Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42831.t1 | XP_024631650.1 | 88.6 | 429 | 34 | 2 | 1 | 429 | 1 | 414 | 6.20E-213 | 750 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42831.t1 | Q944L3 | 63.9 | 244 | 81 | 4 | 56 | 293 | 54 | 296 | 1.4e-80 | 301.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42831.t1 | G7IKT3 | 88.6 | 429 | 34 | 2 | 1 | 429 | 1 | 414 | 4.5e-213 | 750.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene42831.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene42831 | 0.871071 | 9.04E-67 | -1.69E-46 |
| MS.gene049151 | MS.gene42831 | 0.835158 | 1.97E-56 | -1.69E-46 |
| MS.gene049153 | MS.gene42831 | 0.864201 | 1.44E-64 | -1.69E-46 |
| MS.gene049260 | MS.gene42831 | 0.818922 | 1.52E-52 | -1.69E-46 |
| MS.gene049356 | MS.gene42831 | 0.863254 | 2.84E-64 | -1.69E-46 |
| MS.gene049369 | MS.gene42831 | 0.805997 | 1.02E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene42831 | 0.855263 | 7.09E-62 | -1.69E-46 |
| MS.gene049910 | MS.gene42831 | 0.816335 | 5.83E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene42831 | 0.896401 | 3.82E-76 | -1.69E-46 |
| MS.gene050301 | MS.gene42831 | 0.8558 | 4.95E-62 | -1.69E-46 |
| MS.gene050397 | MS.gene42831 | 0.806363 | 8.53E-50 | -1.69E-46 |
| MS.gene050398 | MS.gene42831 | 0.803475 | 3.42E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene42831 | 0.808348 | 3.24E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene42831 | 0.817427 | 3.32E-52 | -1.69E-46 |
| MS.gene050900 | MS.gene42831 | 0.81514 | 1.08E-51 | -1.69E-46 |
| MS.gene050971 | MS.gene42831 | 0.845518 | 3.86E-59 | -1.69E-46 |
| MS.gene051360 | MS.gene42831 | 0.822084 | 2.86E-53 | -1.69E-46 |
| MS.gene051535 | MS.gene42831 | 0.800553 | 1.37E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene42831 | 0.863633 | 2.17E-64 | -1.69E-46 |
| MS.gene051983 | MS.gene42831 | 0.815272 | 1.01E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene42831 | -0.807249 | 5.54E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene42831 | 0.848246 | 6.93E-60 | -1.69E-46 |
| MS.gene052178 | MS.gene42831 | 0.835678 | 1.46E-56 | -1.69E-46 |
| MS.gene052188 | MS.gene42831 | 0.877395 | 6.50E-69 | -1.69E-46 |
| MS.gene052253 | MS.gene42831 | 0.850943 | 1.22E-60 | -1.69E-46 |
| MS.gene052255 | MS.gene42831 | 0.833236 | 5.99E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene42831 | 0.807749 | 4.34E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene42831 | 0.870965 | 9.79E-67 | -1.69E-46 |
| MS.gene052485 | MS.gene42831 | 0.815228 | 1.03E-51 | -1.69E-46 |
| MS.gene053073 | MS.gene42831 | 0.82679 | 2.24E-54 | -1.69E-46 |
| MS.gene05316 | MS.gene42831 | 0.893094 | 8.66E-75 | -1.69E-46 |
| MS.gene053494 | MS.gene42831 | 0.840311 | 9.38E-58 | -1.69E-46 |
| MS.gene053555 | MS.gene42831 | 0.811096 | 8.30E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene42831 | 0.840691 | 7.47E-58 | -1.69E-46 |
| MS.gene053559 | MS.gene42831 | 0.827122 | 1.86E-54 | -1.69E-46 |
| MS.gene053577 | MS.gene42831 | 0.826176 | 3.13E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene42831 | 0.809388 | 1.94E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene42831 | 0.854404 | 1.26E-61 | -1.69E-46 |
| MS.gene053928 | MS.gene42831 | 0.837208 | 5.95E-57 | -1.69E-46 |
| MS.gene054010 | MS.gene42831 | 0.836511 | 8.97E-57 | -1.69E-46 |
| MS.gene054011 | MS.gene42831 | 0.846525 | 2.06E-59 | -1.69E-46 |
| MS.gene054012 | MS.gene42831 | 0.837688 | 4.49E-57 | -1.69E-46 |
| MS.gene054013 | MS.gene42831 | 0.833018 | 6.79E-56 | -1.69E-46 |
| MS.gene054123 | MS.gene42831 | 0.853446 | 2.38E-61 | -1.69E-46 |
| MS.gene054183 | MS.gene42831 | 0.853317 | 2.59E-61 | -1.69E-46 |
| MS.gene054349 | MS.gene42831 | 0.86449 | 1.17E-64 | -1.69E-46 |
| MS.gene054542 | MS.gene42831 | 0.824464 | 7.96E-54 | -1.69E-46 |
| MS.gene054556 | MS.gene42831 | 0.82309 | 1.67E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene42831 | 0.832016 | 1.20E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene42831 | 0.848244 | 6.94E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene42831 | 0.800668 | 1.29E-48 | -1.69E-46 |
| MS.gene055390 | MS.gene42831 | 0.804874 | 1.75E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene42831 | 0.833604 | 4.85E-56 | -1.69E-46 |
