AlfalfaGEDB | MS.gene78205

M. sativa cultivar XinJiangDaYe / MS.gene78205

KEGG: -
GO: -
PFAM: PF14299.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78205.t1	XP_013443259.1	73.4	143	35	2	21	161	24	165	3.00E-51	211.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78205.t1	Q9SA16	40.1	152	73	6	25	159	27	177	9.6e-22	104.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78205.t1	B7FH95	73.4	143	35	2	21	161	24	165	2.2e-51	211.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049150	MS.gene78205	0.814533	1.47E-51	-1.69E-46
MS.gene049151	MS.gene78205	0.803212	3.88E-49	-1.69E-46
MS.gene049153	MS.gene78205	0.820342	7.22E-53	-1.69E-46
MS.gene049230	MS.gene78205	0.801055	1.08E-48	-1.69E-46
MS.gene049356	MS.gene78205	0.805534	1.27E-49	-1.69E-46
MS.gene049378	MS.gene78205	0.855067	8.09E-62	-1.69E-46
MS.gene049910	MS.gene78205	0.807727	4.39E-50	-1.69E-46
MS.gene050226	MS.gene78205	0.820318	7.31E-53	-1.69E-46
MS.gene050227	MS.gene78205	0.80485	1.77E-49	-1.69E-46
MS.gene050228	MS.gene78205	0.807826	4.18E-50	-1.69E-46
MS.gene050623	MS.gene78205	-0.81248	4.15E-51	-1.69E-46
MS.gene050642	MS.gene78205	0.80291	4.48E-49	-1.69E-46
MS.gene050762	MS.gene78205	0.843427	1.41E-58	-1.69E-46
MS.gene050763	MS.gene78205	0.845795	3.25E-59	-1.69E-46
MS.gene050900	MS.gene78205	0.812533	4.04E-51	-1.69E-46
MS.gene050971	MS.gene78205	0.822122	2.80E-53	-1.69E-46
MS.gene051535	MS.gene78205	0.821589	3.73E-53	-1.69E-46
MS.gene051860	MS.gene78205	0.801066	1.07E-48	-1.69E-46
MS.gene051983	MS.gene78205	0.826439	2.71E-54	-1.69E-46
MS.gene052077	MS.gene78205	0.88332	4.96E-71	-1.69E-46
MS.gene052188	MS.gene78205	0.809913	1.50E-50	-1.69E-46
MS.gene052340	MS.gene78205	0.817044	4.05E-52	-1.69E-46
MS.gene052389	MS.gene78205	0.801161	1.03E-48	-1.69E-46
MS.gene052426	MS.gene78205	0.804515	2.08E-49	-1.69E-46
MS.gene053073	MS.gene78205	0.803599	3.23E-49	-1.69E-46
MS.gene05316	MS.gene78205	0.864644	1.05E-64	-1.69E-46
MS.gene053405	MS.gene78205	0.806727	7.15E-50	-1.69E-46
MS.gene053494	MS.gene78205	0.879364	1.32E-69	-1.69E-46
MS.gene053577	MS.gene78205	0.813471	2.52E-51	-1.69E-46
MS.gene053836	MS.gene78205	0.804219	2.40E-49	-1.69E-46
MS.gene054183	MS.gene78205	0.814119	1.81E-51	-1.69E-46
MS.gene054349	MS.gene78205	0.852001	6.15E-61	-1.69E-46
