Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39912.t1 | XP_013468583.1 | 86 | 242 | 5 | 2 | 3 | 215 | 4 | 245 | 1.20E-108 | 402.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39912.t1 | P13089 | 75.5 | 208 | 37 | 7 | 17 | 215 | 41 | 243 | 2.2e-74 | 280.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39912.t1 | B7FGL7 | 86.0 | 242 | 5 | 2 | 3 | 215 | 4 | 245 | 8.8e-109 | 402.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene39912.t1 | TR | AUX/IAA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene39912 | 0.857692 | 1.37E-62 | -1.69E-46 |
| MS.gene049356 | MS.gene39912 | 0.825907 | 3.63E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene39912 | 0.814904 | 1.21E-51 | -1.69E-46 |
| MS.gene049491 | MS.gene39912 | 0.811478 | 6.86E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene39912 | 0.804542 | 2.06E-49 | -1.69E-46 |
| MS.gene049662 | MS.gene39912 | 0.804765 | 1.85E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene39912 | 0.810057 | 1.39E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene39912 | 0.831542 | 1.57E-55 | -1.69E-46 |
| MS.gene049907 | MS.gene39912 | 0.803704 | 3.07E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene39912 | 0.81118 | 7.96E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene39912 | 0.801023 | 1.09E-48 | -1.69E-46 |
| MS.gene050128 | MS.gene39912 | 0.818396 | 2.00E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene39912 | 0.846719 | 1.82E-59 | -1.69E-46 |
| MS.gene050397 | MS.gene39912 | 0.811883 | 5.60E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene39912 | 0.850084 | 2.13E-60 | -1.69E-46 |
| MS.gene050670 | MS.gene39912 | 0.834078 | 3.69E-56 | -1.69E-46 |
| MS.gene050900 | MS.gene39912 | 0.805712 | 1.17E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene39912 | 0.816046 | 6.77E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene39912 | 0.850183 | 2.00E-60 | -1.69E-46 |
| MS.gene051255 | MS.gene39912 | 0.815704 | 8.07E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene39912 | 0.831716 | 1.43E-55 | -1.69E-46 |
| MS.gene051525 | MS.gene39912 | 0.817954 | 2.52E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene39912 | 0.806788 | 6.94E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene39912 | 0.811916 | 5.51E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene39912 | -0.801963 | 7.03E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene39912 | 0.837651 | 4.58E-57 | -1.69E-46 |
| MS.gene052207 | MS.gene39912 | 0.825417 | 4.74E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene39912 | 0.845043 | 5.19E-59 | -1.69E-46 |
| MS.gene052287 | MS.gene39912 | 0.838782 | 2.34E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene39912 | 0.82472 | 6.93E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene39912 | 0.852578 | 4.21E-61 | -1.69E-46 |
| MS.gene052481 | MS.gene39912 | 0.812856 | 3.43E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene39912 | 0.801925 | 7.15E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene39912 | 0.859631 | 3.62E-63 | -1.69E-46 |
| MS.gene052999 | MS.gene39912 | 0.807457 | 5.01E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene39912 | 0.849927 | 2.36E-60 | -1.69E-46 |
| MS.gene053449 | MS.gene39912 | 0.820134 | 8.05E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene39912 | 0.803879 | 2.82E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene39912 | 0.853701 | 2.01E-61 | -1.69E-46 |
| MS.gene053836 | MS.gene39912 | 0.826953 | 2.04E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene39912 | 0.84267 | 2.24E-58 | -1.69E-46 |
| MS.gene054011 | MS.gene39912 | 0.827874 | 1.23E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene39912 | 0.825717 | 4.03E-54 | -1.69E-46 |
| MS.gene054013 | MS.gene39912 | 0.83061 | 2.67E-55 | -1.69E-46 |
| MS.gene054183 | MS.gene39912 | 0.809587 | 1.76E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene39912 | 0.801052 | 1.08E-48 | -1.69E-46 |
| MS.gene054473 | MS.gene39912 | 0.83066 | 2.59E-55 | -1.69E-46 |
| MS.gene054556 | MS.gene39912 | 0.809076 | 2.26E-50 | -1.69E-46 |
| MS.gene05455 | MS.gene39912 | 0.807828 | 4.18E-50 | -1.69E-46 |
| MS.gene054618 | MS.gene39912 | 0.800212 | 1.60E-48 | -1.69E-46 |
| MS.gene055116 | MS.gene39912 | 0.87767 | 5.22E-69 | -1.69E-46 |
| MS.gene055277 | MS.gene39912 | 0.843258 | 1.57E-58 | -1.69E-46 |
| MS.gene055390 | MS.gene39912 | 0.814688 | 1.36E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene39912 | 0.805479 | 1.31E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene39912 | 0.808903 | 2.46E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene39912 | 0.826369 | 2.82E-54 | -1.69E-46 |
| MS.gene055666 | MS.gene39912 | 0.818803 | 1.62E-52 | -1.69E-46 |