| MS.gene05553 | MS.gene42831 | 0.820745 | 5.83E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene42831 | 0.858744 | 6.67E-63 | -1.69E-46 |
| MS.gene055666 | MS.gene42831 | 0.805938 | 1.05E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene42831 | 0.824597 | 7.41E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene42831 | 0.813872 | 2.05E-51 | -1.69E-46 |
| MS.gene056447 | MS.gene42831 | 0.804579 | 2.02E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene42831 | 0.803269 | 3.78E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene42831 | 0.822718 | 2.04E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene42831 | 0.848705 | 5.17E-60 | -1.69E-46 |
| MS.gene056723 | MS.gene42831 | 0.833764 | 4.42E-56 | -1.69E-46 |
| MS.gene056899 | MS.gene42831 | -0.806415 | 8.32E-50 | -1.69E-46 |
| MS.gene056902 | MS.gene42831 | 0.828516 | 8.61E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene42831 | 0.808474 | 3.04E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene42831 | 0.816704 | 4.82E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene42831 | 0.871862 | 4.95E-67 | -1.69E-46 |
| MS.gene057448 | MS.gene42831 | 0.876933 | 9.41E-69 | -1.69E-46 |
| MS.gene057449 | MS.gene42831 | 0.8722 | 3.82E-67 | -1.69E-46 |
| MS.gene057450 | MS.gene42831 | 0.875757 | 2.40E-68 | -1.69E-46 |
| MS.gene057469 | MS.gene42831 | 0.843254 | 1.57E-58 | -1.69E-46 |
| MS.gene057537 | MS.gene42831 | 0.835151 | 1.98E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene42831 | 0.824396 | 8.26E-54 | -1.69E-46 |
| MS.gene057750 | MS.gene42831 | 0.808501 | 3.00E-50 | -1.69E-46 |
| MS.gene057796 | MS.gene42831 | 0.809951 | 1.47E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene42831 | 0.816856 | 4.46E-52 | -1.69E-46 |
| MS.gene057825 | MS.gene42831 | 0.805915 | 1.06E-49 | -1.69E-46 |
| MS.gene057929 | MS.gene42831 | 0.801632 | 8.22E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene42831 | 0.852035 | 6.01E-61 | -1.69E-46 |
| MS.gene058007 | MS.gene42831 | 0.826709 | 2.34E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene42831 | 0.853473 | 2.33E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene42831 | 0.831405 | 1.70E-55 | -1.69E-46 |
| MS.gene05842 | MS.gene42831 | 0.803971 | 2.70E-49 | -1.69E-46 |
| MS.gene058435 | MS.gene42831 | 0.809518 | 1.82E-50 | -1.69E-46 |
| MS.gene05856 | MS.gene42831 | 0.815418 | 9.34E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene42831 | 0.814421 | 1.55E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene42831 | 0.815809 | 7.64E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene42831 | 0.812535 | 4.04E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene42831 | 0.854663 | 1.06E-61 | -1.69E-46 |
| MS.gene058949 | MS.gene42831 | 0.862766 | 4.02E-64 | -1.69E-46 |
| MS.gene05907 | MS.gene42831 | 0.85265 | 4.02E-61 | -1.69E-46 |
| MS.gene059285 | MS.gene42831 | 0.852393 | 4.75E-61 | -1.69E-46 |
| MS.gene059294 | MS.gene42831 | 0.850508 | 1.62E-60 | -1.69E-46 |
| MS.gene059366 | MS.gene42831 | 0.838405 | 2.93E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene42831 | 0.85289 | 3.43E-61 | -1.69E-46 |
| MS.gene059462 | MS.gene42831 | 0.831062 | 2.07E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene42831 | 0.844505 | 7.25E-59 | -1.69E-46 |
| MS.gene05959 | MS.gene42831 | 0.805536 | 1.27E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene42831 | 0.815982 | 6.99E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene42831 | 0.817581 | 3.06E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene42831 | 0.830455 | 2.91E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene42831 | 0.830122 | 3.51E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene42831 | 0.823988 | 1.03E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene42831 | 0.868213 | 7.71E-66 | -1.69E-46 |
| MS.gene05984 | MS.gene42831 | 0.845454 | 4.02E-59 | -1.69E-46 |
| MS.gene059876 | MS.gene42831 | 0.828557 | 8.41E-55 | -1.69E-46 |
| MS.gene059894 | MS.gene42831 | 0.838982 | 2.08E-57 | -1.69E-46 |
| MS.gene060247 | MS.gene42831 | 0.851502 | 8.51E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene42831 | 0.835955 | 1.24E-56 | -1.69E-46 |
| MS.gene060495 | MS.gene42831 | 0.899521 | 1.83E-77 | -1.69E-46 |