MS.gene054379	MS.gene78205	0.854034	1.61E-61	-1.69E-46
MS.gene054542	MS.gene78205	0.804439	2.16E-49	-1.69E-46
MS.gene054930	MS.gene78205	0.856301	3.53E-62	-1.69E-46
MS.gene05510	MS.gene78205	0.808755	2.65E-50	-1.69E-46
MS.gene05553	MS.gene78205	0.804615	1.98E-49	-1.69E-46
MS.gene055701	MS.gene78205	0.869744	2.46E-66	-1.69E-46
MS.gene05595	MS.gene78205	0.808258	3.38E-50	-1.69E-46
MS.gene056979	MS.gene78205	0.820331	7.26E-53	-1.69E-46
MS.gene057199	MS.gene78205	0.806235	9.08E-50	-1.69E-46
MS.gene057396	MS.gene78205	0.83671	7.98E-57	-1.69E-46
MS.gene057610	MS.gene78205	0.824074	9.83E-54	-1.69E-46
MS.gene05761	MS.gene78205	0.817937	2.55E-52	-1.69E-46
MS.gene057749	MS.gene78205	0.800281	1.55E-48	-1.69E-46
MS.gene057750	MS.gene78205	0.826339	2.86E-54	-1.69E-46
MS.gene057929	MS.gene78205	0.818989	1.47E-52	-1.69E-46
MS.gene058146	MS.gene78205	0.815847	7.50E-52	-1.69E-46
MS.gene058435	MS.gene78205	0.841213	5.45E-58	-1.69E-46
MS.gene058503	MS.gene78205	0.825971	3.50E-54	-1.69E-46
MS.gene058505	MS.gene78205	0.807072	6.04E-50	-1.69E-46
MS.gene058710	MS.gene78205	0.807479	4.95E-50	-1.69E-46
MS.gene05872	MS.gene78205	0.815904	7.28E-52	-1.69E-46
MS.gene058949	MS.gene78205	0.842757	2.13E-58	-1.69E-46
MS.gene059285	MS.gene78205	0.855409	6.43E-62	-1.69E-46
MS.gene059420	MS.gene78205	0.817405	3.35E-52	-1.69E-46
MS.gene059609	MS.gene78205	0.819124	1.37E-52	-1.69E-46
MS.gene059674	MS.gene78205	0.800752	1.24E-48	-1.69E-46
MS.gene059807	MS.gene78205	0.845535	3.82E-59	-1.69E-46
MS.gene059876	MS.gene78205	0.841269	5.27E-58	-1.69E-46
MS.gene060084	MS.gene78205	0.813438	2.56E-51	-1.69E-46
MS.gene060247	MS.gene78205	0.805245	1.47E-49	-1.69E-46
MS.gene060495	MS.gene78205	0.862431	5.09E-64	-1.69E-46
MS.gene060683	MS.gene78205	0.825594	4.30E-54	-1.69E-46
MS.gene060685	MS.gene78205	0.818991	1.47E-52	-1.69E-46
MS.gene060802	MS.gene78205	0.820565	6.41E-53	-1.69E-46
MS.gene060940	MS.gene78205	0.834138	3.56E-56	-1.69E-46
MS.gene060942	MS.gene78205	0.809006	2.34E-50	-1.69E-46
MS.gene060943	MS.gene78205	0.836938	6.98E-57	-1.69E-46
MS.gene060998	MS.gene78205	0.835529	1.59E-56	-1.69E-46
MS.gene061002	MS.gene78205	0.829794	4.22E-55	-1.69E-46
MS.gene061049	MS.gene78205	0.821515	3.88E-53	-1.69E-46
