AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1407800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1407800 MtrunA17_Chr8g0382261 94.429 359 17 2 1 359 1 356 0.0 661
Msa1407800 MtrunA17_Chr3g0124001 58.182 385 122 11 1 359 1 372 5.60e-139 399
Msa1407800 MtrunA17_Chr1g0186161 56.395 172 75 0 166 337 137 308 1.19e-62 202
Msa1407800 MtrunA17_Chr1g0168381 61.017 59 23 0 275 333 12 70 7.86e-14 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1407800 AT4G39870.2 48.762 404 151 8 1 359 1 393 6.62e-119 350
Msa1407800 AT4G39870.1 48.762 404 151 8 1 359 1 393 6.62e-119 350
Msa1407800 AT2G05590.2 55.000 180 81 0 163 342 122 301 5.47e-69 219
Msa1407800 AT2G05590.1 54.930 142 64 0 163 304 122 263 1.31e-52 175
Msa1407800 AT5G06260.2 28.931 159 100 5 196 344 173 328 8.05e-14 72.4
Msa1407800 AT5G06260.1 28.931 159 100 5 196 344 237 392 8.16e-14 72.8
Msa1407800 AT5G06260.3 28.931 159 100 5 196 344 148 303 1.15e-13 71.6

Find 119 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATGCGTTGCATACTTAA+AGG 0.172299 tig0023324:-65966 Msa1407800:three_prime_UTR
ACTTCCTTCACTTGAAATTC+TGG 0.230950 tig0023324:+66496 None:intergenic
GGTTTGTTATGGTCAGAAAT+AGG 0.233665 tig0023324:+69587 None:intergenic
GGTAGATGATGATGAGTTAA+AGG 0.279770 tig0023324:-69433 Msa1407800:CDS
TAGATTATGAATTATGATAA+AGG 0.297309 tig0023324:-69792 Msa1407800:five_prime_UTR
AGTTCGGTTTCCGAAACTTA+TGG 0.320071 tig0023324:-66541 Msa1407800:CDS
TATCACTTTCAACTCTTTAC+CGG 0.326685 tig0023324:-68824 Msa1407800:CDS
GCACTTCCGGCTTTAATTCA+TGG 0.329830 tig0023324:-68997 Msa1407800:CDS
ACATGCTTGTAAATATTTGC+AGG 0.331389 tig0023324:-66062 Msa1407800:three_prime_UTR
CAACCAATTTCTCATTCATT+TGG 0.340463 tig0023324:+69271 None:intergenic
TCAAGAAGGGATTGTTATCT+AGG 0.341466 tig0023324:-69248 Msa1407800:CDS
GTTTGTTATGGTCAGAAATA+GGG 0.345242 tig0023324:+69588 None:intergenic
TGCGGTTTATGATGCACTTC+CGG 0.349970 tig0023324:-69010 Msa1407800:CDS
TTGGCCTGGACCTAGTTTGC+TGG 0.351025 tig0023324:-68790 Msa1407800:intron
TGATCATTTGCCGGAAATAT+CGG 0.357645 tig0023324:-69067 Msa1407800:CDS
CAAAGCAGTTCACCTTGTTT+CGG 0.358183 tig0023324:-69633 Msa1407800:CDS
ACAAGGATTGCCATAAGTTT+CGG 0.368495 tig0023324:+66531 None:intergenic
TGACCAAATGAATGAGAAAT+TGG 0.373689 tig0023324:-69274 Msa1407800:CDS
CTTTAATTCATGGGAAGAAA+TGG 0.380374 tig0023324:-68987 Msa1407800:CDS
ATTGAAGGTTCCGATATTTC+CGG 0.382091 tig0023324:+69057 None:intergenic
CATATCAACTCAAGATTGAA+TGG 0.382180 tig0023324:-66568 Msa1407800:intron
AGATTATGAATTATGATAAA+GGG 0.382482 tig0023324:-69791 Msa1407800:five_prime_UTR
AGGAGCAGTGTTTGGTGGCT+TGG 0.413328 tig0023324:-67956 Msa1407800:CDS
AGAGGTTCCTAGTGTGCCTT+TGG 0.414757 tig0023324:-69094 Msa1407800:CDS
TAATGACGGTGAGGGAATAT+AGG 0.417137 tig0023324:-69764 Msa1407800:five_prime_UTR
AAGTTTCGTGCCTCAACAAC+CGG 0.428754 tig0023324:-69884 Msa1407800:five_prime_UTR
TTTGGTTGTTGATCATTTGC+CGG 0.432855 tig0023324:-69076 Msa1407800:CDS
TGTTGATTTCAAATAGTTTG+AGG 0.435731 tig0023324:-69035 Msa1407800:CDS
GACCGAAAAGGAGCAGTGTT+TGG 0.438263 tig0023324:-67964 Msa1407800:CDS
CTATTTGAAATCAACATTGA+AGG 0.441509 tig0023324:+69042 None:intergenic
CTTTGCAGCACATGGAAACA+TGG 0.442796 tig0023324:-68849 Msa1407800:intron
GCAGTAAACGACGACGTATC+AGG 0.445057 tig0023324:+69387 None:intergenic
ACCACTGACTTTCTAGCGAT+TGG 0.446127 tig0023324:-66734 Msa1407800:CDS
TTCTCTTGTTGGATGGTCGA+AGG 0.447351 tig0023324:+67923 None:intergenic
AAGATTGAATGGGTCAAGTT+CGG 0.451165 tig0023324:-66557 Msa1407800:CDS
TGAGAAATTGGTTGTCAAGA+AGG 0.453693 tig0023324:-69262 Msa1407800:CDS
TTTACCGGAGAAGTATGCTT+TGG 0.460274 tig0023324:-68809 Msa1407800:CDS
CAGGTTGTTGGAGACCGAAA+AGG 0.462680 tig0023324:-67976 Msa1407800:CDS
TTGCATGTTCAGTGTCAAAC+TGG 0.464030 tig0023324:+69999 None:intergenic
CTGAGTCATCATCGGTCACT+CGG 0.465381 tig0023324:+69943 None:intergenic
AATTATTGTTTAGGAAGAAA+AGG 0.466326 tig0023324:-69454 Msa1407800:intron
TGAAATTGTACCAGCAAACT+AGG 0.469728 tig0023324:+68780 None:intergenic
CGGAGAAGTATGCTTTGGCC+TGG 0.471135 tig0023324:-68804 Msa1407800:CDS
GATAAGATTGTGACTGCAGC+TGG 0.474335 tig0023324:-69306 Msa1407800:CDS
AGAAATGGTTAATGATGTAC+AGG 0.474691 tig0023324:-68972 Msa1407800:intron
AGTTCATACCCATTACAAAA+TGG 0.475573 tig0023324:-66021 Msa1407800:three_prime_UTR
CACTTCCGGCTTTAATTCAT+GGG 0.478819 tig0023324:-68996 Msa1407800:CDS