| MS.gene060496 | MS.gene42831 | 0.83421 | 3.42E-56 | -1.69E-46 |
| MS.gene060943 | MS.gene42831 | 0.801952 | 7.06E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene42831 | 0.881827 | 1.74E-70 | -1.69E-46 |
| MS.gene061051 | MS.gene42831 | -0.844371 | 7.88E-59 | -1.69E-46 |
| MS.gene061154 | MS.gene42831 | 0.810073 | 1.38E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene42831 | 0.837654 | 4.58E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42831.t1 | MTR_2g093960 | 92.774 | 429 | 16 | 2 | 1 | 429 | 1 | 414 | 0.0 | 821 |
| MS.gene42831.t1 | MTR_4g059870 | 51.951 | 410 | 143 | 14 | 1 | 382 | 1 | 384 | 1.94e-126 | 375 |
| MS.gene42831.t1 | MTR_8g017210 | 73.469 | 196 | 36 | 3 | 15 | 204 | 39 | 224 | 6.68e-100 | 308 |
| MS.gene42831.t1 | MTR_1g112270 | 77.326 | 172 | 36 | 2 | 35 | 204 | 47 | 217 | 2.94e-98 | 305 |
| MS.gene42831.t1 | MTR_1g016010 | 67.317 | 205 | 50 | 2 | 10 | 214 | 27 | 214 | 9.53e-98 | 300 |
| MS.gene42831.t1 | MTR_2g099990 | 77.143 | 175 | 30 | 2 | 31 | 205 | 45 | 209 | 1.10e-97 | 300 |
| MS.gene42831.t1 | MTR_1g094115 | 76.163 | 172 | 31 | 2 | 32 | 203 | 47 | 208 | 1.30e-94 | 295 |
| MS.gene42831.t1 | MTR_1g112270 | 75.882 | 170 | 31 | 2 | 35 | 204 | 47 | 206 | 3.28e-93 | 292 |
| MS.gene42831.t1 | MTR_2g090745 | 74.556 | 169 | 38 | 2 | 52 | 220 | 18 | 181 | 1.07e-89 | 278 |
| MS.gene42831.t1 | MTR_2g099990 | 85.000 | 140 | 20 | 1 | 65 | 204 | 1 | 139 | 5.00e-87 | 271 |
| MS.gene42831.t1 | MTR_1g094115 | 68.023 | 172 | 28 | 2 | 32 | 203 | 47 | 191 | 1.18e-80 | 258 |
| MS.gene42831.t1 | MTR_2g017720 | 75.652 | 115 | 22 | 2 | 52 | 166 | 324 | 432 | 1.55e-51 | 179 |
| MS.gene42831.t1 | MTR_3g102000 | 76.471 | 85 | 16 | 2 | 79 | 163 | 51 | 131 | 6.61e-36 | 132 |
| MS.gene42831.t1 | MTR_1g093095 | 35.211 | 142 | 80 | 4 | 64 | 194 | 109 | 249 | 3.33e-19 | 87.8 |
| MS.gene42831.t1 | MTR_5g030560 | 75.000 | 44 | 11 | 0 | 52 | 95 | 17 | 60 | 6.17e-19 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42831.t1 | AT3G45260 | 77.487 | 191 | 34 | 1 | 31 | 221 | 38 | 219 | 4.93e-106 | 321 |
| MS.gene42831.t1 | AT3G45260 | 77.487 | 191 | 34 | 1 | 31 | 221 | 38 | 219 | 4.93e-106 | 321 |
| MS.gene42831.t1 | AT5G03150 | 68.981 | 216 | 45 | 5 | 28 | 234 | 49 | 251 | 3.68e-102 | 313 |
| MS.gene42831.t1 | AT3G13810 | 78.771 | 179 | 29 | 1 | 26 | 204 | 45 | 214 | 2.03e-100 | 308 |
| MS.gene42831.t1 | AT3G13810 | 78.771 | 179 | 29 | 1 | 26 | 204 | 64 | 233 | 2.34e-100 | 309 |
| MS.gene42831.t1 | AT3G13810 | 78.771 | 179 | 29 | 1 | 26 | 204 | 64 | 233 | 2.34e-100 | 309 |
| MS.gene42831.t1 | AT3G13810 | 78.771 | 179 | 29 | 1 | 26 | 204 | 59 | 228 | 3.03e-100 | 308 |
| MS.gene42831.t1 | AT3G50700 | 73.134 | 201 | 36 | 5 | 4 | 204 | 14 | 196 | 4.99e-100 | 306 |
| MS.gene42831.t1 | AT3G13810 | 87.742 | 155 | 19 | 0 | 50 | 204 | 66 | 220 | 6.57e-99 | 305 |
| MS.gene42831.t1 | AT3G13810 | 87.742 | 155 | 19 | 0 | 50 | 204 | 80 | 234 | 7.31e-99 | 305 |
| MS.gene42831.t1 | AT1G55110 | 69.154 | 201 | 53 | 1 | 29 | 229 | 60 | 251 | 2.38e-98 | 301 |
| MS.gene42831.t1 | AT1G55110 | 69.154 | 201 | 53 | 1 | 29 | 229 | 60 | 251 | 2.38e-98 | 301 |
| MS.gene42831.t1 | AT1G55110 | 69.154 | 201 | 53 | 1 | 29 | 229 | 60 | 251 | 2.38e-98 | 301 |
| MS.gene42831.t1 | AT5G60470 | 63.927 | 219 | 60 | 3 | 16 | 224 | 23 | 232 | 6.09e-98 | 301 |
| MS.gene42831.t1 | AT5G66730 | 78.613 | 173 | 27 | 2 | 32 | 204 | 32 | 194 | 6.44e-98 | 302 |
| MS.gene42831.t1 | AT5G60470 | 63.927 | 219 | 60 | 3 | 16 | 224 | 27 | 236 | 7.39e-98 | 300 |
| MS.gene42831.t1 | AT1G03840 | 70.312 | 192 | 44 | 3 | 31 | 219 | 40 | 221 | 3.29e-96 | 298 |
| MS.gene42831.t1 | AT4G02670 | 74.576 | 177 | 36 | 1 | 32 | 208 | 55 | 222 | 4.10e-96 | 294 |
| MS.gene42831.t1 | AT4G02670 | 74.576 | 177 | 36 | 1 | 32 | 208 | 53 | 220 | 4.44e-96 | 294 |
| MS.gene42831.t1 | AT5G60470 | 70.492 | 183 | 45 | 1 | 51 | 224 | 45 | 227 | 1.53e-95 | 294 |
| MS.gene42831.t1 | AT1G03840 | 69.792 | 192 | 43 | 3 | 31 | 219 | 40 | 219 | 4.06e-95 | 295 |
| MS.gene42831.t1 | AT1G14580 | 73.446 | 177 | 37 | 2 | 32 | 208 | 53 | 219 | 9.32e-95 | 293 |
| MS.gene42831.t1 | AT1G14580 | 73.446 | 177 | 37 | 2 | 32 | 208 | 53 | 219 | 9.32e-95 | 293 |
| MS.gene42831.t1 | AT1G14580 | 73.446 | 177 | 37 | 2 | 32 | 208 | 67 | 233 | 1.28e-94 | 293 |