MS.gene061159	MS.gene78205	0.80103	1.09E-48	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78205.t1	MTR_0026s0010	73.944	142	34	2	22	161	25	165	8.97e-65	196

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene78205.t1	AT1G10155	41.558	154	71	6	24	159	29	181	1.24e-26	99.4
MS.gene78205.t1	AT1G31200	39.370	127	62	5	47	159	3	128	7.26e-18	75.5

Find 43 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAAAGGACTCAACATTATA+TGG	0.205970	2.2:+32818409	MS.gene78205:CDS
GAGGAAAAGGAACTTCATTT+TGG	0.223452	2.2:+32819818	MS.gene78205:CDS
CATATAATGTTGAGTCCTTT+TGG	0.242983	2.2:-32818408	None:intergenic
TTGTTAATTATATAAATAAA+TGG	0.263676	2.2:-32818339	None:intergenic
GATGGCTAAAGTTGGGAAAA+AGG	0.285093	2.2:+32819700	MS.gene78205:CDS
TCAAGCTTAGCCTCATCTTT+TGG	0.301147	2.2:-32819779	None:intergenic
CAGAGCTGACACAAGTTTCA+TGG	0.313789	2.2:+32819564	MS.gene78205:CDS
GTTTCATGGTTGGAGGTATC+TGG	0.319576	2.2:+32819578	MS.gene78205:CDS
GTTCCCCAACCGAAACCTTC+TGG	0.324475	2.2:-32819659	None:intergenic
AAAGTAAAAGTAGTAGATAA+AGG	0.334874	2.2:+32819602	MS.gene78205:CDS
ATGAAGTATGGAGTGGAAAA+TGG	0.336655	2.2:+32819846	MS.gene78205:CDS
GATATACGTGTGCAGGTTGA+TGG	0.418940	2.2:+32818369	MS.gene78205:CDS
AAGTAAAAGTAGTAGATAAA+GGG	0.432345	2.2:+32819603	MS.gene78205:CDS
AAAAGGACTCAACATTATAT+GGG	0.432953	2.2:+32818410	MS.gene78205:CDS
GGGGAAATGATCCTCGCTAC+TGG	0.437766	2.2:+32818430	MS.gene78205:CDS
AAGCCAGAAGGTTTCGGTTG+GGG	0.447465	2.2:+32819656	MS.gene78205:CDS
TGAAGTGTCAGGTGAGGAAA+AGG	0.454863	2.2:+32819805	MS.gene78205:CDS
TAAGCCAGAAGGTTTCGGTT+GGG	0.457218	2.2:+32819655	MS.gene78205:CDS
GAAGTTAAGCCAGAAGGTTT+CGG	0.458947	2.2:+32819650	MS.gene78205:CDS
GGGAACCAGCACAGATGTAC+TGG	0.493026	2.2:+32819676	MS.gene78205:CDS
AAGCTTGAAATTGAAGTGTC+AGG	0.504703	2.2:+32819794	MS.gene78205:CDS
GAAATATACAGTGAAATTTG+AGG	0.518771	2.2:+32819625	MS.gene78205:CDS
AAAGGGAACATATAAATATG+AGG	0.525864	2.2:+32819718	MS.gene78205:CDS
GACACAAGTTTCATGGTTGG+AGG	0.541826	2.2:+32819571	MS.gene78205:CDS
GCTGACACAAGTTTCATGGT+TGG	0.548605	2.2:+32819568	MS.gene78205:CDS
CATCACCAGTACATCTGTGC+TGG	0.558599	2.2:-32819681	None:intergenic
CGGAGGCGATATACGTGTGC+AGG	0.566543	2.2:+32818362	MS.gene78205:CDS
AAGTGCGAGATAAAACCAAA+AGG	0.571191	2.2:+32818393	MS.gene78205:CDS
TACTGGTGATGGCTAAAGTT+GGG	0.572904	2.2:+32819693	MS.gene78205:CDS
