AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0186950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186950 MtrunA17_Chr8g0381341 86.741 626 44 3 1 623 1 590 0.0 1033
Msa0186950 MtrunA17_Chr8g0381341 99.167 120 1 0 669 788 542 661 3.41e-73 251
Msa0186950 MtrunA17_Chr5g0419511 56.627 83 1 1 474 556 34 81 2.80e-17 77.4
Msa0186950 MtrunA17_Chr1g0203001 51.724 87 41 1 671 757 342 427 9.73e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186950 AT1G24560.1 51.495 602 232 9 4 582 2 566 6.46e-176 521
Msa0186950 AT1G24560.1 63.333 120 42 2 669 788 561 678 6.39e-33 136

Find 236 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATATTTATCCCAATTCTT+AGG 0.135778 2_1:+1679030 Msa0186950:five_prime_UTR
TTCCGAACCTCTCTTATAAT+TGG 0.162753 2_1:+1683374 Msa0186950:exon
ATGAGGTTTCTGAGAGTTTA+AGG 0.165822 2_1:+1679817 Msa0186950:CDS
ACTGGAATTGAGAAGATTTC+TGG 0.197534 2_1:+1679483 Msa0186950:CDS
GAAGGAGTTTGTTAATAATT+TGG 0.197675 2_1:+1679866 Msa0186950:CDS
TTCAAATTTAGTAAGATTCT+TGG 0.227068 2_1:+1680308 Msa0186950:CDS
CATTCTATGGTCGAGTTCTT+TGG 0.227216 2_1:-1680810 None:intergenic
GACTTCCTTCAACCGATTAA+AGG 0.251084 2_1:+1679281 Msa0186950:CDS
TCTGGTAAGGTGAATGGTTT+TGG 0.265573 2_1:+1679501 Msa0186950:CDS
TTCAAAAGAAAGGGCTTTGC+AGG 0.266771 2_1:-1681949 None:intergenic
TGCAATTTCCCCGTTTGAAC+AGG 0.286147 2_1:+1683708 Msa0186950:three_prime_UTR
CTGAATGAGTTATTCAAGTA+TGG 0.287155 2_1:+1682196 Msa0186950:CDS
AACTGCAGCCGTTGAGGGTT+TGG 0.288903 2_1:+1679761 Msa0186950:CDS
TGCTTCCATGAAGGCATAAA+AGG 0.290640 2_1:-1683591 None:intergenic
CCTCCACCCGGTGCATTCTA+TGG 0.302232 2_1:-1680823 None:intergenic
GGAGAGGGATTTGGTTGTTA+AGG 0.312356 2_1:+1679782 Msa0186950:CDS
CACTGTGCAGGCTGGTGCTT+TGG 0.313975 2_1:+1680509 Msa0186950:intron
CAATGTTGATTGTAGATTCT+TGG 0.329932 2_1:+1682157 Msa0186950:intron
AAAGTGGCAGCAAAGGAAAA+AGG 0.331138 2_1:-1682056 None:intergenic
AGATTTCTCTGCTGCATCTC+TGG 0.331404 2_1:-1683139 None:intergenic
AAGACTTGAGGGGCCGAAAT+AGG 0.339224 2_1:+1683247 Msa0186950:CDS
GAGTGAGGGTTTGCAGTTGA+AGG 0.339449 2_1:+1679848 Msa0186950:CDS
ATATGATAAACCCTAAGAAT+TGG 0.340104 2_1:-1679041 None:intergenic
TGCTGCATCTCTGGCTGCCA+TGG 0.341080 2_1:-1683130 None:intergenic
ATTGAATGTAATTGTGGTTT+AGG 0.343298 2_1:-1678988 None:intergenic
GAATTTGATGTGATCGGAAT+TGG 0.344001 2_1:-1679150 None:intergenic
GGAAGTCTGTAACTCCGTTT+TGG 0.350792 2_1:-1679265 None:intergenic
AATGTACGCGCCTCTTTGGC+TGG 0.351712 2_1:+1680050 Msa0186950:CDS
GTTAAGGAAAAGGATCAAAT+TGG 0.357356 2_1:+1680182 Msa0186950:CDS
TGAGGGTTTGGAGAGGGATT+TGG 0.360266 2_1:+1679773 Msa0186950:CDS
TCGAGTCATATGATGGTTAC+TGG 0.361394 2_1:+1679465 Msa0186950:CDS
TGTCATGTTGCAGCAGCATT+TGG 0.363506 2_1:+1683527 Msa0186950:three_prime_UTR
CTTGAGCAAGCACCTTTAAT+CGG 0.365333 2_1:-1679293 None:intergenic
TCACAGTCTCATCTAAATTC+TGG 0.366217 2_1:-1680151 None:intergenic
GGTTGCGTGATGATGCTGTT+AGG 0.370427 2_1:+1679346 Msa0186950:CDS
TATGGTCGAGTTCTTTGGCC+TGG 0.370910 2_1:-1680805 None:intergenic
ATACATATCTAGGCCTATTT+CGG 0.371352 2_1:-1683260 None:intergenic
CATATTTATCCCAATTCTTA+GGG 0.378994 2_1:+1679031 Msa0186950:five_prime_UTR
GCTTTCTGAGTCGTTGTTTG+TGG 0.379653 2_1:+1680004 Msa0186950:CDS
CAAGAAGCTGCTGCAGGCAC+AGG 0.383789 2_1:+1681134 Msa0186950:CDS
TGAGAATGTACGCGCCTCTT+TGG 0.389318 2_1:+1680046 Msa0186950:CDS
ATTGAAAACACAACCATGTA+TGG 0.395655 2_1:-1683654 None:intergenic
AGCACACTGTGAATGAATTA+AGG 0.395713 2_1:+1680574 Msa0186950:CDS
TAATAATTTGGAATCAAAGA+TGG 0.396116 2_1:+1679878 Msa0186950:CDS
ATCAAATTGGTTCTTTGCTT+AGG 0.398406 2_1:+1680195 Msa0186950:CDS
GTTGTTTGTGGCGCAAGAAA+TGG 0.398554 2_1:+1680016 Msa0186950:CDS
GGTATGGCTGCGGTGACTTA+TGG 0.401013 2_1:+1679564 Msa0186950:CDS
ATACGGAAGCGCGATGAATT+CGG 0.405883 2_1:+1679321 Msa0186950:CDS
GGCTTTACTACATTAAGAAC+AGG 0.406993 2_1:-1683488 None:intergenic
CATGGCCAGCATACATATCT+AGG 0.407682 2_1:-1683270 None:intergenic
TGTCATGTGGTCATGGGCTG+TGG 0.412560 2_1:+1680971 Msa0186950:CDS
GGTAATTTGCGACAGGCATT+TGG 0.412774 2_1:+1680993 Msa0186950:CDS
GAATTATGAGATTGCTATTG+AGG 0.413784 2_1:+1679686 Msa0186950:CDS
GGTATTGTGGGCGTGAGCAC+AGG 0.419071 2_1:-1678850 None:intergenic
TCTTATAAACACTACAAATC+TGG 0.419248 2_1:-1679956 None:intergenic
AGAAACTGCGAGGCAATTAG+AGG 0.421139 2_1:+1679398 Msa0186950:CDS
AAGATTTCTGGTAAGGTGAA+TGG 0.421879 2_1:+1679495 Msa0186950:CDS
TGGCTCGGCATGGACTTTGT+TGG 0.426457 2_1:+1683297 Msa0186950:CDS
GGTTAGTTTGGAGTGAAGAT+TGG 0.426514 2_1:-1678871 None:intergenic
ATGCTATTCAATTAAATGTC+CGG 0.428651 2_1:+1679069 Msa0186950:exon
TATGATAAACCCTAAGAATT+GGG 0.432534 2_1:-1679040 None:intergenic
TGCTTTGGAGGATGTTGTTA+AGG 0.434993 2_1:+1680524 Msa0186950:CDS
TATTTCCGACCCTGTTCAAA+CGG 0.435826 2_1:-1683718 None:intergenic
GACTGTGAATAGGTTAGTTA+AGG 0.436099 2_1:+1680166 Msa0186950:CDS
ATTTCCGACCCTGTTCAAAC+GGG 0.437100 2_1:-1683717 None:intergenic
AAAATGTGTTCATCCCTTGC+TGG 0.440413 2_1:-1681926 None:intergenic
TGTGCAGGCTGGTGCTTTGG+AGG 0.442489 2_1:+1680512 Msa0186950:intron
TTTAAGGAAGGAAGAGAGTG+AGG 0.442980 2_1:+1679833 Msa0186950:CDS
GAAAATGGGTTGAGGGAGGT+TGG 0.445747 2_1:+1680278 Msa0186950:CDS
TGAGAACAGAGAAGACTTGA+GGG 0.449088 2_1:+1683236 Msa0186950:CDS
ATGGTCGAGTTCTTTGGCCT+GGG 0.450706 2_1:-1680804 None:intergenic
ATGAGGAAGGAAACTTCGTT+TGG 0.451291 2_1:-1678815 None:intergenic
TGCGAGGCAATTAGAGGAAT+CGG 0.452953 2_1:+1679404 Msa0186950:CDS
CTCTTTATAATGCAGATTGA+GGG 0.453284 2_1:+1681050 Msa0186950:CDS
TCTCTTTATAATGCAGATTG+AGG 0.453775 2_1:+1681049 Msa0186950:CDS
AAGGAATGTACAGAATAATC+AGG 0.455113 2_1:-1683572 None:intergenic
AAAAGTTAGGGATTTGGTTG+AGG 0.457748 2_1:+1680112 Msa0186950:CDS
TAACAGCATCATCACGCAAC+CGG 0.459925 2_1:-1679344 None:intergenic
GACTGATACGCAACAGCAAA+CGG 0.460239 2_1:+1683332 Msa0186950:CDS
ACAGAATGATGCAAGTGTTA+AGG 0.465407 2_1:+1679629 Msa0186950:CDS
CACATCAAATTCACCTTCAC+AGG 0.466563 2_1:+1679161 Msa0186950:CDS
TTTAGTAAGATTCTTGGAGA+TGG 0.466672 2_1:+1680314 Msa0186950:CDS
TTCCAATTATAAGAGAGGTT+CGG 0.467159 2_1:-1683376 None:intergenic
CATTAGCAGCTTCAAAAGAA+AGG 0.469658 2_1:-1681959 None:intergenic
CGTCGAATTGAATGTAATTG+TGG 0.469992 2_1:-1678994 None:intergenic
AGCATAAAATAAGCATATCA+TGG 0.470591 2_1:-1678652 None:intergenic
GCAAACGGCTTCTAACGAAA+TGG 0.471284 2_1:+1683347 Msa0186950:CDS
TGCTATTGAGGTTTCGCAGT+TGG 0.472675 2_1:+1679698 Msa0186950:CDS
AGCGGCAGAAAATGGGTTGA+GGG 0.474191 2_1:+1680271 Msa0186950:CDS
