDS | 40.0% | |
| GCACATATTTCAAAGGCCTT+GGG | - | tig0017827:26788-26807 | Msa1362350:intergenic | 40.0% | |
| TGCACATATTTCAAAGGCCT+TGG | - | tig0017827:26789-26808 | Msa1362350:intergenic | 40.0% | |
| CAATATCCTCTGTCATCTCA+AGG | - | tig0017827:26883-26902 | Msa1362350:intergenic | 40.0% | |
| CATCAAGTATCTTTCGTAGC+TGG | + | tig0017827:26942-26961 | Msa1362350:CDS | 40.0% | |
| AAGTATCTTTCGTAGCTGGA+AGG | + | tig0017827:26946-26965 | Msa1362350:CDS | 40.0% | |
| TCTTTAGATCCTCAGACCAA+GGG | - | tig0017827:27009-27028 | Msa1362350:intergenic | 40.0% | |
| ATCTTTAGATCCTCAGACCA+AGG | - | tig0017827:27010-27029 | Msa1362350:intergenic | 40.0% | |
| TAAGACCAAGTGATGTTTGC+CGG | - | tig0017827:27079-27098 | Msa1362350:intergenic | 40.0% | |
| GAAAATTGAGTCTGTTCCGA+AGG | + | tig0017827:27162-27181 | Msa1362350:CDS | 40.0% | |
| GGTGAAATCTAAGGGAAGAA+TGG | + | tig0017827:27246-27265 | Msa1362350:CDS | 40.0% | |
| ACCAATGCATCAACAGAATC+AGG | - | tig0017827:27322-27341 | Msa1362350:intergenic | 40.0% | |
| GCTGTTCATCAATTCTTCTC+TGG | - | tig0017827:27488-27507 | Msa1362350:intergenic | 40.0% | |
| ATTGCATGAAGCTTCTGTCA+AGG | + | tig0017827:27519-27538 | Msa1362350:CDS | 40.0% | |
| GATATTGAATCTCGGCAAGT+TGG | + | tig0017827:27705-27724 | Msa1362350:CDS | 40.0% | |
| CTGTACAAACCGTCATGATT+TGG | - | tig0017827:27823-27842 | Msa1362350:intergenic | 40.0% | |
| AGCCATCGATATCTACTTGA+AGG | + | tig0017827:27843-27862 | Msa1362350:CDS | 40.0% | |
| ! | GTAAGATTTTGCTACCTTGG+AGG | + | tig0017827:27865-27884 | Msa1362350:intron | 40.0% |
| AAGAAGTGAAAACACCTCCA+AGG | - | tig0017827:27882-27901 | Msa1362350:intergenic | 40.0% | |
| ! | ATGTCTTCCACAGAAAGTGT+CGG | + | tig0017827:28025-28044 | Msa1362350:intron | 40.0% |
| ! | TAGTTGTGCAAGCATTGTTC+AGG | - | tig0017827:28084-28103 | Msa1362350:intergenic | 40.0% |
| GAAATTGACTGCTGATGCAT+CGG | + | tig0017827:28274-28293 | Msa1362350:CDS | 40.0% | |
| TCTCCATTTATTAGGGCATG+TGG | - | tig0017827:28416-28435 | Msa1362350:intergenic | 40.0% | |
| TTGTTTGTCTGTTGAGGGAA+TGG | - | tig0017827:28472-28491 | Msa1362350:intergenic | 40.0% | |
| ! | ACGACTTGTTTGTCTGTTGA+GGG | - | tig0017827:28477-28496 | Msa1362350:intergenic | 40.0% |
| ! | AACGACTTGTTTGTCTGTTG+AGG | - | tig0017827:28478-28497 | Msa1362350:intergenic | 40.0% |
| ! | GTTTCGTAAGAGTGTGAGAT+TGG | + | tig0017827:28517-28536 | Msa1362350:CDS | 40.0% |
| !! | AATGTTGGTAGTAAAGGGCA+TGG | + | tig0017827:28620-28639 | Msa1362350:CDS | 40.0% |
| ! | CGTTGCAGAGAAAGTGTGTT+TGG | + | tig0017827:23907-23926 | Msa1362350:five_prime_UTR | 45.0% |
| TGAGAGAGGTCTATTCTCTG+TGG | - | tig0017827:23970-23989 | Msa1362350:intergenic | 45.0% | |
| GTCCTACTTCACAACAAACG+TGG | + | tig0017827:24234-24253 | Msa1362350:five_prime_UTR | 45.0% | |
| !! | ACCCACGTTTGTTGTGAAGT+AGG | - | tig0017827:24239-24258 | Msa1362350:intergenic | 45.0% |
| CCATCAGATTGAAGTGCATC+AGG | - | tig0017827:24351-24370 | Msa1362350:intergenic | 45.0% | |
