AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0148780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0148780 MtrunA17_Chr1g0150191 97.569 617 15 0 1 617 1 617 0.0 1233
Msa0148780 MtrunA17_Chr5g0401341 50.619 646 274 13 1 617 1 630 0.0 591
Msa0148780 MtrunA17_Chr1g0207461 48.367 643 288 15 1 617 1 625 0.0 548
Msa0148780 MtrunA17_Chr8g0367891 40.968 620 304 13 1 582 1 596 2.06e-135 408
Msa0148780 MtrunA17_Chr4g0076521 39.046 566 298 11 1 546 1 539 5.46e-134 405
Msa0148780 MtrunA17_Chr5g0412591 43.478 529 228 11 1 493 1 494 1.28e-131 399
Msa0148780 MtrunA17_Chr2g0279481 38.078 541 274 9 6 492 19 552 5.35e-122 376
Msa0148780 MtrunA17_Chr4g0050021 38.772 521 266 9 22 499 39 549 9.02e-122 375
Msa0148780 MtrunA17_Chr2g0290741 35.907 557 315 9 1 548 1 524 5.18e-118 362
Msa0148780 MtrunA17_Chr2g0285511 40.551 508 280 11 1 492 1 502 2.86e-115 357
Msa0148780 MtrunA17_Chr2g0303541 35.809 606 351 12 1 580 1 594 1.23e-114 356
Msa0148780 MtrunA17_Chr8g0382231 33.458 535 273 10 21 517 46 535 5.06e-103 325
Msa0148780 MtrunA17_Chr1g0181181 37.791 516 272 11 1 496 1 487 5.61e-103 323
Msa0148780 MtrunA17_Chr5g0401451 36.882 526 297 14 23 535 36 539 2.29e-101 321
Msa0148780 MtrunA17_Chr2g0320691 34.927 481 289 6 25 487 21 495 2.46e-97 311
Msa0148780 MtrunA17_Chr4g0010091 36.800 500 290 9 18 506 25 509 9.35e-97 308
Msa0148780 MtrunA17_Chr8g0374011 35.458 502 287 10 22 488 15 514 5.15e-96 308
Msa0148780 MtrunA17_Chr4g0053841 34.807 543 314 13 24 546 10 532 1.52e-94 302
Msa0148780 MtrunA17_Chr7g0245201 33.174 627 352 15 19 617 53 640 1.15e-91 296
Msa0148780 MtrunA17_Chr1g0195911 35.865 474 281 7 25 488 34 494 1.15e-88 288
Msa0148780 MtrunA17_Chr1g0199631 38.675 468 262 13 45 496 8 466 1.90e-86 280
Msa0148780 MtrunA17_Chr7g0268781 34.286 490 295 10 25 502 34 508 1.36e-81 269
Msa0148780 MtrunA17_Chr3g0108331 33.402 488 276 9 12 488 11 460 1.35e-79 262
Msa0148780 MtrunA17_Chr1g0191711 31.470 483 275 8 28 501 59 494 4.05e-78 258
Msa0148780 MtrunA17_Chr5g0432861 29.821 503 297 10 12 495 12 477 1.09e-72 244
Msa0148780 MtrunA17_Chr2g0332281 40.484 289 140 7 213 488 24 293 1.07e-56 197
Msa0148780 MtrunA17_Chr4g0003891 39.792 289 140 8 213 488 46 313 2.47e-53 189
Msa0148780 MtrunA17_Chr1g0163311 25.737 509 313 16 30 508 6 479 7.69e-38 147
Msa0148780 MtrunA17_Chr4g0037661 26.457 446 282 11 69 492 49 470 9.56e-38 147
Msa0148780 MtrunA17_Chr4g0023801 25.210 476 320 10 36 505 14 459 9.48e-37 144
Msa0148780 MtrunA17_Chr1g0206621 33.721 172 101 2 35 204 76 236 3.74e-27 110
Msa0148780 MtrunA17_Chr2g0280541 25.128 390 252 9 93 474 1 358 3.69e-22 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0148780 AT4G31820.1 57.797 590 188 13 1 581 1 538 0.0 649
Msa0148780 AT4G31820.2 56.611 537 172 13 54 581 1 485 0.0 569
Msa0148780 AT2G14820.2 52.705 499 224 4 1 493 1 493 1.18e-178 521
Msa0148780 AT2G14820.1 52.705 499 224 4 1 493 1 493 1.18e-178 521
Msa0148780 AT5G67440.3 46.777 605 273 11 1 597 1 564 4.35e-174 507
Msa0148780 AT5G67440.1 46.777 605 273 11 1 597 1 564 4.35e-174 507
Msa0148780 AT4G37590.1 46.218 595 249 16 1 573 1 546 1.07e-166 488
Msa0148780 AT2G23050.1 48.207 502 212 9 1 497 1 459 1.17e-156 459
Msa0148780 AT5G67440.2 45.035 564 261 11 42 597 5 527 2.81e-149 442
Msa0148780 AT1G67900.5 45.143 525 243 9 1 492 1 513 4.45e-141 424
Msa0148780 AT1G67900.1 45.143 525 243 9 1 492 1 513 4.45e-141 424
Msa0148780 AT1G67900.3 45.143 525 243 9 1 492 1 513 4.45e-141 424
Msa0148780 AT1G67900.6 45.143 525 243 9 1 492 1 513 4.45e-141 424
Msa0148780 AT1G67900.2 45.143 525 243 9 1 492 1 513 4.45e-141 424
Msa0148780 AT1G67900.4 45.143 525 243 9 1 492 1 513 4.45e-141 424
Msa0148780 AT3G26490.1 41.233 519 266 12 1 490 1 509 2.58e-123 377
Msa0148780 AT3G26490.3 41.233 519 266 12 1 490 1 509 2.58e-123 377
Msa0148780 AT3G26490.4 41.233 519 266 12 1 490 1 509 2.58e-123 377
Msa0148780 AT5G47800.3 38.067 507 286 6 1 499 1 487 1.20e-122 374
Msa0148780 AT5G47800.1 38.067 507 286 6 1 499 1 487 1.20e-122 374
Msa0148780 AT5G47800.4 38.067 507 286 6 1 499 1 487 1.20e-122 374
Msa0148780 AT5G47800.2 38.067 507 286 6 1 499 114 600 4.63e-121 374
Msa0148780 AT5G03250.1 39.038 520 283 11 1 496 1 510 1.14e-114 355
Msa0148780 AT2G23050.2 43.264 386 176 7 112 497 1 343 6.71e-104 319
Msa0148780 AT1G30440.1 35.728 515 305 8 1 492 1 512 1.82e-102 325
Msa0148780 AT3G26490.2 40.343 466 239 12 1 437 1 456 1.72e-101 318
Msa0148780 AT5G13600.1 37.313 536 295 15 1 512 1 519 4.13e-100 317
Msa0148780 AT5G48800.1 38.105 475 268 7 22 492 36 488 4.74e-96 307
Msa0148780 AT5G67385.1 36.575 473 272 9 24 488 22 474 1.44e-95 305
Msa0148780 AT3G44820.1 33.603 494 297 8 22 487 18 508 3.79e-91 295
Msa0148780 AT1G03010.3 35.674 527 289 14 12 511 18 521 1.77e-88 288
Msa0148780 AT5G66560.1 34.432 546 277 12 22 500 14 545 2.79e-88 288
Msa0148780 AT1G03010.2 35.742 512 281 13 25 511 7 495 6.81e-88 285
Msa0148780 AT1G03010.1 35.742 512 281 13 25 511 34 522 1.65e-87 285
Msa0148780 AT3G08660.1 33.275 571 314 12 19 567 26 551 5.38e-87 282
Msa0148780 AT5G10250.2 33.728 507 251 11 22 488 45 506 6.94e-87 283
Msa0148780 AT2G47860.1 37.137 482 263 11 25 488 35 494 2.65e-86 282
Msa0148780 AT3G08570.1 33.972 574 333 14 19 567 26 578 1.69e-85 280
Msa0148780 AT5G66560.3 34.528 530 266 12 38 500 1 516 4.64e-85 279
Msa0148780 AT5G67385.4 36.303 449 258 9 48 488 1 429 7.16e-85 276
Msa0148780 AT5G67385.5 36.303 449 258 9 48 488 1 429 7.16e-85 276
Msa0148780 AT5G67385.2 36.303 449 258 9 48 488 1 429 7.16e-85 276
Msa0148780 AT5G67385.3 36.303 449 258 9 48 488 1 429 7.16e-85 276
Msa0148780 AT5G10250.1 33.266 496 253 10 22 488 45 491 5.25e-84 275
Msa0148780 AT5G66560.4 37.143 455 249 10 69 500 66 506 3.17e-82 271
Msa0148780 AT3G50840.1 34.792 480 269 8 22 488 11 459 6.96e-82 268