| MS.gene42831.t1 | AT5G44160 | 73.596 | 178 | 37 | 2 | 31 | 208 | 36 | 203 | 3.79e-94 | 291 |
| MS.gene42831.t1 | AT2G02080 | 69.189 | 185 | 47 | 2 | 24 | 208 | 46 | 220 | 1.31e-93 | 291 |
| MS.gene42831.t1 | AT2G02080 | 69.189 | 185 | 47 | 2 | 24 | 208 | 46 | 220 | 1.31e-93 | 291 |
| MS.gene42831.t1 | AT2G02080 | 69.189 | 185 | 47 | 2 | 24 | 208 | 46 | 220 | 1.31e-93 | 291 |
| MS.gene42831.t1 | AT2G02080 | 69.189 | 185 | 47 | 2 | 24 | 208 | 46 | 220 | 1.31e-93 | 291 |
| MS.gene42831.t1 | AT2G02070 | 76.301 | 173 | 31 | 2 | 32 | 204 | 52 | 214 | 7.42e-93 | 292 |
| MS.gene42831.t1 | AT2G02070 | 76.301 | 173 | 31 | 2 | 32 | 204 | 52 | 214 | 7.42e-93 | 292 |
| MS.gene42831.t1 | AT5G44160 | 75.152 | 165 | 40 | 1 | 44 | 208 | 1 | 164 | 4.96e-91 | 282 |
| MS.gene42831.t1 | AT2G02080 | 78.571 | 140 | 29 | 1 | 65 | 204 | 1 | 139 | 6.55e-83 | 261 |
| MS.gene42831.t1 | AT2G02080 | 78.571 | 140 | 29 | 1 | 65 | 204 | 1 | 139 | 6.55e-83 | 261 |
| MS.gene42831.t1 | AT1G25250 | 53.476 | 187 | 65 | 4 | 22 | 195 | 12 | 189 | 2.54e-66 | 217 |
| MS.gene42831.t1 | AT2G01940 | 45.455 | 220 | 91 | 3 | 27 | 226 | 39 | 249 | 4.75e-65 | 215 |
| MS.gene42831.t1 | AT1G68130 | 54.651 | 172 | 68 | 2 | 25 | 195 | 34 | 196 | 7.67e-65 | 214 |
| MS.gene42831.t1 | AT1G25250 | 60.274 | 146 | 56 | 2 | 52 | 195 | 21 | 166 | 7.38e-64 | 209 |
| MS.gene42831.t1 | AT2G01940 | 44.796 | 221 | 92 | 4 | 27 | 226 | 39 | 250 | 1.86e-61 | 206 |
| MS.gene42831.t1 | AT1G68130 | 60.000 | 110 | 43 | 1 | 87 | 195 | 1 | 110 | 6.53e-43 | 154 |
| MS.gene42831.t1 | AT1G25250 | 60.360 | 111 | 42 | 2 | 87 | 195 | 1 | 111 | 1.06e-42 | 152 |
| MS.gene42831.t1 | AT2G01940 | 45.000 | 160 | 68 | 3 | 87 | 226 | 1 | 160 | 1.42e-41 | 151 |
| MS.gene42831.t1 | AT1G34370 | 35.948 | 153 | 85 | 4 | 55 | 194 | 19 | 171 | 1.53e-23 | 100 |
| MS.gene42831.t1 | AT1G34370 | 35.948 | 153 | 85 | 4 | 55 | 194 | 229 | 381 | 4.70e-23 | 101 |
| MS.gene42831.t1 | AT1G34370 | 35.948 | 153 | 85 | 4 | 55 | 194 | 229 | 381 | 4.70e-23 | 101 |
| MS.gene42831.t1 | AT5G22890 | 31.953 | 169 | 93 | 4 | 55 | 210 | 202 | 361 | 1.50e-21 | 95.9 |
| MS.gene42831.t1 | AT1G13290 | 36.879 | 141 | 78 | 5 | 64 | 194 | 95 | 234 | 2.06e-19 | 88.6 |
| MS.gene42831.t1 | AT1G51220 | 31.765 | 170 | 98 | 5 | 57 | 218 | 165 | 324 | 5.88e-19 | 87.8 |
| MS.gene42831.t1 | AT1G08290 | 36.765 | 136 | 74 | 5 | 69 | 194 | 179 | 312 | 1.94e-18 | 86.3 |
| MS.gene42831.t1 | AT3G20880 | 33.562 | 146 | 88 | 4 | 57 | 194 | 243 | 387 | 2.36e-18 | 87.0 |
| MS.gene42831.t1 | AT3G57670 | 34.247 | 146 | 87 | 4 | 57 | 194 | 204 | 348 | 6.81e-18 | 85.5 |
| MS.gene42831.t1 | AT1G34790 | 35.616 | 146 | 85 | 4 | 57 | 194 | 132 | 276 | 1.71e-17 | 83.2 |
Find 94 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATTCCTCATGGTTTATT+TGG | 0.044366 | 2.3:-7889800 | MS.gene42831:CDS |
| CTCTTAACTGAATTTGAATT+AGG | 0.133306 | 2.3:+7891215 | None:intergenic |
| GACTTGGACATCCTTGTAAT+TGG | 0.232676 | 2.3:+7889483 | None:intergenic |
| ATGATGAGGAATGTTATTAT+TGG | 0.266493 | 2.3:+7889724 | None:intergenic |
| TTTGGGCTTAATCCGGAATA+TGG | 0.274534 | 2.3:-7889782 | MS.gene42831:CDS |
| GATGAAAATGCACTAGAATT+TGG | 0.285926 | 2.3:+7889692 | None:intergenic |
| TCTTAACTGAATTTGAATTA+GGG | 0.289041 | 2.3:+7891216 | None:intergenic |
| CAAAAGATTGTTTCCAAAGT+TGG | 0.290116 | 2.3:+7889844 | None:intergenic |
| AAGATTAGGGTTTGAGTTTG+AGG | 0.302868 | 2.3:+7891244 | None:intergenic |
| AAACCATGAGGAATATTTCT+TGG | 0.325294 | 2.3:+7889806 | None:intergenic |
| TTCGTTGTCATCAGTGATTT+TGG | 0.328085 | 2.3:+7891009 | None:intergenic |
| GAATTAGGGTTAGGAAGATT+AGG | 0.332160 | 2.3:+7891230 | None:intergenic |
| AACAACTTGCCTGGTGTTCC+TGG | 0.334241 | 2.3:+7891179 | None:intergenic |
| GTCGATGTAGCTGTAGGTTT+TGG | 0.340159 | 2.3:+7890944 | None:intergenic |
| ATATTCCTCATGGTTTATTT+GGG | 0.341816 | 2.3:-7889799 | MS.gene42831:CDS |
| TGATGAGGAATGTTATTATT+GGG | 0.351177 | 2.3:+7889725 | None:intergenic |
| TTAGACTTAGTCCACACTTT+TGG | 0.355942 | 2.3:-7889650 | MS.gene42831:CDS |
| TGACCTGGCCCACCATATTC+CGG | 0.356666 | 2.3:+7889770 | None:intergenic |
| AGAGCAATCACTTCTGAATC+TGG | 0.369008 | 2.3:+7891036 | None:intergenic |
| AGAGCTTTAGGAGACCTAAC+AGG | 0.369422 | 2.3:-7890814 | MS.gene42831:CDS |
| GAAACAAGCTGGAGGTGATT+AGG | 0.369571 | 2.3:-7890888 | MS.gene42831:CDS |