| CCTGATGCACTTCAATCTGA+TGG | + | tig0017827:24348-24367 | Msa1362350:CDS | 45.0% | |
| GATAGGATGTCTGCTAGGTT+CGG | - | tig0017827:24921-24940 | Msa1362350:intergenic | 45.0% | |
| !! | AGGAGTGTTTGTGCTTCGAT+AGG | - | tig0017827:24938-24957 | Msa1362350:intergenic | 45.0% |
| ATCGAAGCACAAACACTCCT+CGG | + | tig0017827:24938-24957 | Msa1362350:intron | 45.0% | |
| ATTGGGACATGACTAATCCG+AGG | - | tig0017827:24958-24977 | Msa1362350:intergenic | 45.0% | |
| TGAAATACGGATACGGACAC+CGG | - | tig0017827:25069-25088 | Msa1362350:intergenic | 45.0% | |
| CCGTATCCGTATTTCATAGC+TGG | + | tig0017827:25073-25092 | Msa1362350:intron | 45.0% | |
| AGAAAGAGTCTGAGAGAGAG+AGG | + | tig0017827:25249-25268 | Msa1362350:intron | 45.0% | |
| !! | TGAGTTTCTGGTTGAGCTTG+TGG | + | tig0017827:25307-25326 | Msa1362350:intron | 45.0% |
| CAACTACTTTCACTACACCC+TGG | - | tig0017827:26178-26197 | Msa1362350:intergenic | 45.0% | |
| CAGGGTGTAGTGAAAGTAGT+TGG | + | tig0017827:26176-26195 | Msa1362350:intron | 45.0% | |
| TTGCATGCCTACATTGTGTG+GGG | + | tig0017827:26405-26424 | Msa1362350:intron | 45.0% | |
| CGATTGCTCTTTGACAGTAG+AGG | - | tig0017827:26692-26711 | Msa1362350:intergenic | 45.0% | |
| GAGCAATCGCTTACAGAAGT+TGG | + | tig0017827:26703-26722 | Msa1362350:CDS | 45.0% | |
| CTGCTAAATCTCTTCTCCCT+TGG | + | tig0017827:26990-27009 | Msa1362350:CDS | 45.0% | |
| TTGATCCGGCAAACATCACT+TGG | + | tig0017827:27071-27090 | Msa1362350:CDS | 45.0% | |
| ACAGGTCGATAAAGTCGTTG+AGG | + | tig0017827:27120-27139 | Msa1362350:CDS | 45.0% | |
| TTGAGTCTGTTCCGAAGGAT+TGG | + | tig0017827:27167-27186 | Msa1362350:CDS | 45.0% | |
| GGTTGAGGATATATGTGAGC+TGG | + | tig0017827:27192-27211 | Msa1362350:CDS | 45.0% | |
| !! | AGAATGGACGGTGTTGTGAT+TGG | + | tig0017827:27262-27281 | Msa1362350:CDS | 45.0% |
| AGGCAACCATCTAACAGCAT+AGG | - | tig0017827:27302-27321 | Msa1362350:intergenic | 45.0% | |
| GCCTGATTCTGTTGATGCAT+TGG | + | tig0017827:27318-27337 | Msa1362350:CDS | 45.0% | |
| TGGTTTCTGATGCTCATGCA+TGG | + | tig0017827:27338-27357 | Msa1362350:CDS | 45.0% | |
| TTTCTGATGCTCATGCATGG+AGG | + | tig0017827:27341-27360 | Msa1362350:CDS | 45.0% | |
| TGCATGGAGGAACAAATCTC+TGG | + | tig0017827:27354-27373 | Msa1362350:CDS | 45.0% | |
| CAACCAACACCGTTATCACA+CGG | - | tig0017827:27403-27422 | Msa1362350:intergenic | 45.0% | |
| !! | TTCATCGGCTTCAACCAGTA+TGG | - | tig0017827:27461-27480 | Msa1362350:intergenic | 45.0% |
| !! | AGGATTTACTGATTCCGGCT+AGG | + | tig0017827:27539-27558 | Msa1362350:CDS | 45.0% |
| !! | TATAGCACCGACACTTTCTG+TGG | - | tig0017827:28035-28054 | Msa1362350:intergenic | 45.0% |
| CCATTTATTAGGGCATGTGG+AGG | - | tig0017827:28413-28432 | Msa1362350:intergenic | 45.0% | |
| CCTCCACATGCCCTAATAAA+TGG | + | tig0017827:28410-28429 | Msa1362350:CDS | 45.0% | |
| TGCCCTAATAAATGGAGACG+AGG | + | tig0017827:28418-28437 | Msa1362350:CDS | 45.0% | |
