Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069680.t1 | XP_013452780.1 | 98.4 | 499 | 8 | 0 | 1 | 499 | 1 | 499 | 3.10E-288 | 1000.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069680.t1 | P54767 | 77.2 | 505 | 98 | 2 | 6 | 499 | 4 | 502 | 3.1e-233 | 808.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069680.t1 | A0A072UCM6 | 98.4 | 499 | 8 | 0 | 1 | 499 | 1 | 499 | 2.2e-288 | 1000.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene069680 | 0.875251 | 3.57E-68 | -1.69E-46 |
| MS.gene049151 | MS.gene069680 | 0.835878 | 1.30E-56 | -1.69E-46 |
| MS.gene049153 | MS.gene069680 | 0.868966 | 4.41E-66 | -1.69E-46 |
| MS.gene049260 | MS.gene069680 | 0.865467 | 5.78E-65 | -1.69E-46 |
| MS.gene049346 | MS.gene069680 | 0.833536 | 5.04E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene069680 | 0.815734 | 7.94E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene069680 | 0.807419 | 5.10E-50 | -1.69E-46 |
| MS.gene049491 | MS.gene069680 | 0.805791 | 1.13E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene069680 | 0.868839 | 4.84E-66 | -1.69E-46 |
| MS.gene049910 | MS.gene069680 | 0.830661 | 2.59E-55 | -1.69E-46 |
| MS.gene049915 | MS.gene069680 | 0.828092 | 1.09E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene069680 | 0.854717 | 1.02E-61 | -1.69E-46 |
| MS.gene050226 | MS.gene069680 | 0.804445 | 2.15E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene069680 | 0.876726 | 1.11E-68 | -1.69E-46 |
| MS.gene050397 | MS.gene069680 | 0.814333 | 1.63E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene069680 | 0.80317 | 3.96E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene069680 | 0.827727 | 1.33E-54 | -1.69E-46 |
| MS.gene050464 | MS.gene069680 | 0.802507 | 5.43E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene069680 | 0.817117 | 3.89E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene069680 | 0.807754 | 4.33E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene069680 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene069680 | 0.817794 | 2.74E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene069680 | 0.808712 | 2.71E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene069680 | 0.809983 | 1.44E-50 | -1.69E-46 |
| MS.gene050900 | MS.gene069680 | 0.823049 | 1.71E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene069680 | 0.810103 | 1.36E-50 | -1.69E-46 |
| MS.gene05119 | MS.gene069680 | -0.834329 | 3.19E-56 | -1.69E-46 |
| MS.gene051360 | MS.gene069680 | 0.831388 | 1.72E-55 | -1.69E-46 |
| MS.gene051582 | MS.gene069680 | 0.826365 | 2.82E-54 | -1.69E-46 |
| MS.gene051663 | MS.gene069680 | 0.807128 | 5.88E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene069680 | 0.867333 | 1.48E-65 | -1.69E-46 |
| MS.gene051983 | MS.gene069680 | 0.837585 | 4.77E-57 | -1.69E-46 |
| MS.gene052011 | MS.gene069680 | -0.811507 | 6.76E-51 | -1.69E-46 |
| MS.gene052025 | MS.gene069680 | 0.801325 | 9.50E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene069680 | 0.854059 | 1.58E-61 | -1.69E-46 |
| MS.gene052078 | MS.gene069680 | 0.815009 | 1.15E-51 | -1.69E-46 |
| MS.gene052135 | MS.gene069680 | 0.811603 | 6.45E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene069680 | 0.829495 | 4.99E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene069680 | 0.861999 | 6.91E-64 | -1.69E-46 |
| MS.gene052207 | MS.gene069680 | 0.813257 | 2.81E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene069680 | 0.855105 | 7.89E-62 | -1.69E-46 |
| MS.gene052255 | MS.gene069680 | 0.844485 | 7.34E-59 | -1.69E-46 |
| MS.gene052310 | MS.gene069680 | 0.806894 | 6.59E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene069680 | 0.867269 | 1.55E-65 | -1.69E-46 |
| MS.gene052485 | MS.gene069680 | 0.829192 | 5.91E-55 | -1.69E-46 |
| MS.gene052917 | MS.gene069680 | -0.820519 | 6.57E-53 | -1.69E-46 |
| MS.gene053073 | MS.gene069680 | 0.838765 | 2.37E-57 | -1.69E-46 |
| MS.gene05316 | MS.gene069680 | 0.849788 | 2.58E-60 | -1.69E-46 |
| MS.gene053184 | MS.gene069680 | 0.800732 | 1.26E-48 | -1.69E-46 |
| MS.gene053209 | MS.gene069680 | 0.852349 | 4.89E-61 | -1.69E-46 |
| MS.gene053494 | MS.gene069680 | 0.843432 | 1.41E-58 | -1.69E-46 |
| MS.gene053555 | MS.gene069680 | 0.819142 | 1.36E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene069680 | 0.842385 | 2.67E-58 | -1.69E-46 |
| MS.gene053559 | MS.gene069680 | 0.808165 | 3.54E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene069680 | 0.888644 | 4.92E-73 | -1.69E-46 |