| MS.gene055911 | MS.gene39912 | 0.802923 | 4.45E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene39912 | 0.802408 | 5.69E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene39912 | 0.885914 | 5.39E-72 | -1.69E-46 |
| MS.gene056407 | MS.gene39912 | 0.844167 | 8.94E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene39912 | 0.827424 | 1.58E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene39912 | 0.80466 | 1.94E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene39912 | 0.815696 | 8.10E-52 | -1.69E-46 |
| MS.gene056902 | MS.gene39912 | 0.821742 | 3.43E-53 | -1.69E-46 |
| MS.gene056931 | MS.gene39912 | 0.818793 | 1.63E-52 | -1.69E-46 |
| MS.gene056933 | MS.gene39912 | 0.818546 | 1.85E-52 | -1.69E-46 |
| MS.gene056935 | MS.gene39912 | 0.804804 | 1.81E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene39912 | 0.835991 | 1.22E-56 | -1.69E-46 |
| MS.gene057330 | MS.gene39912 | 0.828729 | 7.65E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene39912 | 0.85582 | 4.88E-62 | -1.69E-46 |
| MS.gene057449 | MS.gene39912 | 0.837601 | 4.72E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene39912 | 0.856331 | 3.46E-62 | -1.69E-46 |
| MS.gene057469 | MS.gene39912 | 0.822401 | 2.42E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene39912 | 0.842501 | 2.49E-58 | -1.69E-46 |
| MS.gene057779 | MS.gene39912 | 0.802014 | 6.86E-49 | -1.69E-46 |
| MS.gene057796 | MS.gene39912 | 0.818506 | 1.89E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene39912 | 0.839898 | 1.20E-57 | -1.69E-46 |
| MS.gene058002 | MS.gene39912 | 0.848914 | 4.52E-60 | -1.69E-46 |
| MS.gene058007 | MS.gene39912 | 0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene39912 | 0.853576 | 2.18E-61 | -1.69E-46 |
| MS.gene058293 | MS.gene39912 | 0.817253 | 3.63E-52 | -1.69E-46 |
| MS.gene05842 | MS.gene39912 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene39912 | 0.82408 | 9.80E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene39912 | 0.812692 | 3.73E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene39912 | 0.819518 | 1.11E-52 | -1.69E-46 |
| MS.gene058995 | MS.gene39912 | 0.833115 | 6.42E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene39912 | 0.855034 | 8.27E-62 | -1.69E-46 |
| MS.gene059082 | MS.gene39912 | 0.82407 | 9.85E-54 | -1.69E-46 |
| MS.gene059294 | MS.gene39912 | 0.829775 | 4.26E-55 | -1.69E-46 |
| MS.gene059366 | MS.gene39912 | 0.822369 | 2.46E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene39912 | 0.855731 | 5.18E-62 | -1.69E-46 |
| MS.gene059462 | MS.gene39912 | 0.826774 | 2.26E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene39912 | 0.802031 | 6.80E-49 | -1.69E-46 |
| MS.gene059530 | MS.gene39912 | 0.815121 | 1.09E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene39912 | 0.822624 | 2.14E-53 | -1.69E-46 |
| MS.gene059674 | MS.gene39912 | 0.809481 | 1.85E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene39912 | 0.817263 | 3.61E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene39912 | 0.877072 | 8.43E-69 | -1.69E-46 |
| MS.gene059692 | MS.gene39912 | 0.877882 | 4.40E-69 | -1.69E-46 |
| MS.gene059695 | MS.gene39912 | 0.882961 | 6.71E-71 | -1.69E-46 |
| MS.gene059711 | MS.gene39912 | 0.840754 | 7.19E-58 | -1.69E-46 |
| MS.gene059807 | MS.gene39912 | 0.845079 | 5.08E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene39912 | 0.820825 | 5.59E-53 | -1.69E-46 |
| MS.gene059876 | MS.gene39912 | 0.806913 | 6.53E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene39912 | 0.805792 | 1.12E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene39912 | 0.851228 | 1.02E-60 | -1.69E-46 |
| MS.gene060005 | MS.gene39912 | 0.815918 | 7.23E-52 | -1.69E-46 |
| MS.gene060247 | MS.gene39912 | 0.8077 | 4.45E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene39912 | 0.868395 | 6.74E-66 | -1.69E-46 |
| MS.gene060403 | MS.gene39912 | 0.828755 | 7.54E-55 | -1.69E-46 |
| MS.gene060559 | MS.gene39912 | 0.815267 | 1.01E-51 | -1.69E-46 |
| MS.gene060569 | MS.gene39912 | 0.817372 | 3.41E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene39912 | 0.800476 | 1.42E-48 | -1.69E-46 |
| MS.gene060837 | MS.gene39912 | 0.844087 | 9.39E-59 | -1.69E-46 |
| MS.gene060986 | MS.gene39912 | 0.833835 | 4.24E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene39912 | 0.858779 | 6.52E-63 | -1.69E-46 |
| MS.gene061051 | MS.gene39912 | -0.82901 | 6.54E-55 | -1.69E-46 |
| MS.gene061154 | MS.gene39912 | 0.814655 | 1.38E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39912.t1 | MTR_1g070520 | 85.950 | 242 | 5 | 2 | 3 | 215 | 4 | 245 | 8.99e-148 | 411 |
| MS.gene39912.t1 | MTR_7g096090 | 62.109 | 256 | 50 | 5 | 1 | 215 | 1 | 250 | 7.27e-99 | 287 |