TGGAGTGGAAAATGGAAAGG+AGG	0.576113	2.2:+32819854	MS.gene78205:CDS
TTAAGCCAGAAGGTTTCGGT+TGG	0.579224	2.2:+32819654	MS.gene78205:CDS
GTACTGGTGATGGCTAAAGT+TGG	0.597259	2.2:+32819692	MS.gene78205:CDS
CAGCACAGATGTACTGGTGA+TGG	0.597825	2.2:+32819682	MS.gene78205:CDS
TTTATTTATATAATTAACAA+CGG	0.607777	2.2:+32818342	MS.gene78205:CDS
GTATGGAGTGGAAAATGGAA+AGG	0.608777	2.2:+32819851	MS.gene78205:CDS
ATATACAGTGAAATTTGAGG+TGG	0.617992	2.2:+32819628	MS.gene78205:CDS
GACAACCATTCCAAAAGATG+AGG	0.618532	2.2:+32819769	MS.gene78205:CDS
GAGGTGGAAGTTAAGCCAGA+AGG	0.632622	2.2:+32819644	MS.gene78205:CDS
ATTTATATAATTAACAACGG+AGG	0.643308	2.2:+32818345	MS.gene78205:CDS
AAAGGACTCAACATTATATG+GGG	0.648494	2.2:+32818411	MS.gene78205:CDS
TGAAATTGAAGTGTCAGGTG+AGG	0.650518	2.2:+32819799	MS.gene78205:CDS
GGATTGTATGAAGTATGGAG+TGG	0.655368	2.2:+32819839	MS.gene78205:CDS
GAGGTAGTGCATCTAGAGTG+TGG	0.663909	2.2:+32819737	MS.gene78205:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGAAAAATGTATAAATAAA+GGG	+	chr2.2:32819307-32819326	MS.gene78205:intron	10.0%
!!	TAAGAAAAATGTATAAATAA+AGG	+	chr2.2:32819306-32819325	MS.gene78205:intron	10.0%
!!	TATGTATATGTATAAATTAA+GGG	+	chr2.2:32818764-32818783	MS.gene78205:intron	10.0%
!!	AGAAAAATGTATAAATAAAG+GGG	+	chr2.2:32819308-32819327	MS.gene78205:intron	15.0%
!!	ATTTAGTGTTATATTGTATT+GGG	+	chr2.2:32819372-32819391	MS.gene78205:intron	15.0%
!!	GTATGTATATGTATAAATTA+AGG	+	chr2.2:32818763-32818782	MS.gene78205:intron	15.0%
!!	TATTTAGTGTTATATTGTAT+TGG	+	chr2.2:32819371-32819390	MS.gene78205:intron	15.0%
!!!	AAATCGAAGAAATTTTTTAA+AGG	+	chr2.2:32819164-32819183	MS.gene78205:intron	15.0%
!!!	AATCGAAGAAATTTTTTAAA+GGG	+	chr2.2:32819165-32819184	MS.gene78205:intron	15.0%
!!!	TATGAATTTTATATTTTTGG+CGG	-	chr2.2:32819034-32819053	None:intergenic	15.0%
!!	AAAAAACAACAAATATCAAG+AGG	-	chr2.2:32818565-32818584	None:intergenic	20.0%
!!	AAAGTAAAAGTAGTAGATAA+AGG	+	chr2.2:32819602-32819621	MS.gene78205:CDS	20.0%
!!	AAAGTGGAATATATTGTATT+GGG	+	chr2.2:32819331-32819350	MS.gene78205:intron	20.0%
!!	AAGTAAAAGTAGTAGATAAA+GGG	+	chr2.2:32819603-32819622	MS.gene78205:CDS	20.0%
!!	AGTTGTATTGAAAATTGAAA+TGG	+	chr2.2:32819404-32819423	MS.gene78205:intron	20.0%
!!	ATTTATATAATTAACAACGG+AGG	+	chr2.2:32818345-32818364	MS.gene78205:CDS	20.0%