Msa0148780 AT2G47860.3 35.446 505 263 12 25 488 35 517 3.19e-81 269
Msa0148780 AT2G30520.1 32.803 503 278 10 4 488 9 469 3.17e-80 265
Msa0148780 AT3G08660.3 32.890 526 287 11 64 567 10 491 2.19e-76 253
Msa0148780 AT3G49970.1 35.955 445 221 11 38 473 5 394 4.04e-75 249
Msa0148780 AT3G49970.2 35.955 445 221 11 38 473 5 394 4.04e-75 249
Msa0148780 AT5G03250.2 36.609 407 227 9 112 496 1 398 1.03e-72 242
Msa0148780 AT3G50840.2 34.141 454 255 8 48 488 1 423 2.31e-72 242
Msa0148780 AT3G50840.3 34.141 454 255 8 48 488 1 423 2.31e-72 242
Msa0148780 AT2G30520.2 33.043 460 250 11 47 488 2 421 6.14e-71 239
Msa0148780 AT2G30520.3 33.043 460 250 11 47 488 2 421 6.14e-71 239
Msa0148780 AT3G08660.2 34.198 424 240 10 19 437 26 415 1.47e-64 219
Msa0148780 AT2G47860.4 35.267 431 239 11 25 437 35 443 3.20e-64 218
Msa0148780 AT5G66560.2 31.667 480 250 10 22 437 14 479 2.15e-63 217
Msa0148780 AT5G64330.2 39.394 264 144 3 7 256 33 294 2.98e-61 216
Msa0148780 AT5G64330.2 37.959 245 132 5 271 499 373 613 3.19e-43 165
Msa0148780 AT5G64330.1 39.394 264 144 3 7 256 33 294 8.70e-61 216
Msa0148780 AT5G64330.1 37.959 245 132 5 271 499 373 613 3.39e-43 166
Msa0148780 AT2G47860.6 33.480 454 239 12 25 437 35 466 2.74e-59 206
Msa0148780 AT2G47860.5 35.190 395 219 10 112 488 1 376 2.79e-55 196
Msa0148780 AT2G47860.2 35.190 395 219 10 112 488 1 376 2.79e-55 196
Msa0148780 AT1G52770.1 37.288 295 147 6 213 488 28 303 2.25e-54 192
Msa0148780 AT5G64330.3 40.260 231 123 2 40 256 6 235 1.57e-52 190
Msa0148780 AT5G64330.3 37.959 245 132 5 271 499 314 554 1.16e-43 165
Msa0148780 AT5G48130.1 25.203 492 275 13 27 487 39 468 1.15e-51 188
Msa0148780 AT3G15570.1 34.783 299 153 7 213 488 29 308 3.46e-47 172
Msa0148780 AT3G19850.1 27.231 437 276 8 69 487 52 464 1.25e-45 170
Msa0148780 AT5G17580.2 27.273 473 306 10 23 488 16 457 8.21e-41 157
Msa0148780 AT5G17580.1 27.273 473 306 10 23 488 1 442 1.29e-40 156
Msa0148780 AT1G50280.2 27.570 428 278 8 69 482 18 427 9.51e-39 149
Msa0148780 AT1G50280.1 27.570 428 278 8 69 482 51 460 1.20e-38 150
Msa0148780 AT3G03510.1 29.762 420 225 15 77 488 4 361 2.35e-36 142
Msa0148780 AT3G22104.1 24.000 450 287 11 36 473 14 420 9.30e-32 129
Msa0148780 AT3G22104.4 23.117 385 243 9 99 473 4 345 4.59e-22 99.8
Msa0148780 AT3G22104.2 23.117 385 243 9 99 473 4 345 4.59e-22 99.8
Msa0148780 AT3G22104.3 23.117 385 243 9 99 473 4 345 4.59e-22 99.8

Find 149 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAATTACATAGAATTAAT+TGG 0.181392 1_4:-9206025 Msa0148780:three_prime_UTR
ATTCCTCGTCTCCATTTATT+AGG 0.216595 1_4:+9206361 None:intergenic
TCTGAGGATCTAAAGATAAT+TGG 0.223450 1_4:-9207769 Msa0148780:CDS
CAAAAGACATTCTATCTCTT+AGG 0.246837 1_4:-9206046 Msa0148780:exon
CCTCCACATGCCCTAATAAA+TGG 0.253864 1_4:-9206372 Msa0148780:CDS
ATGTAATGTAATTTGAATTA+AGG 0.275791 1_4:-9205926 Msa0148780:three_prime_UTR
GATATGAAAGATAAAGTATT+TGG 0.280957 1_4:-9207124 Msa0148780:CDS
TGTCAAGGATTTACTGATTC+CGG 0.288586 1_4:-9207248 Msa0148780:CDS
CTGATTCCGGCTAGGTCTCC+TGG 0.293524 1_4:-9207235 Msa0148780:CDS
AATGATAACGGTGAAATCTA+AGG 0.298241 1_4:-9207545 Msa0148780:CDS
TGCACATATTTCAAAGGCCT+TGG 0.314739 1_4:+9207996 None:intergenic
GGAGAATATTTGACAAGTTA+TGG 0.336159 1_4:-9206185 Msa0148780:CDS
TACTACTTATGATATTGATT+TGG 0.339422 1_4:-9207209 Msa0148780:CDS
AAAATGAAGTTTATGAAGTT+GGG 0.342765 1_4:-9210685 Msa0148780:CDS
CTGTACAAACCGTCATGATT+TGG 0.348424 1_4:+9206962 None:intergenic
ACTATTTAAAGTGGCCATAC+TGG 0.349780 1_4:-9207338 Msa0148780:CDS
CTTGGAGATACAAAATCTTC+TGG 0.359835 1_4:-9206084 Msa0148780:CDS
AATAGGAGTTCAGAGGCTTC+AGG 0.361947 1_4:-9206135 Msa0148780:CDS
TCCAAGATGAGTTAAGATTA+TGG 0.362037 1_4:+9210990 None:intergenic
TTTGTTTCTTTCTGTCTAGT+AGG 0.364013 1_4:-9205847 Msa0148780:three_prime_UTR
CCATCAGATTGAAGTGCATC+AGG 0.365409 1_4:+9210655 None:intergenic
TTCCTCGTCTCCATTTATTA+GGG 0.365614 1_4:+9206362 None:intergenic
CGTTGCAGAGAAAGTGTGTT+TGG 0.370622 1_4:-9211098 Msa0148780:five_prime_UTR
GCTGTTCATCAATTCTTCTC+TGG 0.372100 1_4:+9207297 None:intergenic
ACCATAATCTTAACTCATCT+TGG 0.388470 1_4:-9210991 Msa0148780:five_prime_UTR
GCCTGATTCTGTTGATGCAT+TGG 0.391893 1_4:-9207464 Msa0148780:CDS
ACCAATGCATCAACAGAATC+AGG 0.394719 1_4:+9207463 None:intergenic
ATGACAGGGGATATTGATAA+AGG 0.403391 1_4:-9207895 Msa0148780:CDS
AATCTGATGGCAAATTTGTC+AGG 0.409140 1_4:-9210642 Msa0148780:intron
TTGTTTCTTTCTGTCTAGTA+GGG 0.411085 1_4:-9205846 Msa0148780:three_prime_UTR
GTTTCGTAAGAGTGTGAGAT+TGG 0.412767 1_4:-9206265 Msa0148780:CDS
CTGAGGATCTAAAGATAATT+GGG 0.417356 1_4:-9207768 Msa0148780:CDS
TGATTTGGTCTAGCAAAATC+TGG 0.421555 1_4:+9206977 None:intergenic
TTATGGAATGTTGGTAGTAA+AGG 0.422184 1_4:-9206168 Msa0148780:CDS
ACAGATATTATCATAGCTAT+TGG 0.425143 1_4:-9208230 Msa0148780:CDS
TATGGAATGTTGGTAGTAAA+GGG 0.426699 1_4:-9206167 Msa0148780:CDS
TAAGACCAAGTGATGTTTGC+CGG 0.434445 1_4:+9207706 None:intergenic
TTCTTCTCTGGATGATTCAT+CGG 0.435084 1_4:+9207309 None:intergenic
CATCAAGTATCTTTCGTAGC+TGG 0.435226 1_4:-9207840 Msa0148780:CDS
ATCTTAACTCATCTTGGACT+TGG 0.439734 1_4:-9210985 Msa0148780:five_prime_UTR
GATGAGTTAAGATTATGGTT+GGG 0.442387 1_4:+9210995 None:intergenic
CGAGGAATGCGAGAAAACTC+TGG 0.444156 1_4:-9206346 Msa0148780:CDS
GCACATATTTCAAAGGCCTT+GGG 0.445735 1_4:+9207997 None:intergenic
TAATTCAGATGAAATTTACT+TGG 0.448094 1_4:-9208037 Msa0148780:CDS
ACGACTTGTTTGTCTGTTGA+GGG 0.448196 1_4:+9206308 None:intergenic
AAAAGAGAGAAAACGTGTTA+AGG 0.451185 1_4:+9210853 None:intergenic
TTCATCGGCTTCAACCAGTA+TGG 0.453351 1_4:+9207324 None:intergenic
GCATGCAGTTGTTGCCGTCT+CGG 0.453505 1_4:-9206212 Msa0148780:CDS
AAGTTGGTTGATAGTTATCT+TGG 0.460673 1_4:-9207061 Msa0148780:CDS
CTTGCTGAAACTATTTAAAG+TGG 0.463625 1_4:-9207347 Msa0148780:CDS