CCTGTCGTATATCGCCCAAC+AGG 0.479602 tig0023324:-67749 Msa1407800:intron
CAAGAAGGGATTGTTATCTA+GGG 0.481467 tig0023324:-69247 Msa1407800:CDS
TCTCTTGTTGGATGGTCGAA+GGG 0.489291 tig0023324:+67924 None:intergenic
ACTGACTTTCTAGCGATTGG+TGG 0.489834 tig0023324:-66731 Msa1407800:CDS
TATTTATCTATCTGCTAGAA+CGG 0.490298 tig0023324:-69205 Msa1407800:CDS
TCCCTTTCACGATCTTGTGT+TGG 0.491614 tig0023324:+69174 None:intergenic
GAGAAATTGGTTGTCAAGAA+GGG 0.491672 tig0023324:-69261 Msa1407800:CDS
ATTTATCTATCTGCTAGAAC+GGG 0.494505 tig0023324:-69204 Msa1407800:CDS
GACTTTCTAGCGATTGGTGG+GGG 0.501174 tig0023324:-66728 Msa1407800:CDS
GAGGACGAGAGGGTTTGTTA+TGG 0.508533 tig0023324:+69576 None:intergenic
TTCTCCAGAATTTCAAGTGA+AGG 0.510211 tig0023324:-66500 Msa1407800:CDS
GGGATAGATTTGAGTCTGAT+GGG 0.512274 tig0023324:-69155 Msa1407800:CDS
TTGAGCAAAACAGAGGCACC+TGG 0.517709 tig0023324:-66266 Msa1407800:CDS
AGGGATAGATTTGAGTCTGA+TGG 0.519127 tig0023324:-69156 Msa1407800:CDS
CTTTCCTCCATGCAGTTGTG+GGG 0.519234 tig0023324:-66326 Msa1407800:intron
TTCCAACACAAGATCGTGAA+AGG 0.521427 tig0023324:-69176 Msa1407800:CDS
AGGCACCTGGGATCTCTCGC+TGG 0.521785 tig0023324:-66253 Msa1407800:CDS
AATTGCAATTTCTGCTAGCA+AGG 0.522215 tig0023324:-66150 Msa1407800:three_prime_UTR
TTCTTCCCATGAATTAAAGC+CGG 0.528712 tig0023324:+68991 None:intergenic
CTGACTTTCTAGCGATTGGT+GGG 0.531876 tig0023324:-66730 Msa1407800:CDS
ATTGTGACTGCAGCTGGAGC+TGG 0.535852 tig0023324:-69300 Msa1407800:CDS
TGATAAAGGGATTGTAATGA+CGG 0.536835 tig0023324:-69778 Msa1407800:five_prime_UTR
CGAAAAGGAGCAGTGTTTGG+TGG 0.540629 tig0023324:-67961 Msa1407800:CDS
GATGTTGATGATTATGCTGC+CGG 0.544764 tig0023324:+69847 None:intergenic
ACCGGAAAACGCTTCTACAC+CGG 0.545063 tig0023324:-69866 Msa1407800:five_prime_UTR
ATATTTACAAGCATGTTACA+TGG 0.546363 tig0023324:+66069 None:intergenic
AATTGAGAACTTACTATGGA+AGG 0.547869 tig0023324:+69554 None:intergenic
ATATCAACTCAAGATTGAAT+GGG 0.549497 tig0023324:-66567 Msa1407800:intron
AGATTTGAGTCTGATGGGTG+TGG 0.549958 tig0023324:-69150 Msa1407800:CDS
TGTATTTCCTTCAAAACATG+AGG 0.552112 tig0023324:-66300 Msa1407800:CDS
TTCAAATAGTTTGAGGAATG+CGG 0.552777 tig0023324:-69028 Msa1407800:CDS
CAGGCCAAAGCATACTTCTC+CGG 0.555164 tig0023324:+68805 None:intergenic
TCAACAACCAAAGGCACACT+AGG 0.555535 tig0023324:+69087 None:intergenic
GAAAGTGAATCAGAGATTGA+AGG 0.560111 tig0023324:-69411 Msa1407800:CDS
CTCTTGTTGGATGGTCGAAG+GGG 0.562431 tig0023324:+67925 None:intergenic
TGAGTCTGATGGGTGTGGTG+TGG 0.567048 tig0023324:-69145 Msa1407800:CDS
CATGTTACATGGTGATAACA+TGG 0.568306 tig0023324:+66080 None:intergenic
TGTACCAGCAAACTAGGTCC+AGG 0.570453 tig0023324:+68786 None:intergenic
CATGCTTGTAAATATTTGCA+GGG 0.571962 tig0023324:-66061 Msa1407800:three_prime_UTR
GCATACTTAAAGGAAAATGA+AGG 0.574641 tig0023324:-65956 Msa1407800:three_prime_UTR
TTTGCAGCACATGGAAACAT+GGG 0.579278 tig0023324:-68848 Msa1407800:intron
ATTTCAAGTGAAGGAAGTAG+AGG 0.579766 tig0023324:-66491 Msa1407800:intron
TCCAACACAAGATCGTGAAA+GGG 0.580137 tig0023324:-69175 Msa1407800:CDS
TATCTATCTGCTAGAACGGG+TGG 0.584754 tig0023324:-69201 Msa1407800:CDS
AGGGATTGTAATGACGGTGA+GGG 0.585410 tig0023324:-69772 Msa1407800:five_prime_UTR
ATCCAACAAGAGAAAATACC+AGG 0.596747 tig0023324:-67914 Msa1407800:intron
AAGGGATTGTAATGACGGTG+AGG 0.597285 tig0023324:-69773 Msa1407800:five_prime_UTR
CAGTGGTGAGATCCGAAACA+AGG 0.598925 tig0023324:+69621 None:intergenic
TGGTGCAAAGTGTGAAGTAA+CGG 0.599281 tig0023324:+66753 None:intergenic
ATTTACCAGCGAGAGATCCC+AGG 0.600370 tig0023324:+66248 None:intergenic
TGACTTTCTAGCGATTGGTG+GGG 0.600382 tig0023324:-66729 Msa1407800:CDS
ATTGCAATTTCTGCTAGCAA+GGG 0.601315 tig0023324:-66149 Msa1407800:three_prime_UTR
TGACACTGAACATGCAAACA+AGG 0.602248 tig0023324:-69993 Msa1407800:five_prime_UTR
CCTGTTGGGCGATATACGAC+AGG 0.602267 tig0023324:+67749 None:intergenic
GGCAAATGATCAACAACCAA+AGG 0.615389 tig0023324:+69078 None:intergenic
AAATGAGTCACAAAATGATG+TGG 0.619732 tig0023324:+65929 None:intergenic
TGAGCAAAACAGAGGCACCT+GGG 0.621947 tig0023324:-66265 Msa1407800:CDS
TCAGTAAAATGCGAACTGCA+AGG 0.623392 tig0023324:+66195 None:intergenic
TCTGGAGAATGTGCTAAACA+AGG 0.634055 tig0023324:+66514 None:intergenic
ACTATGGAAGGAGGACGAGA+GGG 0.634975 tig0023324:+69566 None:intergenic
TACTATGGAAGGAGGACGAG+AGG 0.638442 tig0023324:+69565 None:intergenic
ACTAAAATTGAGCAAAACAG+AGG 0.638548 tig0023324:-66273 Msa1407800:CDS