| MS.gene053928 | MS.gene069680 | 0.828202 | 1.03E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene069680 | 0.814314 | 1.64E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene069680 | 0.820877 | 5.44E-53 | -1.69E-46 |
| MS.gene054012 | MS.gene069680 | 0.809546 | 1.79E-50 | -1.69E-46 |
| MS.gene054013 | MS.gene069680 | 0.80454 | 2.06E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene069680 | 0.830032 | 3.69E-55 | -1.69E-46 |
| MS.gene054349 | MS.gene069680 | 0.83326 | 5.91E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene069680 | 0.823119 | 1.64E-53 | -1.69E-46 |
| MS.gene054473 | MS.gene069680 | 0.853711 | 1.99E-61 | -1.69E-46 |
| MS.gene054542 | MS.gene069680 | 0.833954 | 3.96E-56 | -1.69E-46 |
| MS.gene054556 | MS.gene069680 | 0.806869 | 6.67E-50 | -1.69E-46 |
| MS.gene054918 | MS.gene069680 | 0.833085 | 6.53E-56 | -1.69E-46 |
| MS.gene054930 | MS.gene069680 | 0.86532 | 6.43E-65 | -1.69E-46 |
| MS.gene054983 | MS.gene069680 | 0.823847 | 1.11E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene069680 | 0.869133 | 3.89E-66 | -1.69E-46 |
| MS.gene055277 | MS.gene069680 | 0.846093 | 2.70E-59 | -1.69E-46 |
| MS.gene055356 | MS.gene069680 | 0.800382 | 1.48E-48 | -1.69E-46 |
| MS.gene055358 | MS.gene069680 | 0.821511 | 3.88E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene069680 | 0.816193 | 6.27E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene069680 | 0.846703 | 1.84E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene069680 | 0.851488 | 8.59E-61 | -1.69E-46 |
| MS.gene05553 | MS.gene069680 | 0.840192 | 1.01E-57 | -1.69E-46 |
| MS.gene055604 | MS.gene069680 | 0.860643 | 1.79E-63 | -1.69E-46 |
| MS.gene055666 | MS.gene069680 | 0.8506 | 1.53E-60 | -1.69E-46 |
| MS.gene055712 | MS.gene069680 | 0.824179 | 9.29E-54 | -1.69E-46 |
| MS.gene055859 | MS.gene069680 | 0.84197 | 3.44E-58 | -1.69E-46 |
| MS.gene05594 | MS.gene069680 | 0.800683 | 1.28E-48 | -1.69E-46 |
| MS.gene056191 | MS.gene069680 | 0.805094 | 1.58E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene069680 | 0.846455 | 2.15E-59 | -1.69E-46 |
| MS.gene056447 | MS.gene069680 | 0.809865 | 1.53E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene069680 | 0.81856 | 1.84E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene069680 | 0.837713 | 4.42E-57 | -1.69E-46 |
| MS.gene056723 | MS.gene069680 | 0.836174 | 1.09E-56 | -1.69E-46 |
| MS.gene056772 | MS.gene069680 | 0.803042 | 4.21E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene069680 | -0.808297 | 3.32E-50 | -1.69E-46 |
| MS.gene056902 | MS.gene069680 | 0.812637 | 3.83E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene069680 | 0.822013 | 2.97E-53 | -1.69E-46 |
| MS.gene05702 | MS.gene069680 | 0.87614 | 1.77E-68 | -1.69E-46 |
| MS.gene057121 | MS.gene069680 | 0.817927 | 2.56E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene069680 | 0.823452 | 1.37E-53 | -1.69E-46 |
| MS.gene057439 | MS.gene069680 | 0.80634 | 8.63E-50 | -1.69E-46 |
| MS.gene057448 | MS.gene069680 | 0.874764 | 5.23E-68 | -1.69E-46 |
| MS.gene057449 | MS.gene069680 | 0.856383 | 3.34E-62 | -1.69E-46 |
| MS.gene057450 | MS.gene069680 | 0.869752 | 2.45E-66 | -1.69E-46 |
| MS.gene057469 | MS.gene069680 | 0.862217 | 5.93E-64 | -1.69E-46 |
| MS.gene057537 | MS.gene069680 | 0.802546 | 5.33E-49 | -1.69E-46 |
| MS.gene057690 | MS.gene069680 | 0.803002 | 4.29E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene069680 | 0.853818 | 1.86E-61 | -1.69E-46 |
| MS.gene057750 | MS.gene069680 | 0.834485 | 2.92E-56 | -1.69E-46 |
| MS.gene057754 | MS.gene069680 | 0.817788 | 2.75E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene069680 | 0.839335 | 1.69E-57 | -1.69E-46 |
| MS.gene057824 | MS.gene069680 | 0.808782 | 2.61E-50 | -1.69E-46 |
| MS.gene057825 | MS.gene069680 | 0.811499 | 6.79E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene069680 | 0.880571 | 4.92E-70 | -1.69E-46 |
| MS.gene058082 | MS.gene069680 | 0.827531 | 1.49E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene069680 | 0.850742 | 1.39E-60 | -1.69E-46 |
| MS.gene058142 | MS.gene069680 | 0.871467 | 6.68E-67 | -1.69E-46 |
| MS.gene058365 | MS.gene069680 | 0.828577 | 8.32E-55 | -1.69E-46 |
| MS.gene05842 | MS.gene069680 | 0.801013 | 1.10E-48 | -1.69E-46 |
| MS.gene058435 | MS.gene069680 | 0.815021 | 1.14E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene069680 | 0.803808 | 2.92E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene069680 | 0.849794 | 2.57E-60 | -1.69E-46 |
| MS.gene05872 | MS.gene069680 | 0.801501 | 8.74E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene069680 | 0.83834 | 3.05E-57 | -1.69E-46 |