TCCGAAGGATTGGTGGGTTG+AGG 0.463763 1_4:-9207605 Msa0148780:CDS
AAAAGACATTCTATCTCTTA+GGG 0.466446 1_4:-9206045 Msa0148780:exon
TTTGACAAGTTATGGAATGT+TGG 0.466928 1_4:-9206177 Msa0148780:CDS
TCCTCAACCCACCAATCCTT+CGG 0.471360 1_4:+9207604 None:intergenic
TACGAAAGATACTTGATGTA+AGG 0.472293 1_4:+9207845 None:intergenic
AACGACTTGTTTGTCTGTTG+AGG 0.472812 1_4:+9206307 None:intergenic
ATAGGAGTTCAGAGGCTTCA+GGG 0.474284 1_4:-9206134 Msa0148780:CDS
GTTAGCAAATGCTCGGGCAC+TGG 0.475056 1_4:+9206407 None:intergenic
TTGAGTCTGTTCCGAAGGAT+TGG 0.477314 1_4:-9207615 Msa0148780:CDS
CTGCTAAATCTCTTCTCCCT+TGG 0.477644 1_4:-9207792 Msa0148780:CDS
GTAAAGGGCATGGAGAGAAT+AGG 0.477954 1_4:-9206152 Msa0148780:CDS
TGTTTATTGCCGTGTGATAA+CGG 0.480390 1_4:-9207391 Msa0148780:CDS
GAGCAATCGCTTACAGAAGT+TGG 0.481628 1_4:-9208079 Msa0148780:CDS
TCAAAGGCCTTGGGTCCACC+AGG 0.488895 1_4:+9208006 None:intergenic
AGTCCAACTTCTGTAGTCCT+TGG 0.489120 1_4:-9206102 Msa0148780:CDS
TTATAAACGCGTAATGATAA+CGG 0.489211 1_4:-9207557 Msa0148780:CDS
TGCATGGAGGAACAAATCTC+TGG 0.493898 1_4:-9207428 Msa0148780:CDS
TGAAAACCTATGCTGTTAGA+TGG 0.494881 1_4:-9207489 Msa0148780:CDS
ATGAGTTAAGATTATGGTTG+GGG 0.496428 1_4:+9210996 None:intergenic
AAAACGTGTTAAGGAAAGGA+AGG 0.498250 1_4:+9210862 None:intergenic
ATTTACTTGGACGATTTCCC+TGG 0.500638 1_4:-9208024 Msa0148780:CDS
AGATGAGTTAAGATTATGGT+TGG 0.502698 1_4:+9210994 None:intergenic
AGAATGGACGGTGTTGTGAT+TGG 0.502763 1_4:-9207520 Msa0148780:CDS
TGATTCCGGCTAGGTCTCCT+GGG 0.505713 1_4:-9207234 Msa0148780:CDS
GAAATTGACTGCTGATGCAT+CGG 0.507619 1_4:-9206508 Msa0148780:CDS
AGCCATCGATATCTACTTGA+AGG 0.509362 1_4:-9206939 Msa0148780:intron
TCTCCAAGGACTACAGAAGT+TGG 0.509793 1_4:+9206099 None:intergenic
AAACTAGAGAGGCTAAGATT+AGG 0.511940 1_4:+9207022 None:intergenic
AGTCTGTTCCGAAGGATTGG+TGG 0.513817 1_4:-9207612 Msa0148780:CDS
ATCTTTAGATCCTCAGACCA+AGG 0.516375 1_4:+9207775 None:intergenic
TCCACTTCGAGTTGTAGTGC+AGG 0.516877 1_4:-9206460 Msa0148780:CDS
GCGGAGTACCTTGAGATGAC+AGG 0.521651 1_4:-9207910 Msa0148780:CDS
TGGTTTCTGATGCTCATGCA+TGG 0.521841 1_4:-9207444 Msa0148780:CDS
TTGTTTGTCTGTTGAGGGAA+TGG 0.522335 1_4:+9206313 None:intergenic
AGAGAAAACGTGTTAAGGAA+AGG 0.523073 1_4:+9210858 None:intergenic
GGTGAAATCTAAGGGAAGAA+TGG 0.523387 1_4:-9207536 Msa0148780:CDS
AATTAATGTGAAGTGTAAAG+TGG 0.523581 1_4:-9205981 Msa0148780:three_prime_UTR
CTTACAGAAGTTGGTGTCAA+AGG 0.524081 1_4:-9208070 Msa0148780:CDS
TTGATCCGGCAAACATCACT+TGG 0.527188 1_4:-9207711 Msa0148780:CDS
CGATTTCCCTGGTGGACCCA+AGG 0.529641 1_4:-9208013 Msa0148780:CDS
ATCTCTTCTCCCTTGGTCTG+AGG 0.535395 1_4:-9207785 Msa0148780:CDS
AGTTGTTGCCGTCTCGGTCG+AGG 0.536571 1_4:-9206206 Msa0148780:CDS
TTGCCGTGTGATAACGGTGT+TGG 0.537879 1_4:-9207385 Msa0148780:CDS
ACCTGCACTACAACTCGAAG+TGG 0.539338 1_4:+9206459 None:intergenic
CCTGATGCACTTCAATCTGA+TGG 0.542206 1_4:-9210655 Msa0148780:CDS
GAACTTTGCACATATTTCAA+AGG 0.543529 1_4:+9207990 None:intergenic
ATATGTGCAAAGTTCTGCTA+TGG 0.544022 1_4:-9207982 Msa0148780:CDS
ATGCAGTTAATAATGTTAGT+TGG 0.546007 1_4:+9210891 None:intergenic
TCTGAAAAGAAGAACATATG+TGG 0.548360 1_4:-9206546 Msa0148780:CDS
GATTGCTCTTTGACAGTAGA+GGG 0.548395 1_4:+9208094 None:intergenic
TACTTGGACGATTTCCCTGG+TGG 0.549505 1_4:-9208021 Msa0148780:CDS
GAAAATTGAGTCTGTTCCGA+AGG 0.556432 1_4:-9207620 Msa0148780:CDS
AATGAGAGAGGTCTGTACTC+TGG 0.558129 1_4:+9211038 None:intergenic
GATATTGAATCTCGGCAAGT+TGG 0.559092 1_4:-9207077 Msa0148780:CDS
CGGAGTACCTTGAGATGACA+GGG 0.559220 1_4:-9207909 Msa0148780:CDS
ATGATAACGGTGAAATCTAA+GGG 0.563530 1_4:-9207544 Msa0148780:CDS
GTCTGTTCCGAAGGATTGGT+GGG 0.564671 1_4:-9207611 Msa0148780:CDS
TCTCCATTTATTAGGGCATG+TGG 0.566345 1_4:+9206369 None:intergenic
GGTTGAGGATATATGTGAGC+TGG 0.567054 1_4:-9207590 Msa0148780:CDS
AGCAAAGTGTGAGATAGTTG+AGG 0.570159 1_4:+9210805 None:intergenic
ATTGCATGAAGCTTCTGTCA+AGG 0.573895 1_4:-9207263 Msa0148780:CDS
AGGATTTACTGATTCCGGCT+AGG 0.574506 1_4:-9207243 Msa0148780:CDS
AAGTATCTTTCGTAGCTGGA+AGG 0.582873 1_4:-9207836 Msa0148780:CDS
GTGGACTGTTAGCAAATGCT+CGG 0.585051 1_4:+9206400 None:intergenic
AATATTCTCCTCGACCGAGA+CGG 0.585861 1_4:+9206198 None:intergenic
TAGTTTCAGCAAGAAACTAC+AGG 0.589035 1_4:+9207357 None:intergenic
CAATATCCCCTGTCATCTCA+AGG 0.590304 1_4:+9207902 None:intergenic
GTCTTACTTCACAACAAACG+TGG 0.590524 1_4:-9210772 Msa0148780:five_prime_UTR
AAGTGAAGACGAGAGAGTAA+TGG 0.595369 1_4:+9210940 None:intergenic
CGATTGCTCTTTGACAGTAG+AGG 0.595990 1_4:+9208093 None:intergenic
GAGGAATGCGAGAAAACTCT+GGG 0.599575 1_4:-9206345 Msa0148780:CDS
TCTTTAGATCCTCAGACCAA+GGG 0.600214 1_4:+9207776 None:intergenic
GTAATCCCAGGAGACCTAGC+CGG 0.600747 1_4:+9207229 None:intergenic
CCATTTATTAGGGCATGTGG+AGG 0.601063 1_4:+9206372 None:intergenic
TCTGAATGCTTACAATGTTG+TGG 0.606892 1_4:-9207947 Msa0148780:CDS
TGGACTGTTAGCAAATGCTC+GGG 0.608053 1_4:+9206401 None:intergenic
AATGTTGGTAGTAAAGGGCA+TGG 0.608411 1_4:-9206162 Msa0148780:CDS
CTCAAAAGAGTGAATGAGAG+AGG 0.609313 1_4:+9211026 None:intergenic
AATAGGGCGATATTGAATCT+CGG 0.610706 1_4:-9207085 Msa0148780:CDS
TACCTTCAAGTAGATATCGA+TGG 0.617470 1_4:+9206937 None:intergenic
ATATCATAAGTAGTAATCCC+AGG 0.618972 1_4:+9207217 None:intergenic
AGGCAACCATCTAACAGCAT+AGG 0.619442 1_4:+9207483 None:intergenic
ACAAATCAACAAAACTAGAG+AGG 0.619836 1_4:+9207011 None:intergenic
TGGAGAGAATAGGAGTTCAG+AGG 0.626635 1_4:-9206142 Msa0148780:CDS
CAACCAACACCGTTATCACA+CGG 0.627146 1_4:+9207382 None:intergenic
TTTGCTAGACCAAATCATGA+CGG 0.635280 1_4:-9206971 Msa0148780:CDS
AAATCTAAGGGAAGAATGGA+CGG 0.638803 1_4:-9207532 Msa0148780:CDS
AATGTGAAGTGTAAAGTGGT+AGG 0.643484 1_4:-9205977 Msa0148780:three_prime_UTR
TGTGGCTGCTCGATGTGCAG+CGG 0.654801 1_4:-9207929 Msa0148780:CDS
ACAGGTCGATAAAGTCGTTG+AGG 0.658797 1_4:-9207662 Msa0148780:CDS
AGGGCATGTGGAGGATTGTG+TGG 0.662550 1_4:+9206381 None:intergenic