| MS.gene39912.t1 | MTR_1g093240 | 67.130 | 216 | 58 | 6 | 2 | 215 | 32 | 236 | 1.15e-90 | 266 |
| MS.gene39912.t1 | MTR_1g080860 | 76.048 | 167 | 35 | 3 | 53 | 215 | 88 | 253 | 1.32e-84 | 251 |
| MS.gene39912.t1 | MTR_1g093240 | 67.358 | 193 | 50 | 6 | 14 | 204 | 44 | 225 | 1.42e-80 | 241 |
| MS.gene39912.t1 | MTR_1g080860 | 74.359 | 156 | 35 | 3 | 53 | 204 | 88 | 242 | 1.57e-75 | 228 |
| MS.gene39912.t1 | MTR_5g030710 | 64.497 | 169 | 55 | 4 | 49 | 215 | 170 | 335 | 1.03e-68 | 214 |
| MS.gene39912.t1 | MTR_5g067350 | 65.217 | 161 | 52 | 3 | 55 | 215 | 191 | 347 | 1.54e-68 | 213 |
| MS.gene39912.t1 | MTR_6g488150 | 64.375 | 160 | 53 | 2 | 57 | 215 | 98 | 254 | 3.67e-67 | 207 |
| MS.gene39912.t1 | MTR_8g067530 | 64.671 | 167 | 53 | 4 | 51 | 215 | 194 | 356 | 4.42e-67 | 210 |
| MS.gene39912.t1 | MTR_1g093240 | 63.043 | 184 | 55 | 6 | 2 | 183 | 32 | 204 | 5.98e-67 | 204 |
| MS.gene39912.t1 | MTR_2g101500 | 64.417 | 163 | 53 | 4 | 55 | 215 | 167 | 326 | 4.36e-66 | 206 |
| MS.gene39912.t1 | MTR_8g103030 | 61.677 | 167 | 55 | 4 | 53 | 215 | 132 | 293 | 2.16e-64 | 201 |
| MS.gene39912.t1 | MTR_1g040675 | 44.186 | 215 | 66 | 6 | 12 | 204 | 1 | 183 | 1.53e-49 | 160 |
| MS.gene39912.t1 | MTR_1g070830 | 43.043 | 230 | 77 | 5 | 1 | 204 | 1 | 202 | 2.28e-48 | 157 |
| MS.gene39912.t1 | MTR_1g076270 | 46.040 | 202 | 71 | 6 | 9 | 203 | 8 | 178 | 3.03e-48 | 156 |
| MS.gene39912.t1 | MTR_1g093350 | 46.040 | 202 | 71 | 6 | 9 | 203 | 8 | 178 | 3.03e-48 | 156 |
| MS.gene39912.t1 | MTR_1g069495 | 41.791 | 201 | 74 | 5 | 51 | 210 | 65 | 263 | 6.67e-38 | 132 |
| MS.gene39912.t1 | MTR_1g040675 | 41.237 | 194 | 60 | 6 | 12 | 183 | 1 | 162 | 1.67e-37 | 128 |
| MS.gene39912.t1 | MTR_4g011880 | 44.554 | 202 | 75 | 8 | 10 | 207 | 4 | 172 | 9.03e-36 | 124 |
| MS.gene39912.t1 | MTR_2g102490 | 39.594 | 197 | 96 | 8 | 2 | 195 | 4 | 180 | 1.33e-33 | 119 |
| MS.gene39912.t1 | MTR_8g014520 | 42.405 | 158 | 75 | 4 | 57 | 199 | 104 | 260 | 4.99e-30 | 112 |
| MS.gene39912.t1 | MTR_8g014520 | 42.405 | 158 | 75 | 4 | 57 | 199 | 104 | 260 | 5.04e-30 | 112 |
| MS.gene39912.t1 | MTR_2g100780 | 38.043 | 184 | 93 | 5 | 44 | 206 | 80 | 263 | 3.27e-29 | 110 |
| MS.gene39912.t1 | MTR_2g100780 | 38.286 | 175 | 89 | 4 | 44 | 199 | 80 | 254 | 5.21e-29 | 109 |
| MS.gene39912.t1 | MTR_5g067350 | 60.241 | 83 | 31 | 1 | 55 | 137 | 191 | 271 | 2.02e-25 | 100 |
| MS.gene39912.t1 | MTR_6g488150 | 59.494 | 79 | 29 | 1 | 57 | 135 | 98 | 173 | 2.60e-24 | 95.5 |
| MS.gene39912.t1 | MTR_4g124300 | 36.129 | 155 | 65 | 6 | 52 | 200 | 58 | 184 | 8.91e-20 | 83.2 |
| MS.gene39912.t1 | MTR_3g106850 | 30.986 | 142 | 78 | 3 | 60 | 200 | 88 | 210 | 2.03e-19 | 83.2 |
| MS.gene39912.t1 | MTR_1g085750 | 38.835 | 103 | 50 | 1 | 94 | 196 | 81 | 170 | 2.71e-17 | 76.6 |
| MS.gene39912.t1 | MTR_4g115075 | 30.435 | 138 | 73 | 3 | 61 | 198 | 93 | 207 | 2.63e-16 | 74.7 |
| MS.gene39912.t1 | MTR_7g110790 | 37.374 | 99 | 49 | 1 | 98 | 196 | 70 | 155 | 7.74e-16 | 72.4 |
| MS.gene39912.t1 | MTR_1g085750 | 36.667 | 90 | 44 | 1 | 94 | 183 | 81 | 157 | 1.92e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39912.t1 | AT3G23050 | 67.136 | 213 | 52 | 8 | 14 | 215 | 38 | 243 | 1.36e-87 | 258 |
| MS.gene39912.t1 | AT4G14550 | 66.829 | 205 | 56 | 6 | 14 | 215 | 33 | 228 | 4.64e-87 | 256 |
| MS.gene39912.t1 | AT3G04730 | 70.286 | 175 | 39 | 3 | 53 | 215 | 63 | 236 | 1.41e-85 | 253 |
| MS.gene39912.t1 | AT1G04250 | 59.545 | 220 | 68 | 7 | 3 | 215 | 24 | 229 | 4.21e-79 | 236 |
| MS.gene39912.t1 | AT4G14550 | 64.583 | 192 | 57 | 5 | 15 | 204 | 35 | 217 | 8.46e-79 | 236 |
| MS.gene39912.t1 | AT4G29080 | 60.106 | 188 | 62 | 4 | 35 | 214 | 122 | 304 | 6.09e-68 | 211 |
| MS.gene39912.t1 | AT5G65670 | 61.326 | 181 | 64 | 4 | 37 | 215 | 160 | 336 | 5.47e-67 | 209 |
| MS.gene39912.t1 | AT3G23050 | 63.889 | 180 | 48 | 7 | 14 | 183 | 38 | 210 | 1.75e-65 | 201 |
| MS.gene39912.t1 | AT5G65670 | 60.656 | 183 | 64 | 5 | 37 | 215 | 160 | 338 | 5.40e-65 | 204 |
| MS.gene39912.t1 | AT4G14550 | 63.372 | 172 | 51 | 6 | 14 | 182 | 33 | 195 | 6.49e-65 | 199 |
| MS.gene39912.t1 | AT2G22670 | 59.259 | 162 | 61 | 4 | 55 | 214 | 160 | 318 | 1.25e-60 | 192 |
| MS.gene39912.t1 | AT2G22670 | 59.259 | 162 | 61 | 4 | 55 | 214 | 160 | 318 | 1.25e-60 | 192 |
| MS.gene39912.t1 | AT2G22670 | 59.259 | 162 | 61 | 4 | 55 | 214 | 177 | 335 | 1.83e-60 | 192 |
| MS.gene39912.t1 | AT2G22670 | 58.025 | 162 | 61 | 5 | 55 | 214 | 160 | 316 | 2.08e-57 | 184 |
| MS.gene39912.t1 | AT2G22670 | 58.025 | 162 | 61 | 5 | 55 | 214 | 160 | 316 | 2.08e-57 | 184 |
| MS.gene39912.t1 | AT5G43700 | 49.500 | 200 | 72 | 6 | 9 | 204 | 8 | 182 | 3.84e-53 | 169 |