| MS.gene058845 | MS.gene069680 | 0.81092 | 9.07E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene069680 | 0.833983 | 3.90E-56 | -1.69E-46 |
| MS.gene058928 | MS.gene069680 | 0.810148 | 1.33E-50 | -1.69E-46 |
| MS.gene058949 | MS.gene069680 | 0.859876 | 3.05E-63 | -1.69E-46 |
| MS.gene059011 | MS.gene069680 | 0.809636 | 1.72E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene069680 | 0.864897 | 8.73E-65 | -1.69E-46 |
| MS.gene059128 | MS.gene069680 | 0.816418 | 5.59E-52 | -1.69E-46 |
| MS.gene059285 | MS.gene069680 | 0.88732 | 1.58E-72 | -1.69E-46 |
| MS.gene059294 | MS.gene069680 | 0.825387 | 4.82E-54 | -1.69E-46 |
| MS.gene059366 | MS.gene069680 | 0.827802 | 1.28E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene069680 | 0.850113 | 2.09E-60 | -1.69E-46 |
| MS.gene059518 | MS.gene069680 | 0.834136 | 3.57E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene069680 | 0.850584 | 1.54E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene069680 | 0.821748 | 3.42E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene069680 | 0.842743 | 2.15E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene069680 | 0.855755 | 5.10E-62 | -1.69E-46 |
| MS.gene059695 | MS.gene069680 | 0.852853 | 3.51E-61 | -1.69E-46 |
| MS.gene059807 | MS.gene069680 | 0.810206 | 1.29E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene069680 | 0.860739 | 1.67E-63 | -1.69E-46 |
| MS.gene059876 | MS.gene069680 | 0.812529 | 4.05E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene069680 | 0.856814 | 2.49E-62 | -1.69E-46 |
| MS.gene059899 | MS.gene069680 | 0.84 | 1.13E-57 | -1.69E-46 |
| MS.gene059974 | MS.gene069680 | 0.809913 | 1.50E-50 | -1.69E-46 |
| MS.gene060314 | MS.gene069680 | 0.802531 | 5.37E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene069680 | 0.857958 | 1.14E-62 | -1.69E-46 |
| MS.gene060407 | MS.gene069680 | 0.830508 | 2.82E-55 | -1.69E-46 |
| MS.gene060476 | MS.gene069680 | 0.803247 | 3.82E-49 | -1.69E-46 |
| MS.gene060495 | MS.gene069680 | 0.863065 | 3.25E-64 | -1.69E-46 |
| MS.gene060569 | MS.gene069680 | 0.804795 | 1.82E-49 | -1.69E-46 |
| MS.gene060943 | MS.gene069680 | 0.81435 | 1.61E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene069680 | 0.891146 | 5.18E-74 | -1.69E-46 |
| MS.gene061051 | MS.gene069680 | -0.844102 | 9.31E-59 | -1.69E-46 |
| MS.gene061112 | MS.gene069680 | 0.844018 | 9.80E-59 | -1.69E-46 |
| MS.gene061113 | MS.gene069680 | 0.807687 | 4.48E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene069680 | -0.827026 | 1.96E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene069680 | 0.80353 | 3.34E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene069680 | 0.852693 | 3.91E-61 | -1.69E-46 |
| MS.gene061265 | MS.gene069680 | 0.853636 | 2.10E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069680.t1 | MTR_6g075210 | 98.397 | 499 | 8 | 0 | 1 | 499 | 1 | 499 | 0.0 | 1023 |
| MS.gene069680.t1 | MTR_3g064740 | 74.560 | 511 | 115 | 4 | 1 | 499 | 1 | 508 | 0.0 | 785 |
| MS.gene069680.t1 | MTR_5g077090 | 72.561 | 492 | 127 | 2 | 16 | 499 | 4 | 495 | 0.0 | 752 |
| MS.gene069680.t1 | MTR_6g075210 | 98.907 | 366 | 4 | 0 | 134 | 499 | 1 | 366 | 0.0 | 751 |
| MS.gene069680.t1 | MTR_6g075210 | 99.023 | 307 | 3 | 0 | 193 | 499 | 1 | 307 | 0.0 | 628 |
| MS.gene069680.t1 | MTR_3g064740 | 75.188 | 399 | 93 | 1 | 99 | 491 | 1 | 399 | 0.0 | 625 |
| MS.gene069680.t1 | MTR_7g022310 | 26.171 | 363 | 238 | 11 | 84 | 436 | 157 | 499 | 3.85e-20 | 94.0 |
| MS.gene069680.t1 | MTR_5g075840 | 45.977 | 87 | 37 | 1 | 367 | 443 | 30 | 116 | 9.25e-15 | 72.0 |
| MS.gene069680.t1 | MTR_5g075820 | 76.923 | 39 | 9 | 0 | 255 | 293 | 15 | 53 | 3.35e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069680.t1 | AT2G02010 | 77.980 | 495 | 100 | 2 | 1 | 495 | 1 | 486 | 0.0 | 813 |
| MS.gene069680.t1 | AT2G02010 | 77.980 | 495 | 100 | 2 | 1 | 495 | 53 | 538 | 0.0 | 813 |
| MS.gene069680.t1 | AT5G17330 | 76.031 | 509 | 105 | 4 | 1 | 499 | 1 | 502 | 0.0 | 794 |
| MS.gene069680.t1 | AT3G17760 | 78.119 | 489 | 100 | 3 | 14 | 499 | 10 | 494 | 0.0 | 794 |
| MS.gene069680.t1 | AT3G17760 | 78.119 | 489 | 100 | 3 | 14 | 499 | 10 | 494 | 0.0 | 794 |
| MS.gene069680.t1 | AT2G02000 | 75.101 | 494 | 114 | 2 | 1 | 494 | 1 | 485 | 0.0 | 785 |
| MS.gene069680.t1 | AT1G65960 | 76.447 | 501 | 109 | 4 | 1 | 499 | 1 | 494 | 0.0 | 784 |
| MS.gene069680.t1 | AT1G65960 | 76.359 | 368 | 82 | 3 | 134 | 499 | 1 | 365 | 0.0 | 574 |
| MS.gene069680.t1 | AT1G65960 | 76.359 | 368 | 82 | 3 | 134 | 499 | 1 | 365 | 0.0 | 574 |