TCTTACTTCACAACAAACGT+GGG 0.672896 1_4:-9210771 Msa0148780:five_prime_UTR
TGTAAAGTTTGACCTTCACA+AGG 0.678188 1_4:-9208204 Msa0148780:intron
TGCCCTAATAAATGGAGACG+AGG 0.682274 1_4:-9206364 Msa0148780:CDS
CAAAGGCCTTGGGTCCACCA+GGG 0.683009 1_4:+9208007 None:intergenic
GGACGGTGTTGTGATTGGTG+AGG 0.691521 1_4:-9207515 Msa0148780:CDS
TTACAACCGAAAATTAACAC+AGG 0.700722 1_4:-9207680 Msa0148780:CDS
TTTCTGATGCTCATGCATGG+AGG 0.746693 1_4:-9207441 Msa0148780:CDS
GGAGTACCTTGAGATGACAG+GGG 0.770600 1_4:-9207908 Msa0148780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATTATTTCATAAATATTA+TGG - chr1_4:9207502-9207521 Msa0148780:CDS 10.0%
!! TATTAACATAAAAAAATGAT+TGG + chr1_4:9208089-9208108 None:intergenic 10.0%
!! AATATAAACTGAAATAGTTT+AGG - chr1_4:9206541-9206560 Msa0148780:CDS 15.0%
!! TATGTTATTATTAACTGTAA+AGG - chr1_4:9207183-9207202 Msa0148780:CDS 15.0%
!! ATGTTATTATTAACTGTAAA+GGG - chr1_4:9207184-9207203 Msa0148780:CDS 15.0%
!! GTAAAACTAATGATATATAT+AGG + chr1_4:9207419-9207438 None:intergenic 15.0%
!! TATTTCATAAATATTATGGT+TGG - chr1_4:9207506-9207525 Msa0148780:CDS 15.0%
!!! CTTGATTTTTTAACTTAATT+TGG + chr1_4:9207622-9207641 None:intergenic 15.0%
!! AATTAAGTTAAAAAATCAAG+AGG - chr1_4:9207622-9207641 Msa0148780:CDS 15.0%
!! ATTAAGTTAAAAAATCAAGA+GGG - chr1_4:9207623-9207642 Msa0148780:CDS 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + chr1_4:9207782-9207801 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr1_4:9207783-9207802 None:intergenic 15.0%
!! TGATTAATATCAACAATTAT+TGG + chr1_4:9207951-9207970 None:intergenic 15.0%
!!! TGCAACTATTTTATTAAATA+AGG + chr1_4:9208144-9208163 None:intergenic 15.0%
!!! AGTTTTATTAAAAAATGCAA+TGG - chr1_4:9208456-9208475 Msa0148780:intron 15.0%
!!! TTATTTTCTCAAATTATTTC+AGG + chr1_4:9210158-9210177 None:intergenic 15.0%
!! ATGTAATGTAATTTGAATTA+AGG - chr1_4:9211036-9211055 Msa0148780:five_prime_UTR 15.0%
!!! ACTTTCTTTGTTTTTTTGTT+TGG - chr1_4:9206237-9206256 Msa0148780:CDS 20.0%
!! AAAAATGAAGTTTATGAAGT+TGG - chr1_4:9206276-9206295 Msa0148780:CDS 20.0%
!! AAAATGAAGTTTATGAAGTT+GGG - chr1_4:9206277-9206296 Msa0148780:CDS 20.0%
!!! AATGTTTTAAAAACCAAACA+TGG - chr1_4:9206726-9206745 Msa0148780:intron 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG - chr1_4:9206979-9206998 Msa0148780:CDS 20.0%
!! ATATATTGAAACTATTTCAG+TGG + chr1_4:9207133-9207152 None:intergenic 20.0%
!! GTAGTGTACTATTAAATTAT+TGG - chr1_4:9207585-9207604 Msa0148780:CDS 20.0%
!!! GATTTTTTAACTTAATTTGG+AGG + chr1_4:9207619-9207638 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr1_4:9207713-9207732 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG + chr1_4:9207823-9207842 None:intergenic 20.0%
!!! AAGAAAAGTGTATAAATGAA+GGG + chr1_4:9207847-9207866 None:intergenic 20.0%
!!! TAAGAAAAGTGTATAAATGA+AGG + chr1_4:9207848-9207867 None:intergenic 20.0%
!! TTAATATCAACAATTATTGG+TGG + chr1_4:9207948-9207967 None:intergenic 20.0%
!!! ACTTTAAAAAGCTAGTATTT+TGG - chr1_4:9207977-9207996 Msa0148780:CDS 20.0%
!!! TATTACATTTTTCTATCACT+AGG + chr1_4:9208437-9208456 None:intergenic 20.0%
!! TAATTCAGATGAAATTTACT+TGG - chr1_4:9208925-9208944 Msa0148780:intron 20.0%
!!! TACTACTTATGATATTGATT+TGG - chr1_4:9209753-9209772 Msa0148780:intron 20.0%
!!! GATATGAAAGATAAAGTATT+TGG - chr1_4:9209838-9209857 Msa0148780:intron 20.0%
!!! TATTTGGTGAATCTATTTTA+GGG - chr1_4:9209854-9209873 Msa0148780:intron 20.0%
! ATGCAGTTAATAATGTTAGT+TGG + chr1_4:9206074-9206093 None:intergenic 25.0%
! CTAAAGAAACAAGAAAGTAA+AGG + chr1_4:9206407-9206426 None:intergenic 25.0%
!! TTTTTCTTTTTCTGTACTGT+TGG - chr1_4:9206451-9206470 Msa0148780:CDS 25.0%
! GCAACATAAAAAGATTCAAA+CGG + chr1_4:9206591-9206610 None:intergenic 25.0%
!! TTTGTTATGACAGTAAATCA+CGG - chr1_4:9206614-9206633 Msa0148780:intron 25.0%
!! AGTTTCTGGAAAATAAATCA+CGG + chr1_4:9206647-9206666 None:intergenic 25.0%
!!! TTTATTTTCCAGAAACTTTG+AGG - chr1_4:9206650-9206669 Msa0148780:intron 25.0%
! ACATTGCTTTGTATATGTTT+CGG + chr1_4:9206711-9206730 None:intergenic 25.0%
! TGAGAAAATCAAGTAATTCA+AGG + chr1_4:9206970-9206989 None:intergenic 25.0%
! TTGCATACAATGAGTTATAT+GGG + chr1_4:9207106-9207125 None:intergenic 25.0%
! TTTGCATACAATGAGTTATA+TGG + chr1_4:9207107-9207126 None:intergenic 25.0%
!!! ATAGTTTGCAAAGTCTTTTA+TGG - chr1_4:9207342-9207361 Msa0148780:CDS 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr1_4:9207714-9207733 None:intergenic 25.0%
! GCTGTATTGAAAATTGAAAT+GGG + chr1_4:9207749-9207768 None:intergenic 25.0%
! AGCTGTATTGAAAATTGAAA+TGG + chr1_4:9207750-9207769 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG + chr1_4:9207824-9207843 None:intergenic 25.0%
!! AGAAAAGTGTATAAATGAAG+GGG + chr1_4:9207846-9207865 None:intergenic 25.0%
! AAATAGTTGCAAGTATATGA+TGG - chr1_4:9208153-9208172 Msa0148780:intron 25.0%
! TAACTTATACAAGGAAAGAT+GGG + chr1_4:9208651-9208670 None:intergenic 25.0%
! TACAAAGTGTAACTTATACA+AGG + chr1_4:9208660-9208679 None:intergenic 25.0%
! AATTCATTTCCAATTTATGC+AGG - chr1_4:9208688-9208707 Msa0148780:intron 25.0%
! ACAGATATTATCATAGCTAT+TGG - chr1_4:9208732-9208751 Msa0148780:intron 25.0%
! TTTAACAGGAAACTAATACA+AGG + chr1_4:9208802-9208821 None:intergenic 25.0%
! AGAAGAATTGCTTATTTAAC+AGG + chr1_4:9208816-9208835 None:intergenic 25.0%
! TTATAAACGCGTAATGATAA+CGG - chr1_4:9209405-9209424 Msa0148780:intron 25.0%
!!! GTATTTGGTGAATCTATTTT+AGG - chr1_4:9209853-9209872 Msa0148780:intron 25.0%
!!! TGAATCTATTTTAGGGAATA+GGG - chr1_4:9209861-9209880 Msa0148780:intron 25.0%
!! TATTTTGTTAGTGTCATGTT+AGG + chr1_4:9210132-9210151 None:intergenic 25.0%
!!! TGTTCTAAAATGTGATATAC+TGG + chr1_4:9210287-9210306 None:intergenic 25.0%
! TATTAAGACAAAGAACAGAT+TGG + chr1_4:9210332-9210351 None:intergenic 25.0%
!! TTTCAGATTTTGTCAAACTT+GGG + chr1_4:9210403-9210422 None:intergenic 25.0%