ACCAATCGCTAGAAAGTCAG+TGG 0.645879 tig0023324:+66733 None:intergenic
AAGAAGGGATTGTTATCTAG+GGG 0.664052 tig0023324:-69246 Msa1407800:CDS
TGAGAACTTACTATGGAAGG+AGG 0.668946 tig0023324:+69557 None:intergenic
CTAGGAACCTCTTTCAACGG+CGG 0.671472 tig0023324:+69105 None:intergenic
ACACTAGGAACCTCTTTCAA+CGG 0.680780 tig0023324:+69102 None:intergenic
AATAGGGTTGAGAAGAACAG+TGG 0.691115 tig0023324:+69604 None:intergenic
TTACATGGTGATAACATGGG+TGG 0.696576 tig0023324:+66084 None:intergenic
AGTCATCATCGGTCACTCGG+CGG 0.705390 tig0023324:+69946 None:intergenic
ATGTTACATGGTGATAACAT+GGG 0.733161 tig0023324:+66081 None:intergenic
ATTATCTCTAGAATCCGACG+AGG 0.791211 tig0023324:+69341 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAAAAAATAATTAAA+CGG - tig0023324:66146-66165 Msa1407800:three_prime_UTR 0.0%
!! TGTATATTAAATTATTGTTT+AGG - tig0023324:66417-66436 Msa1407800:intron 10.0%
!!! TTTTAATTTTAAATGAAGTA+TGG - tig0023324:68810-68829 Msa1407800:CDS 10.0%
!!! ATTTTGTTTAGAATAAAAAT+TGG - tig0023324:69885-69904 Msa1407800:five_prime_UTR 10.0%
!! TAGATTATGAATTATGATAA+AGG - tig0023324:66088-66107 Msa1407800:three_prime_UTR 15.0%
!! AGATTATGAATTATGATAAA+GGG - tig0023324:66089-66108 Msa1407800:three_prime_UTR 15.0%
!! ATTAAAAAATAATTAAACGG+TGG - tig0023324:66149-66168 Msa1407800:three_prime_UTR 15.0%
!!! TTTTTTCTATTCCTATTTTT+AGG + tig0023324:66198-66217 None:intergenic 15.0%
!! ACTGTAATTTATTGAATATA+TGG - tig0023324:67376-67395 Msa1407800:intron 15.0%
!! TGTATTACTAAATCAATAAT+AGG - tig0023324:68272-68291 Msa1407800:intron 15.0%
!! GATGATATTATAATTATAGA+GGG + tig0023324:69261-69280 None:intergenic 15.0%
!! TGATGATATTATAATTATAG+AGG + tig0023324:69262-69281 None:intergenic 15.0%
!! AATTGCAACAAAAAAAAATT+AGG + tig0023324:69286-69305 None:intergenic 15.0%
!!! TTTTTTTTTGTTGCAATTTT+TGG - tig0023324:69288-69307 Msa1407800:CDS 15.0%
!! GTTGTTGTAATAATAAAAAG+AGG + tig0023324:66063-66082 None:intergenic 20.0%
!!! TATTCCTATTTTTAGGAATT+AGG + tig0023324:66191-66210 None:intergenic 20.0%
!! ATAGGAATAGAAAAAAGAAA+TGG - tig0023324:66202-66221 Msa1407800:three_prime_UTR 20.0%
!! TAGGAATAGAAAAAAGAAAT+GGG - tig0023324:66203-66222 Msa1407800:three_prime_UTR 20.0%
!! AATTATTGTTTAGGAAGAAA+AGG - tig0023324:66426-66445 Msa1407800:intron 20.0%
!! AAATAGCTAACAATACATTA+AGG + tig0023324:67879-67898 None:intergenic 20.0%
!! AAAATTAACATTGTTGCAAA+GGG + tig0023324:68031-68050 None:intergenic 20.0%
!! TAAAATTAACATTGTTGCAA+AGG + tig0023324:68032-68051 None:intergenic 20.0%
!!! AATTATCAGTTTTAATGACA+TGG - tig0023324:68401-68420 Msa1407800:intron 20.0%
!!! TTTTTCTTTCTATAATCATG+TGG + tig0023324:69023-69042 None:intergenic 20.0%
!! ATTATAGAAAGAAAAAGTCT+GGG - tig0023324:69027-69046 Msa1407800:CDS 20.0%
!!! ATGATTTGTTTGATGAAAAA+AGG + tig0023324:69231-69250 None:intergenic 20.0%
!! ATATTATAATTATAGAGGGA+AGG + tig0023324:69257-69276 None:intergenic 20.0%
!!! AAAATAGACCATTTTGTAAT+GGG + tig0023324:69870-69889 None:intergenic 20.0%
! GATTCCTAATTCCTAAAAAT+AGG - tig0023324:66184-66203 Msa1407800:three_prime_UTR 25.0%
! AGGAATAGAAAAAAGAAATG+GGG - tig0023324:66204-66223 Msa1407800:three_prime_UTR 25.0%
! TGCAATTAAAGCTATAATCT+AGG + tig0023324:66354-66373 None:intergenic 25.0%
! TATTTATCTATCTGCTAGAA+CGG - tig0023324:66675-66694 Msa1407800:intron 25.0%
!! CTATTTGAAATCAACATTGA+AGG + tig0023324:66841-66860 None:intergenic 25.0%
!!! TGTTGATTTCAAATAGTTTG+AGG - tig0023324:66845-66864 Msa1407800:intron 25.0%
! AAAGTAAGAAAGAACAAACA+TGG + tig0023324:67150-67169 None:intergenic 25.0%
!! TAGACAATTTGATAATCTCT+AGG - tig0023324:67172-67191 Msa1407800:intron 25.0%
!! AGACAATTTGATAATCTCTA+GGG - tig0023324:67173-67192 Msa1407800:intron 25.0%
! AATGGAACAAAAATATGTGT+AGG + tig0023324:67430-67449 None:intergenic 25.0%
! ATCTATAGCTCAATTCTAAA+TGG + tig0023324:67448-67467 None:intergenic 25.0%
! CAACATGGTCTATTATTAAA+TGG + tig0023324:67519-67538 None:intergenic 25.0%
! CATTTAATAATAGACCATGT+TGG - tig0023324:67517-67536 Msa1407800:intron 25.0%
! TTGTAATTAATAGTAGCACA+CGG - tig0023324:67699-67718 Msa1407800:intron 25.0%
! TTCTCTTTGCAGATTAAAAT+TGG + tig0023324:67794-67813 None:intergenic 25.0%
!!! ATTGTTAGCTATTTTTTTCC+AGG - tig0023324:67885-67904 Msa1407800:intron 25.0%
!! TGTTGACATAAATTTTGTAC+AGG - tig0023324:68067-68086 Msa1407800:intron 25.0%
!! GTTGACATAAATTTTGTACA+GGG - tig0023324:68068-68087 Msa1407800:intron 25.0%