| AATTAGGGTTAGGAAGATTA+GGG | 0.370819 | 2.3:+7891231 | None:intergenic |
| CCCATGAATGTTTCTTGACC+TGG | 0.371544 | 2.3:+7889755 | None:intergenic |
| CATGACCCTAGTAGAGCTTT+AGG | 0.371731 | 2.3:-7890826 | MS.gene42831:CDS |
| TGGTGCACGCAGCTCTTCTC+TGG | 0.394181 | 2.3:+7890847 | None:intergenic |
| CACAGAAGGCTCTGTGAGTT+AGG | 0.397082 | 2.3:+7889918 | None:intergenic |
| ACTGAATTTGAATTAGGGTT+AGG | 0.405640 | 2.3:+7891221 | None:intergenic |
| CAGAGCCTTCTGTGAATCCT+TGG | 0.414644 | 2.3:-7889909 | MS.gene42831:CDS |
| TGGTTTATTTGGGCTTAATC+CGG | 0.427189 | 2.3:-7889789 | MS.gene42831:CDS |
| AATATGCAGTTCAATCTGAT+TGG | 0.433651 | 2.3:-7890726 | MS.gene42831:CDS |
| TTTCTTTGCTTAAGCTTCCA+TGG | 0.433993 | 2.3:+7890907 | None:intergenic |
| ACGAACTTGCAAAGTGAGTT+TGG | 0.438218 | 2.3:-7889227 | MS.gene42831:CDS |
| ACTAGAGATTTCCTTGGTGT+TGG | 0.443089 | 2.3:-7889320 | MS.gene42831:CDS |
| CCAGCAGTTATATCCAACTT+TGG | 0.449389 | 2.3:-7889857 | MS.gene42831:CDS |
| AAGTTCGTGACAGATTCTAT+TGG | 0.449453 | 2.3:+7889242 | None:intergenic |
| AGGTCTCCTAAAGCTCTACT+AGG | 0.450218 | 2.3:+7890820 | None:intergenic |
| CCAAAGTTGGATATAACTGC+TGG | 0.453656 | 2.3:+7889857 | None:intergenic |
| ATCAATGGTAATAATGATGC+TGG | 0.454395 | 2.3:-7889425 | MS.gene42831:CDS |
| TGCAAACTTCGCACATGAAA+CGG | 0.459921 | 2.3:+7890986 | None:intergenic |
| TATTCTCAAAACCAATTACA+AGG | 0.463047 | 2.3:-7889494 | MS.gene42831:CDS |
| GAAACATCATTTACAAGTAG+TGG | 0.476541 | 2.3:-7889575 | MS.gene42831:CDS |
| GGCTTAATCCGGAATATGGT+GGG | 0.478513 | 2.3:-7889778 | MS.gene42831:CDS |
| AAACATCATTTACAAGTAGT+GGG | 0.483248 | 2.3:-7889574 | MS.gene42831:CDS |
| AAAGATGATGTCTGAAGAAG+CGG | 0.506812 | 2.3:-7891294 | None:intergenic |
| GCCAGGTCAAGAAACATTCA+TGG | 0.510496 | 2.3:-7889756 | MS.gene42831:CDS |
| AATCCGGAATATGGTGGGCC+AGG | 0.511400 | 2.3:-7889773 | MS.gene42831:CDS |
| TAATTCATCCATTGTCCTTG+TGG | 0.512587 | 2.3:+7889620 | None:intergenic |
| GAAAGCACGGTGAGAAGAAG+TGG | 0.517455 | 2.3:-7890771 | MS.gene42831:CDS |
| TTCAACCAAGGTAACCATGC+TGG | 0.522544 | 2.3:-7889371 | MS.gene42831:CDS |
| AATTTCCAGCATGGTTACCT+TGG | 0.523041 | 2.3:+7889366 | None:intergenic |
| ACAACTACAAAGCTTATCAA+TGG | 0.529480 | 2.3:-7889440 | MS.gene42831:CDS |
| TGCATTGTTGACACGTGACT+TGG | 0.529889 | 2.3:+7889467 | None:intergenic |
| AGCTTAACTAGAGATTTCCT+TGG | 0.532499 | 2.3:-7889326 | MS.gene42831:CDS |
| CTTCATTGAAATTTCCAGCA+TGG | 0.534154 | 2.3:+7889357 | None:intergenic |
| AAGGCTCATAGTAAGATTTG+TGG | 0.535441 | 2.3:-7890703 | MS.gene42831:CDS |
| GTGGAAGGAAGTGCAAGAAT+AGG | 0.537491 | 2.3:-7889887 | MS.gene42831:CDS |
| GCTGGAGGTGATTAGGAAGA+AGG | 0.538892 | 2.3:-7890881 | MS.gene42831:CDS |
| ATGTGCGAAGTTTGCAACAA+GGG | 0.539035 | 2.3:-7890979 | MS.gene42831:CDS |
| TGCAGTTCAATCTGATTGGA+AGG | 0.545468 | 2.3:-7890722 | MS.gene42831:CDS |
| GCTTAAGCAAAGAAACAAGC+TGG | 0.547884 | 2.3:-7890899 | MS.gene42831:CDS |
| GTTTGAGGTGCCTCTGAAGT+TGG | 0.548806 | 2.3:+7891259 | None:intergenic |
| ATATTTACATAGACAAAAGA+AGG | 0.552400 | 2.3:+7891154 | None:intergenic |
| GCACCAAGAAATATTCCTCA+TGG | 0.553675 | 2.3:-7889809 | MS.gene42831:CDS |
| GTTTATTACCACAAGGACAA+TGG | 0.558273 | 2.3:-7889628 | MS.gene42831:CDS |
| CTAAAGCTCTACTAGGGTCA+TGG | 0.559412 | 2.3:+7890827 | None:intergenic |
| TTCTGTGAATCCTTGGTGGA+AGG | 0.562391 | 2.3:-7889902 | MS.gene42831:CDS |
| GGGCTTAATCCGGAATATGG+TGG | 0.562399 | 2.3:-7889779 | MS.gene42831:CDS |
| GACGAGGACACAATCTTCCA+TGG | 0.563267 | 2.3:-7890924 | MS.gene42831:CDS |
| ATTGTGGCACACTATTCTCC+AGG | 0.563269 | 2.3:-7890660 | MS.gene42831:intron |
| AGCCTTCTGTGAATCCTTGG+TGG | 0.572662 | 2.3:-7889906 | MS.gene42831:CDS |
| TCTGATACTTCCAACTTCAG+AGG | 0.574676 | 2.3:-7891269 | MS.gene42831:CDS |
| AGAAGTCTACCAGGAACACC+AGG | 0.578443 | 2.3:-7891188 | MS.gene42831:CDS |
| CATGTGCGAAGTTTGCAACA+AGG | 0.579589 | 2.3:-7890980 | MS.gene42831:CDS |
| AAGAAGGTAAACAACTTGCC+TGG | 0.586101 | 2.3:+7891170 | None:intergenic |
| GTTAAGAAATTGTTCAACCA+AGG | 0.589203 | 2.3:-7889383 | MS.gene42831:CDS |
| TTCCACCAAGGATTCACAGA+AGG | 0.597334 | 2.3:+7889904 | None:intergenic |
| GATTCTATTGGATTGAACCT+AGG | 0.597877 | 2.3:+7889254 | None:intergenic |
| GTCCTCGTCGATGTAGCTGT+AGG | 0.600070 | 2.3:+7890938 | None:intergenic |