!! TTTTCAGATTTTGTCAAACT+TGG + chr1_4:9210404-9210423 None:intergenic 25.0%
! AAAAGACATTCTATCTCTTA+GGG - chr1_4:9210917-9210936 Msa0148780:five_prime_UTR 25.0%
! GGGAATTACATAGAATTAAT+TGG - chr1_4:9210937-9210956 Msa0148780:five_prime_UTR 25.0%
! AATTAATGTGAAGTGTAAAG+TGG - chr1_4:9210981-9211000 Msa0148780:five_prime_UTR 25.0%
ATGAGTTAAGATTATGGTTG+GGG + chr1_4:9205969-9205988 None:intergenic 30.0%
GATGAGTTAAGATTATGGTT+GGG + chr1_4:9205970-9205989 None:intergenic 30.0%
AGATGAGTTAAGATTATGGT+TGG + chr1_4:9205971-9205990 None:intergenic 30.0%
ACCATAATCTTAACTCATCT+TGG - chr1_4:9205971-9205990 Msa0148780:three_prime_UTR 30.0%
TCCAAGATGAGTTAAGATTA+TGG + chr1_4:9205975-9205994 None:intergenic 30.0%
!!! GACTTGGTTTTAAGCAAATA+AGG - chr1_4:9205993-9206012 Msa0148780:three_prime_UTR 30.0%
!!! TTGGTTTTAAGCAAATAAGG+CGG - chr1_4:9205996-9206015 Msa0148780:three_prime_UTR 30.0%
AAAAGAGAGAAAACGTGTTA+AGG + chr1_4:9206112-9206131 None:intergenic 30.0%
! AAGTTTGAGACAAAACAACA+AGG + chr1_4:9206221-9206240 None:intergenic 30.0%
ACTGAAATAGTTTAGGTGTT+TGG - chr1_4:9206548-9206567 Msa0148780:CDS 30.0%
AAAAAGATTCAAACGGTTAC+TGG + chr1_4:9206584-9206603 None:intergenic 30.0%
TTCGGTATCACAATAAGTTT+GGG + chr1_4:9206693-9206712 None:intergenic 30.0%
TTTCGGTATCACAATAAGTT+TGG + chr1_4:9206694-9206713 None:intergenic 30.0%
! GTGATTTTGCAAAAGCTATA+AGG - chr1_4:9206785-9206804 Msa0148780:intron 30.0%
! GTAATTATATGTGTCGATGT+TGG + chr1_4:9206948-9206967 None:intergenic 30.0%
! TGTAGCACATGATTTTTAAC+AGG + chr1_4:9207542-9207561 None:intergenic 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + chr1_4:9207735-9207754 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + chr1_4:9207736-9207755 None:intergenic 30.0%
! ATTTGATCAAGTTTTGCGTT+TGG - chr1_4:9208300-9208319 Msa0148780:intron 30.0%
GAATCAAACTCAATACTTCA+GGG + chr1_4:9208415-9208434 None:intergenic 30.0%
! ACATGCATCTTAATACCTTT+TGG - chr1_4:9208512-9208531 Msa0148780:intron 30.0%
AACTTATACAAGGAAAGATG+GGG + chr1_4:9208650-9208669 None:intergenic 30.0%
GTAACTTATACAAGGAAAGA+TGG + chr1_4:9208652-9208671 None:intergenic 30.0%
TGATATGTACCTGCATAAAT+TGG + chr1_4:9208700-9208719 None:intergenic 30.0%
GAACTTTGCACATATTTCAA+AGG + chr1_4:9208975-9208994 None:intergenic 30.0%
TACGAAAGATACTTGATGTA+AGG + chr1_4:9209120-9209139 None:intergenic 30.0%
TCTGAGGATCTAAAGATAAT+TGG - chr1_4:9209193-9209212 Msa0148780:intron 30.0%
CTGAGGATCTAAAGATAATT+GGG - chr1_4:9209194-9209213 Msa0148780:intron 30.0%
! AACAGAAGTTTTTGATGCTA+TGG + chr1_4:9209233-9209252 None:intergenic 30.0%
ATCAAAAACTTCTGTTGATC+CGG - chr1_4:9209237-9209256 Msa0148780:intron 30.0%
TTACAACCGAAAATTAACAC+AGG - chr1_4:9209282-9209301 Msa0148780:intron 30.0%
! TATCGACCTGTGTTAATTTT+CGG + chr1_4:9209291-9209310 None:intergenic 30.0%
!! AATGATAACGGTGAAATCTA+AGG - chr1_4:9209417-9209436 Msa0148780:intron 30.0%
!! ATGATAACGGTGAAATCTAA+GGG - chr1_4:9209418-9209437 Msa0148780:intron 30.0%
CTTGCTGAAACTATTTAAAG+TGG - chr1_4:9209615-9209634 Msa0148780:intron 30.0%
ATATCATAAGTAGTAATCCC+AGG + chr1_4:9209748-9209767 None:intergenic 30.0%
! AAAGAAAAAGCGTGATATTG+AGG - chr1_4:9209810-9209829 Msa0148780:intron 30.0%
!! GTGAATCTATTTTAGGGAAT+AGG - chr1_4:9209860-9209879 Msa0148780:intron 30.0%
!! AAGTTGGTTGATAGTTATCT+TGG - chr1_4:9209901-9209920 Msa0148780:intron 30.0%
ACAAATCAACAAAACTAGAG+AGG + chr1_4:9209954-9209973 None:intergenic 30.0%
!!! ATTTTTTGTCTGTGAAGCAT+TGG - chr1_4:9210092-9210111 Msa0148780:intron 30.0%
TCTGAAAAGAAGAACATATG+TGG - chr1_4:9210416-9210435 Msa0148780:intron 30.0%
GGAGAATATTTGACAAGTTA+TGG - chr1_4:9210777-9210796 Msa0148780:five_prime_UTR 30.0%
TTTGACAAGTTATGGAATGT+TGG - chr1_4:9210785-9210804 Msa0148780:five_prime_UTR 30.0%
!! TTATGGAATGTTGGTAGTAA+AGG - chr1_4:9210794-9210813 Msa0148780:five_prime_UTR 30.0%
!! TATGGAATGTTGGTAGTAAA+GGG - chr1_4:9210795-9210814 Msa0148780:five_prime_UTR 30.0%
! AGAATGTCTTTTGTGTCTTA+AGG + chr1_4:9210909-9210928 None:intergenic 30.0%
CAAAAGACATTCTATCTCTT+AGG - chr1_4:9210916-9210935 Msa0148780:five_prime_UTR 30.0%
! TTTGTTTCTTTCTGTCTAGT+AGG - chr1_4:9211115-9211134 Msa0148780:five_prime_UTR 30.0%
ATCTTAACTCATCTTGGACT+TGG - chr1_4:9205977-9205996 Msa0148780:three_prime_UTR 35.0%
AAAACGTGTTAAGGAAAGGA+AGG + chr1_4:9206103-9206122 None:intergenic 35.0%
AGAGAAAACGTGTTAAGGAA+AGG + chr1_4:9206107-9206126 None:intergenic 35.0%
TCTTACTTCACAACAAACGT+GGG - chr1_4:9206191-9206210 Msa0148780:CDS 35.0%
AATCTGATGGCAAATTTGTC+AGG - chr1_4:9206320-9206339 Msa0148780:CDS 35.0%
!! ATTTTCCAGAAACTTTGAGG+TGG - chr1_4:9206653-9206672 Msa0148780:intron 35.0%
CAATAAGTTTGGGAGAATCA+AGG + chr1_4:9206683-9206702 None:intergenic 35.0%
TCTCAAATTATTAGCGGTGT+CGG - chr1_4:9206985-9207004 Msa0148780:CDS 35.0%
AAGATGCCAGCTATGAAATA+CGG + chr1_4:9207040-9207059 None:intergenic 35.0%
GTTATATGGGTTTCTCTTGA+AGG + chr1_4:9207093-9207112 None:intergenic 35.0%
AGAGAGAGAGGTTTAATTGA+AGG - chr1_4:9207223-9207242 Msa0148780:CDS 35.0%
ACCAGAAACTCACAATTTGA+AGG + chr1_4:9207257-9207276 None:intergenic 35.0%
TCCAAACAGTGTGTATGTAT+AGG - chr1_4:9207288-9207307 Msa0148780:CDS 35.0%
ACCTATACATACACACTGTT+TGG + chr1_4:9207292-9207311 None:intergenic 35.0%
AAACAGTGTGTATGTATAGG+TGG - chr1_4:9207291-9207310 Msa0148780:CDS 35.0%
! TTTTAGCATGTGAGTTTCAC+TGG - chr1_4:9207440-9207459 Msa0148780:CDS 35.0%
CTACACATGTATTCCACATT+TGG - chr1_4:9207557-9207576 Msa0148780:CDS 35.0%
AGACATGCTTAACAAAGCAT+TGG + chr1_4:9207662-9207681 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr1_4:9207700-9207719 None:intergenic 35.0%
TGTATAAATGAAGGGGAAAG+TGG + chr1_4:9207839-9207858 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG - chr1_4:9207869-9207888 Msa0148780:CDS 35.0%
CCAAAGTAGGTCAATTATAC+CGG - chr1_4:9207882-9207901 Msa0148780:CDS 35.0%