!!	GTTGTATTGAAAATTGAAAT+GGG	+	chr2.2:32819405-32819424	MS.gene78205:intron	20.0%
!!!	ACATTTTATATACTGATTTG+AGG	+	chr2.2:32818623-32818642	MS.gene78205:intron	20.0%
!!!	CTAAAAACATATTTAAAGCA+TGG	+	chr2.2:32819220-32819239	MS.gene78205:intron	20.0%
!!!	GACACTTTTTTTTAGAAAAT+GGG	+	chr2.2:32819441-32819460	MS.gene78205:intron	20.0%
!!!	TGTTGTTTTTTTTTTTGTTG+AGG	+	chr2.2:32818574-32818593	MS.gene78205:intron	20.0%
!	AAAAGGACTCAACATTATAT+GGG	+	chr2.2:32818410-32818429	MS.gene78205:CDS	25.0%
!	AAAGGGAACATATAAATATG+AGG	+	chr2.2:32819718-32819737	MS.gene78205:CDS	25.0%
!	GAAAGTGGAATATATTGTAT+TGG	+	chr2.2:32819330-32819349	MS.gene78205:intron	25.0%
!	GAAATATACAGTGAAATTTG+AGG	+	chr2.2:32819625-32819644	MS.gene78205:CDS	25.0%
!	TATACATACATATGTGAAGA+AGG	-	chr2.2:32818752-32818771	None:intergenic	25.0%
!	TTATAGATACTAAAAGTCGA+AGG	-	chr2.2:32818851-32818870	None:intergenic	25.0%
!!	AAGTCGAAGGAAAATTTTAT+AGG	-	chr2.2:32818838-32818857	None:intergenic	25.0%
!!	ACATGAGTTGACTTAAAAAT+AGG	-	chr2.2:32818898-32818917	None:intergenic	25.0%
!!	AGTCGAAGGAAAATTTTATA+GGG	-	chr2.2:32818837-32818856	None:intergenic	25.0%
!!	ATGAGTTGACTTAAAAATAG+GGG	-	chr2.2:32818896-32818915	None:intergenic	25.0%
!!	ATTTTGGATTGTATGAAGTA+TGG	+	chr2.2:32819834-32819853	MS.gene78205:CDS	25.0%
!!	CATGAGTTGACTTAAAAATA+GGG	-	chr2.2:32818897-32818916	None:intergenic	25.0%
!!	TACATATGAGTTTGCTTAAA+AGG	+	chr2.2:32819102-32819121	MS.gene78205:intron	25.0%
!!!	GGACACTTTTTTTTAGAAAA+TGG	+	chr2.2:32819440-32819459	MS.gene78205:intron	25.0%
	AAAGGACTCAACATTATATG+GGG	+	chr2.2:32818411-32818430	MS.gene78205:CDS	30.0%
	ATATACAGTGAAATTTGAGG+TGG	+	chr2.2:32819628-32819647	MS.gene78205:CDS	30.0%
	CAAAAGGACTCAACATTATA+TGG	+	chr2.2:32818409-32818428	MS.gene78205:CDS	30.0%
	TGATTAGATAGAGTTCTACA+TGG	-	chr2.2:32818536-32818555	None:intergenic	30.0%
	TGTATAAATAAAGGGGAAAG+TGG	+	chr2.2:32819315-32819334	MS.gene78205:intron	30.0%
	TGTCTTTCACAAATATCAAG+AGG	-	chr2.2:32818606-32818625	None:intergenic	30.0%
	TTAAGGGTTAAATACGTGTT+TGG	+	chr2.2:32818780-32818799	MS.gene78205:intron	30.0%
	TTATGTGCACACATTATGTT+AGG	+	chr2.2:32818696-32818715	MS.gene78205:intron	30.0%
!	AAAAATTCCATCTTCGCTTT+TGG	-	chr2.2:32819133-32819152	None:intergenic	30.0%
!	CATATAATGTTGAGTCCTTT+TGG	-	chr2.2:32818411-32818430	None:intergenic	30.0%