| MS.gene069680.t1 | AT1G65960 | 76.359 | 368 | 82 | 3 | 134 | 499 | 1 | 365 | 0.0 | 574 |
| MS.gene069680.t1 | AT3G17720 | 74.074 | 162 | 39 | 1 | 94 | 255 | 27 | 185 | 2.46e-82 | 254 |
| MS.gene069680.t1 | AT1G27980 | 24.862 | 362 | 240 | 11 | 84 | 434 | 160 | 500 | 2.16e-17 | 85.5 |
Find 103 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTGTGTTGCAGCCATTT+TGG | 0.165886 | 6.1:-66975653 | MS.gene069680:CDS |
| CTGGTATTGGTTGGGTTGTT+TGG | 0.223066 | 6.1:-66975414 | MS.gene069680:CDS |
| TTCTCTACCCTGATCTTCTA+TGG | 0.227683 | 6.1:-66975501 | MS.gene069680:CDS |
| ATCTGATATGCTGCATCTTT+TGG | 0.270173 | 6.1:+66977656 | None:intergenic |
| CTCAATACTACCAATTTATA+CGG | 0.284916 | 6.1:-66975046 | MS.gene069680:CDS |
| CTGTCCTCCGAGTGGTGATT+AGG | 0.306897 | 6.1:-66974612 | MS.gene069680:CDS |
| TCCTGTCACTACTGAGCTTC+AGG | 0.325572 | 6.1:-66977498 | MS.gene069680:intron |
| CGAAGCCTAGCCGTATAAAT+TGG | 0.327648 | 6.1:+66975036 | None:intergenic |
| GATAAGCCTAACATAGTTAC+TGG | 0.334663 | 6.1:-66976641 | MS.gene069680:CDS |
| AGACTCAAGCTGAGATTCTT+AGG | 0.335479 | 6.1:-66974432 | MS.gene069680:CDS |
| GGTCTTGTTTACCCTGGTAT+TGG | 0.341297 | 6.1:-66975427 | MS.gene069680:CDS |
| TTCTAGATACGTGCGTGAAC+AGG | 0.356943 | 6.1:-66977812 | MS.gene069680:CDS |
| CGGAAATCCCATAGAAGATC+AGG | 0.359620 | 6.1:+66975493 | None:intergenic |
| AAGCTGAGATTCTTAGGTAT+TGG | 0.366104 | 6.1:-66974426 | MS.gene069680:CDS |
| TAACAAGAACTATGTTGATA+TGG | 0.366188 | 6.1:-66977528 | MS.gene069680:CDS |
| CTCGCAGCATCCACATGAAT+TGG | 0.372368 | 6.1:+66975544 | None:intergenic |
| GAGGCATAAAGCTGACTTGC+CGG | 0.372412 | 6.1:-66975392 | MS.gene069680:CDS |
| AGTCAGCGTTGAACCCAAAA+TGG | 0.376738 | 6.1:+66975639 | None:intergenic |
| AATGATGAGTTGATGTTAGA+TGG | 0.378531 | 6.1:-66977629 | MS.gene069680:CDS |
| CATCTATTCAATGCTCCTAT+TGG | 0.380720 | 6.1:-66976782 | MS.gene069680:CDS |
| TGGCTTCATTTGTTACTACT+TGG | 0.383718 | 6.1:-66977589 | MS.gene069680:CDS |
| TGTCCTCCGAGTGGTGATTA+GGG | 0.385035 | 6.1:-66974611 | MS.gene069680:CDS |
| ACCATTTCAACAGCTTTCAA+TGG | 0.408300 | 6.1:+66975688 | None:intergenic |
| AATATGCTACACAGGTTTGT+TGG | 0.409355 | 6.1:-66975783 | MS.gene069680:intron |
| ATATGCTACACAGGTTTGTT+GGG | 0.411704 | 6.1:-66975782 | MS.gene069680:intron |
| AAAATACGGGTGGATCGTTC+CGG | 0.414220 | 6.1:-66974668 | MS.gene069680:CDS |
| TTGTTTACCCTGGTATTGGT+TGG | 0.425703 | 6.1:-66975423 | MS.gene069680:CDS |
| AACGCTGACTGGAGAGTTTG+AGG | 0.427297 | 6.1:-66975626 | MS.gene069680:CDS |
| TGTTTACCCTGGTATTGGTT+GGG | 0.431991 | 6.1:-66975422 | MS.gene069680:CDS |
| TATTGGAAGAAGCTTGTTGA+TGG | 0.434589 | 6.1:-66974409 | MS.gene069680:CDS |
| GAGAAATTCAATGTGAAAGT+TGG | 0.439670 | 6.1:+66975328 | None:intergenic |
| AAGGAAGGAATTGAGAAAAC+AGG | 0.440850 | 6.1:-66974793 | MS.gene069680:CDS |
| TTCATTTGTTACTACTTGGA+TGG | 0.447228 | 6.1:-66977585 | MS.gene069680:CDS |
| GTACTTTGAGGTTGAGCTAA+AGG | 0.449977 | 6.1:-66975746 | MS.gene069680:CDS |
| TGGAAAACCAAGGCTTAACT+TGG | 0.451331 | 6.1:-66977609 | MS.gene069680:CDS |
| TTAGCTCCAGTAACTATGTT+AGG | 0.451511 | 6.1:+66976635 | None:intergenic |
| GCAGACCATCTGAGAAAATA+CGG | 0.454351 | 6.1:-66974682 | MS.gene069680:CDS |
| GCAGTTTCCTCTGCACCAAT+AGG | 0.455267 | 6.1:+66976767 | None:intergenic |
| GGAGGATTTCAGCTGTAGCT+TGG | 0.457484 | 6.1:-66974590 | MS.gene069680:CDS |
| TCTCTACCCTGATCTTCTAT+GGG | 0.463816 | 6.1:-66975500 | MS.gene069680:CDS |
| ACTATGTTAGGCTTATCATA+AGG | 0.466884 | 6.1:+66976647 | None:intergenic |
| CTTGTTGATGGCAAGAGAGT+TGG | 0.470062 | 6.1:-66974397 | MS.gene069680:CDS |
| AATGTTAGCGGTCACAAGTA+TGG | 0.472148 | 6.1:-66975448 | MS.gene069680:CDS |
| GTATTGGTTGGGTTGTTTGG+AGG | 0.473665 | 6.1:-66975411 | MS.gene069680:CDS |
| AATGAAGCCAAGTTAAGCCT+TGG | 0.475959 | 6.1:+66977602 | None:intergenic |
| AAAATTTGCCAGGTACTTTG+AGG | 0.476874 | 6.1:-66975758 | MS.gene069680:CDS |
| GCAGTAGGTGTTGGAACTGT+AGG | 0.480901 | 6.1:-66976746 | MS.gene069680:CDS |
| CAAGAGAGTTGGAGCATGCT+AGG | 0.485182 | 6.1:-66974386 | None:intergenic |
| CAAACAACCCAACCAATACC+AGG | 0.491052 | 6.1:+66975415 | None:intergenic |
| TCCATTGAAAGCTGTTGAAA+TGG | 0.494508 | 6.1:-66975689 | MS.gene069680:CDS |
| ATTTATACGGCTAGGCTTCG+AGG | 0.499173 | 6.1:-66975033 | MS.gene069680:intron |
| AAAATTGTCTCCAAGGACAT+AGG | 0.500052 | 6.1:-66974763 | MS.gene069680:CDS |
| ATGGGATTTCCGTTTGCCGT+TGG | 0.504123 | 6.1:-66975482 | MS.gene069680:CDS |
| ACCAGCCAGCATTATTGCCT+CGG | 0.506228 | 6.1:+66976718 | None:intergenic |
| AAGGTTTAAAATTGTCTCCA+AGG | 0.518110 | 6.1:-66974770 | MS.gene069680:CDS |