CAAAGTAGGTCAATTATACC+GGG - chr1_4:9207883-9207902 Msa0148780:CDS 35.0%
!!! TGCAGTTAGCCATTTTTGTA+GGG - chr1_4:9208007-9208026 Msa0148780:CDS 35.0%
ATTTGCAGACCCTACAAAAA+TGG + chr1_4:9208019-9208038 None:intergenic 35.0%
TACACTAATAGTTTACCACC+AGG - chr1_4:9208347-9208366 Msa0148780:intron 35.0%
ACACTAATAGTTTACCACCA+GGG - chr1_4:9208348-9208367 Msa0148780:intron 35.0%
GGAATCAAACTCAATACTTC+AGG + chr1_4:9208416-9208435 None:intergenic 35.0%
! TGTTTTTCACCACATTCACA+TGG + chr1_4:9208495-9208514 None:intergenic 35.0%
TGTAAAGTTTGACCTTCACA+AGG - chr1_4:9208758-9208777 Msa0148780:intron 35.0%
! AAAAAGTACACACCTTGTGA+AGG + chr1_4:9208773-9208792 None:intergenic 35.0%
ATATGTGCAAAGTTCTGCTA+TGG - chr1_4:9208980-9208999 Msa0148780:intron 35.0%
TCTGAATGCTTACAATGTTG+TGG - chr1_4:9209015-9209034 Msa0148780:intron 35.0%
ATGACAGGGGATATTGATAA+AGG - chr1_4:9209067-9209086 Msa0148780:intron 35.0%
AAATCTAAGGGAAGAATGGA+CGG - chr1_4:9209430-9209449 Msa0148780:intron 35.0%
TGAAAACCTATGCTGTTAGA+TGG - chr1_4:9209473-9209492 Msa0148780:intron 35.0%
TGTTTATTGCCGTGTGATAA+CGG - chr1_4:9209571-9209590 Msa0148780:intron 35.0%
TAGTTTCAGCAAGAAACTAC+AGG + chr1_4:9209608-9209627 None:intergenic 35.0%
! ACTATTTAAAGTGGCCATAC+TGG - chr1_4:9209624-9209643 Msa0148780:intron 35.0%
TTCTTCTCTGGATGATTCAT+CGG + chr1_4:9209656-9209675 None:intergenic 35.0%
!! TGTCAAGGATTTACTGATTC+CGG - chr1_4:9209714-9209733 Msa0148780:intron 35.0%
AATAGGGCGATATTGAATCT+CGG - chr1_4:9209877-9209896 Msa0148780:intron 35.0%
AAACTAGAGAGGCTAAGATT+AGG + chr1_4:9209943-9209962 None:intergenic 35.0%
!! TGATTTGGTCTAGCAAAATC+TGG + chr1_4:9209988-9210007 None:intergenic 35.0%
TTTGCTAGACCAAATCATGA+CGG - chr1_4:9209991-9210010 Msa0148780:intron 35.0%
TACCTTCAAGTAGATATCGA+TGG + chr1_4:9210028-9210047 None:intergenic 35.0%
! AAGGTAAGATTTTGCTACCT+TGG - chr1_4:9210042-9210061 Msa0148780:intron 35.0%
! CATTTGCGTGAATCATTTTC+AGG - chr1_4:9210373-9210392 Msa0148780:intron 35.0%
TTCCTCGTCTCCATTTATTA+GGG + chr1_4:9210603-9210622 None:intergenic 35.0%
ATTCCTCGTCTCCATTTATT+AGG + chr1_4:9210604-9210623 None:intergenic 35.0%
AGTAGCAAAAATAGCAGAAG+TGG - chr1_4:9210728-9210747 Msa0148780:intron 35.0%
! CAGAAGATTTTGTATCTCCA+AGG + chr1_4:9210880-9210899 None:intergenic 35.0%
CTTGGAGATACAAAATCTTC+TGG - chr1_4:9210878-9210897 Msa0148780:five_prime_UTR 35.0%
AATGTGAAGTGTAAAGTGGT+AGG - chr1_4:9210985-9211004 Msa0148780:five_prime_UTR 35.0%
CTCAAAAGAGTGAATGAGAG+AGG + chr1_4:9205939-9205958 None:intergenic 40.0%
AAGTGAAGACGAGAGAGTAA+TGG + chr1_4:9206025-9206044 None:intergenic 40.0%
AGCAAAGTGTGAGATAGTTG+AGG + chr1_4:9206160-9206179 None:intergenic 40.0%
GTCTTACTTCACAACAAACG+TGG - chr1_4:9206190-9206209 Msa0148780:CDS 40.0%
GTAAACCACCTCAAAGTTTC+TGG + chr1_4:9206661-9206680 None:intergenic 40.0%
! GATTAGTCATGTCCCAATGT+CGG - chr1_4:9206916-9206935 Msa0148780:intron 40.0%
CCAGCTATGAAATACGGATA+CGG + chr1_4:9207034-9207053 None:intergenic 40.0%
GAGAGAGGTTTAATTGAAGG+TGG - chr1_4:9207226-9207245 Msa0148780:CDS 40.0%
GAAACTCACAATTTGAAGGC+TGG + chr1_4:9207253-9207272 None:intergenic 40.0%
GCCTTCAAATTGTGAGTTTC+TGG - chr1_4:9207253-9207272 Msa0148780:CDS 40.0%
GTGTGTATGTATAGGTGGTA+TGG - chr1_4:9207296-9207315 Msa0148780:CDS 40.0%
TACACTACACTGACCAAATG+TGG + chr1_4:9207573-9207592 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr1_4:9207699-9207718 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG + chr1_4:9207885-9207904 None:intergenic 40.0%
CTACAAAAATGGCTAACTGC+AGG + chr1_4:9208008-9208027 None:intergenic 40.0%
!!! CTGCAGTTAGCCATTTTTGT+AGG - chr1_4:9208006-9208025 Msa0148780:CDS 40.0%
GTGATGTATCCATGTGAATG+TGG - chr1_4:9208483-9208502 Msa0148780:intron 40.0%
GCAACTGAAATTCAGCCAAA+AGG + chr1_4:9208530-9208549 None:intergenic 40.0%
ATTTGCATGCCTACATTGTG+TGG - chr1_4:9208583-9208602 Msa0148780:intron 40.0%
TTTGCATGCCTACATTGTGT+GGG - chr1_4:9208584-9208603 Msa0148780:intron 40.0%
ACAATTACCCCACACAATGT+AGG + chr1_4:9208595-9208614 None:intergenic 40.0%
GATTGCTCTTTGACAGTAGA+GGG + chr1_4:9208871-9208890 None:intergenic 40.0%
!! CTTACAGAAGTTGGTGTCAA+AGG - chr1_4:9208892-9208911 Msa0148780:intron 40.0%
ATTTACTTGGACGATTTCCC+TGG - chr1_4:9208938-9208957 Msa0148780:intron 40.0%
GCACATATTTCAAAGGCCTT+GGG + chr1_4:9208968-9208987 None:intergenic 40.0%
TGCACATATTTCAAAGGCCT+TGG + chr1_4:9208969-9208988 None:intergenic 40.0%
CATCAAGTATCTTTCGTAGC+TGG - chr1_4:9209122-9209141 Msa0148780:intron 40.0%
AAGTATCTTTCGTAGCTGGA+AGG - chr1_4:9209126-9209145 Msa0148780:intron 40.0%
TCTTTAGATCCTCAGACCAA+GGG + chr1_4:9209189-9209208 None:intergenic 40.0%
ATCTTTAGATCCTCAGACCA+AGG + chr1_4:9209190-9209209 None:intergenic 40.0%
TAAGACCAAGTGATGTTTGC+CGG + chr1_4:9209259-9209278 None:intergenic 40.0%
GGTGAAATCTAAGGGAAGAA+TGG - chr1_4:9209426-9209445 Msa0148780:intron 40.0%
ACCAATGCATCAACAGAATC+AGG + chr1_4:9209502-9209521 None:intergenic 40.0%
GCTGTTCATCAATTCTTCTC+TGG + chr1_4:9209668-9209687 None:intergenic 40.0%
ATTGCATGAAGCTTCTGTCA+AGG - chr1_4:9209699-9209718 Msa0148780:intron 40.0%
GATATTGAATCTCGGCAAGT+TGG - chr1_4:9209885-9209904 Msa0148780:intron 40.0%
CTGTACAAACCGTCATGATT+TGG + chr1_4:9210003-9210022 None:intergenic 40.0%
AGCCATCGATATCTACTTGA+AGG - chr1_4:9210023-9210042 Msa0148780:intron 40.0%
! GTAAGATTTTGCTACCTTGG+AGG - chr1_4:9210045-9210064 Msa0148780:intron 40.0%
AAGAAGTGAAAACACCTCCA+AGG + chr1_4:9210062-9210081 None:intergenic 40.0%
! ATGTCTTCCACAGAAAGTGT+CGG - chr1_4:9210205-9210224 Msa0148780:intron 40.0%
! TAGTTGTGCAAGCATTGTTC+AGG + chr1_4:9210264-9210283 None:intergenic 40.0%
GAAATTGACTGCTGATGCAT+CGG - chr1_4:9210454-9210473 Msa0148780:intron 40.0%
TCTCCATTTATTAGGGCATG+TGG + chr1_4:9210596-9210615 None:intergenic 40.0%
TTGTTTGTCTGTTGAGGGAA+TGG + chr1_4:9210652-9210671 None:intergenic 40.0%