! AAAAAAGAGATATACCTGTT+GGG + tig0023324:68148-68167 None:intergenic 25.0%
! AAAAAAAGAGATATACCTGT+TGG + tig0023324:68149-68168 None:intergenic 25.0%
!!! CTTTTGTTGTCATAGTTATA+CGG - tig0023324:68201-68220 Msa1407800:intron 25.0%
!! TTTCCTTTTACAAAACTATG+TGG - tig0023324:68337-68356 Msa1407800:intron 25.0%
!! TTTTCAAACCCAAAAAATGA+GGG + tig0023324:68548-68567 None:intergenic 25.0%
!!! TTTTTCAAACCCAAAAAATG+AGG + tig0023324:68549-68568 None:intergenic 25.0%
!! CTAGATATAATTTTACCTCA+AGG - tig0023324:68715-68734 Msa1407800:intron 25.0%
! ATCTTAATGTACTGTTAGAA+AGG - tig0023324:68745-68764 Msa1407800:intron 25.0%
!! ATATTGCATCATCTTTTTGT+GGG + tig0023324:68876-68895 None:intergenic 25.0%
!! AATATTGCATCATCTTTTTG+TGG + tig0023324:68877-68896 None:intergenic 25.0%
! GATTATAGAAAGAAAAAGTC+TGG - tig0023324:69026-69045 Msa1407800:CDS 25.0%
! ATATCAACTCAAGATTGAAT+GGG - tig0023324:69313-69332 Msa1407800:CDS 25.0%
! AAATGTTTCGTACATCAATA+AGG + tig0023324:69507-69526 None:intergenic 25.0%
! ATATTTACAAGCATGTTACA+TGG + tig0023324:69814-69833 None:intergenic 25.0%
!! CAAAATAGACCATTTTGTAA+TGG + tig0023324:69871-69890 None:intergenic 25.0%
TGATAAAGGGATTGTAATGA+CGG - tig0023324:66102-66121 Msa1407800:three_prime_UTR 30.0%
!! GTTTGTTATGGTCAGAAATA+GGG + tig0023324:66295-66314 None:intergenic 30.0%
AATTGAGAACTTACTATGGA+AGG + tig0023324:66329-66348 None:intergenic 30.0%
GGTTAATTGAGAACTTACTA+TGG + tig0023324:66333-66352 None:intergenic 30.0%
TGACCAAATGAATGAGAAAT+TGG - tig0023324:66606-66625 Msa1407800:intron 30.0%
CAACCAATTTCTCATTCATT+TGG + tig0023324:66612-66631 None:intergenic 30.0%
ATTTATCTATCTGCTAGAAC+GGG - tig0023324:66676-66695 Msa1407800:intron 30.0%
TTCAAATAGTTTGAGGAATG+CGG - tig0023324:66852-66871 Msa1407800:intron 30.0%
CTTTAATTCATGGGAAGAAA+TGG - tig0023324:66893-66912 Msa1407800:intron 30.0%
AGAAATGGTTAATGATGTAC+AGG - tig0023324:66908-66927 Msa1407800:intron 30.0%
! TAATGATGTACAGGTAGTTT+TGG - tig0023324:66917-66936 Msa1407800:intron 30.0%
! TTTTGGATTAAGGCTTTTGA+AGG - tig0023324:66934-66953 Msa1407800:intron 30.0%
TATCACTTTCAACTCTTTAC+CGG - tig0023324:67056-67075 Msa1407800:intron 30.0%
TTATTTAAATACCCGACATG+AGG - tig0023324:67267-67286 Msa1407800:intron 30.0%
! AGAAGCTAAGAAACAACTTT+TGG - tig0023324:67335-67354 Msa1407800:intron 30.0%
! GAAGCTAAGAAACAACTTTT+GGG - tig0023324:67336-67355 Msa1407800:intron 30.0%
!!! TAAGAAACAACTTTTGGGTT+TGG - tig0023324:67341-67360 Msa1407800:intron 30.0%
CCTTGCATAACAATAATATG+TGG + tig0023324:67481-67500 None:intergenic 30.0%
CCACATATTATTGTTATGCA+AGG - tig0023324:67478-67497 Msa1407800:intron 30.0%
TAAATCACTGTAAACCAACA+TGG + tig0023324:67534-67553 None:intergenic 30.0%
CAATGTGATGAACATGAAAT+GGG + tig0023324:67570-67589 None:intergenic 30.0%
TCAATGTGATGAACATGAAA+TGG + tig0023324:67571-67590 None:intergenic 30.0%
TACAAAAATAAAACCAGACC+TGG + tig0023324:67987-68006 None:intergenic 30.0%
!! TTTGTTTTCACAAACATCTC+TGG - tig0023324:68104-68123 Msa1407800:intron 30.0%
!!! CATCCACATAGTTTTGTAAA+AGG + tig0023324:68343-68362 None:intergenic 30.0%
TTTACAAAACTATGTGGATG+AGG - tig0023324:68343-68362 Msa1407800:intron 30.0%
! AACATGATGCTTTTGTAACT+TGG - tig0023324:68490-68509 Msa1407800:intron 30.0%
! TTTGGGTTTGAAAAATCAGA+AGG - tig0023324:68554-68573 Msa1407800:intron 30.0%
GCAAATTGCAATATATCCTT+TGG + tig0023324:68623-68642 None:intergenic 30.0%
TATATTGCAATTTGCCATTG+AGG - tig0023324:68628-68647 Msa1407800:intron 30.0%
!! ATTAAGATGAATTAGCCTTG+AGG + tig0023324:68733-68752 None:intergenic 30.0%
TGAATTAACCACAATATTGC+AGG - tig0023324:69098-69117 Msa1407800:CDS 30.0%
CATATCAACTCAAGATTGAA+TGG - tig0023324:69312-69331 Msa1407800:CDS 30.0%
TGTATTTCCTTCAAAACATG+AGG - tig0023324:69580-69599 Msa1407800:CDS 30.0%
ACTAAAATTGAGCAAAACAG+AGG - tig0023324:69607-69626 Msa1407800:CDS 30.0%
ATGTTACATGGTGATAACAT+GGG + tig0023324:69802-69821 None:intergenic 30.0%
ACATGCTTGTAAATATTTGC+AGG - tig0023324:69818-69837 Msa1407800:five_prime_UTR 30.0%
CATGCTTGTAAATATTTGCA+GGG - tig0023324:69819-69838 Msa1407800:five_prime_UTR 30.0%
AGTTCATACCCATTACAAAA+TGG - tig0023324:69859-69878 Msa1407800:five_prime_UTR 30.0%
TTTATGCGTTGCATACTTAA+AGG - tig0023324:69914-69933 Msa1407800:five_prime_UTR 30.0%
GCATACTTAAAGGAAAATGA+AGG - tig0023324:69924-69943 Msa1407800:five_prime_UTR 30.0%