| GCTACTGTCTTTCAGAGAGA+AGG | 0.525070 | 6.1:+66974726 | None:intergenic |
| AAGTGGCACACCTATGTCCT+TGG | 0.530991 | 6.1:+66974753 | None:intergenic |
| GTCATCCGAGGCAATAATGC+TGG | 0.534312 | 6.1:-66976723 | MS.gene069680:CDS |
| TGAGTGTGATAAGCTTATCA+TGG | 0.535116 | 6.1:-66977558 | MS.gene069680:CDS |
| AGAAGATCAGGGTAGAGAAA+CGG | 0.536404 | 6.1:+66975505 | None:intergenic |
| GAGGAAACTGCAGTAGGTGT+TGG | 0.536508 | 6.1:-66976755 | MS.gene069680:CDS |
| TGCGTCTGCTGGCATTGTGT+AGG | 0.543361 | 6.1:+66974645 | None:intergenic |
| CAGTAGGTGTTGGAACTGTA+GGG | 0.543728 | 6.1:-66976745 | MS.gene069680:CDS |
| AAATGTGATGGAAAATTGCT+TGG | 0.550366 | 6.1:-66974833 | MS.gene069680:CDS |
| ACTAAGAAGAACAAGGAGAC+AGG | 0.550901 | 6.1:-66975577 | MS.gene069680:CDS |
| ACCTGAAGCTCAGTAGTGAC+AGG | 0.552304 | 6.1:+66977497 | None:intergenic |
| TTCAAAAGATGCTCATGTTG+CGG | 0.558105 | 6.1:-66974500 | MS.gene069680:CDS |
| TCCGAGGCAATAATGCTGGC+TGG | 0.559128 | 6.1:-66976719 | MS.gene069680:CDS |
| CACAGAGGATTACTATGTGA+TGG | 0.560082 | 6.1:-66975713 | MS.gene069680:CDS |
| TAGCTCAACCTCAAAGTACC+TGG | 0.560216 | 6.1:+66975750 | None:intergenic |
| AGAAGAACAAGGAGACAGGA+TGG | 0.561254 | 6.1:-66975573 | MS.gene069680:CDS |
| GTGAAAAGTATCAATGTTAG+CGG | 0.565895 | 6.1:-66975460 | MS.gene069680:CDS |
| TTCACATTGAATTTCTCCAA+AGG | 0.571801 | 6.1:-66975322 | MS.gene069680:intron |
| CAATGCTCCTATTGGTGCAG+AGG | 0.575155 | 6.1:-66976774 | MS.gene069680:CDS |
| TCTGCTGGCATTGTGTAGGC+CGG | 0.579437 | 6.1:+66974649 | None:intergenic |
| CAAAATGGCTGCAACACAGA+TGG | 0.582491 | 6.1:+66975654 | None:intergenic |
| GAAGAACAAGGAGACAGGAT+GGG | 0.586417 | 6.1:-66975572 | MS.gene069680:CDS |
| AGTTACTGGAGCTAATGTGC+AGG | 0.605359 | 6.1:-66976627 | MS.gene069680:intron |
| ATGATAAGCTTATCACACTC+AGG | 0.609818 | 6.1:+66977560 | None:intergenic |
| TCAACTGTCACACATCCAGA+TGG | 0.610258 | 6.1:-66977865 | MS.gene069680:CDS |
| AAGGAATTGAGAAAACAGGA+AGG | 0.618569 | 6.1:-66974789 | MS.gene069680:CDS |
| AAGTATGGTCTTGTTTACCC+TGG | 0.620033 | 6.1:-66975433 | MS.gene069680:CDS |
| TACTACCAATTTATACGGCT+AGG | 0.622133 | 6.1:-66975041 | MS.gene069680:CDS |
| TTCAGAGAGAAGGCAACAAG+TGG | 0.622295 | 6.1:+66974736 | None:intergenic |
| GGAAATCCCATAGAAGATCA+GGG | 0.625993 | 6.1:+66975494 | None:intergenic |
| CAGACCATCTGAGAAAATAC+GGG | 0.628218 | 6.1:-66974681 | MS.gene069680:CDS |
| CATGTGGATGCTGCGAGCGG+TGG | 0.629625 | 6.1:-66975538 | MS.gene069680:CDS |
| ATGGGATACTCCAATTCATG+TGG | 0.632127 | 6.1:-66975554 | MS.gene069680:CDS |
| CCTCCGAGTGGTGATTAGGG+AGG | 0.650942 | 6.1:-66974608 | MS.gene069680:CDS |
| GGTGCAGAGGAAACTGCAGT+AGG | 0.659345 | 6.1:-66976761 | MS.gene069680:CDS |
| ACCATCTGAGAAAATACGGG+TGG | 0.660633 | 6.1:-66974678 | MS.gene069680:CDS |
| AATCCTCCCTAATCACCACT+CGG | 0.661532 | 6.1:+66974605 | None:intergenic |
| GCTTCTTACTAAGAAGAACA+AGG | 0.681561 | 6.1:-66975584 | MS.gene069680:CDS |
| CAGACTAAGAGAAAATCAGA+AGG | 0.687264 | 6.1:-66976674 | MS.gene069680:CDS |
| GTGCTATTATATTCACACAC+CGG | 0.687463 | 6.1:+66976804 | None:intergenic |
| TGATGTTAGATGGAAAACCA+AGG | 0.691803 | 6.1:-66977619 | MS.gene069680:CDS |
| ATTCATGTGGATGCTGCGAG+CGG | 0.696037 | 6.1:-66975541 | MS.gene069680:CDS |
| TGGAACTGTAGGGTCATCCG+AGG | 0.696275 | 6.1:-66976735 | MS.gene069680:CDS |
| AAACAACCCAACCAATACCA+GGG | 0.700278 | 6.1:+66975416 | None:intergenic |
| ACACATCGCTGTCCTCCGAG+TGG | 0.704085 | 6.1:-66974620 | MS.gene069680:CDS |
| CCTCCCTAATCACCACTCGG+AGG | 0.723923 | 6.1:+66974608 | None:intergenic |
| TATCGCGAGTGAGACAAGCG+AGG | 0.724808 | 6.1:-66974476 | MS.gene069680:CDS |
| AAAGGAAGTGAAACTCACAG+AGG | 0.773932 | 6.1:-66975728 | MS.gene069680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTTTTTATAATAATGT+CGG | - | chr6.1:66977336-66977355 | MS.gene069680:intron | 15.0% |
| !!! | TTATGAGTATATTTCTTTTT+AGG | + | chr6.1:66977127-66977146 | None:intergenic | 15.0% |
| !! | AATTATTATTGCACAGTAAA+AGG | - | chr6.1:66975069-66975088 | MS.gene069680:intron | 20.0% |
| !! | ATTATTATTGCACAGTAAAA+GGG | - | chr6.1:66975070-66975089 | MS.gene069680:intron | 20.0% |
| !! | CAATTCAATTCTTAAGTATA+TGG | - | chr6.1:66977047-66977066 | MS.gene069680:intron | 20.0% |
| !! | CTGTTACAATTTAAATATCT+TGG | - | chr6.1:66975345-66975364 | MS.gene069680:CDS | 20.0% |
| !! | TAACAAATGTTGAAAATATG+AGG | - | chr6.1:66976059-66976078 | MS.gene069680:intron | 20.0% |
| !! | TCAACTAAATATATTACCTT+TGG | + | chr6.1:66976961-66976980 | None:intergenic | 20.0% |
| !! | TCATAAATCATTGTAATGTT+TGG | - | chr6.1:66977141-66977160 | MS.gene069680:intron | 20.0% |