! ACGACTTGTTTGTCTGTTGA+GGG + chr1_4:9210657-9210676 None:intergenic 40.0%
! AACGACTTGTTTGTCTGTTG+AGG + chr1_4:9210658-9210677 None:intergenic 40.0%
! GTTTCGTAAGAGTGTGAGAT+TGG - chr1_4:9210697-9210716 Msa0148780:exon 40.0%
!! AATGTTGGTAGTAAAGGGCA+TGG - chr1_4:9210800-9210819 Msa0148780:five_prime_UTR 40.0%
! CGTTGCAGAGAAAGTGTGTT+TGG - chr1_4:9205864-9205883 Msa0148780:three_prime_UTR 45.0%
AATGAGAGAGGTCTGTACTC+TGG + chr1_4:9205927-9205946 None:intergenic 45.0%
CCATCAGATTGAAGTGCATC+AGG + chr1_4:9206310-9206329 None:intergenic 45.0%
CCTGATGCACTTCAATCTGA+TGG - chr1_4:9206307-9206326 Msa0148780:CDS 45.0%
GATAGGATGTCTGCTAGGTT+CGG + chr1_4:9206877-9206896 None:intergenic 45.0%
ATTGGGACATGACTAATCCG+AGG + chr1_4:9206914-9206933 None:intergenic 45.0%
TGAAATACGGATACGGACAC+CGG + chr1_4:9207027-9207046 None:intergenic 45.0%
CCGTATCCGTATTTCATAGC+TGG - chr1_4:9207031-9207050 Msa0148780:CDS 45.0%
!! TGAGTTTCTGGTTGAGCTTG+TGG - chr1_4:9207265-9207284 Msa0148780:CDS 45.0%
GTAGGTCAATTATACCGGGA+CGG - chr1_4:9207887-9207906 Msa0148780:CDS 45.0%
CAACTACTTTCACTACACCC+TGG + chr1_4:9208368-9208387 None:intergenic 45.0%
CAGGGTGTAGTGAAAGTAGT+TGG - chr1_4:9208366-9208385 Msa0148780:intron 45.0%
TTGCATGCCTACATTGTGTG+GGG - chr1_4:9208585-9208604 Msa0148780:intron 45.0%
CGATTGCTCTTTGACAGTAG+AGG + chr1_4:9208872-9208891 None:intergenic 45.0%
GAGCAATCGCTTACAGAAGT+TGG - chr1_4:9208883-9208902 Msa0148780:intron 45.0%
CAATATCCCCTGTCATCTCA+AGG + chr1_4:9209063-9209082 None:intergenic 45.0%
CTGCTAAATCTCTTCTCCCT+TGG - chr1_4:9209170-9209189 Msa0148780:intron 45.0%
TTGATCCGGCAAACATCACT+TGG - chr1_4:9209251-9209270 Msa0148780:intron 45.0%
ACAGGTCGATAAAGTCGTTG+AGG - chr1_4:9209300-9209319 Msa0148780:intron 45.0%
TTGAGTCTGTTCCGAAGGAT+TGG - chr1_4:9209347-9209366 Msa0148780:intron 45.0%
GGTTGAGGATATATGTGAGC+TGG - chr1_4:9209372-9209391 Msa0148780:intron 45.0%
!! AGAATGGACGGTGTTGTGAT+TGG - chr1_4:9209442-9209461 Msa0148780:intron 45.0%
AGGCAACCATCTAACAGCAT+AGG + chr1_4:9209482-9209501 None:intergenic 45.0%
GCCTGATTCTGTTGATGCAT+TGG - chr1_4:9209498-9209517 Msa0148780:intron 45.0%
TGGTTTCTGATGCTCATGCA+TGG - chr1_4:9209518-9209537 Msa0148780:intron 45.0%
TTTCTGATGCTCATGCATGG+AGG - chr1_4:9209521-9209540 Msa0148780:intron 45.0%
TGCATGGAGGAACAAATCTC+TGG - chr1_4:9209534-9209553 Msa0148780:intron 45.0%
CAACCAACACCGTTATCACA+CGG + chr1_4:9209583-9209602 None:intergenic 45.0%
!! TTCATCGGCTTCAACCAGTA+TGG + chr1_4:9209641-9209660 None:intergenic 45.0%
!! AGGATTTACTGATTCCGGCT+AGG - chr1_4:9209719-9209738 Msa0148780:intron 45.0%
!! TATAGCACCGACACTTTCTG+TGG + chr1_4:9210215-9210234 None:intergenic 45.0%
TGGACTGTTAGCAAATGCTC+GGG + chr1_4:9210564-9210583 None:intergenic 45.0%
! GTGGACTGTTAGCAAATGCT+CGG + chr1_4:9210565-9210584 None:intergenic 45.0%
CCATTTATTAGGGCATGTGG+AGG + chr1_4:9210593-9210612 None:intergenic 45.0%
CCTCCACATGCCCTAATAAA+TGG - chr1_4:9210590-9210609 Msa0148780:intron 45.0%
TGCCCTAATAAATGGAGACG+AGG - chr1_4:9210598-9210617 Msa0148780:intron 45.0%
GAGGAATGCGAGAAAACTCT+GGG - chr1_4:9210617-9210636 Msa0148780:intron 45.0%
AATATTCTCCTCGACCGAGA+CGG + chr1_4:9210767-9210786 None:intergenic 45.0%
! GTAAAGGGCATGGAGAGAAT+AGG - chr1_4:9210810-9210829 Msa0148780:five_prime_UTR 45.0%
TGGAGAGAATAGGAGTTCAG+AGG - chr1_4:9210820-9210839 Msa0148780:five_prime_UTR 45.0%
AATAGGAGTTCAGAGGCTTC+AGG - chr1_4:9210827-9210846 Msa0148780:five_prime_UTR 45.0%
ATAGGAGTTCAGAGGCTTCA+GGG - chr1_4:9210828-9210847 Msa0148780:five_prime_UTR 45.0%
AGTCCAACTTCTGTAGTCCT+TGG - chr1_4:9210860-9210879 Msa0148780:five_prime_UTR 45.0%
TCTCCAAGGACTACAGAAGT+TGG + chr1_4:9210866-9210885 None:intergenic 45.0%
ACCAAACATGGTACCGCGTT+AGG - chr1_4:9206738-9206757 Msa0148780:intron 50.0%
ACCTAACGCGGTACCATGTT+TGG + chr1_4:9206742-9206761 None:intergenic 50.0%
GCTTCGATAGGATGTCTGCT+AGG + chr1_4:9206882-9206901 None:intergenic 50.0%
!! AGGAGTGTCTGTGCTTCGAT+AGG + chr1_4:9206894-9206913 None:intergenic 50.0%
ATCGAAGCACAGACACTCCT+CGG - chr1_4:9206894-9206913 Msa0148780:intron 50.0%
TGTTGGACACGACCGACATT+GGG + chr1_4:9206931-9206950 None:intergenic 50.0%
ATGTTGGACACGACCGACAT+TGG + chr1_4:9206932-9206951 None:intergenic 50.0%
AGAGTCTGAGAGAGAGAGAG+AGG - chr1_4:9207211-9207230 Msa0148780:CDS 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr1_4:9207695-9207714 None:intergenic 50.0%
GTCAATTATACCGGGACGGA+GGG - chr1_4:9207891-9207910 Msa0148780:CDS 50.0%
ATTACATACTCCCTCCGTCC+CGG + chr1_4:9207904-9207923 None:intergenic 50.0%
CTACTTTCACTACACCCTGG+TGG + chr1_4:9208365-9208384 None:intergenic 50.0%
! GTGAAAGTAGTTGGTGCGCA+TGG - chr1_4:9208375-9208394 Msa0148780:intron 50.0%
! TAGTTGGTGCGCATGGTATG+TGG - chr1_4:9208382-9208401 Msa0148780:intron 50.0%
! AGTTGGTGCGCATGGTATGT+GGG - chr1_4:9208383-9208402 Msa0148780:intron 50.0%
TACTTGGACGATTTCCCTGG+TGG - chr1_4:9208941-9208960 Msa0148780:intron 50.0%
! CGGAGTACCTTGAGATGACA+GGG - chr1_4:9209053-9209072 Msa0148780:intron 50.0%
! GGAGTACCTTGAGATGACAG+GGG - chr1_4:9209054-9209073 Msa0148780:intron 50.0%
ATCTCTTCTCCCTTGGTCTG+AGG - chr1_4:9209177-9209196 Msa0148780:intron 50.0%
AGTCTGTTCCGAAGGATTGG+TGG - chr1_4:9209350-9209369 Msa0148780:intron 50.0%
! GTCTGTTCCGAAGGATTGGT+GGG - chr1_4:9209351-9209370 Msa0148780:intron 50.0%
TCCTCAACCCACCAATCCTT+CGG + chr1_4:9209361-9209380 None:intergenic 50.0%
!! TTGCCGTGTGATAACGGTGT+TGG - chr1_4:9209577-9209596 Msa0148780:intron 50.0%
!! TCCACTTCGAGTTGTAGTGC+AGG - chr1_4:9210502-9210521 Msa0148780:intron 50.0%
ACCTGCACTACAACTCGAAG+TGG + chr1_4:9210506-9210525 None:intergenic 50.0%
CGAGGAATGCGAGAAAACTC+TGG - chr1_4:9210616-9210635 Msa0148780:intron 50.0%
! ATGGTACCGCGTTAGGTTGC+CGG - chr1_4:9206745-9206764 Msa0148780:intron 55.0%
GTGATTCCGGCAACCTAACG+CGG + chr1_4:9206754-9206773 None:intergenic 55.0%