ATAAGAGCGTGAGGAGGAAG+AGG 0.475459 2_1:-1678716 None:intergenic
GGCATCTAAGTCGCCGGCGC+CGG 0.475732 2_1:-1679088 None:intergenic
ACCATGCTTGAGCTTTAGCT+TGG 0.476966 2_1:-1682225 None:intergenic
GCAGAGCAAGAAGCTGCTGC+AGG 0.479033 2_1:+1681128 Msa0186950:CDS
TTCAATTAAATGTCCGGCGC+CGG 0.481437 2_1:+1679075 Msa0186950:exon
TGGAGTGAAGATTGGTATTG+TGG 0.482769 2_1:-1678863 None:intergenic
GATTCTCGCCGAGCTTGATC+AGG 0.482851 2_1:+1679212 Msa0186950:CDS
CGGCGACTTAGATGCCGATT+CGG 0.483746 2_1:+1679095 Msa0186950:CDS
TATAAGATCGTCGATGATGC+GGG 0.485463 2_1:+1679972 Msa0186950:CDS
ATTTAGATGAGACTGTGAAT+AGG 0.488303 2_1:+1680156 Msa0186950:CDS
TTAAGGAAGGAAGAGAGTGA+GGG 0.489133 2_1:+1679834 Msa0186950:CDS
CGCCGCCGAGAAAGCCAAAA+CGG 0.489160 2_1:+1679251 Msa0186950:CDS
AAGAAAACTGCAGCCGTTGA+GGG 0.489646 2_1:+1679756 Msa0186950:CDS
AATTTCTTAATTCAGAAGAC+TGG 0.491064 2_1:+1678913 Msa0186950:five_prime_UTR
GAATTCATCGCGCTTCCGTA+TGG 0.491635 2_1:-1679319 None:intergenic
GGAGTGAAGATTGGTATTGT+GGG 0.493649 2_1:-1678862 None:intergenic
AGAGACAGCAGCTGCTGCCA+TGG 0.494691 2_1:+1683113 Msa0186950:CDS
CAACTCATTTGAAGACGGAT+TGG 0.497391 2_1:-1680243 None:intergenic
TGCTGGCCATGGCAGTGGCT+CGG 0.499416 2_1:+1683282 Msa0186950:CDS
TTAAGGCTAGGGATCAAGCT+AGG 0.500217 2_1:+1679646 Msa0186950:CDS
AAGCACCTTTAATCGGTTGA+AGG 0.502870 2_1:-1679286 None:intergenic
GGGATTGATGTGGATGAGGA+AGG 0.504616 2_1:-1678828 None:intergenic
GCCATGGCAGTGGCTCGGCA+TGG 0.506711 2_1:+1683287 Msa0186950:CDS
ACTTGAGGTCTTCTAGACTA+AGG 0.506773 2_1:+1683175 Msa0186950:CDS
ACGCGCCTCTTTGGCTGGGA+TGG 0.508680 2_1:+1680055 Msa0186950:CDS
GGCTGTGGGTAATTTGCGAC+AGG 0.508723 2_1:+1680986 Msa0186950:CDS
CGATGGTGAAAGATCAAAGA+TGG 0.512405 2_1:-1678750 None:intergenic
AATTGAGAAGATTTCTGGTA+AGG 0.512747 2_1:+1679488 Msa0186950:CDS
GGTTTCTGAGAGTTTAAGGA+AGG 0.515527 2_1:+1679821 Msa0186950:CDS
ATTAGCAGCTTCAAAAGAAA+GGG 0.517822 2_1:-1681958 None:intergenic
TGAACAGCAATTTGTGGCAC+AGG 0.518504 2_1:+1681160 Msa0186950:CDS
GAAACTTCGTTTGGAAGAAA+CGG 0.518703 2_1:-1678806 None:intergenic
GAATAGGTTAGTTAAGGAAA+AGG 0.519027 2_1:+1680172 Msa0186950:CDS
GCAGATTGAGGGGCTAATGA+TGG 0.523203 2_1:+1681061 Msa0186950:CDS
ATGTACGCGCCTCTTTGGCT+GGG 0.523765 2_1:+1680051 Msa0186950:CDS
AGAGGATGAAATATACACTT+TGG 0.525090 2_1:+1680385 Msa0186950:CDS
GTTGATTGTAGATTCTTGGT+GGG 0.528212 2_1:+1682161 Msa0186950:intron
TAGCGGCAGAAAATGGGTTG+AGG 0.529571 2_1:+1680270 Msa0186950:CDS
AAAATTTCCAATTATAAGAG+AGG 0.530012 2_1:-1683381 None:intergenic
AACTATGAACTGAGTCTGAA+AGG 0.532962 2_1:-1682019 None:intergenic
TGCTGGAGATGAGCAGTGAA+AGG 0.534476 2_1:-1681909 None:intergenic
AGCCGTTGAGGGTTTGGAGA+GGG 0.534744 2_1:+1679767 Msa0186950:CDS
GTTGCGTGATGATGCTGTTA+GGG 0.539375 2_1:+1679347 Msa0186950:CDS
TGTTGATTGTAGATTCTTGG+TGG 0.540306 2_1:+1682160 Msa0186950:intron
TCTCTTCAAGTTCCTCCACC+CGG 0.540700 2_1:-1680835 None:intergenic
CCATAGAATGCACCGGGTGG+AGG 0.541339 2_1:+1680823 Msa0186950:CDS
GTCATGTGGTCATGGGCTGT+GGG 0.542457 2_1:+1680972 Msa0186950:CDS
ACAGGGGATTGATGTGGATG+AGG 0.543169 2_1:-1678832 None:intergenic
ATCCCTCTCCAAACCCTCAA+CGG 0.544511 2_1:-1679769 None:intergenic
TCTTAATTCAGAAGACTGGT+TGG 0.544826 2_1:+1678917 Msa0186950:five_prime_UTR
GAAATATACCGGTATGGCTG+CGG 0.544973 2_1:+1679554 Msa0186950:CDS
GAAGAAAACTGCAGCCGTTG+AGG 0.546363 2_1:+1679755 Msa0186950:CDS
TGATTGTAGATTCTTGGTGG+GGG 0.547544 2_1:+1682163 Msa0186950:intron
TTATAAGATCGTCGATGATG+CGG 0.548811 2_1:+1679971 Msa0186950:CDS
TGACAATGATCGACCAACAC+TGG 0.549017 2_1:-1683509 None:intergenic
GAGTGCTTTGTCAAAGAGGA+TGG 0.550359 2_1:+1680217 Msa0186950:CDS
GTATTGTGGGCGTGAGCACA+GGG 0.550762 2_1:-1678849 None:intergenic
AGGTGTTGAACAGCAATTTG+TGG 0.550763 2_1:+1681154 Msa0186950:CDS
ATGATGCAAGTGTTAAGGCT+AGG 0.551573 2_1:+1679634 Msa0186950:CDS
TAATGTAACGACAGTATATG+TGG 0.552792 2_1:-1683616 None:intergenic
ATTGTGGTTTAGGTTGTCGA+TGG 0.553011 2_1:-1678978 None:intergenic
TGATGCAAGTGTTAAGGCTA+GGG 0.553468 2_1:+1679635 Msa0186950:CDS
TAAGGATGAGAAGTTGAATG+AGG 0.556456 2_1:+1679800 Msa0186950:CDS
TTCACTGCTCATCTCCAGCA+AGG 0.557887 2_1:+1681912 Msa0186950:CDS
GACGTCGCTGAGCACCGAAT+CGG 0.557895 2_1:-1679109 None:intergenic
GCAGTTGTCAACGCTCAAGC+AGG 0.558280 2_1:+1683032 Msa0186950:intron
TTTCCCCGTTTGAACAGGGT+CGG 0.559643 2_1:+1683713 Msa0186950:three_prime_UTR
TTAGGAGTGCTTTGTCAAAG+AGG 0.560450 2_1:+1680213 Msa0186950:CDS
TTGAGAACAGAGAAGACTTG+AGG 0.560542 2_1:+1683235 Msa0186950:CDS
TGCTGTTAGGGAGAAGGAAG+AGG 0.562775 2_1:+1679359 Msa0186950:CDS
CTTGAGGTCTTCTAGACTAA+GGG 0.563951 2_1:+1683176 Msa0186950:CDS
CTAGATATGTATGCTGGCCA+TGG 0.566839 2_1:+1683271 Msa0186950:CDS
AAAGGATGAAGTTACGAAAG+TGG 0.568159 2_1:-1682072 None:intergenic
TCCAAGCTAAAGCTCAAGCA+TGG 0.569147 2_1:+1682224 Msa0186950:CDS
GTCGCAGAAATATACCGGTA+TGG 0.569668 2_1:+1679548 Msa0186950:CDS
TGAGAAATCGAGTCATATGA+TGG 0.570001 2_1:+1679458 Msa0186950:CDS
TAAGCAGCACATAGAAGCCC+AGG 0.570404 2_1:+1680787 Msa0186950:CDS
AACCTAAAATGTGAGAAGTA+CGG 0.572289 2_1:-1678605 None:intergenic
ATGTATGCTGGCCATGGCAG+TGG 0.573801 2_1:+1683277 Msa0186950:CDS
GCTGGAGATGAGCAGTGAAA+GGG 0.573872 2_1:-1681908 None:intergenic
CCGGTATATTTCTGCGACCG+CGG 0.574878 2_1:-1679543 None:intergenic
AACTCGACCATAGAATGCAC+CGG 0.575532 2_1:+1680816 Msa0186950:CDS
TGCTTGCTCAAGAAGCCATA+CGG 0.576060 2_1:+1679304 Msa0186950:CDS
TAATGTAGTAAAGCCAGTGT+TGG 0.577204 2_1:+1683496 Msa0186950:three_prime_UTR
CGAATCGGCATCTAAGTCGC+CGG 0.577434 2_1:-1679094 None:intergenic
TTGATTGTAGATTCTTGGTG+GGG 0.578249 2_1:+1682162 Msa0186950:intron
GGTACGTTGTTCTCACGTCA+CGG 0.578556 2_1:+1678938 Msa0186950:five_prime_UTR
AAACAACGACTCAGAAAGCT+CGG 0.579527 2_1:-1680000 None:intergenic
TGATGTGATCGGAATTGGAT+CGG 0.580529 2_1:-1679145 None:intergenic
CTGAAGAAGAAATTAACAGA+TGG 0.583950 2_1:+1681096 Msa0186950:CDS
TATTAGTGATTTGAGAGATG+AGG 0.584521 2_1:+1679728 Msa0186950:CDS
CAAGCTCGGCGAGAATCTCA+CGG 0.585055 2_1:-1679206 None:intergenic
ATAGGCCTAGATATGTATGC+TGG 0.587227 2_1:+1683265 Msa0186950:CDS
ATAAGTCACCGCAGCCATAC+CGG 0.588731 2_1:-1679562 None:intergenic
TAGAGGAATCGGCGAAGGAG+CGG 0.590365 2_1:+1679415 Msa0186950:CDS
CCGCGGTCGCAGAAATATAC+CGG 0.590801 2_1:+1679543 Msa0186950:CDS
GCAATTTCCCCGTTTGAACA+GGG 0.592007 2_1:+1683709 Msa0186950:three_prime_UTR
CTCTCAAGTTAGCAGACTTG+AGG 0.593940 2_1:+1683160 Msa0186950:CDS
AATCTATACATGAGTTGACT+AGG 0.596241 2_1:+1680078 Msa0186950:CDS