| !!! | AGTGTTTTTTTAAGGAAAAA+AGG | + | chr6.1:66974493-66974512 | None:intergenic | 20.0% |
| !!! | ATATGTTTATGTGTTGATAT+AGG | - | chr6.1:66974561-66974580 | MS.gene069680:CDS | 20.0% |
| !!! | GGGAAAATATCATTTTTAAT+TGG | - | chr6.1:66975215-66975234 | MS.gene069680:intron | 20.0% |
| !!! | TTGATCAAGATTTTGAATTA+TGG | - | chr6.1:66974812-66974831 | MS.gene069680:CDS | 20.0% |
| !!! | TTGTAAGTATCAAATTTTGA+GGG | + | chr6.1:66975248-66975267 | None:intergenic | 20.0% |
| !!! | TTTTTTAGATCTTTTGTGTT+TGG | - | chr6.1:66975272-66975291 | MS.gene069680:intron | 20.0% |
| ! | AAAGAAATACAAAGCAACAT+TGG | + | chr6.1:66977174-66977193 | None:intergenic | 25.0% |
| ! | AAGAAATACAAAGCAACATT+GGG | + | chr6.1:66977173-66977192 | None:intergenic | 25.0% |
| ! | CAATGTATGACAAAATTCAA+AGG | + | chr6.1:66976990-66977009 | None:intergenic | 25.0% |
| ! | CAGATAAATAAGTACACTTA+AGG | - | chr6.1:66975026-66975045 | MS.gene069680:intron | 25.0% |
| ! | CTCAATACTACCAATTTATA+CGG | - | chr6.1:66977218-66977237 | MS.gene069680:intron | 25.0% |
| ! | CTTAAGTGTACTTATTTATC+TGG | + | chr6.1:66975028-66975047 | None:intergenic | 25.0% |
| ! | GATAAAACATATTGTTCGTT+CGG | - | chr6.1:66975852-66975871 | MS.gene069680:intron | 25.0% |
| ! | GTATTATGTAATATAGTAGC+AGG | - | chr6.1:66975923-66975942 | MS.gene069680:intron | 25.0% |
| ! | TAACAAGAACTATGTTGATA+TGG | - | chr6.1:66974736-66974755 | MS.gene069680:CDS | 25.0% |
| ! | TATATGTCAAAATGAAGATG+AGG | + | chr6.1:66976041-66976060 | None:intergenic | 25.0% |
| ! | TATATTACATAATACCAGAG+AGG | + | chr6.1:66975918-66975937 | None:intergenic | 25.0% |
| ! | TTTCTCGACTAATGAAAATA+AGG | - | chr6.1:66977299-66977318 | MS.gene069680:intron | 25.0% |
| !! | ATTTTGTATTCTACCATACA+AGG | + | chr6.1:66976152-66976171 | None:intergenic | 25.0% |
| !! | CTTTGAATTTTGTCATACAT+TGG | - | chr6.1:66976988-66977007 | MS.gene069680:intron | 25.0% |
| !! | GTTGTAAGTATCAAATTTTG+AGG | + | chr6.1:66975249-66975268 | None:intergenic | 25.0% |
| !! | GTTTTTCACATCAATTATCT+TGG | - | chr6.1:66976903-66976922 | MS.gene069680:intron | 25.0% |
| !! | TACATCTAAAATCATGTTGA+GGG | + | chr6.1:66975784-66975803 | None:intergenic | 25.0% |
| !! | TCATGACTTGTAACTTATAT+TGG | - | chr6.1:66976341-66976360 | MS.gene069680:intron | 25.0% |
| !! | TCTTTTGAATTGATTGAACT+TGG | + | chr6.1:66977753-66977772 | None:intergenic | 25.0% |
| !!! | AAGTTGCTTTTTTGAAGAAA+GGG | - | chr6.1:66975195-66975214 | MS.gene069680:intron | 25.0% |
| !!! | AGCACAAAATTGCATTTTTT+TGG | + | chr6.1:66975813-66975832 | None:intergenic | 25.0% |
| !!! | GATCAAGACTTTTAAAGAAA+AGG | + | chr6.1:66974983-66975002 | None:intergenic | 25.0% |
| !!! | TGTTATTTTTCTTGCTCTAA+GGG | - | chr6.1:66977402-66977421 | MS.gene069680:intron | 25.0% |
| AAACTGTTTGAGAGAACTTA+CGG | - | chr6.1:66976279-66976298 | MS.gene069680:intron | 30.0% | |
| ACTATGTTAGGCTTATCATA+AGG | + | chr6.1:66975620-66975639 | None:intergenic | 30.0% | |
| AGAAAAAGTTGTGAATCTCT+TGG | - | chr6.1:66977719-66977738 | MS.gene069680:intron | 30.0% | |
| ATGTGAAAAACAAGATCATC+CGG | + | chr6.1:66976894-66976913 | None:intergenic | 30.0% | |
| CTTAGAGCAAGAAAAATAAC+AGG | + | chr6.1:66977403-66977422 | None:intergenic | 30.0% | |
| GAGAAATTCAATGTGAAAGT+TGG | + | chr6.1:66976939-66976958 | None:intergenic | 30.0% | |
| TTCACATTGAATTTCTCCAA+AGG | - | chr6.1:66976942-66976961 | MS.gene069680:intron | 30.0% | |
| TTTGTTCAATTATGCAGAAC+CGG | - | chr6.1:66975441-66975460 | MS.gene069680:CDS | 30.0% | |
| ! | AAATGTGATGGAAAATTGCT+TGG | - | chr6.1:66977431-66977450 | MS.gene069680:intron | 30.0% |
| ! | AACACAAAAATTCTGAAGGA+AGG | - | chr6.1:66977456-66977475 | MS.gene069680:intron | 30.0% |
| ! | AAGGTTTAAAATTGTCTCCA+AGG | - | chr6.1:66977494-66977513 | MS.gene069680:intron | 30.0% |
| ! | ACATTGATACTTTTCACCAA+CGG | + | chr6.1:66976801-66976820 | None:intergenic | 30.0% |
| ! | ATGTAGCTTTTGCAAAATCA+GGG | - | chr6.1:66974938-66974957 | MS.gene069680:intron | 30.0% |
| ! | ATTTTGCAAAAGCTACATCA+AGG | + | chr6.1:66974936-66974955 | None:intergenic | 30.0% |
| ! | GTACATCTAAAATCATGTTG+AGG | + | chr6.1:66975785-66975804 | None:intergenic | 30.0% |
| ! | TCTTTTGGTATAGAATTCTC+TGG | + | chr6.1:66974596-66974615 | None:intergenic | 30.0% |
| ! | TGCTTTGTATTTCTTTTGAC+AGG | - | chr6.1:66977178-66977197 | MS.gene069680:intron | 30.0% |
| ! | TTCATTTGTTACTACTTGGA+TGG | - | chr6.1:66974679-66974698 | MS.gene069680:CDS | 30.0% |
| ! | TTTAGATCTTTTGTGTTTGG+TGG | - | chr6.1:66975275-66975294 | MS.gene069680:intron | 30.0% |
| !! | AATGATGAGTTGATGTTAGA+TGG | - | chr6.1:66974635-66974654 | MS.gene069680:CDS | 30.0% |