! GCGTTAGGTTGCCGGAATCA+CGG - chr1_4:9206753-9206772 Msa0148780:intron 55.0%
! TTAGGTTGCCGGAATCACGG+TGG - chr1_4:9206756-9206775 Msa0148780:intron 55.0%
ACTGCTAGCCACCGTGATTC+CGG + chr1_4:9206767-9206786 None:intergenic 55.0%
GTCTATTACTCCCTCCGTCC+CGG - chr1_4:9207678-9207697 Msa0148780:CDS 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr1_4:9207691-9207710 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG - chr1_4:9207890-9207909 Msa0148780:CDS 55.0%
GTTGGTGCGCATGGTATGTG+GGG - chr1_4:9208384-9208403 Msa0148780:intron 55.0%
! GCGGAGTACCTTGAGATGAC+AGG - chr1_4:9209052-9209071 Msa0148780:intron 55.0%
!! TCCGAAGGATTGGTGGGTTG+AGG - chr1_4:9209357-9209376 Msa0148780:intron 55.0%
!! GGACGGTGTTGTGATTGGTG+AGG - chr1_4:9209447-9209466 Msa0148780:intron 55.0%
TGATTCCGGCTAGGTCTCCT+GGG - chr1_4:9209728-9209747 Msa0148780:intron 55.0%
GTAATCCCAGGAGACCTAGC+CGG + chr1_4:9209736-9209755 None:intergenic 55.0%
GTTAGCAAATGCTCGGGCAC+TGG + chr1_4:9210558-9210577 None:intergenic 55.0%
AGGGCATGTGGAGGATTGTG+TGG + chr1_4:9210584-9210603 None:intergenic 55.0%
GCATGCAGTTGTTGCCGTCT+CGG - chr1_4:9210750-9210769 Msa0148780:intron 55.0%
GGTCAGTTATTCCGGGACGG+AGG + chr1_4:9207692-9207711 None:intergenic 60.0%
! CGATTTCCCTGGTGGACCCA+AGG - chr1_4:9208949-9208968 Msa0148780:intron 60.0%
CAAAGGCCTTGGGTCCACCA+GGG + chr1_4:9208958-9208977 None:intergenic 60.0%
TCAAAGGCCTTGGGTCCACC+AGG + chr1_4:9208959-9208978 None:intergenic 60.0%
TGTGGCTGCTCGATGTGCAG+CGG - chr1_4:9209033-9209052 Msa0148780:intron 60.0%
CTGATTCCGGCTAGGTCTCC+TGG - chr1_4:9209727-9209746 Msa0148780:intron 60.0%
AGTTGTTGCCGTCTCGGTCG+AGG - chr1_4:9210756-9210775 Msa0148780:intron 60.0%
CGGCGTCTCAGTGTCGTCTC+CGG - chr1_4:9207005-9207024 Msa0148780:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 9205846 9211138 9205846 ID=Msa0148780;Name=Msa0148780
chr1_4 mRNA 9205846 9211138 9205846 ID=Msa0148780-mRNA-1;Parent=Msa0148780;Name=Msa0148780-mRNA-1;_AED=0.02;_eAED=0.02;_QI=390|1|1|1|0.75|0.6|5|201|617
chr1_4 exon 9205846 9206589 9205846 ID=Msa0148780-mRNA-1:exon:3906;Parent=Msa0148780-mRNA-1
chr1_4 exon 9206940 9208118 9206940 ID=Msa0148780-mRNA-1:exon:3905;Parent=Msa0148780-mRNA-1
chr1_4 exon 9208205 9208274 9208205 ID=Msa0148780-mRNA-1:exon:3904;Parent=Msa0148780-mRNA-1
chr1_4 exon 9210643 9210718 9210643 ID=Msa0148780-mRNA-1:exon:3903;Parent=Msa0148780-mRNA-1
chr1_4 exon 9210763 9211138 9210763 ID=Msa0148780-mRNA-1:exon:3902;Parent=Msa0148780-mRNA-1
chr1_4 five_prime_UTR 9210763 9211138 9210763 ID=Msa0148780-mRNA-1:five_prime_utr;Parent=Msa0148780-mRNA-1
chr1_4 five_prime_UTR 9210705 9210718 9210705 ID=Msa0148780-mRNA-1:five_prime_utr;Parent=Msa0148780-mRNA-1
chr1_4 CDS 9210643 9210704 9210643 ID=Msa0148780-mRNA-1:cds;Parent=Msa0148780-mRNA-1
chr1_4 CDS 9208205 9208274 9208205 ID=Msa0148780-mRNA-1:cds;Parent=Msa0148780-mRNA-1
chr1_4 CDS 9206940 9208118 9206940 ID=Msa0148780-mRNA-1:cds;Parent=Msa0148780-mRNA-1
chr1_4 CDS 9206047 9206589 9206047 ID=Msa0148780-mRNA-1:cds;Parent=Msa0148780-mRNA-1
chr1_4 three_prime_UTR 9205846 9206046 9205846 ID=Msa0148780-mRNA-1:three_prime_utr;Parent=Msa0148780-mRNA-1
Gene Sequence

>Msa0148780

ATGAAGTTTATGAAGTTGGGTTCGAAGCCTGATGCACTTCAATCTGATGGCAAATTTGTCAGGTACATATCATCTGAATTAGCTACAGATATTATCATAGCTATTGGTGATGTAAAGTTTGACCTTCACAAGTTCCCTCTACTGTCAAAGAGCAATCGCTTACAGAAGTTGGTGTCAAAGGCTAACGAAGATAATTCAGATGAAATTTACTTGGACGATTTCCCTGGTGGACCCAAGGCCTTTGAAATATGTGCAAAGTTCTGCTATGGAATGACTGTGACTCTGAATGCTTACAATGTTGTGGCTGCTCGATGTGCAGCGGAGTACCTTGAGATGACAGGGGATATTGATAAAGGAAATTTGATTTTTAAAATTGATGTGTTCCTTACATCAAGTATCTTTCGTAGCTGGAAGGATTCTATAATTGTTCTTCAAACTGCTAAATCTCTTCTCCCTTGGTCTGAGGATCTAAAGATAATTGGGAGATGCATAGATTCCATAGCATCAAAAACTTCTGTTGATCCGGCAAACATCACTTGGTCTTACACTTACAACCGAAAATTAACACAGGTCGATAAAGTCGTTGAGGACAAGATAACATTGAAAGAGAAAATTGAGTCTGTTCCGAAGGATTGGTGGGTTGAGGATATATGTGAGCTGGACATTGATCTTTATAAACGCGTAATGATAACGGTGAAATCTAAGGGAAGAATGGACGGTGTTGTGATTGGTGAGGCGCTGAAAACCTATGCTGTTAGATGGTTGCCTGATTCTGTTGATGCATTGGTTTCTGATGCTCATGCATGGAGGAACAAATCTCTGGTAGAAACAATTGTGTGTTTATTGCCGTGTGATAACGGTGTTGGTTGTTCCTGTAGTTTCTTGCTGAAACTATTTAAAGTGGCCATACTGGTTGAAGCCGATGAATCATCCAGAGAAGAATTGATGAACAGCATCAGCTTAAAATTGCATGAAGCTTCTGTCAAGGATTTACTGATTCCGGCTAGGTCTCCTGGGATTACTACTTATGATATTGATTTGGTGCAAGATCTTTTGAATCGATACATGACTAACGAAAAGAAAAAGCGTGATATTGAGGTTACAGATATGAAAGATAAAGTATTTGGTGAATCTATTTTAGGGAATAGGGCGATATTGAATCTCGGCAAGTTGGTTGATAGTTATCTTGGAGAAATTGCACATGATCCTAATCTTAGCCTCTCTAGTTTTGTTGATTTGTCAGAGTCAATTCCAGATTTTGCTAGACCAAATCATGACGGTTTGTACAGAGCCATCGATATCTACTTGAAGGAACACCCAAGTTTGACAAAATCTGAAAAGAAGAACATATGTGGACTGATGAATGTCAAGAAATTGACTGCTGATGCATCGGCGCATGCTGCACAGAACGAACGTCTTCCACTTCGAGTTGTAGTGCAGGTTCTGTATTTTGAACAAGTTAGAGCTGCAGCCAGTGCCCGAGCATTTGCTAACAGTCCACACAATCCTCCACATGCCCTAATAAATGGAGACGAGGAATGCGAGAAAACTCTGGGAGTGAGCTGCCATTCCCTCAACAGACAAACAAGTCGTTTGAAGATTAAAGACGATGAGTTTCGTAAGAGTGTGAGATTGGATAAAAAGAGTAGCAAAAATAGCAGAAGTGGCATGCAGTTGTTGCCGTCTCGGTCGAGGAGAATATTTGACAAGTTATGGAATGTTGGTAGTAAAGGGCATGGAGAGAATAGGAGTTCAGAGGCTTCAGGGAGTTCTAATAGTCCAACTTCTGTAGTCCTTGGAGATACAAAATCTTCTGGTTCATCCTTAAGACACAAAAGACATTCTATCTCTTAG
Protein sequence

>Msa0148780

MKFMKLGSKPDALQSDGKFVRYISSELATDIIIAIGDVKFDLHKFPLLSKSNRLQKLVSKANEDNSDEIYLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTGDIDKGNLIFKIDVFLTSSIFRSWKDSIIVLQTAKSLLPWSEDLKIIGRCIDSIASKTSVDPANITWSYTYNRKLTQVDKVVEDKITLKEKIESVPKDWWVEDICELDIDLYKRVMITVKSKGRMDGVVIGEALKTYAVRWLPDSVDALVSDAHAWRNKSLVETIVCLLPCDNGVGCSCSFLLKLFKVAILVEADESSREELMNSISLKLHEASVKDLLIPARSPGITTYDIDLVQDLLNRYMTNEKKKRDIEVTDMKDKVFGESILGNRAILNLGKLVDSYLGEIAHDPNLSLSSFVDLSESIPDFARPNHDGLYRAIDIYLKEHPSLTKSEKKNICGLMNVKKLTADASAHAAQNERLPLRVVVQVLYFEQVRAAASARAFANSPHNPPHALINGDEECEKTLGVSCHSLNRQTSRLKIKDDEFRKSVRLDKKSSKNSRSGMQLLPSRSRRIFDKLWNVGSKGHGENRSSEASGSSNSPTSVVLGDTKSSGSSLRHKRHSIS*