GGTGGAGGAACTTGAAGAGA+AGG 0.596408 2_1:+1680838 Msa0186950:CDS
AGTTACGAAAGTGGCAGCAA+AGG 0.597277 2_1:-1682063 None:intergenic
GCAATTAGAGGAATCGGCGA+AGG 0.598822 2_1:+1679410 Msa0186950:CDS
TCCATGCCGAGCCACTGCCA+TGG 0.602713 2_1:-1683288 None:intergenic
AGAGGCAAAGCAATCCATGT+TGG 0.607377 2_1:+1683062 Msa0186950:CDS
ACTTGAAGAGAAGGAAAGAG+TGG 0.609943 2_1:+1680847 Msa0186950:CDS
TTCAACTGATCAATCAACAA+AGG 0.612891 2_1:-1679912 None:intergenic
TCTTTATAATGCAGATTGAG+GGG 0.613990 2_1:+1681051 Msa0186950:CDS
AGAGACAGAGACGGTAGCGA+TGG 0.614364 2_1:-1678767 None:intergenic
TATGTGGAATGCTTCCATGA+AGG 0.614570 2_1:-1683600 None:intergenic
GGAGCGGCAAGGATTACGAT+CGG 0.614644 2_1:+1679431 Msa0186950:CDS
ATCAAACATAAATACACAAG+GGG 0.616202 2_1:-1683423 None:intergenic
GCTCAAGCAGGAACTTGAAG+AGG 0.618199 2_1:+1683044 Msa0186950:CDS
CTCAGCGACGTCGAGGACGA+CGG 0.618536 2_1:+1679120 Msa0186950:CDS
CAGTTCATAGTTCATACTCA+AGG 0.620442 2_1:+1682030 Msa0186950:CDS
TTCGGTGCTCAGCGACGTCG+AGG 0.625351 2_1:+1679113 Msa0186950:CDS
TCACTGCTCATCTCCAGCAA+GGG 0.625998 2_1:+1681913 Msa0186950:CDS
TGAAAGGAGTAACTCAGCAG+AGG 0.626089 2_1:-1682003 None:intergenic
AGTTCATAGTTCATACTCAA+GGG 0.628939 2_1:+1682031 Msa0186950:CDS
GAAGGTGAATTTGATGTGAT+CGG 0.630779 2_1:-1679156 None:intergenic
ACGGAGACTTCATCCTGTGA+AGG 0.633111 2_1:-1679174 None:intergenic
TAAGGCTAGGGATCAAGCTA+GGG 0.634167 2_1:+1679647 Msa0186950:CDS
TGATGATGCTGTTAGGGAGA+AGG 0.635078 2_1:+1679353 Msa0186950:CDS
TAAGAGCGTGAGGAGGAAGA+GGG 0.639625 2_1:-1678715 None:intergenic
GTAACAGAAAAGTCCATACA+TGG 0.642245 2_1:+1683641 Msa0186950:three_prime_UTR
AGATTCCATCCCAGCCAAAG+AGG 0.642943 2_1:-1680060 None:intergenic
CAGCCGTTGAGGGTTTGGAG+AGG 0.644245 2_1:+1679766 Msa0186950:CDS
TTTCTTCTCAGATTCCAACA+TGG 0.645960 2_1:-1683076 None:intergenic
GGAAGCGCGATGAATTCGGC+CGG 0.645981 2_1:+1679325 Msa0186950:CDS
GAATCGGCGAAGGAGCGGCA+AGG 0.647315 2_1:+1679420 Msa0186950:CDS
TGAAGCGAAATAAGAGCGTG+AGG 0.649388 2_1:-1678725 None:intergenic
TTTCCGACCCTGTTCAAACG+GGG 0.652188 2_1:-1683716 None:intergenic
GAAGTGGAAGCGCTTTGCCG+CGG 0.652202 2_1:+1679526 Msa0186950:CDS
GGCAGAAAATGGGTTGAGGG+AGG 0.653218 2_1:+1680274 Msa0186950:CDS
AGCGAAATAAGAGCGTGAGG+AGG 0.653332 2_1:-1678722 None:intergenic
AAATCAAACATAAATACACA+AGG 0.659117 2_1:-1683425 None:intergenic
GTGAGCACAGGGGATTGATG+TGG 0.660306 2_1:-1678838 None:intergenic
ACTCGACCATAGAATGCACC+GGG 0.661588 2_1:+1680817 Msa0186950:CDS
TTCTAGACTAAGGGACAGAG+TGG 0.663047 2_1:+1683185 Msa0186950:CDS
AATCAAACATAAATACACAA+GGG 0.663567 2_1:-1683424 None:intergenic
GAGAACAGAGAAGACTTGAG+GGG 0.677822 2_1:+1683237 Msa0186950:CDS
GGGGCTAATGATGGACATTG+CGG 0.692078 2_1:+1681070 Msa0186950:CDS
CGACCATAGAATGCACCGGG+TGG 0.695799 2_1:+1680820 Msa0186950:CDS
AATCAAAGATGGAATCGTTG+AGG 0.695950 2_1:+1679889 Msa0186950:CDS
AGCTTCTAGAAGAAACTGCG+AGG 0.719282 2_1:+1679388 Msa0186950:CDS
CTAGGGAACAGATTGAACAG+AGG 0.728016 2_1:+1679664 Msa0186950:CDS
ACTTTGTTGGAATTCAGCAG+CGG 0.730616 2_1:+1683310 Msa0186950:CDS
TATTGTGGGCGTGAGCACAG+GGG 0.761531 2_1:-1678848 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTCTAAATTTTAATTA+AGG - chr2_1:1678895-1678914 None:intergenic 10.0%
!!! AATTTTAATTAAGGTTAGTT+TGG - chr2_1:1678886-1678905 None:intergenic 15.0%
!!! AAATGCACAATTTTATTTAT+TGG + chr2_1:1681330-1681349 Msa0186950:intron 15.0%
!!! AATTTTATTTATTGGCAATT+TGG + chr2_1:1681338-1681357 Msa0186950:intron 15.0%
!! TAATTTCTTTATACAATTAC+TGG + chr2_1:1682311-1682330 Msa0186950:intron 15.0%
!!! TGGTTCATTTAATTTTTTTA+TGG - chr2_1:1682413-1682432 None:intergenic 15.0%
!!! TACATTTTTTCCATTATTTT+TGG + chr2_1:1682827-1682846 Msa0186950:intron 15.0%
!!! TTTTAGGTTTTAATCGAATT+TGG + chr2_1:1678619-1678638 Msa0186950:five_prime_UTR 20.0%
!!! ATATGCTTATTTTATGCTTT+CGG + chr2_1:1678657-1678676 Msa0186950:five_prime_UTR 20.0%
!!! TAATAATTTGGAATCAAAGA+TGG + chr2_1:1679878-1679897 Msa0186950:CDS 20.0%
!! TTCAAATTTAGTAAGATTCT+TGG + chr2_1:1680308-1680327 Msa0186950:CDS 20.0%
!! AAATGACAAGTCAAAAAAAA+CGG + chr2_1:1680352-1680371 Msa0186950:CDS 20.0%
!!! TTTGTTTTTATTTCTCTTTC+TGG + chr2_1:1680415-1680434 Msa0186950:intron 20.0%
!! CAGTGTATATTCTAAATTAA+CGG - chr2_1:1681416-1681435 None:intergenic 20.0%
!! ATTTACAGAAGAAATAATTC+TGG - chr2_1:1681538-1681557 None:intergenic 20.0%
!! AAATAAATATAATTTCGGTG+TGG - chr2_1:1681630-1681649 None:intergenic 20.0%
!! ACACCGAAATTATATTTATT+TGG + chr2_1:1681629-1681648 Msa0186950:intron 20.0%
!! GCTCCAAATAAATATAATTT+CGG - chr2_1:1681635-1681654 None:intergenic 20.0%
!!! ATTTTTCAAGTGTCATATTA+AGG + chr2_1:1682373-1682392 Msa0186950:intron 20.0%
!! AAAATTTCCAATTATAAGAG+AGG - chr2_1:1683384-1683403 None:intergenic 20.0%
!! AATCAAACATAAATACACAA+GGG - chr2_1:1683427-1683446 None:intergenic 20.0%
!! AAATCAAACATAAATACACA+AGG - chr2_1:1683428-1683447 None:intergenic 20.0%
! AGCATAAAATAAGCATATCA+TGG - chr2_1:1678655-1678674 None:intergenic 25.0%
! AATTTCTTAATTCAGAAGAC+TGG + chr2_1:1678913-1678932 Msa0186950:five_prime_UTR 25.0%
! ATTGAATGTAATTGTGGTTT+AGG - chr2_1:1678991-1679010 None:intergenic 25.0%
! TCATATTTATCCCAATTCTT+AGG + chr2_1:1679030-1679049 Msa0186950:five_prime_UTR 25.0%
! CATATTTATCCCAATTCTTA+GGG + chr2_1:1679031-1679050 Msa0186950:five_prime_UTR 25.0%
! TATGATAAACCCTAAGAATT+GGG - chr2_1:1679043-1679062 None:intergenic 25.0%
! ATATGATAAACCCTAAGAAT+TGG - chr2_1:1679044-1679063 None:intergenic 25.0%
! ATGCTATTCAATTAAATGTC+CGG + chr2_1:1679069-1679088 Msa0186950:exon 25.0%
!!! GAAGGAGTTTGTTAATAATT+TGG + chr2_1:1679866-1679885 Msa0186950:CDS 25.0%
! TCTTATAAACACTACAAATC+TGG - chr2_1:1679959-1679978 None:intergenic 25.0%
!! GATTGTTGTTCAAAAAGTTA+GGG + chr2_1:1680100-1680119 Msa0186950:CDS 25.0%
! AAAAACAACTCATTTGAAGA+CGG - chr2_1:1680251-1680270 None:intergenic 25.0%
!!! TTCAAATGAGTTGTTTTTAG+CGG + chr2_1:1680253-1680272 Msa0186950:CDS 25.0%
!!! TTTGCTATTTGTCTAACTTT+GGG + chr2_1:1680627-1680646 Msa0186950:intron 25.0%
! ATATTTGCTTAACTCCATTA+AGG + chr2_1:1680747-1680766 Msa0186950:intron 25.0%
! TATTTGCTTAACTCCATTAA+GGG + chr2_1:1680748-1680767 Msa0186950:intron 25.0%
!! AGAATGTATATTTTGTCATG+TGG + chr2_1:1680958-1680977 Msa0186950:intron 25.0%
!!! TTTTACAAGTTTGCTATGTT+TGG + chr2_1:1681215-1681234 Msa0186950:intron 25.0%
!! CGTTAATTTAGAATATACAC+TGG + chr2_1:1681414-1681433 Msa0186950:intron 25.0%
! AATTTATAGTTCTTAAGCCA+AGG - chr2_1:1681721-1681740 None:intergenic 25.0%