!	TATGAGTTTGCTTAAAAGGA+TGG	+	chr2.2:32819106-32819125	MS.gene78205:intron	30.0%
!	TTGAAATGGGTCAGTTATTT+TGG	+	chr2.2:32819418-32819437	MS.gene78205:intron	30.0%
!!	TGAAATGGGTCAGTTATTTT+GGG	+	chr2.2:32819419-32819438	MS.gene78205:intron	30.0%
	AAGTGCGAGATAAAACCAAA+AGG	+	chr2.2:32818393-32818412	MS.gene78205:CDS	35.0%
	AGAAAATGGGTCAGTTATTC+CGG	+	chr2.2:32819454-32819473	MS.gene78205:intron	35.0%
	ATGAAGTATGGAGTGGAAAA+TGG	+	chr2.2:32819846-32819865	MS.gene78205:CDS	35.0%
	ATGGCTAAAGTTGGGAAAAA+GGG	+	chr2.2:32819701-32819720	MS.gene78205:CDS	35.0%
	CAAAGTAGGTCAATTATACC+GGG	-	chr2.2:32819271-32819290	None:intergenic	35.0%
	CCAAAGTAGGTCAATTATAC+CGG	-	chr2.2:32819272-32819291	None:intergenic	35.0%
	TCTGTGTGAAAAACCAAAGT+AGG	-	chr2.2:32819285-32819304	None:intergenic	35.0%
!	AAGCTTGAAATTGAAGTGTC+AGG	+	chr2.2:32819794-32819813	MS.gene78205:CDS	35.0%
!	GAGGAAAAGGAACTTCATTT+TGG	+	chr2.2:32819818-32819837	MS.gene78205:CDS	35.0%
!	TCTATTATTTTCCAGTAGCG+AGG	-	chr2.2:32818444-32818463	None:intergenic	35.0%
!!!	TCTTTTGGAATGGTTGTCTT+AGG	-	chr2.2:32819767-32819786	None:intergenic	35.0%
	CCGGTATAATTGACCTACTT+TGG	+	chr2.2:32819269-32819288	MS.gene78205:intron	40.0%
	GAAAATGGGTCAGTTATTCC+GGG	+	chr2.2:32819455-32819474	MS.gene78205:intron	40.0%
	GAAGTTAAGCCAGAAGGTTT+CGG	+	chr2.2:32819650-32819669	MS.gene78205:CDS	40.0%
	GACAACCATTCCAAAAGATG+AGG	+	chr2.2:32819769-32819788	MS.gene78205:CDS	40.0%
	GATGGCTAAAGTTGGGAAAA+AGG	+	chr2.2:32819700-32819719	MS.gene78205:CDS	40.0%
	GGATTGTATGAAGTATGGAG+TGG	+	chr2.2:32819839-32819858	MS.gene78205:CDS	40.0%
	GTATGGAGTGGAAAATGGAA+AGG	+	chr2.2:32819851-32819870	MS.gene78205:CDS	40.0%
	GTGCACACATTATGTTAGGA+TGG	+	chr2.2:32818700-32818719	MS.gene78205:intron	40.0%
!	TCAAGCTTAGCCTCATCTTT+TGG	-	chr2.2:32819782-32819801	None:intergenic	40.0%
!	TGAAATTGAAGTGTCAGGTG+AGG	+	chr2.2:32819799-32819818	MS.gene78205:CDS	40.0%
!!	CTTAGCCTCATCTTTTGGAA+TGG	-	chr2.2:32819777-32819796	None:intergenic	40.0%
!!	TACTGGTGATGGCTAAAGTT+GGG	+	chr2.2:32819693-32819712	MS.gene78205:CDS	40.0%
	CAGAGCTGACACAAGTTTCA+TGG	+	chr2.2:32819564-32819583	MS.gene78205:CDS	45.0%
	GACACAAGTTTCATGGTTGG+AGG	+	chr2.2:32819571-32819590	MS.gene78205:CDS	45.0%
	GCTGACACAAGTTTCATGGT+TGG	+	chr2.2:32819568-32819587	MS.gene78205:CDS	45.0%