| MS.gene39912.t1 | AT1G04240 | 47.596 | 208 | 74 | 6 | 9 | 204 | 2 | 186 | 7.38e-50 | 160 |
| MS.gene39912.t1 | AT3G23030 | 48.936 | 188 | 58 | 4 | 21 | 203 | 16 | 170 | 2.12e-49 | 159 |
| MS.gene39912.t1 | AT1G04240 | 47.596 | 208 | 74 | 6 | 9 | 204 | 102 | 286 | 1.51e-48 | 160 |
| MS.gene39912.t1 | AT3G23030 | 48.936 | 188 | 58 | 4 | 21 | 203 | 103 | 257 | 1.82e-48 | 159 |
| MS.gene39912.t1 | AT4G14560 | 49.474 | 190 | 59 | 6 | 14 | 200 | 9 | 164 | 6.60e-42 | 140 |
| MS.gene39912.t1 | AT2G33310 | 44.211 | 190 | 84 | 5 | 37 | 209 | 52 | 236 | 2.17e-40 | 138 |
| MS.gene39912.t1 | AT2G33310 | 44.211 | 190 | 84 | 5 | 37 | 209 | 52 | 236 | 2.17e-40 | 138 |
| MS.gene39912.t1 | AT1G15580 | 44.565 | 184 | 65 | 5 | 14 | 196 | 10 | 157 | 4.84e-40 | 135 |
| MS.gene39912.t1 | AT1G04550 | 43.814 | 194 | 80 | 5 | 37 | 210 | 46 | 230 | 8.89e-40 | 136 |
| MS.gene39912.t1 | AT2G33310 | 43.979 | 191 | 84 | 6 | 37 | 209 | 52 | 237 | 6.11e-39 | 134 |
| MS.gene39912.t1 | AT3G15540 | 39.556 | 225 | 85 | 7 | 8 | 210 | 2 | 197 | 1.03e-37 | 130 |
| MS.gene39912.t1 | AT4G14550 | 57.600 | 125 | 43 | 4 | 15 | 137 | 35 | 151 | 1.11e-36 | 127 |
| MS.gene39912.t1 | AT3G23050 | 57.778 | 135 | 41 | 6 | 14 | 138 | 38 | 166 | 2.92e-36 | 125 |
| MS.gene39912.t1 | AT1G52830 | 37.383 | 214 | 85 | 7 | 9 | 204 | 3 | 185 | 6.33e-35 | 122 |
| MS.gene39912.t1 | AT3G16500 | 41.143 | 175 | 87 | 4 | 38 | 199 | 81 | 252 | 1.98e-33 | 121 |
| MS.gene39912.t1 | AT3G16500 | 41.143 | 175 | 87 | 4 | 38 | 199 | 81 | 252 | 2.12e-33 | 121 |
| MS.gene39912.t1 | AT4G28640 | 44.375 | 160 | 71 | 5 | 59 | 204 | 87 | 242 | 8.45e-33 | 119 |
| MS.gene39912.t1 | AT4G28640 | 44.304 | 158 | 70 | 5 | 59 | 202 | 87 | 240 | 1.52e-32 | 118 |
| MS.gene39912.t1 | AT4G28640 | 44.304 | 158 | 70 | 5 | 59 | 202 | 87 | 240 | 1.69e-31 | 117 |
| MS.gene39912.t1 | AT1G51950 | 35.683 | 227 | 104 | 9 | 9 | 199 | 30 | 250 | 4.05e-30 | 112 |
| MS.gene39912.t1 | AT1G04100 | 41.176 | 170 | 69 | 7 | 62 | 204 | 95 | 260 | 6.75e-28 | 106 |
| MS.gene39912.t1 | AT5G25890 | 37.838 | 148 | 68 | 2 | 59 | 206 | 47 | 170 | 3.88e-26 | 99.8 |
| MS.gene39912.t1 | AT3G17600 | 31.875 | 160 | 78 | 4 | 41 | 196 | 22 | 154 | 4.50e-21 | 86.3 |
| MS.gene39912.t1 | AT3G62100 | 38.532 | 109 | 51 | 2 | 90 | 196 | 74 | 168 | 1.42e-17 | 77.4 |
| MS.gene39912.t1 | AT2G46990 | 40.404 | 99 | 45 | 1 | 98 | 196 | 86 | 170 | 2.58e-17 | 76.6 |
| MS.gene39912.t1 | AT4G32280 | 31.579 | 114 | 53 | 3 | 98 | 211 | 119 | 207 | 2.41e-15 | 72.0 |
| MS.gene39912.t1 | AT4G32280 | 25.824 | 182 | 81 | 6 | 59 | 211 | 93 | 249 | 2.98e-15 | 72.8 |
| MS.gene39912.t1 | AT2G46990 | 40.698 | 86 | 37 | 1 | 98 | 183 | 86 | 157 | 1.99e-12 | 63.2 |
| MS.gene39912.t1 | AT3G62100 | 37.500 | 96 | 44 | 2 | 90 | 183 | 74 | 155 | 3.40e-12 | 62.4 |
| MS.gene39912.t1 | AT1G04550 | 35.246 | 122 | 60 | 4 | 37 | 139 | 46 | 167 | 3.88e-12 | 62.8 |
| MS.gene39912.t1 | AT1G15050 | 29.630 | 135 | 76 | 3 | 67 | 201 | 35 | 150 | 1.95e-11 | 60.5 |
| MS.gene39912.t1 | AT1G15050 | 29.630 | 135 | 76 | 3 | 67 | 201 | 67 | 182 | 3.20e-11 | 60.5 |
Find 57 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATCCTTCACTGCTCTTT+TGG | 0.116525 | 1.4:+57941108 | None:intergenic |
| CTAACTTTCACAAAGCTTAT+TGG | 0.117785 | 1.4:+57941056 | None:intergenic |
| GGTAAAGGAGTTAAACATTT+TGG | 0.221116 | 1.4:+57940956 | None:intergenic |
| GCTCTTCTGCTCTCTGATTC+TGG | 0.233246 | 1.4:-57942071 | MS.gene39912:CDS |
| TTGTGAATCCCAAGGCATTA+AGG | 0.313394 | 1.4:-57940268 | MS.gene39912:CDS |
| ACATCTTGAGGTCTACTTTA+CGG | 0.340864 | 1.4:+57941012 | None:intergenic |
| GGAAGTTGCAGGGCTGAAAA+AGG | 0.353058 | 1.4:-57942285 | MS.gene39912:CDS |
| AGCAGAAGAGCCTTCTCCTT+TGG | 0.360991 | 1.4:+57942083 | None:intergenic |
| CCATCTTTGTCTTCATAAGT+TGG | 0.383939 | 1.4:+57940189 | None:intergenic |
| CATGAAATCCTTAATGCCTT+GGG | 0.384985 | 1.4:+57940260 | None:intergenic |
| TCATGAAATCCTTAATGCCT+TGG | 0.406074 | 1.4:+57940259 | None:intergenic |
| CATCTTTGTCTTCATAAGTT+GGG | 0.414636 | 1.4:+57940190 | None:intergenic |
| AGGCTAGGACTTGGATTGCC+AGG | 0.417824 | 1.4:-57942230 | MS.gene39912:CDS |
| TTCTCCTTTGGCTTAAATTG+TGG | 0.418936 | 1.4:+57942095 | None:intergenic |
| AACTTGATAATGGAAGTTGC+AGG | 0.451323 | 1.4:-57942296 | None:intergenic |
| GAATGAGAGTAATAAGTTGA+TGG | 0.457906 | 1.4:-57940238 | MS.gene39912:CDS |
| GGAAAGGAAGCCATTGGACT+AGG | 0.462382 | 1.4:-57939836 | MS.gene39912:intron |
| GCTAAGGCATCAGAGAGCTC+TGG | 0.465095 | 1.4:+57940978 | None:intergenic |
| GGAGGAAAAGATGGTGTTTG+AGG | 0.477721 | 1.4:-57942264 | MS.gene39912:CDS |
| GGGCAGCAAACATGTTCTTA+CGG | 0.483487 | 1.4:+57941129 | None:intergenic |
| TAATGAACAACTTACTTAGC+AGG | 0.499421 | 1.4:+57942038 | None:intergenic |