| TATCATCTCTTGTTGCAACA+AGG | 0.605854 | 2.3:+7889277 | None:intergenic |
| TTTGGAAGATAACTATGATG+AGG | 0.609010 | 2.3:+7889710 | None:intergenic |
| AACTTGCAAAGTGAGTTTGG+TGG | 0.611112 | 2.3:-7889224 | MS.gene42831:CDS |
| GGTCTCCTAAAGCTCTACTA+GGG | 0.614831 | 2.3:+7890821 | None:intergenic |
| CCAGGTCAAGAAACATTCAT+GGG | 0.615197 | 2.3:-7889755 | MS.gene42831:CDS |
| GAGCTTTAGGAGACCTAACA+GGG | 0.617009 | 2.3:-7890813 | MS.gene42831:CDS |
| AAAGAGTACAGATGTGATTG+TGG | 0.617310 | 2.3:-7890676 | MS.gene42831:CDS |
| AAGCACTTTAGTAGAAAGCA+CGG | 0.627488 | 2.3:-7890784 | MS.gene42831:CDS |
| GTGGTAATAAACCAAAAGTG+TGG | 0.631454 | 2.3:+7889639 | None:intergenic |
| AACATCATTTACAAGTAGTG+GGG | 0.641231 | 2.3:-7889573 | MS.gene42831:CDS |
| TCTTGCACTTCCTTCCACCA+AGG | 0.653269 | 2.3:+7889892 | None:intergenic |
| TGCAACAAGAGATGATACCT+AGG | 0.687869 | 2.3:-7889271 | MS.gene42831:CDS |
| ATGAGTCATCTCCAACACCA+AGG | 0.689337 | 2.3:+7889309 | None:intergenic |
| TTAAGCCCAAATAAACCATG+AGG | 0.695340 | 2.3:+7889794 | None:intergenic |
| TAAGCAAAGAAACAAGCTGG+AGG | 0.718484 | 2.3:-7890896 | MS.gene42831:CDS |
| AACCTACAGCTACATCGACG+AGG | 0.721645 | 2.3:-7890940 | MS.gene42831:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAAATAATTAACAAAG+TGG | + | chr2.3:7890535-7890554 | None:intergenic | 15.0% |
| !!! | AATTTAATCACAGATTTTTT+CGG | - | chr2.3:7890332-7890351 | MS.gene42831:intron | 15.0% |
| !!! | CATTTATTTGTTAATTAAGA+AGG | + | chr2.3:7889434-7889453 | None:intergenic | 15.0% |
| !! | ATATTAAACATCCGTATATT+TGG | - | chr2.3:7890004-7890023 | MS.gene42831:intron | 20.0% |
| !! | ATATTTACATAGACAAAAGA+AGG | + | chr2.3:7889353-7889372 | None:intergenic | 20.0% |
| !! | TCTTAACTGAATTTGAATTA+GGG | + | chr2.3:7889291-7889310 | None:intergenic | 20.0% |
| !!! | AATAATTTTGAGAGTATGAT+AGG | - | chr2.3:7890508-7890527 | MS.gene42831:intron | 20.0% |
| !!! | TAAAGTTTGTTATGAATTCA+CGG | - | chr2.3:7889910-7889929 | MS.gene42831:CDS | 20.0% |
| !!! | TGTTGTTATTTCCAAATATA+CGG | + | chr2.3:7890018-7890037 | None:intergenic | 20.0% |
| ! | AAACATCATTTACAAGTAGT+GGG | - | chr2.3:7890930-7890949 | MS.gene42831:CDS | 25.0% |
| ! | AATATTCCTCATGGTTTATT+TGG | - | chr2.3:7890704-7890723 | MS.gene42831:CDS | 25.0% |
| ! | ATATTCCTCATGGTTTATTT+GGG | - | chr2.3:7890705-7890724 | MS.gene42831:CDS | 25.0% |
| ! | ATCTAACCCCATTTATTAAT+TGG | + | chr2.3:7890238-7890257 | None:intergenic | 25.0% |
| ! | ATGATGAGGAATGTTATTAT+TGG | + | chr2.3:7890783-7890802 | None:intergenic | 25.0% |
| ! | CTCTTAACTGAATTTGAATT+AGG | + | chr2.3:7889292-7889311 | None:intergenic | 25.0% |
| ! | TAATTGGCATGAGAAAAAAA+TGG | + | chr2.3:7890222-7890241 | None:intergenic | 25.0% |
| ! | TATTCTCAAAACCAATTACA+AGG | - | chr2.3:7891010-7891029 | MS.gene42831:CDS | 25.0% |
| ! | TCTCATGCCAATTAATAAAT+GGG | - | chr2.3:7890228-7890247 | MS.gene42831:intron | 25.0% |
| ! | TGATGAGGAATGTTATTATT+GGG | + | chr2.3:7890782-7890801 | None:intergenic | 25.0% |
| ! | TTCTCATGCCAATTAATAAA+TGG | - | chr2.3:7890227-7890246 | MS.gene42831:intron | 25.0% |
| !! | TAGCTTTTACAGAATCAAAA+TGG | + | chr2.3:7889940-7889959 | None:intergenic | 25.0% |
| AAACCATGAGGAATATTTCT+TGG | + | chr2.3:7890701-7890720 | None:intergenic | 30.0% | |
| AACATCATTTACAAGTAGTG+GGG | - | chr2.3:7890931-7890950 | MS.gene42831:CDS | 30.0% | |
| AATATGCAGTTCAATCTGAT+TGG | - | chr2.3:7889778-7889797 | MS.gene42831:CDS | 30.0% | |
| AATTAGGGTTAGGAAGATTA+GGG | + | chr2.3:7889276-7889295 | None:intergenic | 30.0% | |
| ACAACTACAAAGCTTATCAA+TGG | - | chr2.3:7891064-7891083 | MS.gene42831:intron | 30.0% | |
| ACTGAATTTGAATTAGGGTT+AGG | + | chr2.3:7889286-7889305 | None:intergenic | 30.0% | |
| ATCAATGGTAATAATGATGC+TGG | - | chr2.3:7891079-7891098 | MS.gene42831:intron | 30.0% | |
| CAAAAGATTGTTTCCAAAGT+TGG | + | chr2.3:7890663-7890682 | None:intergenic | 30.0% | |
| CTCATGCCAATTAATAAATG+GGG | - | chr2.3:7890229-7890248 | MS.gene42831:intron | 30.0% | |
| CTGTAACTTTGACAAAATCA+GGG | - | chr2.3:7889966-7889985 | MS.gene42831:intron | 30.0% | |
| GAAACATCATTTACAAGTAG+TGG | - | chr2.3:7890929-7890948 | MS.gene42831:CDS | 30.0% | |
| GAGTTTACTATACAGAATCA+CGG | + | chr2.3:7890471-7890490 | None:intergenic | 30.0% | |
| GATGAAAATGCACTAGAATT+TGG | + | chr2.3:7890815-7890834 | None:intergenic | 30.0% | |