	GTAGGTCAATTATACCGGGA+CGG	-	chr2.2:32819267-32819286	None:intergenic	45.0%
	TAAGCCAGAAGGTTTCGGTT+GGG	+	chr2.2:32819655-32819674	MS.gene78205:CDS	45.0%
	TGGAGTGGAAAATGGAAAGG+AGG	+	chr2.2:32819854-32819873	MS.gene78205:CDS	45.0%
	TTAAGCCAGAAGGTTTCGGT+TGG	+	chr2.2:32819654-32819673	MS.gene78205:CDS	45.0%
!	GATATACGTGTGCAGGTTGA+TGG	+	chr2.2:32818369-32818388	MS.gene78205:CDS	45.0%
!	TGAAGTGTCAGGTGAGGAAA+AGG	+	chr2.2:32819805-32819824	MS.gene78205:CDS	45.0%
!!	GTACTGGTGATGGCTAAAGT+TGG	+	chr2.2:32819692-32819711	MS.gene78205:CDS	45.0%
!!	GTTTCATGGTTGGAGGTATC+TGG	+	chr2.2:32819578-32819597	MS.gene78205:CDS	45.0%
!!	TTGTTAATTATATAAATAAA+TGG	-	chr2.2:32818342-32818361	None:intergenic	5.0%
!!	TTTATTTATATAATTAACAA+CGG	+	chr2.2:32818342-32818361	MS.gene78205:CDS	5.0%
!!!	AAATATGAATTTTATATTTT+TGG	-	chr2.2:32819037-32819056	None:intergenic	5.0%
	AAATACTACTCCCTCCCTCC+CGG	-	chr2.2:32819476-32819495	None:intergenic	50.0%
	AAGCCAGAAGGTTTCGGTTG+GGG	+	chr2.2:32819656-32819675	MS.gene78205:CDS	50.0%
	AATGGGTCAGTTATTCCGGG+AGG	+	chr2.2:32819458-32819477	MS.gene78205:intron	50.0%
	ATGGGTCAGTTATTCCGGGA+GGG	+	chr2.2:32819459-32819478	MS.gene78205:intron	50.0%
	CATCACCAGTACATCTGTGC+TGG	-	chr2.2:32819684-32819703	None:intergenic	50.0%
	GAGGTGGAAGTTAAGCCAGA+AGG	+	chr2.2:32819644-32819663	MS.gene78205:CDS	50.0%
	GGATGGACCAAAAGCGAAGA+TGG	+	chr2.2:32819123-32819142	MS.gene78205:intron	50.0%
	GTCTAATACTACCTCCGTCC+CGG	+	chr2.2:32819250-32819269	MS.gene78205:intron	50.0%
!	CAGCACAGATGTACTGGTGA+TGG	+	chr2.2:32819682-32819701	MS.gene78205:CDS	50.0%
!	GAGGTAGTGCATCTAGAGTG+TGG	+	chr2.2:32819737-32819756	MS.gene78205:CDS	50.0%
	GGGAACCAGCACAGATGTAC+TGG	+	chr2.2:32819676-32819695	MS.gene78205:CDS	55.0%
	GGGGAAATGATCCTCGCTAC+TGG	+	chr2.2:32818430-32818449	MS.gene78205:CDS	55.0%
	GGTCAATTATACCGGGACGG+AGG	-	chr2.2:32819264-32819283	None:intergenic	55.0%
	GTCAGTTATTCCGGGAGGGA+GGG	+	chr2.2:32819463-32819482	MS.gene78205:intron	55.0%
	GTTCCCCAACCGAAACCTTC+TGG	-	chr2.2:32819662-32819681	None:intergenic	55.0%
	CGGAGGCGATATACGTGTGC+AGG	+	chr2.2:32818362-32818381	MS.gene78205:CDS	60.0%
	GGTCAGTTATTCCGGGAGGG+AGG	+	chr2.2:32819462-32819481	MS.gene78205:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.2	gene	32818333	32819916	32818333	ID=MS.gene78205