| CTAAGGCATCAGAGAGCTCT+GGG | 0.519415 | 1.4:+57940979 | None:intergenic |
| AGGTCTACTTTACGGAGGTA+AGG | 0.526416 | 1.4:+57941020 | None:intergenic |
| ATGAAAGGAAAGGAAGCCAT+TGG | 0.526527 | 1.4:-57939842 | MS.gene39912:CDS |
| ACAATTTAAGCCAAAGGAGA+AGG | 0.543283 | 1.4:-57942093 | MS.gene39912:CDS |
| ACTGAACTGAGGCTAGGACT+TGG | 0.544230 | 1.4:-57942239 | MS.gene39912:CDS |
| ATGTTTAACTCCTTTACCAC+AGG | 0.544923 | 1.4:-57940951 | MS.gene39912:intron |
| AAGCTTTGTGAAAGTTAGCA+TGG | 0.545131 | 1.4:-57941051 | MS.gene39912:CDS |
| GGTAACTCTTGTACATCTTG+AGG | 0.548937 | 1.4:+57941000 | None:intergenic |
| TTTGTGAAAGTTAGCATGGA+TGG | 0.550924 | 1.4:-57941047 | MS.gene39912:CDS |
| ACGTATAGGGCACAAGTGGT+AGG | 0.553577 | 1.4:-57941173 | MS.gene39912:intron |
| CCAACTTATGAAGACAAAGA+TGG | 0.567272 | 1.4:-57940189 | MS.gene39912:CDS |
| CGTATAGGGCACAAGTGGTA+GGG | 0.568467 | 1.4:-57941172 | MS.gene39912:intron |
| TGCTTGTCGGTGATGTACCA+TGG | 0.581796 | 1.4:-57940158 | MS.gene39912:CDS |
| TATGTCAGCACCTAGAGCCA+TGG | 0.584052 | 1.4:-57939251 | MS.gene39912:intron |
| GCTGCCCAAAAGAGCAGTGA+AGG | 0.587247 | 1.4:-57941113 | MS.gene39912:CDS |
| ATGAAGACAAAGATGGCGAC+TGG | 0.589440 | 1.4:-57940182 | MS.gene39912:CDS |
| TTCATAAGTTGGGACATAGT+CGG | 0.596025 | 1.4:+57940200 | None:intergenic |
| TTTACGTATCATGAAAGGAA+AGG | 0.596184 | 1.4:-57939852 | MS.gene39912:CDS |
| AGATCCACAATTTAAGCCAA+AGG | 0.598269 | 1.4:-57942099 | MS.gene39912:CDS |
| GGCTAGGACTTGGATTGCCA+GGG | 0.598855 | 1.4:-57942229 | MS.gene39912:CDS |
| AAGCGTTTACGTATCATGAA+AGG | 0.600017 | 1.4:-57939857 | MS.gene39912:CDS |
| GAATTGAAAACTTACTCCCA+TGG | 0.601391 | 1.4:+57940141 | None:intergenic |
| GATGGCGACTGGATGCTTGT+CGG | 0.601801 | 1.4:-57940171 | MS.gene39912:CDS |
| TTACGGAATGACCGCACTGG+TGG | 0.603134 | 1.4:+57941146 | None:intergenic |
| GCTTGTCGGTGATGTACCAT+GGG | 0.605812 | 1.4:-57940157 | MS.gene39912:CDS |
| GAGGAAACTGAACTGAGGCT+AGG | 0.606535 | 1.4:-57942245 | MS.gene39912:CDS |
| TTCTTACGGAATGACCGCAC+TGG | 0.606920 | 1.4:+57941143 | None:intergenic |
| CTGTACGTATAGGGCACAAG+TGG | 0.611935 | 1.4:-57941177 | MS.gene39912:intron |
| ATCATACTAACCTAGTCCAA+TGG | 0.619665 | 1.4:+57939826 | None:intergenic |
| GAAGGAAATTGTGAATCCCA+AGG | 0.620096 | 1.4:-57940276 | MS.gene39912:intron |
| TGAACAACTTACTTAGCAGG+AGG | 0.624213 | 1.4:+57942041 | None:intergenic |
| ACTTGATAATGGAAGTTGCA+GGG | 0.628469 | 1.4:-57942295 | None:intergenic |
| TGGTAGGGTGGCCACCAGTG+CGG | 0.683033 | 1.4:-57941157 | MS.gene39912:CDS |
| ATAGGGCACAAGTGGTAGGG+TGG | 0.690264 | 1.4:-57941169 | MS.gene39912:intron |
| TCTTGAGGTCTACTTTACGG+AGG | 0.703203 | 1.4:+57941015 | None:intergenic |
| TGTTTGAGGAAACTGAACTG+AGG | 0.788719 | 1.4:-57942250 | MS.gene39912:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAAAATATTTATTTTT+TGG | - | chr1.4:57941501-57941520 | MS.gene39912:intron | 0.0% |
| !! | AAATTAAATTTATTCTTTCA+TGG | + | chr1.4:57941110-57941129 | None:intergenic | 10.0% |
| !! | AGTAATGAAATAAATAAAAA+AGG | + | chr1.4:57941429-57941448 | None:intergenic | 10.0% |
| !! | ATATAAATTATTAATCACAA+AGG | + | chr1.4:57939673-57939692 | None:intergenic | 10.0% |
| !! | GTAATGAAATAAATAAAAAA+GGG | + | chr1.4:57941428-57941447 | None:intergenic | 10.0% |
| !!! | AAAGATATTTTTATAAGTAA+AGG | + | chr1.4:57942178-57942197 | None:intergenic | 10.0% |
| !!! | AAATTTAATTTCATAGAAAT+GGG | - | chr1.4:57941119-57941138 | MS.gene39912:CDS | 10.0% |
| !!! | AAGATATTTTTATAAGTAAA+GGG | + | chr1.4:57942177-57942196 | None:intergenic | 10.0% |
| !!! | GAACTATTTTAAAATTTATA+TGG | + | chr1.4:57940052-57940071 | None:intergenic | 10.0% |
| !!! | TAAATTTAATTTCATAGAAA+TGG | - | chr1.4:57941118-57941137 | MS.gene39912:CDS | 10.0% |
| !!! | TTAAAATAGTTCTATATTAA+AGG | - | chr1.4:57940060-57940079 | MS.gene39912:intron | 10.0% |
| !!! | TTTTAATTGTGAATTAAATA+TGG | - | chr1.4:57940001-57940020 | MS.gene39912:intron | 10.0% |
| !! | AAACTATCAACTTTATAATA+AGG | - | chr1.4:57940098-57940117 | MS.gene39912:intron | 15.0% |
| !! | AATTTCATTGCTAAAATAAA+TGG | - | chr1.4:57940192-57940211 | MS.gene39912:CDS | 15.0% |
| !! | ATTATTAATATGTTAGATGA+GGG | - | chr1.4:57940616-57940635 | MS.gene39912:intron | 15.0% |
| !! | GATAACAATAGTATATAATA+AGG | + | chr1.4:57939954-57939973 | None:intergenic | 15.0% |
| !! | TATTATTAATATGTTAGATG+AGG | - | chr1.4:57940615-57940634 | MS.gene39912:intron | 15.0% |
| !! | TTTATATTGAAATTGATTGA+AGG | - | chr1.4:57941221-57941240 | MS.gene39912:intron | 15.0% |
| !!! | AAAATTTGCTATATTGTTAT+GGG | + | chr1.4:57939790-57939809 | None:intergenic | 15.0% |
| !!! | AGCAAAATAGTTTTATAAAA+AGG | + | chr1.4:57940765-57940784 | None:intergenic | 15.0% |
| !!! | CTCTTTTTTTTTTTTTTTGA+AGG | + | chr1.4:57941871-57941890 | None:intergenic | 15.0% |