AAATGAGTCACAAAATGATG+TGG + tig0023324:69954-69973 None:intergenic 30.0%
TGGGGAAAAAGCAATCTTTA+CGG - tig0023324:66222-66241 Msa1407800:three_prime_UTR 35.0%
!! GGTTTGTTATGGTCAGAAAT+AGG + tig0023324:66296-66315 None:intergenic 35.0%
! GGTAGATGATGATGAGTTAA+AGG - tig0023324:66447-66466 Msa1407800:intron 35.0%
GAAAGTGAATCAGAGATTGA+AGG - tig0023324:66469-66488 Msa1407800:intron 35.0%
TGAGAAATTGGTTGTCAAGA+AGG - tig0023324:66618-66637 Msa1407800:intron 35.0%
GAGAAATTGGTTGTCAAGAA+GGG - tig0023324:66619-66638 Msa1407800:intron 35.0%
TCAAGAAGGGATTGTTATCT+AGG - tig0023324:66632-66651 Msa1407800:intron 35.0%
CAAGAAGGGATTGTTATCTA+GGG - tig0023324:66633-66652 Msa1407800:intron 35.0%
AAGAAGGGATTGTTATCTAG+GGG - tig0023324:66634-66653 Msa1407800:intron 35.0%
TTTGGTTGTTGATCATTTGC+CGG - tig0023324:66804-66823 Msa1407800:intron 35.0%
TGATCATTTGCCGGAAATAT+CGG - tig0023324:66813-66832 Msa1407800:intron 35.0%
ATTGAAGGTTCCGATATTTC+CGG + tig0023324:66826-66845 None:intergenic 35.0%
TTCTTCCCATGAATTAAAGC+CGG + tig0023324:66892-66911 None:intergenic 35.0%
!!! GTACAGGTAGTTTTGGATTA+AGG - tig0023324:66924-66943 Msa1407800:intron 35.0%
TGAAATTGTACCAGCAAACT+AGG + tig0023324:67103-67122 None:intergenic 35.0%
GATTGATAAATTGAGCTGCA+CGG - tig0023324:67204-67223 Msa1407800:intron 35.0%
ATGAAATATGCACCTCATGT+CGG + tig0023324:67282-67301 None:intergenic 35.0%
ACTGACATATGATTTCTGTC+TGG - tig0023324:67401-67420 Msa1407800:intron 35.0%
CTGACATATGATTTCTGTCT+GGG - tig0023324:67402-67421 Msa1407800:intron 35.0%
! ATCACATTGATGACTTCGTA+TGG - tig0023324:67581-67600 Msa1407800:intron 35.0%
!! AGAGGGGTATTTCAAAAGTT+GGG + tig0023324:67632-67651 None:intergenic 35.0%
!! AAGAGGGGTATTTCAAAAGT+TGG + tig0023324:67633-67652 None:intergenic 35.0%
ACAATATGCCATCAACAAGA+GGG + tig0023324:67649-67668 None:intergenic 35.0%
TACAATATGCCATCAACAAG+AGG + tig0023324:67650-67669 None:intergenic 35.0%
ACCAATAAGCTTGCAAACAT+GGG + tig0023324:67751-67770 None:intergenic 35.0%
AACCAATAAGCTTGCAAACA+TGG + tig0023324:67752-67771 None:intergenic 35.0%
! AACTCAGTCTTGCTGATTAA+AGG + tig0023324:67831-67850 None:intergenic 35.0%
!!! GCTATTTTTTTCCAGGTTGT+TGG - tig0023324:67892-67911 Msa1407800:intron 35.0%
! TGGTATTTTCTCTTGTTGGA+TGG + tig0023324:67967-67986 None:intergenic 35.0%
ATCCAACAAGAGAAAATACC+AGG - tig0023324:67966-67985 Msa1407800:CDS 35.0%
TTAATGACATGGTATCCACA+CGG - tig0023324:68412-68431 Msa1407800:intron 35.0%
! TGCTTTTGTAACTTGGAATC+TGG - tig0023324:68497-68516 Msa1407800:intron 35.0%
CATGACAATCCACAAATGTA+GGG + tig0023324:68582-68601 None:intergenic 35.0%
TCATGACAATCCACAAATGT+AGG + tig0023324:68583-68602 None:intergenic 35.0%
ATATATCCTTTGGCAAGATG+TGG + tig0023324:68613-68632 None:intergenic 35.0%
!! GTCTCTAAAGTCAACAGAAA+GGG + tig0023324:68666-68685 None:intergenic 35.0%
!! TGTCTCTAAAGTCAACAGAA+AGG + tig0023324:68667-68686 None:intergenic 35.0%
TTGAAACCATTAAAGATGCC+AGG + tig0023324:68779-68798 None:intergenic 35.0%
! TTTTTGTGGGCAACTTCAAT+AGG + tig0023324:68863-68882 None:intergenic 35.0%
TAGAAAGAAAAAGTCTGGGT+TGG - tig0023324:69031-69050 Msa1407800:CDS 35.0%
!! AGGTCATTTTGCGCTTTATT+TGG - tig0023324:69175-69194 Msa1407800:CDS 35.0%
!!! TCATTTTGCGCTTTATTTGG+AGG - tig0023324:69178-69197 Msa1407800:CDS 35.0%
!!! CATTTTGCGCTTTATTTGGA+GGG - tig0023324:69179-69198 Msa1407800:CDS 35.0%
AAGATTGAATGGGTCAAGTT+CGG - tig0023324:69323-69342 Msa1407800:CDS 35.0%
ACAAGGATTGCCATAAGTTT+CGG + tig0023324:69352-69371 None:intergenic 35.0%
! TTCTCCAGAATTTCAAGTGA+AGG - tig0023324:69380-69399 Msa1407800:CDS 35.0%
ACTTCCTTCACTTGAAATTC+TGG + tig0023324:69387-69406 None:intergenic 35.0%
! ATTTCAAGTGAAGGAAGTAG+AGG - tig0023324:69389-69408 Msa1407800:CDS 35.0%
ATTGATAAAAAGGGGGGAAA+AGG + tig0023324:69460-69479 None:intergenic 35.0%
GAACAGATTGATAAAAAGGG+GGG + tig0023324:69466-69485 None:intergenic 35.0%
GGAACAGATTGATAAAAAGG+GGG + tig0023324:69467-69486 None:intergenic 35.0%
CGGAACAGATTGATAAAAAG+GGG + tig0023324:69468-69487 None:intergenic 35.0%
CCGGAACAGATTGATAAAAA+GGG + tig0023324:69469-69488 None:intergenic 35.0%
! CCCTTTTTATCAATCTGTTC+CGG - tig0023324:69466-69485 Msa1407800:intron 35.0%
TGTTTCGTACATCAATAAGG+AGG + tig0023324:69504-69523 None:intergenic 35.0%
!! AGTATCTCCTCATGTTTTGA+AGG + tig0023324:69590-69609 None:intergenic 35.0%
AATTGCAATTTCTGCTAGCA+AGG - tig0023324:69730-69749 Msa1407800:five_prime_UTR 35.0%