| !! | GTAGTTCTGTATTTTCTTAG+AGG | - | chr6.1:66975745-66975764 | MS.gene069680:CDS | 30.0% |
| !! | GTGAAAAGTATCAATGTTAG+CGG | - | chr6.1:66976804-66976823 | MS.gene069680:CDS | 30.0% |
| !! | TCAGTACTTTCAAGTTTCAA+TGG | + | chr6.1:66975403-66975422 | None:intergenic | 30.0% |
| !! | TTGATCTTTGAAGCTTTGTT+TGG | - | chr6.1:66974997-66975016 | MS.gene069680:intron | 30.0% |
| !!! | ACACACACTTAGTTTTTTGT+TGG | - | chr6.1:66974515-66974534 | MS.gene069680:CDS | 30.0% |
| !!! | CAAGTTGCTTTTTTGAAGAA+AGG | - | chr6.1:66975194-66975213 | MS.gene069680:intron | 30.0% |
| !!! | CTGTTATTTTTCTTGCTCTA+AGG | - | chr6.1:66977401-66977420 | MS.gene069680:intron | 30.0% |
| !!! | GTGTGTGAAGTGTTTTTTTA+AGG | + | chr6.1:66974501-66974520 | None:intergenic | 30.0% |
| !!! | GTTTAGCTTTTAAAAGGAAG+TGG | - | chr6.1:66975567-66975586 | MS.gene069680:CDS | 30.0% |
| AAAATTGTCTCCAAGGACAT+AGG | - | chr6.1:66977501-66977520 | MS.gene069680:CDS | 35.0% | |
| AAAATTTGCCAGGTACTTTG+AGG | - | chr6.1:66976506-66976525 | MS.gene069680:intron | 35.0% | |
| AAGCTGAGATTCTTAGGTAT+TGG | - | chr6.1:66977838-66977857 | MS.gene069680:CDS | 35.0% | |
| AAGGAAGGAATTGAGAAAAC+AGG | - | chr6.1:66977471-66977490 | MS.gene069680:intron | 35.0% | |
| AAGGAATTGAGAAAACAGGA+AGG | - | chr6.1:66977475-66977494 | MS.gene069680:intron | 35.0% | |
| AATATGCTACACAGGTTTGT+TGG | - | chr6.1:66976481-66976500 | MS.gene069680:intron | 35.0% | |
| ACCATTTCAACAGCTTTCAA+TGG | + | chr6.1:66976579-66976598 | None:intergenic | 35.0% | |
| AGCAGAGAATGATAGTTTCA+GGG | + | chr6.1:66975174-66975193 | None:intergenic | 35.0% | |
| ATGATAAGCTTATCACACTC+AGG | + | chr6.1:66974707-66974726 | None:intergenic | 35.0% | |
| CAGACTAAGAGAAAATCAGA+AGG | - | chr6.1:66975590-66975609 | MS.gene069680:CDS | 35.0% | |
| CAGATAGGATCTTGATATTG+CGG | - | chr6.1:66974844-66974863 | MS.gene069680:CDS | 35.0% | |
| CATCTATTCAATGCTCCTAT+TGG | - | chr6.1:66975482-66975501 | MS.gene069680:CDS | 35.0% | |
| GATAAGCCTAACATAGTTAC+TGG | - | chr6.1:66975623-66975642 | MS.gene069680:CDS | 35.0% | |
| GATGAGGCAATAAATTTAGC+AGG | + | chr6.1:66976025-66976044 | None:intergenic | 35.0% | |
| GCTGTTTAAATATGCTACAC+AGG | - | chr6.1:66976473-66976492 | MS.gene069680:intron | 35.0% | |
| GCTTCTTACTAAGAAGAACA+AGG | - | chr6.1:66976680-66976699 | MS.gene069680:CDS | 35.0% | |
| GGAAAAAAGGACACTTACTT+AGG | + | chr6.1:66974480-66974499 | None:intergenic | 35.0% | |
| TAAGGGCTACAAAAATGTGA+TGG | - | chr6.1:66977419-66977438 | MS.gene069680:intron | 35.0% | |
| TACTACCAATTTATACGGCT+AGG | - | chr6.1:66977223-66977242 | MS.gene069680:intron | 35.0% | |
| TCCATTGAAAGCTGTTGAAA+TGG | - | chr6.1:66976575-66976594 | MS.gene069680:intron | 35.0% | |
| TGAGTGTGATAAGCTTATCA+TGG | - | chr6.1:66974706-66974725 | MS.gene069680:CDS | 35.0% | |
| TGATGTTAGATGGAAAACCA+AGG | - | chr6.1:66974645-66974664 | MS.gene069680:CDS | 35.0% | |
| TGTGTGGTTAAGAAATGTGT+TGG | - | chr6.1:66975884-66975903 | MS.gene069680:intron | 35.0% | |
| TTAGCTCCAGTAACTATGTT+AGG | + | chr6.1:66975632-66975651 | None:intergenic | 35.0% | |
| TTCAAAAGATGCTCATGTTG+CGG | - | chr6.1:66977764-66977783 | MS.gene069680:intron | 35.0% | |
| TTTGTTGGGAAAAATTTGCC+AGG | - | chr6.1:66976496-66976515 | MS.gene069680:intron | 35.0% | |
| ! | ATATGCTACACAGGTTTGTT+GGG | - | chr6.1:66976482-66976501 | MS.gene069680:intron | 35.0% |
| ! | ATCTAAAATCATGTTGAGGG+TGG | + | chr6.1:66975781-66975800 | None:intergenic | 35.0% |
| ! | ATCTGATATGCTGCATCTTT+TGG | + | chr6.1:66974611-66974630 | None:intergenic | 35.0% |
| ! | GATGTAGCTTTTGCAAAATC+AGG | - | chr6.1:66974937-66974956 | MS.gene069680:intron | 35.0% |
| ! | GCTGTAAAGAAGTACATTTC+TGG | - | chr6.1:66975830-66975849 | MS.gene069680:intron | 35.0% |
| ! | GTGCTATTATATTCACACAC+CGG | + | chr6.1:66975463-66975482 | None:intergenic | 35.0% |
| ! | GTTCTGTATTTTCTTAGAGG+CGG | - | chr6.1:66975748-66975767 | MS.gene069680:CDS | 35.0% |
| ! | TCTAAAATCATGTTGAGGGT+GGG | + | chr6.1:66975780-66975799 | None:intergenic | 35.0% |
| ! | TGGCTTCATTTGTTACTACT+TGG | - | chr6.1:66974675-66974694 | MS.gene069680:CDS | 35.0% |
| ! | TTGGTGGTTGGATGAAAATT+TGG | - | chr6.1:66975291-66975310 | MS.gene069680:intron | 35.0% |
| !! | TATTGGAAGAAGCTTGTTGA+TGG | - | chr6.1:66977855-66977874 | MS.gene069680:CDS | 35.0% |
| !!! | TGGCTGGTTTAGCTTTTAAA+AGG | - | chr6.1:66975561-66975580 | MS.gene069680:CDS | 35.0% |
| AAACAACCCAACCAATACCA+GGG | + | chr6.1:66976851-66976870 | None:intergenic | 40.0% | |
| AAAGGAAGTGAAACTCACAG+AGG | - | chr6.1:66976536-66976555 | MS.gene069680:intron | 40.0% | |