| !!! | GCAAAATAGTTTTATAAAAA+GGG | + | chr1.4:57940764-57940783 | None:intergenic | 15.0% |
| !!! | TTATGTTCCAATTAATTTTA+TGG | + | chr1.4:57939607-57939626 | None:intergenic | 15.0% |
| !! | AATTATTAATCACAAAGGAA+TGG | + | chr1.4:57939668-57939687 | None:intergenic | 20.0% |
| !! | ACCAAATAAATGAGTTATAT+AGG | + | chr1.4:57942023-57942042 | None:intergenic | 20.0% |
| !! | ACCTATATAACTCATTTATT+TGG | - | chr1.4:57942019-57942038 | MS.gene39912:intron | 20.0% |
| !! | AGATCAATATCAAGTATTAA+TGG | - | chr1.4:57941184-57941203 | MS.gene39912:intron | 20.0% |
| !! | ATAGTTAAAAAAATTACCTG+TGG | + | chr1.4:57940583-57940602 | None:intergenic | 20.0% |
| !! | ATTCAAATGTTTAAAAGTTG+TGG | + | chr1.4:57942127-57942146 | None:intergenic | 20.0% |
| !! | CTTAAAGTAAAAGAAAGTTA+GGG | + | chr1.4:57941928-57941947 | None:intergenic | 20.0% |
| !! | GCAATATTAAGACAAAATTA+AGG | + | chr1.4:57941067-57941086 | None:intergenic | 20.0% |
| !! | GTACAATAAAAACATATAGT+AGG | + | chr1.4:57940132-57940151 | None:intergenic | 20.0% |
| !! | TACTTATAGAAAAAAGTAAG+AGG | + | chr1.4:57939857-57939876 | None:intergenic | 20.0% |
| !! | TATCAAAAAAAAATTACGCA+GGG | - | chr1.4:57940687-57940706 | MS.gene39912:intron | 20.0% |
| !! | TCTTAAAGTAAAAGAAAGTT+AGG | + | chr1.4:57941929-57941948 | None:intergenic | 20.0% |
| !! | TTAATAGTATGCTCATAAAT+TGG | - | chr1.4:57941771-57941790 | MS.gene39912:intron | 20.0% |
| !! | TTATCAAAAAAAAATTACGC+AGG | - | chr1.4:57940686-57940705 | MS.gene39912:intron | 20.0% |
| !!! | AAAAGTCTTATAAATAAGGA+TGG | - | chr1.4:57940983-57941002 | MS.gene39912:CDS | 20.0% |
| !!! | AAACAAACTATCTCTTTTAA+AGG | - | chr1.4:57940879-57940898 | MS.gene39912:intron | 20.0% |
| !!! | AAATTTGCTATATTGTTATG+GGG | + | chr1.4:57939789-57939808 | None:intergenic | 20.0% |
| !!! | AATTTTGTCTTAATATTGCA+TGG | - | chr1.4:57941068-57941087 | MS.gene39912:CDS | 20.0% |
| !!! | CAAAATTTGCTATATTGTTA+TGG | + | chr1.4:57939791-57939810 | None:intergenic | 20.0% |
| !!! | CCAAAAAAGTCTTATAAATA+AGG | - | chr1.4:57940979-57940998 | MS.gene39912:CDS | 20.0% |
| !!! | CCTTATTTATAAGACTTTTT+TGG | + | chr1.4:57940982-57941001 | None:intergenic | 20.0% |
| !!! | TATAATAAATAAGGGTATGT+AGG | + | chr1.4:57940816-57940835 | None:intergenic | 20.0% |
| !!! | TTACTTTAAGATACAATAGA+TGG | - | chr1.4:57941938-57941957 | MS.gene39912:intron | 20.0% |
| !!! | TTCCAATTAATTTTATGGAT+CGG | + | chr1.4:57939602-57939621 | None:intergenic | 20.0% |
| !!! | TTTGGTTCAAACAATTTAAT+TGG | - | chr1.4:57942037-57942056 | MS.gene39912:intron | 20.0% |
| !!! | TTTTTGTTAGCTATATATTG+TGG | + | chr1.4:57941593-57941612 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGAAGGATGTTTA+GGG | + | chr1.4:57941861-57941880 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGAAGGATGTTT+AGG | + | chr1.4:57941862-57941881 | None:intergenic | 20.0% |
| ! | AAAAAAATTACCTGTGGTAA+AGG | + | chr1.4:57940577-57940596 | None:intergenic | 25.0% |
| ! | ATCAAAAAAAAATTACGCAG+GGG | - | chr1.4:57940688-57940707 | MS.gene39912:intron | 25.0% |
| ! | TGACATTCTAAGCAAAATAA+CGG | - | chr1.4:57942225-57942244 | MS.gene39912:CDS | 25.0% |
| ! | TTACGCATGCTTAAATATTT+AGG | + | chr1.4:57939504-57939523 | None:intergenic | 25.0% |
| ! | TTCCGATCCATAAAATTAAT+TGG | - | chr1.4:57939597-57939616 | MS.gene39912:intron | 25.0% |
| !! | GAAAATTCTCAAGTTTTTGA+AGG | + | chr1.4:57940258-57940277 | None:intergenic | 25.0% |
| !! | TAGTTCTATATTAAAGGACA+AGG | - | chr1.4:57940066-57940085 | MS.gene39912:intron | 25.0% |
| !!! | AGACTTTTTTGGTAAAATCA+CGG | + | chr1.4:57940971-57940990 | None:intergenic | 25.0% |
| AAAGCAATACAATCATGAAC+TGG | - | chr1.4:57940231-57940250 | MS.gene39912:CDS | 30.0% | |
| AAATTGGCATTAAGTACAAG+AGG | - | chr1.4:57941787-57941806 | MS.gene39912:intron | 30.0% | |
| ACTAATTGAACTGTACGTAT+AGG | - | chr1.4:57940328-57940347 | MS.gene39912:intron | 30.0% | |
| AGTTCATGATTGTATTGCTT+TGG | + | chr1.4:57940232-57940251 | None:intergenic | 30.0% | |
| ATAGAAAAAAGTAAGAGGCA+AGG | + | chr1.4:57939852-57939871 | None:intergenic | 30.0% | |
| CATCTTTGTCTTCATAAGTT+GGG | + | chr1.4:57941328-57941347 | None:intergenic | 30.0% | |
| CATTCTTCCACTGAATTAAT+TGG | - | chr1.4:57941396-57941415 | MS.gene39912:intron | 30.0% | |
| CTAACTTTCACAAAGCTTAT+TGG | + | chr1.4:57940462-57940481 | None:intergenic | 30.0% | |
| CTAATTGAACTGTACGTATA+GGG | - | chr1.4:57940329-57940348 | MS.gene39912:intron | 30.0% | |
| CTTAATCTTTCTACTAAGGA+AGG | - | chr1.4:57939387-57939406 | MS.gene39912:intron | 30.0% | |
| GAAGCTTAATCTTTCTACTA+AGG | - | chr1.4:57939383-57939402 | MS.gene39912:intron | 30.0% | |
| GGAAAACAACAGAAGTAATA+AGG | - | chr1.4:57939307-57939326 | MS.gene39912:intron | 30.0% | |