ATTGCAATTTCTGCTAGCAA+GGG - tig0023324:69731-69750 Msa1407800:five_prime_UTR 35.0%
CATGTTACATGGTGATAACA+TGG + tig0023324:69803-69822 None:intergenic 35.0%
TTGCATGTTCAGTGTCAAAC+TGG + tig0023324:65884-65903 None:intergenic 40.0%
TGACACTGAACATGCAAACA+AGG - tig0023324:65887-65906 Msa1407800:three_prime_UTR 40.0%
!! TCGCTTTTCTGAGTCATCAT+CGG + tig0023324:65948-65967 None:intergenic 40.0%
!! GATGTTGATGATTATGCTGC+CGG + tig0023324:66036-66055 None:intergenic 40.0%
TAATGACGGTGAGGGAATAT+AGG - tig0023324:66116-66135 Msa1407800:three_prime_UTR 40.0%
! CAAAGCAGTTCACCTTGTTT+CGG - tig0023324:66247-66266 Msa1407800:exon 40.0%
AATAGGGTTGAGAAGAACAG+TGG + tig0023324:66279-66298 None:intergenic 40.0%
TGAGAACTTACTATGGAAGG+AGG + tig0023324:66326-66345 None:intergenic 40.0%
!! TTCATTTTTGTCGTCCTCGT+CGG - tig0023324:66525-66544 Msa1407800:CDS 40.0%
!! ATTATCTCTAGAATCCGACG+AGG + tig0023324:66542-66561 None:intergenic 40.0%
TTCCAACACAAGATCGTGAA+AGG - tig0023324:66704-66723 Msa1407800:CDS 40.0%
TCCAACACAAGATCGTGAAA+GGG - tig0023324:66705-66724 Msa1407800:CDS 40.0%
AGGGATAGATTTGAGTCTGA+TGG - tig0023324:66724-66743 Msa1407800:CDS 40.0%
GGGATAGATTTGAGTCTGAT+GGG - tig0023324:66725-66744 Msa1407800:CDS 40.0%
ACACTAGGAACCTCTTTCAA+CGG + tig0023324:66781-66800 None:intergenic 40.0%
GGCAAATGATCAACAACCAA+AGG + tig0023324:66805-66824 None:intergenic 40.0%
! CACTTCCGGCTTTAATTCAT+GGG - tig0023324:66884-66903 Msa1407800:intron 40.0%
TTTGCAGCACATGGAAACAT+GGG - tig0023324:67032-67051 Msa1407800:intron 40.0%
! TTTACCGGAGAAGTATGCTT+TGG - tig0023324:67071-67090 Msa1407800:intron 40.0%
ACATGGATAACTCATTGTGC+TGG + tig0023324:67133-67152 None:intergenic 40.0%
TGAAATATGCACCTCATGTC+GGG + tig0023324:67281-67300 None:intergenic 40.0%
!!! GAAACAACTTTTGGGTTTGG+TGG - tig0023324:67344-67363 Msa1407800:intron 40.0%
GATGACTTCGTATGGATGAA+TGG - tig0023324:67589-67608 Msa1407800:intron 40.0%
TGAAATACCCCTCTTGTTGA+TGG - tig0023324:67638-67657 Msa1407800:intron 40.0%
CAATATGCCATCAACAAGAG+GGG + tig0023324:67648-67667 None:intergenic 40.0%
TAGTAGCACACGGAGTTTAA+CGG - tig0023324:67709-67728 Msa1407800:intron 40.0%
TCCCATGTTTGCAAGCTTAT+TGG - tig0023324:67747-67766 Msa1407800:intron 40.0%
GGTTAATAAGCTCATGCTGT+TGG - tig0023324:67768-67787 Msa1407800:CDS 40.0%
GTTCTACACTCTACATTCAG+TGG - tig0023324:67848-67867 Msa1407800:intron 40.0%
TACACTCTACATTCAGTGGT+TGG - tig0023324:67852-67871 Msa1407800:intron 40.0%
! GACCTGGTATTTTCTCTTGT+TGG + tig0023324:67971-67990 None:intergenic 40.0%
ACAAGAGAAAATACCAGGTC+TGG - tig0023324:67971-67990 Msa1407800:CDS 40.0%
TAATGACATGGTATCCACAC+GGG - tig0023324:68413-68432 Msa1407800:intron 40.0%
ATTGTACCACATCTTGCCAA+AGG - tig0023324:68604-68623 Msa1407800:intron 40.0%
GGAAATCAAGCTTTCCTCAA+TGG + tig0023324:68645-68664 None:intergenic 40.0%
GTTAGAAAGGATGAGTTTCC+TGG - tig0023324:68758-68777 Msa1407800:intron 40.0%
GAGTTTCCTGGCATCTTTAA+TGG - tig0023324:68770-68789 Msa1407800:intron 40.0%
!! AGAAAAAGTCTGGGTTGGTT+TGG - tig0023324:69036-69055 Msa1407800:CDS 40.0%
GGTTTACTCCTGCAATATTG+TGG + tig0023324:69109-69128 None:intergenic 40.0%
TGGTGCAAAGTGTGAAGTAA+CGG + tig0023324:69130-69149 None:intergenic 40.0%
AGTTCGGTTTCCGAAACTTA+TGG - tig0023324:69339-69358 Msa1407800:CDS 40.0%
TCTGGAGAATGTGCTAAACA+AGG + tig0023324:69369-69388 None:intergenic 40.0%
TAAAAAGGGGGGAAAAGGTT+GGG + tig0023324:69455-69474 None:intergenic 40.0%
ATAAAAAGGGGGGAAAAGGT+TGG + tig0023324:69456-69475 None:intergenic 40.0%
GCCGGAACAGATTGATAAAA+AGG + tig0023324:69470-69489 None:intergenic 40.0%
AAGGAGGTAAACAAATGAGC+CGG + tig0023324:69488-69507 None:intergenic 40.0%
TCAGTAAAATGCGAACTGCA+AGG + tig0023324:69688-69707 None:intergenic 40.0%
TTACATGGTGATAACATGGG+TGG + tig0023324:69799-69818 None:intergenic 40.0%
AAGTTTCGTGCCTCAACAAC+CGG - tig0023324:65996-66015 Msa1407800:three_prime_UTR 45.0%
AAGGGATTGTAATGACGGTG+AGG - tig0023324:66107-66126 Msa1407800:three_prime_UTR 45.0%
AGGGATTGTAATGACGGTGA+GGG - tig0023324:66108-66127 Msa1407800:three_prime_UTR 45.0%
GATAAGATTGTGACTGCAGC+TGG - tig0023324:66574-66593 Msa1407800:intron 45.0%
TATCTATCTGCTAGAACGGG+TGG - tig0023324:66679-66698 Msa1407800:intron 45.0%
TCCCTTTCACGATCTTGTGT+TGG + tig0023324:66709-66728 None:intergenic 45.0%
! AGATTTGAGTCTGATGGGTG+TGG - tig0023324:66730-66749 Msa1407800:CDS 45.0%
! TTTTCAACCGCCGTTGAAAG+AGG - tig0023324:66768-66787 Msa1407800:intron 45.0%