chr2.2	mRNA	32818333	32819916	32818333	ID=MS.gene78205.t1;Parent=MS.gene78205
chr2.2	exon	32818333	32818463	32818333	ID=MS.gene78205.t1.exon1;Parent=MS.gene78205.t1
chr2.2	CDS	32818333	32818463	32818333	ID=cds.MS.gene78205.t1;Parent=MS.gene78205.t1
chr2.2	exon	32819556	32819916	32819556	ID=MS.gene78205.t1.exon2;Parent=MS.gene78205.t1
chr2.2	CDS	32819556	32819916	32819556	ID=cds.MS.gene78205.t1;Parent=MS.gene78205.t1

Gene Sequence

>MS.gene78205

ATGCTGCCATTTATTTATATAATTAACAACGGAGGCGATATACGTGTGCAGGTTGATGGCAAGTGCGAGATAAAACCAAAAGGACTCAACATTATATGGGGAAATGATCCTCGCTACTGGAAAATAATAGAGTAAGTTGCATTCATATATTGTTATTACAATGAAAATGATAACTTATTGATTTTATTTGCATACACAAACCATGTAGAACTCTATCTAATCAAATGTACCTCTTGATATTTGTTGTTTTTTTTTTTGTTGAGGAAAGTACCTCTTGATATTTGTGAAAGACATTTTATATACTGATTTGAGGAATGATATGATATTATAGTATGATTTGTCTGAATACATGAGCAAAATCTATTATGTGCACACATTATGTTAGGATGGTAATTAAATTATATAATTTTATTTTTCCTTCTTCACATATGTATGTATATGTATAAATTAAGGGTTAAATACGTGTTTGGTCTCTATAAATATATCGATTTTTTTTTAAGTCCCTATAAAATTTTCCTTCGACTTTTAGTATCTATAAAATTTTCTGTCATCACTTTTGACCCCTATTTTTAAGTCAACTCATGTGTAGCTTTTGTATTTTTTAATAAAATTGTGCAAAAATATGTAGAATATTGTAAAAATCTCTTTAAAAGAAATTTGAATTTTTAACAAAATATAAATTAAATATGAATTTTTAACCGCCAAAAATATAAAATTCATATTTAATTTATGTTTTGTTAAAAAATTTATAAAAAAAAAAAAAGAATTTTACATATGAGTTTGCTTAAAAGGATGGACCAAAAGCGAAGATGGAATTTTTTTTAAGACTAAAAATCGAAGAAATTTTTTAAAGGGATTAAAATGACAAGTTTGTATATTTATAAGAACTAAAAACATATTTAAAGCATGGATTAATTGTCTAATACTACCTCCGTCCCGGTATAATTGACCTACTTTGGTTTTTCACACAGATTAAGAAAAATGTATAAATAAAGGGGAAAGTGGAATATATTGTATTGGGAATGATAAAAGTAGTATTATTTAGTGTTATATTGTATTGGGAATGATGAAAGTTGTATTGAAAATTGAAATGGGTCAGTTATTTTGGGACACTTTTTTTTAGAAAATGGGTCAGTTATTCCGGGAGGGAGGGAGTAGTATTTTTTTTGATAGAGATGTGTTAATTAAATAATTAATGTTTCTATATGCATGCATTATTTCAGCGAAGTTGCAGAGCTGACACAAGTTTCATGGTTGGAGGTATCTGGTAAAGTAAAAGTAGTAGATAAAGGGAAATATACAGTGAAATTTGAGGTGGAAGTTAAGCCAGAAGGTTTCGGTTGGGGAACCAGCACAGATGTACTGGTGATGGCTAAAGTTGGGAAAAAGGGAACATATAAATATGAGGTAGTGCATCTAGAGTGTGGTACTCCTAAGACAACCATTCCAAAAGATGAGGCTAAGCTTGAAATTGAAGTGTCAGGTGAGGAAAAGGAACTTCATTTTGGATTGTATGAAGTATGGAGTGGAAAATGGAAAGGAGGTTTGAAAATCTACAATGCAGTAGTTGCTAAGACGCCTTAA

Protein sequence

>MS.gene78205.t1

MLPFIYIINNGGDIRVQVDGKCEIKPKGLNIIWGNDPRYWKIIDEVAELTQVSWLEVSGKVKVVDKGKYTVKFEVEVKPEGFGWGTSTDVLVMAKVGKKGTYKYEVVHLECGTPKTTIPKDEAKLEIEVSGEEKELHFGLYEVWSGKWKGGLKIYNAVVAKTP