! GTAAGTACACAAATTATCAA+TGG - chr2_1:1682281-1682300 None:intergenic 25.0%
!! TTGATAATTTGTGTACTTAC+TGG + chr2_1:1682281-1682300 Msa0186950:intron 25.0%
! AAAAATTAGAAGCTTAAGCT+TGG - chr2_1:1682433-1682452 None:intergenic 25.0%
! TGAACATATGAGTTTATGTT+TGG + chr2_1:1682489-1682508 Msa0186950:intron 25.0%
! GAACATATGAGTTTATGTTT+GGG + chr2_1:1682490-1682509 Msa0186950:intron 25.0%
!!! CTTAGAGTAATGTTTGTTAT+CGG + chr2_1:1682722-1682741 Msa0186950:intron 25.0%
!!! TTTTGGAGAATTTATTTGTG+TGG + chr2_1:1682796-1682815 Msa0186950:intron 25.0%
! TGCAACAAGTATTTATGATT+AGG - chr2_1:1683007-1683026 None:intergenic 25.0%
! ATCAAACATAAATACACAAG+GGG - chr2_1:1683426-1683445 None:intergenic 25.0%
!! TTCAATTTTATGTCACAGAA+TGG + chr2_1:1683449-1683468 Msa0186950:three_prime_UTR 25.0%
AACCTAAAATGTGAGAAGTA+CGG - chr2_1:1678608-1678627 None:intergenic 30.0%
!! GTTTTAATCGAATTTGGCAA+TGG + chr2_1:1678625-1678644 Msa0186950:five_prime_UTR 30.0%
AAAAAAACAAGAGACAGAGA+CGG - chr2_1:1678779-1678798 None:intergenic 30.0%
!! AATCTCACGGAATTTTTCAA+CGG - chr2_1:1679196-1679215 None:intergenic 30.0%
!! AATTGAGAAGATTTCTGGTA+AGG + chr2_1:1679488-1679507 Msa0186950:CDS 30.0%
! GAATTATGAGATTGCTATTG+AGG + chr2_1:1679686-1679705 Msa0186950:CDS 30.0%
TATTAGTGATTTGAGAGATG+AGG + chr2_1:1679728-1679747 Msa0186950:CDS 30.0%
TTCAACTGATCAATCAACAA+AGG - chr2_1:1679915-1679934 None:intergenic 30.0%
! AATCTATACATGAGTTGACT+AGG + chr2_1:1680078-1680097 Msa0186950:CDS 30.0%
! GGATTGTTGTTCAAAAAGTT+AGG + chr2_1:1680099-1680118 Msa0186950:CDS 30.0%
TGTTCAAAAAGTTAGGGATT+TGG + chr2_1:1680106-1680125 Msa0186950:CDS 30.0%
ATTTAGATGAGACTGTGAAT+AGG + chr2_1:1680156-1680175 Msa0186950:CDS 30.0%
! GAATAGGTTAGTTAAGGAAA+AGG + chr2_1:1680172-1680191 Msa0186950:CDS 30.0%
GTTAAGGAAAAGGATCAAAT+TGG + chr2_1:1680182-1680201 Msa0186950:CDS 30.0%
! ATCAAATTGGTTCTTTGCTT+AGG + chr2_1:1680195-1680214 Msa0186950:CDS 30.0%
TTTAGTAAGATTCTTGGAGA+TGG + chr2_1:1680314-1680333 Msa0186950:CDS 30.0%
AAAAACGGAAAAAGAAGAAG+AGG + chr2_1:1680367-1680386 Msa0186950:CDS 30.0%
AGAGGATGAAATATACACTT+TGG + chr2_1:1680385-1680404 Msa0186950:CDS 30.0%
!! GTTTGCTATTTGTCTAACTT+TGG + chr2_1:1680626-1680645 Msa0186950:intron 30.0%
TACTGAAGAACTTACATCTT+TGG + chr2_1:1680682-1680701 Msa0186950:intron 30.0%
ATATGATCCCTTAATTGTGA+AGG + chr2_1:1680911-1680930 Msa0186950:intron 30.0%
GACAAAACCTTCACAATTAA+GGG - chr2_1:1680921-1680940 None:intergenic 30.0%
! TATATTTTGTCATGTGGTCA+TGG + chr2_1:1680964-1680983 Msa0186950:CDS 30.0%
! ATATTTTGTCATGTGGTCAT+GGG + chr2_1:1680965-1680984 Msa0186950:CDS 30.0%
TCTCTTTATAATGCAGATTG+AGG + chr2_1:1681049-1681068 Msa0186950:CDS 30.0%
CTCTTTATAATGCAGATTGA+GGG + chr2_1:1681050-1681069 Msa0186950:CDS 30.0%
TCTTTATAATGCAGATTGAG+GGG + chr2_1:1681051-1681070 Msa0186950:CDS 30.0%
CTGAAGAAGAAATTAACAGA+TGG + chr2_1:1681096-1681115 Msa0186950:CDS 30.0%
AATTTGTAAGTTGCAGTTGA+TGG + chr2_1:1681254-1681273 Msa0186950:intron 30.0%
TACACTGGAATATGTGTATA+TGG - chr2_1:1681578-1681597 None:intergenic 30.0%
! TGAAGTGGAAAAATTGCTTT+TGG + chr2_1:1681690-1681709 Msa0186950:intron 30.0%
!! GAAGTGGAAAAATTGCTTTT+GGG + chr2_1:1681691-1681710 Msa0186950:intron 30.0%
!! AAGTGGAAAAATTGCTTTTG+GGG + chr2_1:1681692-1681711 Msa0186950:intron 30.0%
AACCATCTAAAAAATCTGCA+GGG - chr2_1:1681790-1681809 None:intergenic 30.0%
AAACCATCTAAAAAATCTGC+AGG - chr2_1:1681791-1681810 None:intergenic 30.0%
!!! TTTTGAAATCTATTCCCTTC+TGG - chr2_1:1681837-1681856 None:intergenic 30.0%
ATTAGCAGCTTCAAAAGAAA+GGG - chr2_1:1681961-1681980 None:intergenic 30.0%
AGTTCATAGTTCATACTCAA+GGG + chr2_1:1682031-1682050 Msa0186950:CDS 30.0%
TTGGGATTAAGAAGAAACAA+AGG - chr2_1:1682093-1682112 None:intergenic 30.0%
! CAATGTTGATTGTAGATTCT+TGG + chr2_1:1682157-1682176 Msa0186950:intron 30.0%
CTGAATGAGTTATTCAAGTA+TGG + chr2_1:1682196-1682215 Msa0186950:CDS 30.0%
GACACTTGAAAAATGAAGTT+GGG - chr2_1:1682367-1682386 None:intergenic 30.0%
TGACACTTGAAAAATGAAGT+TGG - chr2_1:1682368-1682387 None:intergenic 30.0%
CGATAACAAACATTACTCTA+AGG - chr2_1:1682724-1682743 None:intergenic 30.0%
!!! TTCCATTATTTTTGGTACAG+TGG + chr2_1:1682835-1682854 Msa0186950:intron 30.0%
AACTAATTAGGCTGTAAATC+TGG + chr2_1:1682892-1682911 Msa0186950:intron 30.0%
TCATAATATCCATTAACAGG+TGG - chr2_1:1682951-1682970 None:intergenic 30.0%
GAGTCATAATATCCATTAAC+AGG - chr2_1:1682954-1682973 None:intergenic 30.0%
TCATGTTAACTGACAATACA+AGG - chr2_1:1682979-1682998 None:intergenic 30.0%
ATACATATCTAGGCCTATTT+CGG - chr2_1:1683263-1683282 None:intergenic 30.0%
TTCCAATTATAAGAGAGGTT+CGG - chr2_1:1683379-1683398 None:intergenic 30.0%
AAGGAATGTACAGAATAATC+AGG - chr2_1:1683575-1683594 None:intergenic 30.0%
TAATGTAACGACAGTATATG+TGG - chr2_1:1683619-1683638 None:intergenic 30.0%
ATTGAAAACACAACCATGTA+TGG - chr2_1:1683657-1683676 None:intergenic 30.0%
! ATACATGGTTGTGTTTTCAA+TGG + chr2_1:1683656-1683675 Msa0186950:three_prime_UTR 30.0%
! ATCCGTACTTCTCACATTTT+AGG + chr2_1:1678603-1678622 Msa0186950:five_prime_UTR 35.0%
!!! TGCTTATTTTATGCTTTCGG+TGG + chr2_1:1678660-1678679 Msa0186950:five_prime_UTR 35.0%
GAAACTTCGTTTGGAAGAAA+CGG - chr2_1:1678809-1678828 None:intergenic 35.0%
TCTTAATTCAGAAGACTGGT+TGG + chr2_1:1678917-1678936 Msa0186950:five_prime_UTR 35.0%
CGTCGAATTGAATGTAATTG+TGG - chr2_1:1678997-1679016 None:intergenic 35.0%
GAATTTGATGTGATCGGAAT+TGG - chr2_1:1679153-1679172 None:intergenic 35.0%
GAAGGTGAATTTGATGTGAT+CGG - chr2_1:1679159-1679178 None:intergenic 35.0%
TGAGAAATCGAGTCATATGA+TGG + chr2_1:1679458-1679477 Msa0186950:CDS 35.0%
ACTGGAATTGAGAAGATTTC+TGG + chr2_1:1679483-1679502 Msa0186950:CDS 35.0%
!! AAGATTTCTGGTAAGGTGAA+TGG + chr2_1:1679495-1679514 Msa0186950:CDS 35.0%
ACAGAATGATGCAAGTGTTA+AGG + chr2_1:1679629-1679648 Msa0186950:CDS 35.0%
TAAGGATGAGAAGTTGAATG+AGG + chr2_1:1679800-1679819 Msa0186950:CDS 35.0%
! ATGAGGTTTCTGAGAGTTTA+AGG + chr2_1:1679817-1679836 Msa0186950:CDS 35.0%
AATCAAAGATGGAATCGTTG+AGG + chr2_1:1679889-1679908 Msa0186950:CDS 35.0%
TTATAAGATCGTCGATGATG+CGG + chr2_1:1679971-1679990 Msa0186950:CDS 35.0%
! AAAAGTTAGGGATTTGGTTG+AGG + chr2_1:1680112-1680131 Msa0186950:CDS 35.0%
TCACAGTCTCATCTAAATTC+TGG - chr2_1:1680154-1680173 None:intergenic 35.0%
! GACTGTGAATAGGTTAGTTA+AGG + chr2_1:1680166-1680185 Msa0186950:CDS 35.0%
!!! TTGTTTTTAGCGGCAGAAAA+TGG + chr2_1:1680263-1680282 Msa0186950:CDS 35.0%
!!! TGTTTTTAGCGGCAGAAAAT+GGG + chr2_1:1680264-1680283 Msa0186950:CDS 35.0%