| GTTAAGAAATTGTTCAACCA+AGG | - | chr2.3:7891121-7891140 | MS.gene42831:intron | 30.0% | |
| TAAGCATGAGATTAATGCAA+AGG | + | chr2.3:7890309-7890328 | None:intergenic | 30.0% | |
| TCTGTAACTTTGACAAAATC+AGG | - | chr2.3:7889965-7889984 | MS.gene42831:intron | 30.0% | |
| TGTGTGATGATTGATAAATC+AGG | - | chr2.3:7890552-7890571 | MS.gene42831:intron | 30.0% | |
| TTTGGAAGATAACTATGATG+AGG | + | chr2.3:7890797-7890816 | None:intergenic | 30.0% | |
| !!! | ACTTTTGGTTTATTACCACA+AGG | - | chr2.3:7890869-7890888 | MS.gene42831:CDS | 30.0% |
| AAGAGAAAAAGAAGTCTACC+AGG | - | chr2.3:7889307-7889326 | MS.gene42831:CDS | 35.0% | |
| AAGCACTTTAGTAGAAAGCA+CGG | - | chr2.3:7889720-7889739 | MS.gene42831:CDS | 35.0% | |
| AAGGCTCATAGTAAGATTTG+TGG | - | chr2.3:7889801-7889820 | MS.gene42831:CDS | 35.0% | |
| AAGTTCGTGACAGATTCTAT+TGG | + | chr2.3:7891265-7891284 | None:intergenic | 35.0% | |
| AGCTTAACTAGAGATTTCCT+TGG | - | chr2.3:7891178-7891197 | MS.gene42831:CDS | 35.0% | |
| CGGATGTTTAATATAACCGT+CGG | + | chr2.3:7889998-7890017 | None:intergenic | 35.0% | |
| CTTCATTGAAATTTCCAGCA+TGG | + | chr2.3:7891150-7891169 | None:intergenic | 35.0% | |
| GAATTAGGGTTAGGAAGATT+AGG | + | chr2.3:7889277-7889296 | None:intergenic | 35.0% | |
| GATCTAAACATGCACTTAAG+AGG | - | chr2.3:7890085-7890104 | MS.gene42831:intron | 35.0% | |
| GATTCTATTGGATTGAACCT+AGG | + | chr2.3:7891253-7891272 | None:intergenic | 35.0% | |
| GTGGTAATAAACCAAAAGTG+TGG | + | chr2.3:7890868-7890887 | None:intergenic | 35.0% | |
| GTTTATTACCACAAGGACAA+TGG | - | chr2.3:7890876-7890895 | MS.gene42831:CDS | 35.0% | |
| TAATTCATCCATTGTCCTTG+TGG | + | chr2.3:7890887-7890906 | None:intergenic | 35.0% | |
| TATCATCTCTTGTTGCAACA+AGG | + | chr2.3:7891230-7891249 | None:intergenic | 35.0% | |
| TCTACTGCACGATTTAATCA+GGG | - | chr2.3:7890108-7890127 | MS.gene42831:intron | 35.0% | |
| TGGTTTATTTGGGCTTAATC+CGG | - | chr2.3:7890715-7890734 | MS.gene42831:CDS | 35.0% | |
| TTAAGCCCAAATAAACCATG+AGG | + | chr2.3:7890713-7890732 | None:intergenic | 35.0% | |
| TTTCTTTGCTTAAGCTTCCA+TGG | + | chr2.3:7889600-7889619 | None:intergenic | 35.0% | |
| ! | AAAGAGTACAGATGTGATTG+TGG | - | chr2.3:7889828-7889847 | MS.gene42831:CDS | 35.0% |
| ! | AAGATTAGGGTTTGAGTTTG+AGG | + | chr2.3:7889263-7889282 | None:intergenic | 35.0% |
| ! | TCTAGTGCATTTTCATCATC+AGG | - | chr2.3:7890818-7890837 | MS.gene42831:CDS | 35.0% |
| ! | TTAGACTTAGTCCACACTTT+TGG | - | chr2.3:7890854-7890873 | MS.gene42831:CDS | 35.0% |
| ! | TTCGTTGTCATCAGTGATTT+TGG | + | chr2.3:7889498-7889517 | None:intergenic | 35.0% |
| !!! | AGTGCTTTTTTATCCCTGTT+AGG | + | chr2.3:7889707-7889726 | None:intergenic | 35.0% |
| AACTTGCAAAGTGAGTTTGG+TGG | - | chr2.3:7891280-7891299 | MS.gene42831:CDS | 40.0% | |
| AAGAAGGTAAACAACTTGCC+TGG | + | chr2.3:7889337-7889356 | None:intergenic | 40.0% | |
| AATTTCCAGCATGGTTACCT+TGG | + | chr2.3:7891141-7891160 | None:intergenic | 40.0% | |
| ACGAACTTGCAAAGTGAGTT+TGG | - | chr2.3:7891277-7891296 | MS.gene42831:CDS | 40.0% | |
| AGAGCAATCACTTCTGAATC+TGG | + | chr2.3:7889471-7889490 | None:intergenic | 40.0% | |
| ATGTGCGAAGTTTGCAACAA+GGG | - | chr2.3:7889525-7889544 | MS.gene42831:CDS | 40.0% | |
| CCAAAGTTGGATATAACTGC+TGG | + | chr2.3:7890650-7890669 | None:intergenic | 40.0% | |
| CCAGCAGTTATATCCAACTT+TGG | - | chr2.3:7890647-7890666 | MS.gene42831:intron | 40.0% | |
| CCAGGTCAAGAAACATTCAT+GGG | - | chr2.3:7890749-7890768 | MS.gene42831:CDS | 40.0% | |
| GACTTGGACATCCTTGTAAT+TGG | + | chr2.3:7891024-7891043 | None:intergenic | 40.0% | |
| GCACCAAGAAATATTCCTCA+TGG | - | chr2.3:7890695-7890714 | MS.gene42831:CDS | 40.0% | |
| GCTTAAGCAAAGAAACAAGC+TGG | - | chr2.3:7889605-7889624 | MS.gene42831:CDS | 40.0% | |
| GTCTACTGCACGATTTAATC+AGG | - | chr2.3:7890107-7890126 | MS.gene42831:intron | 40.0% | |
| TAAGCAAAGAAACAAGCTGG+AGG | - | chr2.3:7889608-7889627 | MS.gene42831:CDS | 40.0% | |
| TCTGATACTTCCAACTTCAG+AGG | - | chr2.3:7889235-7889254 | MS.gene42831:CDS | 40.0% | |
| TGCAAACTTCGCACATGAAA+CGG | + | chr2.3:7889521-7889540 | None:intergenic | 40.0% | |
| TGCAACAAGAGATGATACCT+AGG | - | chr2.3:7891233-7891252 | MS.gene42831:CDS | 40.0% | |
| TGCAGTTCAATCTGATTGGA+AGG | - | chr2.3:7889782-7889801 | MS.gene42831:CDS | 40.0% | |
| TTTGGGCTTAATCCGGAATA+TGG | - | chr2.3:7890722-7890741 | MS.gene42831:CDS | 40.0% | |