| GGTTCAAACAATTTAATTGG+CGG | - | chr1.4:57942040-57942059 | MS.gene39912:intron | 30.0% | |
| TAATGAACAACTTACTTAGC+AGG | + | chr1.4:57939480-57939499 | None:intergenic | 30.0% | |
| TTGAAATTAGTACACGTACT+AGG | + | chr1.4:57941475-57941494 | None:intergenic | 30.0% | |
| TTGCTAAGAACAGAGAATAA+GGG | - | chr1.4:57942073-57942092 | MS.gene39912:CDS | 30.0% | |
| TTTACGTATCATGAAAGGAA+AGG | - | chr1.4:57941663-57941682 | MS.gene39912:intron | 30.0% | |
| ! | AGTCTTATAATTAGAGACAG+AGG | + | chr1.4:57940724-57940743 | None:intergenic | 30.0% |
| ! | GAATGAGAGTAATAAGTTGA+TGG | - | chr1.4:57941277-57941296 | MS.gene39912:intron | 30.0% |
| ! | GGTAAAGGAGTTAAACATTT+TGG | + | chr1.4:57940562-57940581 | None:intergenic | 30.0% |
| !! | TTTATTTTCTTTGTGTCGAC+AGG | - | chr1.4:57941617-57941636 | MS.gene39912:intron | 30.0% |
| !!! | GACTTTTTTGGTAAAATCAC+GGG | + | chr1.4:57940970-57940989 | None:intergenic | 30.0% |
| !!! | TCTTTGTTTTGGTGATTAAG+TGG | + | chr1.4:57941835-57941854 | None:intergenic | 30.0% |
| AAGCGTTTACGTATCATGAA+AGG | - | chr1.4:57941658-57941677 | MS.gene39912:intron | 35.0% | |
| ACAATTTAAGCCAAAGGAGA+AGG | - | chr1.4:57939422-57939441 | MS.gene39912:intron | 35.0% | |
| ACAGAAGTAATAAGGAAGAG+AGG | - | chr1.4:57939315-57939334 | MS.gene39912:intron | 35.0% | |
| ACATCTTGAGGTCTACTTTA+CGG | + | chr1.4:57940506-57940525 | None:intergenic | 35.0% | |
| AGATCCACAATTTAAGCCAA+AGG | - | chr1.4:57939416-57939435 | MS.gene39912:intron | 35.0% | |
| AGTGAAAGAGCGAAATGATA+AGG | + | chr1.4:57940658-57940677 | None:intergenic | 35.0% | |
| ATCATACTAACCTAGTCCAA+TGG | + | chr1.4:57941692-57941711 | None:intergenic | 35.0% | |
| ATGTTTAACTCCTTTACCAC+AGG | - | chr1.4:57940564-57940583 | MS.gene39912:intron | 35.0% | |
| CATGAAATCCTTAATGCCTT+GGG | + | chr1.4:57941258-57941277 | None:intergenic | 35.0% | |
| CCAACTTATGAAGACAAAGA+TGG | - | chr1.4:57941326-57941345 | MS.gene39912:intron | 35.0% | |
| CCATCTTTGTCTTCATAAGT+TGG | + | chr1.4:57941329-57941348 | None:intergenic | 35.0% | |
| CTTGCTAAGAACAGAGAATA+AGG | - | chr1.4:57942072-57942091 | MS.gene39912:CDS | 35.0% | |
| GAATTGAAAACTTACTCCCA+TGG | + | chr1.4:57941377-57941396 | None:intergenic | 35.0% | |
| GAGTACACATCAAGACTAAT+TGG | + | chr1.4:57939765-57939784 | None:intergenic | 35.0% | |
| GTCACTACCAATTAATTCAG+TGG | + | chr1.4:57941406-57941425 | None:intergenic | 35.0% | |
| TCATGAAATCCTTAATGCCT+TGG | + | chr1.4:57941259-57941278 | None:intergenic | 35.0% | |
| TGAAAGTGAAACAAACACTG+TGG | - | chr1.4:57939356-57939375 | MS.gene39912:intron | 35.0% | |
| TGCTAAGAACAGAGAATAAG+GGG | - | chr1.4:57942074-57942093 | MS.gene39912:CDS | 35.0% | |
| TTAGCTATATATTGTGGTCG+TGG | + | chr1.4:57941587-57941606 | None:intergenic | 35.0% | |
| TTTGTGAAAGTTAGCATGGA+TGG | - | chr1.4:57940468-57940487 | MS.gene39912:intron | 35.0% | |
| ! | AAGCTTTGTGAAAGTTAGCA+TGG | - | chr1.4:57940464-57940483 | MS.gene39912:intron | 35.0% |
| ! | GAAGTGCTTGAGTATATACA+TGG | + | chr1.4:57940308-57940327 | None:intergenic | 35.0% |
| ! | TTCATAAGTTGGGACATAGT+CGG | + | chr1.4:57941318-57941337 | None:intergenic | 35.0% |
| ! | TTCTCCTTTGGCTTAAATTG+TGG | + | chr1.4:57939423-57939442 | None:intergenic | 35.0% |
| !! | GTTTAGGGATCTCTTTGTTT+TGG | + | chr1.4:57941846-57941865 | None:intergenic | 35.0% |
| !!! | ATTACTTCTGTTGTTTTCCC+TGG | + | chr1.4:57939306-57939325 | None:intergenic | 35.0% |
| !!! | GGAGTTAAACATTTTGGCTA+AGG | + | chr1.4:57940556-57940575 | None:intergenic | 35.0% |
| ATCACAAAGGAATGGAACAC+AGG | + | chr1.4:57939660-57939679 | None:intergenic | 40.0% | |
| ATGAAAGGAAAGGAAGCCAT+TGG | - | chr1.4:57941673-57941692 | MS.gene39912:intron | 40.0% | |
| CACGTACTAGGTGTAATTGT+TGG | + | chr1.4:57941463-57941482 | None:intergenic | 40.0% | |
| CCATGGAAAAATGCAAGAAC+AGG | - | chr1.4:57942281-57942300 | MS.gene39912:CDS | 40.0% | |
| CGTGCATGTGAATATACACA+TGG | - | chr1.4:57941160-57941179 | MS.gene39912:CDS | 40.0% | |
| GAAGGAAATTGTGAATCCCA+AGG | - | chr1.4:57941239-57941258 | MS.gene39912:intron | 40.0% | |
| GCTGAAAAAGGAGGAAAAGA+TGG | - | chr1.4:57939242-57939261 | MS.gene39912:CDS | 40.0% | |
| GGTAACTCTTGTACATCTTG+AGG | + | chr1.4:57940518-57940537 | None:intergenic | 40.0% | |
| GTGGTTTCTCTGTCTCATTA+TGG | + | chr1.4:57941568-57941587 | None:intergenic | 40.0% | |
| TGAACAACTTACTTAGCAGG+AGG | + | chr1.4:57939477-57939496 | None:intergenic | 40.0% | |
| TGTTTGAGGAAACTGAACTG+AGG | - | chr1.4:57939265-57939284 | MS.gene39912:intron | 40.0% | |
| TTAGAGACAGAGGTAGTAGT+TGG | + | chr1.4:57940714-57940733 | None:intergenic | 40.0% | |
| ! | CCTGTTCTTGCATTTTTCCA+TGG | + | chr1.4:57942284-57942303 | None:intergenic | 40.0% |
| ! | TGATCCTTCACTGCTCTTTT+GGG | + | chr1.4:57940409-57940428 | None:intergenic | 40.0% |