!!! TTTCTGGTTTTCAACGAAAC+TGG + chr2_1:1680431-1680450 Msa0186950:intron 35.0%
GATACGTAAAGAACTCAACA+AGG - chr2_1:1680489-1680508 None:intergenic 35.0%
AGCACACTGTGAATGAATTA+AGG + chr2_1:1680574-1680593 Msa0186950:CDS 35.0%
CGACAAAACCTTCACAATTA+AGG - chr2_1:1680922-1680941 None:intergenic 35.0%
GGTATGGAATGCTATTAGTT+AGG + chr2_1:1681181-1681200 Msa0186950:intron 35.0%
!! TACAAGTTTGCTATGTTTGG+AGG + chr2_1:1681218-1681237 Msa0186950:intron 35.0%
! TTTATTTGGAGCAGCAATAG+TGG + chr2_1:1681643-1681662 Msa0186950:intron 35.0%
TAGTGGTCTATCTAAATTGC+AGG + chr2_1:1681660-1681679 Msa0186950:intron 35.0%
ACCATCTAAAAAATCTGCAG+GGG - chr2_1:1681789-1681808 None:intergenic 35.0%
CATTAGCAGCTTCAAAAGAA+AGG - chr2_1:1681962-1681981 None:intergenic 35.0%
AACTATGAACTGAGTCTGAA+AGG - chr2_1:1682022-1682041 None:intergenic 35.0%
CAGTTCATAGTTCATACTCA+AGG + chr2_1:1682030-1682049 Msa0186950:CDS 35.0%
AAAGGATGAAGTTACGAAAG+TGG - chr2_1:1682075-1682094 None:intergenic 35.0%
! AAGAAGGTGTATCTCACATT+GGG - chr2_1:1682111-1682130 None:intergenic 35.0%
! AAAGAAGGTGTATCTCACAT+TGG - chr2_1:1682112-1682131 None:intergenic 35.0%
ATCTACAATCAACATTGACC+AGG - chr2_1:1682154-1682173 None:intergenic 35.0%
! TGTTGATTGTAGATTCTTGG+TGG + chr2_1:1682160-1682179 Msa0186950:intron 35.0%
GTTGATTGTAGATTCTTGGT+GGG + chr2_1:1682161-1682180 Msa0186950:intron 35.0%
TTGATTGTAGATTCTTGGTG+GGG + chr2_1:1682162-1682181 Msa0186950:intron 35.0%
CACAAATTATCAATGGCTCA+AGG - chr2_1:1682274-1682293 None:intergenic 35.0%
TGTAAATGAATTGAGCCAAG+CGG - chr2_1:1682557-1682576 None:intergenic 35.0%
AATAACCGTGAGAAACACTA+AGG - chr2_1:1682686-1682705 None:intergenic 35.0%
! TGATGATATGCCTTTGACTT+TGG + chr2_1:1682768-1682787 Msa0186950:intron 35.0%
! GATGATATGCCTTTGACTTT+GGG + chr2_1:1682769-1682788 Msa0186950:intron 35.0%
CAAAAAATGCCCAAAGTCAA+AGG - chr2_1:1682781-1682800 None:intergenic 35.0%
!!! CTTTGACTTTGGGCATTTTT+TGG + chr2_1:1682779-1682798 Msa0186950:intron 35.0%
TACTTTAAGCCACCTGTTAA+TGG + chr2_1:1682939-1682958 Msa0186950:intron 35.0%
TTTCTTCTCAGATTCCAACA+TGG - chr2_1:1683079-1683098 None:intergenic 35.0%
TTCCGAACCTCTCTTATAAT+TGG + chr2_1:1683374-1683393 Msa0186950:exon 35.0%
GGCTTTACTACATTAAGAAC+AGG - chr2_1:1683491-1683510 None:intergenic 35.0%
TAATGTAGTAAAGCCAGTGT+TGG + chr2_1:1683496-1683515 Msa0186950:three_prime_UTR 35.0%
! ACATTCCTTTTATGCCTTCA+TGG + chr2_1:1683586-1683605 Msa0186950:three_prime_UTR 35.0%
GTAACAGAAAAGTCCATACA+TGG + chr2_1:1683641-1683660 Msa0186950:three_prime_UTR 35.0%
! ATGGAAGTCTTTTTGTCTAG+TGG + chr2_1:1683675-1683694 Msa0186950:three_prime_UTR 35.0%
CGATGGTGAAAGATCAAAGA+TGG - chr2_1:1678753-1678772 None:intergenic 40.0%
ATGAGGAAGGAAACTTCGTT+TGG - chr2_1:1678818-1678837 None:intergenic 40.0%
GGAGTGAAGATTGGTATTGT+GGG - chr2_1:1678865-1678884 None:intergenic 40.0%
TGGAGTGAAGATTGGTATTG+TGG - chr2_1:1678866-1678885 None:intergenic 40.0%
!! GGTTAGTTTGGAGTGAAGAT+TGG - chr2_1:1678874-1678893 None:intergenic 40.0%
!! ATTGTGGTTTAGGTTGTCGA+TGG - chr2_1:1678981-1679000 None:intergenic 40.0%
TGATGTGATCGGAATTGGAT+CGG - chr2_1:1679148-1679167 None:intergenic 40.0%
CACATCAAATTCACCTTCAC+AGG + chr2_1:1679161-1679180 Msa0186950:CDS 40.0%
!! TTGCTTTTCCTGATCAAGCT+CGG - chr2_1:1679223-1679242 None:intergenic 40.0%
!!! TAACTCCGTTTTGGCTTTCT+CGG - chr2_1:1679259-1679278 None:intergenic 40.0%
GACTTCCTTCAACCGATTAA+AGG + chr2_1:1679281-1679300 Msa0186950:CDS 40.0%
AAGCACCTTTAATCGGTTGA+AGG - chr2_1:1679289-1679308 None:intergenic 40.0%
CTTGAGCAAGCACCTTTAAT+CGG - chr2_1:1679296-1679315 None:intergenic 40.0%
TCGAGTCATATGATGGTTAC+TGG + chr2_1:1679465-1679484 Msa0186950:CDS 40.0%
! TCTGGTAAGGTGAATGGTTT+TGG + chr2_1:1679501-1679520 Msa0186950:CDS 40.0%
ATGATGCAAGTGTTAAGGCT+AGG + chr2_1:1679634-1679653 Msa0186950:CDS 40.0%
TGATGCAAGTGTTAAGGCTA+GGG + chr2_1:1679635-1679654 Msa0186950:CDS 40.0%
! GGTTTCTGAGAGTTTAAGGA+AGG + chr2_1:1679821-1679840 Msa0186950:CDS 40.0%
TTTAAGGAAGGAAGAGAGTG+AGG + chr2_1:1679833-1679852 Msa0186950:CDS 40.0%
TTAAGGAAGGAAGAGAGTGA+GGG + chr2_1:1679834-1679853 Msa0186950:CDS 40.0%
TATAAGATCGTCGATGATGC+GGG + chr2_1:1679972-1679991 Msa0186950:CDS 40.0%
AAACAACGACTCAGAAAGCT+CGG - chr2_1:1680003-1680022 None:intergenic 40.0%
!! TTAGGAGTGCTTTGTCAAAG+AGG + chr2_1:1680213-1680232 Msa0186950:CDS 40.0%
CAACTCATTTGAAGACGGAT+TGG - chr2_1:1680246-1680265 None:intergenic 40.0%
!! TGCTTTGGAGGATGTTGTTA+AGG + chr2_1:1680524-1680543 Msa0186950:CDS 40.0%
AAACTCAACTCTGCCCTTAA+TGG - chr2_1:1680764-1680783 None:intergenic 40.0%
CATTCTATGGTCGAGTTCTT+TGG - chr2_1:1680813-1680832 None:intergenic 40.0%
ACTTGAAGAGAAGGAAAGAG+TGG + chr2_1:1680847-1680866 Msa0186950:CDS 40.0%
!! AGGTGTTGAACAGCAATTTG+TGG + chr2_1:1681154-1681173 Msa0186950:CDS 40.0%
CATCATTGCACAACTAAAGC+TGG - chr2_1:1681372-1681391 None:intergenic 40.0%
TGATCGCAGTGACATAAACA+TGG - chr2_1:1681452-1681471 None:intergenic 40.0%
TAGAGCTAAAGGGAAAAGGT+AGG - chr2_1:1681508-1681527 None:intergenic 40.0%
!!! ACCTTTTCCCTTTAGCTCTA+TGG + chr2_1:1681508-1681527 Msa0186950:intron 40.0%
ACCATAGAGCTAAAGGGAAA+AGG - chr2_1:1681512-1681531 None:intergenic 40.0%
TGGAAGACCATAGAGCTAAA+GGG - chr2_1:1681518-1681537 None:intergenic 40.0%
TGGTCTATCTAAATTGCAGG+CGG + chr2_1:1681663-1681682 Msa0186950:intron 40.0%
AGGGGCTGAAATAAAAGAAG+GGG - chr2_1:1681771-1681790 None:intergenic 40.0%
CAGGGGCTGAAATAAAAGAA+GGG - chr2_1:1681772-1681791 None:intergenic 40.0%
AAATCTATTCCCTTCTGGTG+GGG - chr2_1:1681832-1681851 None:intergenic 40.0%
GAAATCTATTCCCTTCTGGT+GGG - chr2_1:1681833-1681852 None:intergenic 40.0%
TGAAATCTATTCCCTTCTGG+TGG - chr2_1:1681834-1681853 None:intergenic 40.0%
AAAATGTGTTCATCCCTTGC+TGG - chr2_1:1681929-1681948 None:intergenic 40.0%
TTCAAAAGAAAGGGCTTTGC+AGG - chr2_1:1681952-1681971 None:intergenic 40.0%
! GAAGCTGCTAATGCATTTTC+AGG + chr2_1:1681969-1681988 Msa0186950:CDS 40.0%
AAGTGGCAGCAAAGGAAAAA+GGG - chr2_1:1682058-1682077 None:intergenic 40.0%
AAAGTGGCAGCAAAGGAAAA+AGG - chr2_1:1682059-1682078 None:intergenic 40.0%
AAGAACGGAGAATGGAAAGA+AGG - chr2_1:1682127-1682146 None:intergenic 40.0%
TGATTGTAGATTCTTGGTGG+GGG + chr2_1:1682163-1682182 Msa0186950:intron 40.0%
! GAGTGCTCTAAGTTTAGACT+TGG - chr2_1:1682535-1682554 None:intergenic 40.0%
AGATGAGTAAGAAGATGCCA+TGG - chr2_1:1682609-1682628 None:intergenic 40.0%
CTTACTCACGACAAACTCAA+TGG + chr2_1:1682650-1682669 Msa0186950:intron 40.0%