| ! | ACTAGAGATTTCCTTGGTGT+TGG | - | chr2.3:7891184-7891203 | MS.gene42831:CDS | 40.0% |
| AGGTCTCCTAAAGCTCTACT+AGG | + | chr2.3:7889687-7889706 | None:intergenic | 45.0% | |
| ATGAGTCATCTCCAACACCA+AGG | + | chr2.3:7891198-7891217 | None:intergenic | 45.0% | |
| ATTGTGGCACACTATTCTCC+AGG | - | chr2.3:7889844-7889863 | MS.gene42831:CDS | 45.0% | |
| CATGACCCTAGTAGAGCTTT+AGG | - | chr2.3:7889678-7889697 | MS.gene42831:CDS | 45.0% | |
| CATGTGCGAAGTTTGCAACA+AGG | - | chr2.3:7889524-7889543 | MS.gene42831:CDS | 45.0% | |
| CCCATGAATGTTTCTTGACC+TGG | + | chr2.3:7890752-7890771 | None:intergenic | 45.0% | |
| CTAAAGCTCTACTAGGGTCA+TGG | + | chr2.3:7889680-7889699 | None:intergenic | 45.0% | |
| GAAACAAGCTGGAGGTGATT+AGG | - | chr2.3:7889616-7889635 | MS.gene42831:CDS | 45.0% | |
| GCCAGGTCAAGAAACATTCA+TGG | - | chr2.3:7890748-7890767 | MS.gene42831:CDS | 45.0% | |
| GGCTTAATCCGGAATATGGT+GGG | - | chr2.3:7890726-7890745 | MS.gene42831:CDS | 45.0% | |
| GGTCTCCTAAAGCTCTACTA+GGG | + | chr2.3:7889686-7889705 | None:intergenic | 45.0% | |
| GTGCATCATGCTTGTATACC+TGG | + | chr2.3:7889865-7889884 | None:intergenic | 45.0% | |
| TGCATTGTTGACACGTGACT+TGG | + | chr2.3:7891040-7891059 | None:intergenic | 45.0% | |
| TTCAACCAAGGTAACCATGC+TGG | - | chr2.3:7891133-7891152 | MS.gene42831:intron | 45.0% | |
| TTCCACCAAGGATTCACAGA+AGG | + | chr2.3:7890603-7890622 | None:intergenic | 45.0% | |
| TTCTGTGAATCCTTGGTGGA+AGG | - | chr2.3:7890602-7890621 | MS.gene42831:intron | 45.0% | |
| ! | AAAATCAGGGTGTCAACCGA+CGG | - | chr2.3:7889979-7889998 | MS.gene42831:intron | 45.0% |
| ! | GTCGATGTAGCTGTAGGTTT+TGG | + | chr2.3:7889563-7889582 | None:intergenic | 45.0% |
| ! | GTGGAAGGAAGTGCAAGAAT+AGG | - | chr2.3:7890617-7890636 | MS.gene42831:intron | 45.0% |
| !! | AGAGCTTTAGGAGACCTAAC+AGG | - | chr2.3:7889690-7889709 | MS.gene42831:CDS | 45.0% |
| !! | GAGCTTTAGGAGACCTAACA+GGG | - | chr2.3:7889691-7889710 | MS.gene42831:CDS | 45.0% |
| AACAACTTGCCTGGTGTTCC+TGG | + | chr2.3:7889328-7889347 | None:intergenic | 50.0% | |
| AACCTACAGCTACATCGACG+AGG | - | chr2.3:7889564-7889583 | MS.gene42831:CDS | 50.0% | |
| AGAAGTCTACCAGGAACACC+AGG | - | chr2.3:7889316-7889335 | MS.gene42831:CDS | 50.0% | |
| AGCCTTCTGTGAATCCTTGG+TGG | - | chr2.3:7890598-7890617 | MS.gene42831:intron | 50.0% | |
| CACAGAAGGCTCTGTGAGTT+AGG | + | chr2.3:7890589-7890608 | None:intergenic | 50.0% | |
| CAGAGCCTTCTGTGAATCCT+TGG | - | chr2.3:7890595-7890614 | MS.gene42831:intron | 50.0% | |
| CTGAATCTGGATCTGCAGCA+TGG | + | chr2.3:7889458-7889477 | None:intergenic | 50.0% | |
| GACGAGGACACAATCTTCCA+TGG | - | chr2.3:7889580-7889599 | MS.gene42831:CDS | 50.0% | |
| GCTGGAGGTGATTAGGAAGA+AGG | - | chr2.3:7889623-7889642 | MS.gene42831:CDS | 50.0% | |
| GGGCTTAATCCGGAATATGG+TGG | - | chr2.3:7890725-7890744 | MS.gene42831:CDS | 50.0% | |
| TCTTGCACTTCCTTCCACCA+AGG | + | chr2.3:7890615-7890634 | None:intergenic | 50.0% | |
| ! | GAAAGCACGGTGAGAAGAAG+TGG | - | chr2.3:7889733-7889752 | MS.gene42831:CDS | 50.0% |
| !! | GTTTGAGGTGCCTCTGAAGT+TGG | + | chr2.3:7889248-7889267 | None:intergenic | 50.0% |
| GTCCTCGTCGATGTAGCTGT+AGG | + | chr2.3:7889569-7889588 | None:intergenic | 55.0% | |
| TGACCTGGCCCACCATATTC+CGG | + | chr2.3:7890737-7890756 | None:intergenic | 55.0% | |
| !! | AATCCGGAATATGGTGGGCC+AGG | - | chr2.3:7890731-7890750 | MS.gene42831:CDS | 55.0% |
| TGGTGCACGCAGCTCTTCTC+TGG | + | chr2.3:7889660-7889679 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 7889214 | 7891312 | 7889214 | ID=MS.gene42831 |
| chr2.3 | mRNA | 7889214 | 7891312 | 7889214 | ID=MS.gene42831.t1;Parent=MS.gene42831 |
| chr2.3 | exon | 7891162 | 7891312 | 7891162 | ID=MS.gene42831.t1.exon1;Parent=MS.gene42831.t1 |
| chr2.3 | CDS | 7891162 | 7891312 | 7891162 | ID=cds.MS.gene42831.t1;Parent=MS.gene42831.t1 |
| chr2.3 | exon | 7890661 | 7891060 | 7890661 | ID=MS.gene42831.t1.exon2;Parent=MS.gene42831.t1 |
| chr2.3 | CDS | 7890661 | 7891060 | 7890661 | ID=cds.MS.gene42831.t1;Parent=MS.gene42831.t1 |
| chr2.3 | exon | 7889214 | 7889952 | 7889214 | ID=MS.gene42831.t1.exon3;Parent=MS.gene42831.t1 |
| chr2.3 | CDS | 7889214 | 7889952 | 7889214 | ID=cds.MS.gene42831.t1;Parent=MS.gene42831.t1 |
| Gene Sequence |
| Protein sequence |