! TCAACAACCAAAGGCACACT+AGG + tig0023324:66796-66815 None:intergenic 45.0%
TGCGGTTTATGATGCACTTC+CGG - tig0023324:66870-66889 Msa1407800:intron 45.0%
! GCACTTCCGGCTTTAATTCA+TGG - tig0023324:66883-66902 Msa1407800:intron 45.0%
! TGTCGTTTCTTTGCAGCACA+TGG - tig0023324:67023-67042 Msa1407800:intron 45.0%
CTTTGCAGCACATGGAAACA+TGG - tig0023324:67031-67050 Msa1407800:intron 45.0%
GGATAACTCATTGTGCTGGA+GGG + tig0023324:67129-67148 None:intergenic 45.0%
TGGATAACTCATTGTGCTGG+AGG + tig0023324:67130-67149 None:intergenic 45.0%
CTGCACGGTAGATTAGAGAT+AGG - tig0023324:67219-67238 Msa1407800:intron 45.0%
!!! ACAACTTTTGGGTTTGGTGG+TGG - tig0023324:67347-67366 Msa1407800:intron 45.0%
!!! CAACTTTTGGGTTTGGTGGT+GGG - tig0023324:67348-67367 Msa1407800:intron 45.0%
AGTAGCACACGGAGTTTAAC+GGG - tig0023324:67710-67729 Msa1407800:intron 45.0%
! CACCAAACACTGCTCCTTTT+CGG + tig0023324:67921-67940 None:intergenic 45.0%
TCTCTTGTTGGATGGTCGAA+GGG + tig0023324:67959-67978 None:intergenic 45.0%
TTCTCTTGTTGGATGGTCGA+AGG + tig0023324:67960-67979 None:intergenic 45.0%
AACCCAAAAAATGAGGGCGA+CGG + tig0023324:68542-68561 None:intergenic 45.0%
!! TATCTCTGAGATTCAGCACG+AGG - tig0023324:68921-68940 Msa1407800:intron 45.0%
!! ACCACTGACTTTCTAGCGAT+TGG - tig0023324:69146-69165 Msa1407800:CDS 45.0%
ACCAATCGCTAGAAAGTCAG+TGG + tig0023324:69150-69169 None:intergenic 45.0%
! ACTGACTTTCTAGCGATTGG+TGG - tig0023324:69149-69168 Msa1407800:CDS 45.0%
! CTGACTTTCTAGCGATTGGT+GGG - tig0023324:69150-69169 Msa1407800:CDS 45.0%
! TGACTTTCTAGCGATTGGTG+GGG - tig0023324:69151-69170 Msa1407800:CDS 45.0%
GTTCATGTGTCTGTGAGTGA+GGG + tig0023324:69429-69448 None:intergenic 45.0%
AAAAAGGGGGGAAAAGGTTG+GGG + tig0023324:69454-69473 None:intergenic 45.0%
TCTTTCCTCCATGCAGTTGT+GGG - tig0023324:69553-69572 Msa1407800:intron 45.0%
CTGAGTCATCATCGGTCACT+CGG + tig0023324:65940-65959 None:intergenic 50.0%
!! GAAGCGTTTTCCGGTTGTTG+AGG + tig0023324:66009-66028 None:intergenic 50.0%
ACCGGAAAACGCTTCTACAC+CGG - tig0023324:66014-66033 Msa1407800:three_prime_UTR 50.0%
CAGTGGTGAGATCCGAAACA+AGG + tig0023324:66262-66281 None:intergenic 50.0%
!! GAGGACGAGAGGGTTTGTTA+TGG + tig0023324:66307-66326 None:intergenic 50.0%
ACTATGGAAGGAGGACGAGA+GGG + tig0023324:66317-66336 None:intergenic 50.0%
TACTATGGAAGGAGGACGAG+AGG + tig0023324:66318-66337 None:intergenic 50.0%
GCAGTAAACGACGACGTATC+AGG + tig0023324:66496-66515 None:intergenic 50.0%
CTAGGAACCTCTTTCAACGG+CGG + tig0023324:66778-66797 None:intergenic 50.0%
AGAGGTTCCTAGTGTGCCTT+TGG - tig0023324:66786-66805 Msa1407800:intron 50.0%
CAGGCCAAAGCATACTTCTC+CGG + tig0023324:67078-67097 None:intergenic 50.0%
TGTACCAGCAAACTAGGTCC+AGG + tig0023324:67097-67116 None:intergenic 50.0%
AACATGGGACTTCAACACGC+AGG + tig0023324:67736-67755 None:intergenic 50.0%
! CTTTTCGGTCTCCAACAACC+TGG + tig0023324:67906-67925 None:intergenic 50.0%
CAGGTTGTTGGAGACCGAAA+AGG - tig0023324:67904-67923 Msa1407800:intron 50.0%
GACCGAAAAGGAGCAGTGTT+TGG - tig0023324:67916-67935 Msa1407800:CDS 50.0%
CGAAAAGGAGCAGTGTTTGG+TGG - tig0023324:67919-67938 Msa1407800:CDS 50.0%
CTCTTGTTGGATGGTCGAAG+GGG + tig0023324:67958-67977 None:intergenic 50.0%
TGTGCACATCATAACCCGTG+TGG + tig0023324:68430-68449 None:intergenic 50.0%
AAAAAATGAGGGCGACGGGT+GGG + tig0023324:68537-68556 None:intergenic 50.0%
!!! ACCCGTCGCCCTCATTTTTT+GGG - tig0023324:68537-68556 Msa1407800:intron 50.0%
ACCCAAAAAATGAGGGCGAC+GGG + tig0023324:68541-68560 None:intergenic 50.0%
CAGAAGGCTCCCTACATTTG+TGG - tig0023324:68570-68589 Msa1407800:intron 50.0%
! GACTTTCTAGCGATTGGTGG+GGG - tig0023324:69152-69171 Msa1407800:CDS 50.0%
GGTTCATGTGTCTGTGAGTG+AGG + tig0023324:69430-69449 None:intergenic 50.0%
CTCTTTCCTCCATGCAGTTG+TGG - tig0023324:69552-69571 Msa1407800:intron 50.0%
CTTTCCTCCATGCAGTTGTG+GGG - tig0023324:69554-69573 Msa1407800:intron 50.0%
TACAAAGCCCCACAACTGCA+TGG + tig0023324:69564-69583 None:intergenic 50.0%
!! TTGAGCAAAACAGAGGCACC+TGG - tig0023324:69614-69633 Msa1407800:CDS 50.0%
!! TGAGCAAAACAGAGGCACCT+GGG - tig0023324:69615-69634 Msa1407800:CDS 50.0%
ATTTACCAGCGAGAGATCCC+AGG + tig0023324:69635-69654 None:intergenic 50.0%
AGTCATCATCGGTCACTCGG+CGG + tig0023324:65937-65956 None:intergenic 55.0%
!!! GCCGGTGTAGAAGCGTTTTC+CGG + tig0023324:66018-66037 None:intergenic 55.0%
ATTGTGACTGCAGCTGGAGC+TGG - tig0023324:66580-66599 Msa1407800:intron 55.0%