TGAGAAACACTAAGGCTGAA+AGG - chr2_1:1682678-1682697 None:intergenic 40.0%
TTCAGCCTTAGTGTTTCTCA+CGG + chr2_1:1682678-1682697 Msa0186950:intron 40.0%
GGCCACTGTACCAAAAATAA+TGG - chr2_1:1682840-1682859 None:intergenic 40.0%
TGCTTGGGGATGAACTAATT+AGG + chr2_1:1682880-1682899 Msa0186950:intron 40.0%
AGGCTGTAAATCTGGTAGAT+TGG + chr2_1:1682900-1682919 Msa0186950:intron 40.0%
ACTTGAGGTCTTCTAGACTA+AGG + chr2_1:1683175-1683194 Msa0186950:CDS 40.0%
CTTGAGGTCTTCTAGACTAA+GGG + chr2_1:1683176-1683195 Msa0186950:CDS 40.0%
TTGAGAACAGAGAAGACTTG+AGG + chr2_1:1683235-1683254 Msa0186950:CDS 40.0%
TGAGAACAGAGAAGACTTGA+GGG + chr2_1:1683236-1683255 Msa0186950:CDS 40.0%
ATAGGCCTAGATATGTATGC+TGG + chr2_1:1683265-1683284 Msa0186950:CDS 40.0%
ACTTTGTTGGAATTCAGCAG+CGG + chr2_1:1683310-1683329 Msa0186950:CDS 40.0%
! TGCTTCCATGAAGGCATAAA+AGG - chr2_1:1683594-1683613 None:intergenic 40.0%
TATGTGGAATGCTTCCATGA+AGG - chr2_1:1683603-1683622 None:intergenic 40.0%
TATTTCCGACCCTGTTCAAA+CGG - chr2_1:1683721-1683740 None:intergenic 40.0%
! TGAAGCGAAATAAGAGCGTG+AGG - chr2_1:1678728-1678747 None:intergenic 45.0%
TTCAATTAAATGTCCGGCGC+CGG + chr2_1:1679075-1679094 Msa0186950:exon 45.0%
! GGAAGTCTGTAACTCCGTTT+TGG - chr2_1:1679268-1679287 None:intergenic 45.0%
TGCTTGCTCAAGAAGCCATA+CGG + chr2_1:1679304-1679323 Msa0186950:CDS 45.0%
! ATACGGAAGCGCGATGAATT+CGG + chr2_1:1679321-1679340 Msa0186950:CDS 45.0%
TAACAGCATCATCACGCAAC+CGG - chr2_1:1679347-1679366 None:intergenic 45.0%
! GTTGCGTGATGATGCTGTTA+GGG + chr2_1:1679347-1679366 Msa0186950:CDS 45.0%
! TGATGATGCTGTTAGGGAGA+AGG + chr2_1:1679353-1679372 Msa0186950:CDS 45.0%
! AGCTTCTAGAAGAAACTGCG+AGG + chr2_1:1679388-1679407 Msa0186950:CDS 45.0%
AGAAACTGCGAGGCAATTAG+AGG + chr2_1:1679398-1679417 Msa0186950:CDS 45.0%
TGCGAGGCAATTAGAGGAAT+CGG + chr2_1:1679404-1679423 Msa0186950:CDS 45.0%
!!! GGTAAGGTGAATGGTTTTGG+TGG + chr2_1:1679504-1679523 Msa0186950:CDS 45.0%
!!! GTGAATGGTTTTGGTGGAAG+TGG + chr2_1:1679510-1679529 Msa0186950:CDS 45.0%
GTCGCAGAAATATACCGGTA+TGG + chr2_1:1679548-1679567 Msa0186950:CDS 45.0%
GAAATATACCGGTATGGCTG+CGG + chr2_1:1679554-1679573 Msa0186950:CDS 45.0%
TTAAGGCTAGGGATCAAGCT+AGG + chr2_1:1679646-1679665 Msa0186950:CDS 45.0%
TAAGGCTAGGGATCAAGCTA+GGG + chr2_1:1679647-1679666 Msa0186950:CDS 45.0%
CTAGGGAACAGATTGAACAG+AGG + chr2_1:1679664-1679683 Msa0186950:CDS 45.0%
TGCTATTGAGGTTTCGCAGT+TGG + chr2_1:1679698-1679717 Msa0186950:CDS 45.0%
AAGAAAACTGCAGCCGTTGA+GGG + chr2_1:1679756-1679775 Msa0186950:CDS 45.0%
! GGAGAGGGATTTGGTTGTTA+AGG + chr2_1:1679782-1679801 Msa0186950:CDS 45.0%
GCTTTCTGAGTCGTTGTTTG+TGG + chr2_1:1680004-1680023 Msa0186950:CDS 45.0%
GTTGTTTGTGGCGCAAGAAA+TGG + chr2_1:1680016-1680035 Msa0186950:CDS 45.0%
GAGTGCTTTGTCAAAGAGGA+TGG + chr2_1:1680217-1680236 Msa0186950:CDS 45.0%
TCTTTACGTATCCACTGTGC+AGG + chr2_1:1680497-1680516 Msa0186950:intron 45.0%
AACTCGACCATAGAATGCAC+CGG + chr2_1:1680816-1680835 Msa0186950:CDS 45.0%
! GGTAATTTGCGACAGGCATT+TGG + chr2_1:1680993-1681012 Msa0186950:CDS 45.0%
TGAACAGCAATTTGTGGCAC+AGG + chr2_1:1681160-1681179 Msa0186950:CDS 45.0%
AGCAATTTGTGGCACAGGTA+TGG + chr2_1:1681165-1681184 Msa0186950:intron 45.0%
CTGGAAGACCATAGAGCTAA+AGG - chr2_1:1681519-1681538 None:intergenic 45.0%
TGAAATAAAAGAAGGGGGGG+GGG - chr2_1:1681765-1681784 None:intergenic 45.0%
CTGAAATAAAAGAAGGGGGG+GGG - chr2_1:1681766-1681785 None:intergenic 45.0%
GCTGAAATAAAAGAAGGGGG+GGG - chr2_1:1681767-1681786 None:intergenic 45.0%
GGCTGAAATAAAAGAAGGGG+GGG - chr2_1:1681768-1681787 None:intergenic 45.0%
GGGCTGAAATAAAAGAAGGG+GGG - chr2_1:1681769-1681788 None:intergenic 45.0%
GGGGCTGAAATAAAAGAAGG+GGG - chr2_1:1681770-1681789 None:intergenic 45.0%
GCAGGGGCTGAAATAAAAGA+AGG - chr2_1:1681773-1681792 None:intergenic 45.0%
!!! GCCCCTGCAGATTTTTTAGA+TGG + chr2_1:1681785-1681804 Msa0186950:intron 45.0%
AATCTATTCCCTTCTGGTGG+GGG - chr2_1:1681831-1681850 None:intergenic 45.0%
AGTTCGATGTGTGTCATGCT+AGG + chr2_1:1681872-1681891 Msa0186950:intron 45.0%
TGAAAGGAGTAACTCAGCAG+AGG - chr2_1:1682006-1682025 None:intergenic 45.0%
AGTGGCAGCAAAGGAAAAAG+GGG - chr2_1:1682057-1682076 None:intergenic 45.0%
AGTTACGAAAGTGGCAGCAA+AGG - chr2_1:1682066-1682085 None:intergenic 45.0%
CATTGACCAGGAGAGAAGAA+CGG - chr2_1:1682142-1682161 None:intergenic 45.0%
TCCAAGCTAAAGCTCAAGCA+TGG + chr2_1:1682224-1682243 Msa0186950:CDS 45.0%
! ACCATGCTTGAGCTTTAGCT+TGG - chr2_1:1682228-1682247 None:intergenic 45.0%
! TAAACTTAGAGCACTCCGCT+TGG + chr2_1:1682539-1682558 Msa0186950:intron 45.0%
ACTCATCTTTGATGCAGCCA+TGG + chr2_1:1682621-1682640 Msa0186950:intron 45.0%
TCGTGAGTAAGAAGATGCCA+TGG - chr2_1:1682641-1682660 None:intergenic 45.0%
AGAGGCAAAGCAATCCATGT+TGG + chr2_1:1683062-1683081 Msa0186950:CDS 45.0%
AGATTTCTCTGCTGCATCTC+TGG - chr2_1:1683142-1683161 None:intergenic 45.0%
CTCTCAAGTTAGCAGACTTG+AGG + chr2_1:1683160-1683179 Msa0186950:CDS 45.0%
TTCTAGACTAAGGGACAGAG+TGG + chr2_1:1683185-1683204 Msa0186950:CDS 45.0%
GAGAACAGAGAAGACTTGAG+GGG + chr2_1:1683237-1683256 Msa0186950:CDS 45.0%
CATGGCCAGCATACATATCT+AGG - chr2_1:1683273-1683292 None:intergenic 45.0%
CTAGATATGTATGCTGGCCA+TGG + chr2_1:1683271-1683290 Msa0186950:CDS 45.0%
GACTGATACGCAACAGCAAA+CGG + chr2_1:1683332-1683351 Msa0186950:CDS 45.0%
GCAAACGGCTTCTAACGAAA+TGG + chr2_1:1683347-1683366 Msa0186950:CDS 45.0%
TGACAATGATCGACCAACAC+TGG - chr2_1:1683512-1683531 None:intergenic 45.0%
TGTCATGTTGCAGCAGCATT+TGG + chr2_1:1683527-1683546 Msa0186950:three_prime_UTR 45.0%
TGCAATTTCCCCGTTTGAAC+AGG + chr2_1:1683708-1683727 Msa0186950:three_prime_UTR 45.0%
GCAATTTCCCCGTTTGAACA+GGG + chr2_1:1683709-1683728 Msa0186950:three_prime_UTR 45.0%
ATTTCCGACCCTGTTCAAAC+GGG - chr2_1:1683720-1683739 None:intergenic 45.0%
! TAAGAGCGTGAGGAGGAAGA+GGG - chr2_1:1678718-1678737 None:intergenic 50.0%
! ATAAGAGCGTGAGGAGGAAG+AGG - chr2_1:1678719-1678738 None:intergenic 50.0%
! AGCGAAATAAGAGCGTGAGG+AGG - chr2_1:1678725-1678744 None:intergenic 50.0%
GGGATTGATGTGGATGAGGA+AGG - chr2_1:1678831-1678850 None:intergenic 50.0%
ACAGGGGATTGATGTGGATG+AGG - chr2_1:1678835-1678854 None:intergenic 50.0%
GGTACGTTGTTCTCACGTCA+CGG + chr2_1:1678938-1678957 Msa0186950:five_prime_UTR 50.0%
ACGGAGACTTCATCCTGTGA+AGG - chr2_1:1679177-1679196 None:intergenic 50.0%
GAATTCATCGCGCTTCCGTA+TGG - chr2_1:1679322-1679341 None:intergenic 50.0%
! GGTTGCGTGATGATGCTGTT+AGG + chr2_1:1679346-1679365 Msa0186950:CDS 50.0%