| GAGGAATGCGAGAAAACTCT+GGG | + | tig0017827:28437-28456 | Msa1362350:CDS | 45.0% | |
| AATATTCTCCTCGACCGAGA+CGG | - | tig0017827:28587-28606 | Msa1362350:intergenic | 45.0% | |
| ! | GTAAAGGGCATGGAGAGAAT+AGG | + | tig0017827:28630-28649 | Msa1362350:CDS | 45.0% |
| TGGAGAGAATAGGAGTTCAG+AGG | + | tig0017827:28640-28659 | Msa1362350:CDS | 45.0% | |
| AATAGGAGTTCAGAGGCTTC+AGG | + | tig0017827:28647-28666 | Msa1362350:CDS | 45.0% | |
| ATAGGAGTTCAGAGGCTTCA+GGG | + | tig0017827:28648-28667 | Msa1362350:CDS | 45.0% | |
| AGTCCAACTTCTGTAGTCCT+TGG | + | tig0017827:28680-28699 | Msa1362350:CDS | 45.0% | |
| TCTCCAAGGACTACAGAAGT+TGG | - | tig0017827:28686-28705 | Msa1362350:intergenic | 45.0% | |
| ACCAAACATGGTACCGCGTT+AGG | + | tig0017827:24782-24801 | Msa1362350:intron | 50.0% | |
| ACCTAACGCGGTACCATGTT+TGG | - | tig0017827:24786-24805 | Msa1362350:intergenic | 50.0% | |
| GCTTCGATAGGATGTCTGCT+AGG | - | tig0017827:24926-24945 | Msa1362350:intergenic | 50.0% | |
| TGTTGGACACGACCGACATT+GGG | - | tig0017827:24975-24994 | Msa1362350:intergenic | 50.0% | |
| ATGTTGGACACGACCGACAT+TGG | - | tig0017827:24976-24995 | Msa1362350:intergenic | 50.0% | |
| AGAGTCTGAGAGAGAGAGGT+AGG | + | tig0017827:25253-25272 | Msa1362350:intron | 50.0% | |
| CTACTTTCACTACACCCTGG+TGG | - | tig0017827:26175-26194 | Msa1362350:intergenic | 50.0% | |
| ! | GTGAAAGTAGTTGGTGCGCA+TGG | + | tig0017827:26185-26204 | Msa1362350:intron | 50.0% |
| ! | TAGTTGGTGCGCATGGTATG+TGG | + | tig0017827:26192-26211 | Msa1362350:intron | 50.0% |
| ! | AGTTGGTGCGCATGGTATGT+GGG | + | tig0017827:26193-26212 | Msa1362350:intron | 50.0% |
| TACTTGGACGATTTCCCTGG+TGG | + | tig0017827:26761-26780 | Msa1362350:CDS | 50.0% | |
| ! | GGAGTACCTTGAGATGACAG+AGG | + | tig0017827:26874-26893 | Msa1362350:CDS | 50.0% |
| ATCTCTTCTCCCTTGGTCTG+AGG | + | tig0017827:26997-27016 | Msa1362350:CDS | 50.0% | |
| AGTCTGTTCCGAAGGATTGG+TGG | + | tig0017827:27170-27189 | Msa1362350:CDS | 50.0% | |
| ! | GTCTGTTCCGAAGGATTGGT+GGG | + | tig0017827:27171-27190 | Msa1362350:CDS | 50.0% |
| TCCTCAACCCACCAATCCTT+CGG | - | tig0017827:27181-27200 | Msa1362350:intergenic | 50.0% | |
| !! | TTGCCGTGTGATAACGGTGT+TGG | + | tig0017827:27397-27416 | Msa1362350:CDS | 50.0% |
| !! | TCCACTTCGAGTTGTAGTGC+AGG | + | tig0017827:28322-28341 | Msa1362350:CDS | 50.0% |
| ACCTGCACTACAACTCGAAG+TGG | - | tig0017827:28326-28345 | Msa1362350:intergenic | 50.0% | |
| CGAGGAATGCGAGAAAACTC+TGG | + | tig0017827:28436-28455 | Msa1362350:CDS | 50.0% | |
| ! | ATGGTACCGCGTTAGGTTGC+CGG | + | tig0017827:24789-24808 | Msa1362350:intron | 55.0% |
| GTGATTCCGGCAACCTAACG+CGG | - | tig0017827:24798-24817 | Msa1362350:intergenic | 55.0% | |
| ! | GCGTTAGGTTGCCGGAATCA+CGG | + | tig0017827:24797-24816 | Msa1362350:intron | 55.0% |
| ! | TTAGGTTGCCGGAATCACGG+TGG | + | tig0017827:24800-24819 | Msa1362350:intron | 55.0% |