! TGAGTCTGATGGGTGTGGTG+TGG - tig0023324:66735-66754 Msa1407800:CDS 55.0%
! CGGAGAAGTATGCTTTGGCC+TGG - tig0023324:67076-67095 Msa1407800:intron 55.0%
! TTGGCCTGGACCTAGTTTGC+TGG - tig0023324:67090-67109 Msa1407800:intron 55.0%
! AGGAGCAGTGTTTGGTGGCT+TGG - tig0023324:67924-67943 Msa1407800:CDS 55.0%
CCTGTTGGGCGATATACGAC+AGG + tig0023324:68134-68153 None:intergenic 55.0%
CCTGTCGTATATCGCCCAAC+AGG - tig0023324:68131-68150 Msa1407800:intron 55.0%
CAAAAAATGAGGGCGACGGG+TGG + tig0023324:68538-68557 None:intergenic 55.0%
!!! CACCCGTCGCCCTCATTTTT+TGG - tig0023324:68536-68555 Msa1407800:intron 55.0%
! TTTCTAGCGATTGGTGGGGG+AGG - tig0023324:69155-69174 Msa1407800:CDS 55.0%
AAAGCCCCACAACTGCATGG+AGG + tig0023324:69561-69580 None:intergenic 55.0%
AAGGGGGGAAAAGGTTGGGG+AGG + tig0023324:69451-69470 None:intergenic 60.0%
AGGCACCTGGGATCTCTCGC+TGG - tig0023324:69627-69646 Msa1407800:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0023324 gene 65875 70027 65875 ID=Msa1407800;Name=Msa1407800
tig0023324 mRNA 65875 70027 65875 ID=Msa1407800-mRNA-1;Parent=Msa1407800;Name=Msa1407800-mRNA-1;_AED=0.09;_eAED=0.09;_QI=346|1|1|1|1|1|8|375|359
tig0023324 exon 65875 66333 65875 ID=Msa1407800-mRNA-1:exon:25293;Parent=Msa1407800-mRNA-1
tig0023324 exon 66492 66576 66492 ID=Msa1407800-mRNA-1:exon:25292;Parent=Msa1407800-mRNA-1
tig0023324 exon 66695 66782 66695 ID=Msa1407800-mRNA-1:exon:25291;Parent=Msa1407800-mRNA-1
tig0023324 exon 67750 67813 67750 ID=Msa1407800-mRNA-1:exon:25290;Parent=Msa1407800-mRNA-1
tig0023324 exon 67915 67995 67915 ID=Msa1407800-mRNA-1:exon:25289;Parent=Msa1407800-mRNA-1
tig0023324 exon 68791 68863 68791 ID=Msa1407800-mRNA-1:exon:25288;Parent=Msa1407800-mRNA-1
tig0023324 exon 68973 69463 68973 ID=Msa1407800-mRNA-1:exon:25287;Parent=Msa1407800-mRNA-1
tig0023324 exon 69568 70027 69568 ID=Msa1407800-mRNA-1:exon:25286;Parent=Msa1407800-mRNA-1
tig0023324 five_prime_UTR 69682 70027 69682 ID=Msa1407800-mRNA-1:five_prime_utr;Parent=Msa1407800-mRNA-1
tig0023324 CDS 69568 69681 69568 ID=Msa1407800-mRNA-1:cds;Parent=Msa1407800-mRNA-1
tig0023324 CDS 68973 69463 68973 ID=Msa1407800-mRNA-1:cds;Parent=Msa1407800-mRNA-1
tig0023324 CDS 68791 68863 68791 ID=Msa1407800-mRNA-1:cds;Parent=Msa1407800-mRNA-1
tig0023324 CDS 67915 67995 67915 ID=Msa1407800-mRNA-1:cds;Parent=Msa1407800-mRNA-1
tig0023324 CDS 67750 67813 67750 ID=Msa1407800-mRNA-1:cds;Parent=Msa1407800-mRNA-1
tig0023324 CDS 66695 66782 66695 ID=Msa1407800-mRNA-1:cds;Parent=Msa1407800-mRNA-1
tig0023324 CDS 66492 66576 66492 ID=Msa1407800-mRNA-1:cds;Parent=Msa1407800-mRNA-1
tig0023324 CDS 66250 66333 66250 ID=Msa1407800-mRNA-1:cds;Parent=Msa1407800-mRNA-1
tig0023324 three_prime_UTR 65875 66249 65875 ID=Msa1407800-mRNA-1:three_prime_utr;Parent=Msa1407800-mRNA-1
Gene Sequence

>Msa1407800

ATGGGGAAAAAGCAATCTTTACGGAGCAAAGCAGTTCACCTTGTTTCGGATCTCACCACTGTTCTTCTCAACCCTATTTCTGACCATAACAAACCCTCTCGTCCTCCTTCCATAGAAGAAAAGGTAGATGATGATGAGTTAAAGGAAAGTGAATCAGAGATTGAAGGACCTGATACGTCGTCGTTTACTGCATTCTTATATTCATTTTTGTCGTCCTCGTCGGATTCTAGAGATAATAATGCAAATGATGATAAGATTGTGACTGCAGCTGGAGCTGGTGATGACCAAATGAATGAGAAATTGGTTGTCAAGAAGGGATTGTTATCTAGGGGTAAACAATCACTTAAATCTATTTATCTATCTGCTAGAACGGGTGGATTTCCAACACAAGATCGTGAAAGGGATAGATTTGAGTCTGATGGGTGTGGTGTGGAGATGAAATGTTTTCAACCGCCGTTGAAAGAGGTTCCTAGTGTGCCTTTGGTTGTTGATCATTTGCCGGAAATATCGGAACCTTCAATGTTGATTTCAAATAGTTTGAGGAATGCGGTTTATGATGCACTTCCGGCTTTAATTCATGGGAAGAAATGGTTAATGATGTACAGCACATGGAAACATGGGATATCACTTTCAACTCTTTACCGGAGAAGTATGCTTTGGCCTGGACCTAGTTTGCTGGTTGTTGGAGACCGAAAAGGAGCAGTGTTTGGTGGCTTGGTTGAAGCACCCCTTCGACCATCCAACAAGAGAAAATACCAGGGAACAAACAGTACATTTGTTTTCACAAACATCTCTGGTCATCCTGTCGTATATCGCCCAACAGGAGTAAACCGTTACTTCACACTTTGCACCACTGACTTTCTAGCGATTGGTGGGGGAGGTCATTTTGCGCTTTATTTGGAGGGTGATCTATTGAATGGGTCAAGTTCGGTTTCCGAAACTTATGGCAATCCTTGTTTAGCACATTCTCCAGAATTTCAAGTGAAGGAAGTAGAGTTGTGGGGCTTTGTATTTCCTTCAAAACATGAGGAGATACTAAAATTGAGCAAAACAGAGGCACCTGGGATCTCTCGCTGGTAA
Protein sequence

>Msa1407800

MGKKQSLRSKAVHLVSDLTTVLLNPISDHNKPSRPPSIEEKVDDDELKESESEIEGPDTSSFTAFLYSFLSSSSDSRDNNANDDKIVTAAGAGDDQMNEKLVVKKGLLSRGKQSLKSIYLSARTGGFPTQDRERDRFESDGCGVEMKCFQPPLKEVPSVPLVVDHLPEISEPSMLISNSLRNAVYDALPALIHGKKWLMMYSTWKHGISLSTLYRRSMLWPGPSLLVVGDRKGAVFGGLVEAPLRPSNKRKYQGTNSTFVFTNISGHPVVYRPTGVNRYFTLCTTDFLAIGGGGHFALYLEGDLLNGSSSVSETYGNPCLAHSPEFQVKEVELWGFVFPSKHEEILKLSKTEAPGISRW*