TGCTGTTAGGGAGAAGGAAG+AGG + chr2_1:1679359-1679378 Msa0186950:CDS 50.0%
GCAATTAGAGGAATCGGCGA+AGG + chr2_1:1679410-1679429 Msa0186950:CDS 50.0%
ATAAGTCACCGCAGCCATAC+CGG - chr2_1:1679565-1679584 None:intergenic 50.0%
GAAGAAAACTGCAGCCGTTG+AGG + chr2_1:1679755-1679774 Msa0186950:CDS 50.0%
ATCCCTCTCCAAACCCTCAA+CGG - chr2_1:1679772-1679791 None:intergenic 50.0%
TGAGGGTTTGGAGAGGGATT+TGG + chr2_1:1679773-1679792 Msa0186950:CDS 50.0%
GAGTGAGGGTTTGCAGTTGA+AGG + chr2_1:1679848-1679867 Msa0186950:CDS 50.0%
TGAGAATGTACGCGCCTCTT+TGG + chr2_1:1680046-1680065 Msa0186950:CDS 50.0%
AGATTCCATCCCAGCCAAAG+AGG - chr2_1:1680063-1680082 None:intergenic 50.0%
!! TAGCGGCAGAAAATGGGTTG+AGG + chr2_1:1680270-1680289 Msa0186950:CDS 50.0%
!! AGCGGCAGAAAATGGGTTGA+GGG + chr2_1:1680271-1680290 Msa0186950:CDS 50.0%
!! GAAAATGGGTTGAGGGAGGT+TGG + chr2_1:1680278-1680297 Msa0186950:CDS 50.0%
TAAGCAGCACATAGAAGCCC+AGG + chr2_1:1680787-1680806 Msa0186950:CDS 50.0%
ATGGTCGAGTTCTTTGGCCT+GGG - chr2_1:1680807-1680826 None:intergenic 50.0%
TATGGTCGAGTTCTTTGGCC+TGG - chr2_1:1680808-1680827 None:intergenic 50.0%
ACTCGACCATAGAATGCACC+GGG + chr2_1:1680817-1680836 Msa0186950:CDS 50.0%
! TCTCTTCAAGTTCCTCCACC+CGG - chr2_1:1680838-1680857 None:intergenic 50.0%
GGTGGAGGAACTTGAAGAGA+AGG + chr2_1:1680838-1680857 Msa0186950:CDS 50.0%
GCAGATTGAGGGGCTAATGA+TGG + chr2_1:1681061-1681080 Msa0186950:CDS 50.0%
!! GGGGCTAATGATGGACATTG+CGG + chr2_1:1681070-1681089 Msa0186950:CDS 50.0%
TGCAGGACACAACACTACAC+TGG - chr2_1:1681593-1681612 None:intergenic 50.0%
ATTGCAGGCGGATAGTGAAG+TGG + chr2_1:1681675-1681694 Msa0186950:intron 50.0%
!!! AATTGCTTTTGGGGCTGCCT+TGG + chr2_1:1681701-1681720 Msa0186950:intron 50.0%
AAATAAAAGAAGGGGGGGGG+GGG - chr2_1:1681763-1681782 None:intergenic 50.0%
GAAATAAAAGAAGGGGGGGG+GGG - chr2_1:1681764-1681783 None:intergenic 50.0%
! TCATGTTTTCCCCCACCAGA+AGG + chr2_1:1681819-1681838 Msa0186950:intron 50.0%
! CATGTTTTCCCCCACCAGAA+GGG + chr2_1:1681820-1681839 Msa0186950:intron 50.0%
GCTGGAGATGAGCAGTGAAA+GGG - chr2_1:1681911-1681930 None:intergenic 50.0%
TGCTGGAGATGAGCAGTGAA+AGG - chr2_1:1681912-1681931 None:intergenic 50.0%
TTCACTGCTCATCTCCAGCA+AGG + chr2_1:1681912-1681931 Msa0186950:CDS 50.0%
TCACTGCTCATCTCCAGCAA+GGG + chr2_1:1681913-1681932 Msa0186950:CDS 50.0%
CAGGAGAGAAGAACGGAGAA+TGG - chr2_1:1682135-1682154 None:intergenic 50.0%
CATTCTCCGTTCTTCTCTCC+TGG + chr2_1:1682133-1682152 Msa0186950:intron 50.0%
GCTCATCTTTGATGCAGCCA+TGG + chr2_1:1682589-1682608 Msa0186950:intron 50.0%
TTGGTACAGTGGCCATTCGT+TGG + chr2_1:1682846-1682865 Msa0186950:intron 50.0%
GCTCAAGCAGGAACTTGAAG+AGG + chr2_1:1683044-1683063 Msa0186950:CDS 50.0%
AAGACTTGAGGGGCCGAAAT+AGG + chr2_1:1683247-1683266 Msa0186950:CDS 50.0%
TTTCCCCGTTTGAACAGGGT+CGG + chr2_1:1683713-1683732 Msa0186950:three_prime_UTR 50.0%
TTTCCGACCCTGTTCAAACG+GGG - chr2_1:1683719-1683738 None:intergenic 50.0%
AGAGACAGAGACGGTAGCGA+TGG - chr2_1:1678770-1678789 None:intergenic 55.0%
GTGAGCACAGGGGATTGATG+TGG - chr2_1:1678841-1678860 None:intergenic 55.0%
TATTGTGGGCGTGAGCACAG+GGG - chr2_1:1678851-1678870 None:intergenic 55.0%
GTATTGTGGGCGTGAGCACA+GGG - chr2_1:1678852-1678871 None:intergenic 55.0%
CGAATCGGCATCTAAGTCGC+CGG - chr2_1:1679097-1679116 None:intergenic 55.0%
! CGGCGACTTAGATGCCGATT+CGG + chr2_1:1679095-1679114 Msa0186950:CDS 55.0%
CAAGCTCGGCGAGAATCTCA+CGG - chr2_1:1679209-1679228 None:intergenic 55.0%
GATTCTCGCCGAGCTTGATC+AGG + chr2_1:1679212-1679231 Msa0186950:CDS 55.0%
!!! CTCCGTTTTGGCTTTCTCGG+CGG - chr2_1:1679256-1679275 None:intergenic 55.0%
TAGAGGAATCGGCGAAGGAG+CGG + chr2_1:1679415-1679434 Msa0186950:CDS 55.0%
GGAGCGGCAAGGATTACGAT+CGG + chr2_1:1679431-1679450 Msa0186950:CDS 55.0%
! CCGGTATATTTCTGCGACCG+CGG - chr2_1:1679546-1679565 None:intergenic 55.0%
CCGCGGTCGCAGAAATATAC+CGG + chr2_1:1679543-1679562 Msa0186950:CDS 55.0%
GGTATGGCTGCGGTGACTTA+TGG + chr2_1:1679564-1679583 Msa0186950:CDS 55.0%
AACTGCAGCCGTTGAGGGTT+TGG + chr2_1:1679761-1679780 Msa0186950:CDS 55.0%
AGCCGTTGAGGGTTTGGAGA+GGG + chr2_1:1679767-1679786 Msa0186950:CDS 55.0%
AATGTACGCGCCTCTTTGGC+TGG + chr2_1:1680050-1680069 Msa0186950:CDS 55.0%
ATGTACGCGCCTCTTTGGCT+GGG + chr2_1:1680051-1680070 Msa0186950:CDS 55.0%
!! GGCAGAAAATGGGTTGAGGG+AGG + chr2_1:1680274-1680293 Msa0186950:CDS 55.0%
TACGTATCCACTGTGCAGGC+TGG + chr2_1:1680501-1680520 Msa0186950:intron 55.0%
! TGTCATGTGGTCATGGGCTG+TGG + chr2_1:1680971-1680990 Msa0186950:CDS 55.0%
! GTCATGTGGTCATGGGCTGT+GGG + chr2_1:1680972-1680991 Msa0186950:CDS 55.0%
! GGCTGTGGGTAATTTGCGAC+AGG + chr2_1:1680986-1681005 Msa0186950:CDS 55.0%
GTAGTGTTGTGTCCTGCAGC+TGG + chr2_1:1681595-1681614 Msa0186950:intron 55.0%
AATAAAAGAAGGGGGGGGGG+GGG - chr2_1:1681762-1681781 None:intergenic 55.0%
GCAGTTGTCAACGCTCAAGC+AGG + chr2_1:1683032-1683051 Msa0186950:intron 55.0%
ATGTATGCTGGCCATGGCAG+TGG + chr2_1:1683277-1683296 Msa0186950:CDS 55.0%
! TGGCTCGGCATGGACTTTGT+TGG + chr2_1:1683297-1683316 Msa0186950:CDS 55.0%
GGTATTGTGGGCGTGAGCAC+AGG - chr2_1:1678853-1678872 None:intergenic 60.0%
!! GACGTCGCTGAGCACCGAAT+CGG - chr2_1:1679112-1679131 None:intergenic 60.0%
CGCCGCCGAGAAAGCCAAAA+CGG + chr2_1:1679251-1679270 Msa0186950:CDS 60.0%
! GGAAGCGCGATGAATTCGGC+CGG + chr2_1:1679325-1679344 Msa0186950:CDS 60.0%
!! GAAGTGGAAGCGCTTTGCCG+CGG + chr2_1:1679526-1679545 Msa0186950:CDS 60.0%
CAGCCGTTGAGGGTTTGGAG+AGG + chr2_1:1679766-1679785 Msa0186950:CDS 60.0%
! CAAAGCACCAGCCTGCACAG+TGG - chr2_1:1680511-1680530 None:intergenic 60.0%
CACTGTGCAGGCTGGTGCTT+TGG + chr2_1:1680509-1680528 Msa0186950:intron 60.0%
TGTGCAGGCTGGTGCTTTGG+AGG + chr2_1:1680512-1680531 Msa0186950:intron 60.0%
CGACCATAGAATGCACCGGG+TGG + chr2_1:1680820-1680839 Msa0186950:CDS 60.0%
CCTCCACCCGGTGCATTCTA+TGG - chr2_1:1680826-1680845 None:intergenic 60.0%
CCATAGAATGCACCGGGTGG+AGG + chr2_1:1680823-1680842 Msa0186950:CDS 60.0%
GCAGAGCAAGAAGCTGCTGC+AGG + chr2_1:1681128-1681147 Msa0186950:CDS 60.0%
CAAGAAGCTGCTGCAGGCAC+AGG + chr2_1:1681134-1681153 Msa0186950:CDS 60.0%
ATAAAAGAAGGGGGGGGGGG+GGG - chr2_1:1681761-1681780 None:intergenic 60.0%
GTTCATCCCCAAGCAGCGCA+GGG - chr2_1:1682875-1682894 None:intergenic 60.0%
AGTTCATCCCCAAGCAGCGC+AGG - chr2_1:1682876-1682895 None:intergenic 60.0%
AGAGACAGCAGCTGCTGCCA+TGG + chr2_1:1683113-1683132 Msa0186950:CDS 60.0%
TGCTGCATCTCTGGCTGCCA+TGG - chr2_1:1683133-1683152 None:intergenic 60.0%