| ACTGCTAGCCACCGTGATTC+CGG | - | tig0017827:24811-24830 | Msa1362350:intergenic | 55.0% | |
| GTTGGTGCGCATGGTATGTG+GGG | + | tig0017827:26194-26213 | Msa1362350:intron | 55.0% | |
| !! | TCCGAAGGATTGGTGGGTTG+AGG | + | tig0017827:27177-27196 | Msa1362350:CDS | 55.0% |
| !! | GGACGGTGTTGTGATTGGTG+AGG | + | tig0017827:27267-27286 | Msa1362350:CDS | 55.0% |
| TGATTCCGGCTAGGTCTCCT+GGG | + | tig0017827:27548-27567 | Msa1362350:CDS | 55.0% | |
| GTAATCCCAGGAGACCTAGC+CGG | - | tig0017827:27556-27575 | Msa1362350:intergenic | 55.0% | |
| AGGGCATGTGGAGGATTGTG+TGG | - | tig0017827:28404-28423 | Msa1362350:intergenic | 55.0% | |
| GCATGCAGTTGTTGCCGTCT+CGG | + | tig0017827:28570-28589 | Msa1362350:CDS | 55.0% | |
| CGGTGTCTCAGTGTCGTCTC+CGG | + | tig0017827:25047-25066 | Msa1362350:intron | 60.0% | |
| ! | CGATTTCCCTGGTGGACCCA+AGG | + | tig0017827:26769-26788 | Msa1362350:CDS | 60.0% |
| CAAAGGCCTTGGGTCCACCA+GGG | - | tig0017827:26778-26797 | Msa1362350:intergenic | 60.0% | |
| TCAAAGGCCTTGGGTCCACC+AGG | - | tig0017827:26779-26798 | Msa1362350:intergenic | 60.0% | |
| TGTGGCTGCTCGATGTGCAG+CGG | + | tig0017827:26853-26872 | Msa1362350:CDS | 60.0% | |
| CTGATTCCGGCTAGGTCTCC+TGG | + | tig0017827:27547-27566 | Msa1362350:CDS | 60.0% | |
| AGTTGTTGCCGTCTCGGTCG+AGG | + | tig0017827:28576-28595 | Msa1362350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017827 | gene | 23889 | 28958 | 23889 | ID=Msa1362350;Name=Msa1362350 |
| tig0017827 | mRNA | 23889 | 28958 | 23889 | ID=Msa1362350-mRNA-1;Parent=Msa1362350;Name=Msa1362350-mRNA-1;_AED=0.02;_eAED=0.02;_QI=394|1|1|1|0.75|0.6|5|201|617 |
| tig0017827 | exon | 23889 | 24265 | 23889 | ID=Msa1362350-mRNA-1:exon:12964;Parent=Msa1362350-mRNA-1 |
| tig0017827 | exon | 24304 | 24382 | 24304 | ID=Msa1362350-mRNA-1:exon:12965;Parent=Msa1362350-mRNA-1 |
| tig0017827 | exon | 26530 | 26599 | 26530 | ID=Msa1362350-mRNA-1:exon:12966;Parent=Msa1362350-mRNA-1 |
| tig0017827 | exon | 26686 | 27864 | 26686 | ID=Msa1362350-mRNA-1:exon:12967;Parent=Msa1362350-mRNA-1 |
| tig0017827 | exon | 28215 | 28958 | 28215 | ID=Msa1362350-mRNA-1:exon:12968;Parent=Msa1362350-mRNA-1 |
| tig0017827 | five_prime_UTR | 23889 | 24265 | 23889 | ID=Msa1362350-mRNA-1:five_prime_utr;Parent=Msa1362350-mRNA-1 |
| tig0017827 | five_prime_UTR | 24304 | 24320 | 24304 | ID=Msa1362350-mRNA-1:five_prime_utr;Parent=Msa1362350-mRNA-1 |
| tig0017827 | CDS | 24321 | 24382 | 24321 | ID=Msa1362350-mRNA-1:cds;Parent=Msa1362350-mRNA-1 |
| tig0017827 | CDS | 26530 | 26599 | 26530 | ID=Msa1362350-mRNA-1:cds;Parent=Msa1362350-mRNA-1 |
| tig0017827 | CDS | 26686 | 27864 | 26686 | ID=Msa1362350-mRNA-1:cds;Parent=Msa1362350-mRNA-1 |
| tig0017827 | CDS | 28215 | 28757 | 28215 | ID=Msa1362350-mRNA-1:cds;Parent=Msa1362350-mRNA-1 |
| tig0017827 | three_prime_UTR | 28758 | 28958 | 28758 | ID=Msa1362350-mRNA-1:three_prime_utr;Parent=Msa1362350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