| ! | TTGCATTTTTCCATGGCTCT+AGG | + | chr1.4:57942277-57942296 | None:intergenic | 40.0% |
| ! | TTGTGAATCCCAAGGCATTA+AGG | - | chr1.4:57941247-57941266 | MS.gene39912:intron | 40.0% |
| AGGTCTACTTTACGGAGGTA+AGG | + | chr1.4:57940498-57940517 | None:intergenic | 45.0% | |
| ATGAAGACAAAGATGGCGAC+TGG | - | chr1.4:57941333-57941352 | MS.gene39912:intron | 45.0% | |
| GGAGGAAAAGATGGTGTTTG+AGG | - | chr1.4:57939251-57939270 | MS.gene39912:intron | 45.0% | |
| GGGCAGCAAACATGTTCTTA+CGG | + | chr1.4:57940389-57940408 | None:intergenic | 45.0% | |
| TCTTGAGGTCTACTTTACGG+AGG | + | chr1.4:57940503-57940522 | None:intergenic | 45.0% | |
| ! | CTGATCCTTCACTGCTCTTT+TGG | + | chr1.4:57940410-57940429 | None:intergenic | 45.0% |
| !! | AAAAAAAATAGTATATAATA+AGG | + | chr1.4:57939913-57939932 | None:intergenic | 5.0% |
| !! | AAAAAAATGTATAATAAATA+AGG | + | chr1.4:57940825-57940844 | None:intergenic | 5.0% |
| !! | AAAAAATAAAAAAAATAGTA+AGG | + | chr1.4:57939881-57939900 | None:intergenic | 5.0% |
| !! | AAAAAATGTATAATAAATAA+GGG | + | chr1.4:57940824-57940843 | None:intergenic | 5.0% |
| !!! | TACTATTTTTTTTATTTTTT+TGG | - | chr1.4:57939881-57939900 | MS.gene39912:intron | 5.0% |
| ACGTATAGGGCACAAGTGGT+AGG | - | chr1.4:57940342-57940361 | MS.gene39912:intron | 50.0% | |
| ACTGAACTGAGGCTAGGACT+TGG | - | chr1.4:57939276-57939295 | MS.gene39912:intron | 50.0% | |
| AGCAGAAGAGCCTTCTCCTT+TGG | + | chr1.4:57939435-57939454 | None:intergenic | 50.0% | |
| AGTTGCAGGGCTGAAAAAGG+AGG | - | chr1.4:57939233-57939252 | MS.gene39912:CDS | 50.0% | |
| CGTATAGGGCACAAGTGGTA+GGG | - | chr1.4:57940343-57940362 | MS.gene39912:intron | 50.0% | |
| CTGTACGTATAGGGCACAAG+TGG | - | chr1.4:57940338-57940357 | MS.gene39912:intron | 50.0% | |
| GAGGAAACTGAACTGAGGCT+AGG | - | chr1.4:57939270-57939289 | MS.gene39912:intron | 50.0% | |
| GCTCTTCTGCTCTCTGATTC+TGG | - | chr1.4:57939444-57939463 | MS.gene39912:intron | 50.0% | |
| GCTTGTCGGTGATGTACCAT+GGG | - | chr1.4:57941358-57941377 | MS.gene39912:intron | 50.0% | |
| GGAAAGGAAGCCATTGGACT+AGG | - | chr1.4:57941679-57941698 | MS.gene39912:intron | 50.0% | |
| GGAAGTTGCAGGGCTGAAAA+AGG | - | chr1.4:57939230-57939249 | MS.gene39912:CDS | 50.0% | |
| TATGTCAGCACCTAGAGCCA+TGG | - | chr1.4:57942264-57942283 | MS.gene39912:CDS | 50.0% | |
| TGCTTGTCGGTGATGTACCA+TGG | - | chr1.4:57941357-57941376 | MS.gene39912:intron | 50.0% | |
| TTCTTACGGAATGACCGCAC+TGG | + | chr1.4:57940375-57940394 | None:intergenic | 50.0% | |
| ! | CTAAGGCATCAGAGAGCTCT+GGG | + | chr1.4:57940539-57940558 | None:intergenic | 50.0% |
| AGGCTAGGACTTGGATTGCC+AGG | - | chr1.4:57939285-57939304 | MS.gene39912:intron | 55.0% | |
| ATAGGGCACAAGTGGTAGGG+TGG | - | chr1.4:57940346-57940365 | MS.gene39912:intron | 55.0% | |
| GATGGCGACTGGATGCTTGT+CGG | - | chr1.4:57941344-57941363 | MS.gene39912:intron | 55.0% | |
| GCTGCCCAAAAGAGCAGTGA+AGG | - | chr1.4:57940402-57940421 | MS.gene39912:intron | 55.0% | |
| GGCTAGGACTTGGATTGCCA+GGG | - | chr1.4:57939286-57939305 | MS.gene39912:intron | 55.0% | |
| TTACGGAATGACCGCACTGG+TGG | + | chr1.4:57940372-57940391 | None:intergenic | 55.0% | |
| ! | GCTAAGGCATCAGAGAGCTC+TGG | + | chr1.4:57940540-57940559 | None:intergenic | 55.0% |
| TGGTAGGGTGGCCACCAGTG+CGG | - | chr1.4:57940358-57940377 | MS.gene39912:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 57939228 | 57942309 | 57939228 | ID=MS.gene39912 |
| chr1.4 | mRNA | 57939228 | 57942309 | 57939228 | ID=MS.gene39912.t1;Parent=MS.gene39912 |
| chr1.4 | exon | 57942217 | 57942309 | 57942217 | ID=MS.gene39912.t1.exon1;Parent=MS.gene39912.t1 |
| chr1.4 | CDS | 57942217 | 57942309 | 57942217 | ID=cds.MS.gene39912.t1;Parent=MS.gene39912.t1 |
| chr1.4 | exon | 57942053 | 57942132 | 57942053 | ID=MS.gene39912.t1.exon2;Parent=MS.gene39912.t1 |
| chr1.4 | CDS | 57942053 | 57942132 | 57942053 | ID=cds.MS.gene39912.t1;Parent=MS.gene39912.t1 |
| chr1.4 | exon | 57940952 | 57941187 | 57940952 | ID=MS.gene39912.t1.exon3;Parent=MS.gene39912.t1 |
| chr1.4 | CDS | 57940952 | 57941187 | 57940952 | ID=cds.MS.gene39912.t1;Parent=MS.gene39912.t1 |
| chr1.4 | exon | 57940156 | 57940294 | 57940156 | ID=MS.gene39912.t1.exon4;Parent=MS.gene39912.t1 |
| chr1.4 | CDS | 57940156 | 57940294 | 57940156 | ID=cds.MS.gene39912.t1;Parent=MS.gene39912.t1 |
| chr1.4 | exon | 57939837 | 57939898 | 57939837 | ID=MS.gene39912.t1.exon5;Parent=MS.gene39912.t1 |
| chr1.4 | CDS | 57939837 | 57939898 | 57939837 | ID=cds.MS.gene39912.t1;Parent=MS.gene39912.t1 |
| chr1.4 | exon | 57939228 | 57939265 | 57939228 | ID=MS.gene39912.t1.exon6;Parent=MS.gene39912.t1 |
| chr1.4 | CDS | 57939228 | 57939265 | 57939228 | ID=cds.MS.gene39912.t1;Parent=MS.gene39912.t1 |
| Gene Sequence |
| Protein sequence |