!! TTCGGTGCTCAGCGACGTCG+AGG + chr2_1:1679113-1679132 Msa0186950:CDS 65.0%
CTCAGCGACGTCGAGGACGA+CGG + chr2_1:1679120-1679139 Msa0186950:CDS 65.0%
GAATCGGCGAAGGAGCGGCA+AGG + chr2_1:1679420-1679439 Msa0186950:CDS 65.0%
ACGCGCCTCTTTGGCTGGGA+TGG + chr2_1:1680055-1680074 Msa0186950:CDS 65.0%
TAAAAGAAGGGGGGGGGGGG+GGG - chr2_1:1681760-1681779 None:intergenic 65.0%
AGCGCAGGGCAGCCAACGAA+TGG - chr2_1:1682861-1682880 None:intergenic 65.0%
TTGGCTGCCCTGCGCTGCTT+GGG + chr2_1:1682865-1682884 Msa0186950:intron 65.0%
TGCTGGCCATGGCAGTGGCT+CGG + chr2_1:1683282-1683301 Msa0186950:CDS 65.0%
TCCATGCCGAGCCACTGCCA+TGG - chr2_1:1683291-1683310 None:intergenic 65.0%
GGCATCTAAGTCGCCGGCGC+CGG - chr2_1:1679091-1679110 None:intergenic 70.0%
GTGTCCTGCAGCTGGAGCGC+TGG + chr2_1:1681603-1681622 Msa0186950:intron 70.0%
TGGTCCAGCGCTCCAGCTGC+AGG - chr2_1:1681610-1681629 None:intergenic 70.0%
AAAAGAAGGGGGGGGGGGGG+GGG - chr2_1:1681759-1681778 None:intergenic 70.0%
GTTGGCTGCCCTGCGCTGCT+TGG + chr2_1:1682864-1682883 Msa0186950:intron 70.0%
TGGCTGCCCTGCGCTGCTTG+GGG + chr2_1:1682866-1682885 Msa0186950:intron 70.0%
! GCCATGGCAGTGGCTCGGCA+TGG + chr2_1:1683287-1683306 Msa0186950:CDS 70.0%
AAAGAAGGGGGGGGGGGGGG+GGG - chr2_1:1681758-1681777 None:intergenic 75.0%
! GGGGGGGGGGGGGGGAATGA+GGG - chr2_1:1681750-1681769 None:intergenic 80.0%
! GGGGGGGGGGGGGGGGAATG+AGG - chr2_1:1681751-1681770 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 1678579 1683771 1678579 ID=Msa0186950;Name=Msa0186950
chr2_1 mRNA 1678579 1683771 1678579 ID=Msa0186950-mRNA-1;Parent=Msa0186950;Name=Msa0186950-mRNA-1;_AED=0.06;_eAED=0.06;_QI=505|0.33|0.57|0.71|1|1|7|379|788
chr2_1 exon 1678579 1680406 1678579 ID=Msa0186950-mRNA-1:exon:687;Parent=Msa0186950-mRNA-1
chr2_1 exon 1680519 1680595 1680519 ID=Msa0186950-mRNA-1:exon:688;Parent=Msa0186950-mRNA-1
chr2_1 exon 1680769 1680880 1680769 ID=Msa0186950-mRNA-1:exon:689;Parent=Msa0186950-mRNA-1
chr2_1 exon 1680960 1681181 1680960 ID=Msa0186950-mRNA-1:exon:690;Parent=Msa0186950-mRNA-1
chr2_1 exon 1681894 1682079 1681894 ID=Msa0186950-mRNA-1:exon:691;Parent=Msa0186950-mRNA-1
chr2_1 exon 1682172 1682261 1682172 ID=Msa0186950-mRNA-1:exon:692;Parent=Msa0186950-mRNA-1
chr2_1 exon 1683036 1683771 1683036 ID=Msa0186950-mRNA-1:exon:693;Parent=Msa0186950-mRNA-1
chr2_1 five_prime_UTR 1678579 1679083 1678579 ID=Msa0186950-mRNA-1:five_prime_utr;Parent=Msa0186950-mRNA-1
chr2_1 CDS 1679084 1680406 1679084 ID=Msa0186950-mRNA-1:cds;Parent=Msa0186950-mRNA-1
chr2_1 CDS 1680519 1680595 1680519 ID=Msa0186950-mRNA-1:cds;Parent=Msa0186950-mRNA-1
chr2_1 CDS 1680769 1680880 1680769 ID=Msa0186950-mRNA-1:cds;Parent=Msa0186950-mRNA-1
chr2_1 CDS 1680960 1681181 1680960 ID=Msa0186950-mRNA-1:cds;Parent=Msa0186950-mRNA-1
chr2_1 CDS 1681894 1682079 1681894 ID=Msa0186950-mRNA-1:cds;Parent=Msa0186950-mRNA-1
chr2_1 CDS 1682172 1682261 1682172 ID=Msa0186950-mRNA-1:cds;Parent=Msa0186950-mRNA-1
chr2_1 CDS 1683036 1683392 1683036 ID=Msa0186950-mRNA-1:cds;Parent=Msa0186950-mRNA-1
chr2_1 three_prime_UTR 1683393 1683771 1683393 ID=Msa0186950-mRNA-1:three_prime_utr;Parent=Msa0186950-mRNA-1
Gene Sequence

>Msa0186950

ATGTCCGGCGCCGGCGACTTAGATGCCGATTCGGTGCTCAGCGACGTCGAGGACGACGGCGCCGATCCAATTCCGATCACATCAAATTCACCTTCACAGGATGAAGTCTCCGTTGAAAAATTCCGTGAGATTCTCGCCGAGCTTGATCAGGAAAAGCAAGCACGCATCGCCGCCGAGAAAGCCAAAACGGAGTTACAGACTTCCTTCAACCGATTAAAGGTGCTTGCTCAAGAAGCCATACGGAAGCGCGATGAATTCGGCCGGTTGCGTGATGATGCTGTTAGGGAGAAGGAAGAGGCTACGAAGCTTCTAGAAGAAACTGCGAGGCAATTAGAGGAATCGGCGAAGGAGCGGCAAGGATTACGATCGGAGATTGAGAAATCGAGTCATATGATGGTTACTGGAATTGAGAAGATTTCTGGTAAGGTGAATGGTTTTGGTGGAAGTGGAAGCGCTTTGCCGCGGTCGCAGAAATATACCGGTATGGCTGCGGTGACTTATGGTGTTATAAAGAGAGCGAATGAGATTGTTGAAGAGTTGTTGAAACAGAATGATGCAAGTGTTAAGGCTAGGGATCAAGCTAGGGAACAGATTGAACAGAGGAATTATGAGATTGCTATTGAGGTTTCGCAGTTGGAAGCAACTATTAGTGATTTGAGAGATGAGGTTGCGAAGAAAACTGCAGCCGTTGAGGGTTTGGAGAGGGATTTGGTTGTTAAGGATGAGAAGTTGAATGAGGTTTCTGAGAGTTTAAGGAAGGAAGAGAGTGAGGGTTTGCAGTTGAAGGAGTTTGTTAATAATTTGGAATCAAAGATGGAATCGTTGAGGCCTTTGTTGATTGATCAGTTGAATTTTGTGTCTAAGATTCACAACCAGATTTGTAGTGTTTATAAGATCGTCGATGATGCGGGTTATTCCGAGCTTTCTGAGTCGTTGTTTGTGGCGCAAGAAATGGATATTGATGAGAATGTACGCGCCTCTTTGGCTGGGATGGAATCTATACATGAGTTGACTAGGATTGTTGTTCAAAAAGTTAGGGATTTGGTTGAGGAGAAGAATCGTGAGATCCAGAATTTAGATGAGACTGTGAATAGGTTAGTTAAGGAAAAGGATCAAATTGGTTCTTTGCTTAGGAGTGCTTTGTCAAAGAGGATGGCATCCAATCCGTCTTCAAATGAGTTGTTTTTAGCGGCAGAAAATGGGTTGAGGGAGGTTGGTATAGATTTCAAATTTAGTAAGATTCTTGGAGATGGAAAGCTTGCAGCTTCAAATGACAAGTCAAAAAAAACGGAAAAAGAAGAAGAGGATGAAATATACACTTTGGCTGGTGCTTTGGAGGATGTTGTTAAGGCATCTCAGCTTGAGATCATTGAGCTGCAGCACACTGTGAATGAATTAAGGGCAGAGTTGAGTTTACTTAAGCAGCACATAGAAGCCCAGGCCAAAGAACTCGACCATAGAATGCACCGGGTGGAGGAACTTGAAGAGAAGGAAAGAGTGGCAAATGAAAATAATGTATATTTTGTCATGTGGTCATGGGCTGTGGGTAATTTGCGACAGGCATTTGGTGTCAATACTTTTCTATCTCTTAGAATCAATTGTCTCTTTATAATGCAGATTGAGGGGCTAATGATGGACATTGCGGCTGCTGAAGAAGAAATTAACAGATGGAAATTAGCAGCAGAGCAAGAAGCTGCTGCAGGCACAGGTGTTGAACAGCAATTTGTGGCACAGGTTGCTGTGCTTATCCCTTTCACTGCTCATCTCCAGCAAGGGATGAACACATTTTCCTGCAAAGCCCTTTCTTTTGAAGCTGCTAATGCATTTTCAGGCAGCATCTTAGCCTCTGCTGAGTTACTCCTTTCAGACTCAGTTCATAGTTCATACTCAAGGGCCCCTTTTTCCTTTGCTGCCACTTTCATTCTTGGTGGGGGTGTAAATGAGCTGAATGAGTTATTCAAGTATGGTTTCTTCCAAGCTAAAGCTCAAGCATGGTTTCTTCAAGCTCAATTGTCAACGCTCAAGCAGGAACTTGAAGAGGCAAAGCAATCCATGTTGGAATCTGAGAAGAAATTAAAATTCAAAGAAGAGACAGCAGCTGCTGCCATGGCAGCCAGAGATGCAGCAGAGAAATCTCTCAAGTTAGCAGACTTGAGGTCTTCTAGACTAAGGGACAGAGTGGAAGAGCTCACTCATCAGCTCGAAGAGTTTGAGAACAGAGAAGACTTGAGGGGCCGAAATAGGCCTAGATATGTATGCTGGCCATGGCAGTGGCTCGGCATGGACTTTGTTGGAATTCAGCAGCGGACTGATACGCAACAGCAAACGGCTTCTAACGAAATGGAGCTTTCCGAACCTCTCTTATAA
Protein sequence

>Msa0186950

MSGAGDLDADSVLSDVEDDGADPIPITSNSPSQDEVSVEKFREILAELDQEKQARIAAEKAKTELQTSFNRLKVLAQEAIRKRDEFGRLRDDAVREKEEATKLLEETARQLEESAKERQGLRSEIEKSSHMMVTGIEKISGKVNGFGGSGSALPRSQKYTGMAAVTYGVIKRANEIVEELLKQNDASVKARDQAREQIEQRNYEIAIEVSQLEATISDLRDEVAKKTAAVEGLERDLVVKDEKLNEVSESLRKEESEGLQLKEFVNNLESKMESLRPLLIDQLNFVSKIHNQICSVYKIVDDAGYSELSESLFVAQEMDIDENVRASLAGMESIHELTRIVVQKVRDLVEEKNREIQNLDETVNRLVKEKDQIGSLLRSALSKRMASNPSSNELFLAAENGLREVGIDFKFSKILGDGKLAASNDKSKKTEKEEEDEIYTLAGALEDVVKASQLEIIELQHTVNELRAELSLLKQHIEAQAKELDHRMHRVEELEEKERVANENNVYFVMWSWAVGNLRQAFGVNTFLSLRINCLFIMQIEGLMMDIAAAEEEINRWKLAAEQEAAAGTGVEQQFVAQVAVLIPFTAHLQQGMNTFSCKALSFEAANAFSGSILASAELLLSDSVHSSYSRAPFSFAATFILGGGVNELNELFKYGFFQAKAQAWFLQAQLSTLKQELEEAKQSMLESEKKLKFKEETAAAAMAARDAAEKSLKLADLRSSRLRDRVEELTHQLEEFENREDLRGRNRPRYVCWPWQWLGMDFVGIQQRTDTQQQTASNEMELSEPLL*