| AATGAAGCCAAGTTAAGCCT+TGG | + | chr6.1:66974665-66974684 | None:intergenic | 40.0% | |
| AATGTTAGCGGTCACAAGTA+TGG | - | chr6.1:66976816-66976835 | MS.gene069680:intron | 40.0% | |
| ACTAAGAAGAACAAGGAGAC+AGG | - | chr6.1:66976687-66976706 | MS.gene069680:CDS | 40.0% | |
| AGAAGATCAGGGTAGAGAAA+CGG | + | chr6.1:66976762-66976781 | None:intergenic | 40.0% | |
| AGACTCAAGCTGAGATTCTT+AGG | - | chr6.1:66977832-66977851 | MS.gene069680:CDS | 40.0% | |
| AGAGGAAACAAAGCATGAGA+CGG | + | chr6.1:66976087-66976106 | None:intergenic | 40.0% | |
| ATGGGATACTCCAATTCATG+TGG | - | chr6.1:66976710-66976729 | MS.gene069680:CDS | 40.0% | |
| ATGTTTCACAGCGAGTTTGT+TGG | - | chr6.1:66974895-66974914 | MS.gene069680:intron | 40.0% | |
| CACAGAGGATTACTATGTGA+TGG | - | chr6.1:66976551-66976570 | MS.gene069680:intron | 40.0% | |
| CACCCTAAACTAAAGCAGAA+AGG | + | chr6.1:66976213-66976232 | None:intergenic | 40.0% | |
| CAGACCATCTGAGAAAATAC+GGG | - | chr6.1:66977583-66977602 | MS.gene069680:CDS | 40.0% | |
| CTAAAATCATGTTGAGGGTG+GGG | + | chr6.1:66975779-66975798 | None:intergenic | 40.0% | |
| CTCTCAAACAGTTTCACAAG+TGG | + | chr6.1:66976273-66976292 | None:intergenic | 40.0% | |
| GAGCAGAGAATGATAGTTTC+AGG | + | chr6.1:66975175-66975194 | None:intergenic | 40.0% | |
| GAGCTATCATAGAGAGCTTA+TGG | + | chr6.1:66976323-66976342 | None:intergenic | 40.0% | |
| GCAGACCATCTGAGAAAATA+CGG | - | chr6.1:66977582-66977601 | MS.gene069680:CDS | 40.0% | |
| GGAAATCCCATAGAAGATCA+GGG | + | chr6.1:66976773-66976792 | None:intergenic | 40.0% | |
| GGCGAACACAAAAATTCTGA+AGG | - | chr6.1:66977452-66977471 | MS.gene069680:intron | 40.0% | |
| TAAAGAAAAGGCCTGCATCA+GGG | + | chr6.1:66974971-66974990 | None:intergenic | 40.0% | |
| TCTCTACCCTGATCTTCTAT+GGG | - | chr6.1:66976764-66976783 | MS.gene069680:CDS | 40.0% | |
| TGGAAAACCAAGGCTTAACT+TGG | - | chr6.1:66974655-66974674 | MS.gene069680:CDS | 40.0% | |
| TGTTGGAGAAAATTCCTCTC+TGG | - | chr6.1:66975901-66975920 | MS.gene069680:intron | 40.0% | |
| TTAAACAGCGTCAAACATCG+AGG | + | chr6.1:66976462-66976481 | None:intergenic | 40.0% | |
| TTAAAGAAAAGGCCTGCATC+AGG | + | chr6.1:66974972-66974991 | None:intergenic | 40.0% | |
| TTCTCTACCCTGATCTTCTA+TGG | - | chr6.1:66976763-66976782 | MS.gene069680:CDS | 40.0% | |
| ! | ATGTTCTCGTTTTGTCCATC+TGG | + | chr6.1:66974417-66974436 | None:intergenic | 40.0% |
| ! | CGCCTTTCTGCTTTAGTTTA+GGG | - | chr6.1:66976208-66976227 | MS.gene069680:intron | 40.0% |
| ! | TACTTTTCACCAACGGCAAA+CGG | + | chr6.1:66976794-66976813 | None:intergenic | 40.0% |
| !! | AAGTATGGTCTTGTTTACCC+TGG | - | chr6.1:66976831-66976850 | MS.gene069680:intron | 40.0% |
| !! | ATCTGTGTTGCAGCCATTTT+GGG | - | chr6.1:66976612-66976631 | MS.gene069680:intron | 40.0% |
| !! | GATCTTTTGTGTTTGGTGGT+TGG | - | chr6.1:66975279-66975298 | MS.gene069680:intron | 40.0% |
| !! | GTACTTTGAGGTTGAGCTAA+AGG | - | chr6.1:66976518-66976537 | MS.gene069680:intron | 40.0% |
| !! | TGTTTACCCTGGTATTGGTT+GGG | - | chr6.1:66976842-66976861 | MS.gene069680:intron | 40.0% |
| !! | TTGTTTACCCTGGTATTGGT+TGG | - | chr6.1:66976841-66976860 | MS.gene069680:intron | 40.0% |
| AAAATACGGGTGGATCGTTC+CGG | - | chr6.1:66977596-66977615 | MS.gene069680:CDS | 45.0% | |
| AATCCTCCCTAATCACCACT+CGG | + | chr6.1:66977662-66977681 | None:intergenic | 45.0% | |
| ACCATCTGAGAAAATACGGG+TGG | - | chr6.1:66977586-66977605 | MS.gene069680:CDS | 45.0% | |
| AGAAGAACAAGGAGACAGGA+TGG | - | chr6.1:66976691-66976710 | MS.gene069680:CDS | 45.0% | |
| AGGAAACAAAGCATGAGACG+GGG | + | chr6.1:66976085-66976104 | None:intergenic | 45.0% | |
| AGTTACTGGAGCTAATGTGC+AGG | - | chr6.1:66975637-66975656 | MS.gene069680:CDS | 45.0% | |
| ATTTATACGGCTAGGCTTCG+AGG | - | chr6.1:66977231-66977250 | MS.gene069680:intron | 45.0% | |
| CAAAATGGCTGCAACACAGA+TGG | + | chr6.1:66976613-66976632 | None:intergenic | 45.0% | |
| CAAACAACCCAACCAATACC+AGG | + | chr6.1:66976852-66976871 | None:intergenic | 45.0% | |
| CAAACATCGAGGTCTCTGTT+TGG | + | chr6.1:66976451-66976470 | None:intergenic | 45.0% | |
| CGAAGCCTAGCCGTATAAAT+TGG | + | chr6.1:66977231-66977250 | None:intergenic | 45.0% | |
| CGGAAATCCCATAGAAGATC+AGG | + | chr6.1:66976774-66976793 | None:intergenic | 45.0% | |
| CTATGTACGTTGTGGATGAG+TGG | + | chr6.1:66976002-66976021 | None:intergenic | 45.0% | |
| GAAGAACAAGGAGACAGGAT+GGG | - | chr6.1:66976692-66976711 | MS.gene069680:CDS | 45.0% | |
| GAGGAAACAAAGCATGAGAC+GGG | + | chr6.1:66976086-66976105 | None:intergenic | 45.0% | |
| GCTACTGTCTTTCAGAGAGA+AGG | + | chr6.1:66977541-66977560 | None:intergenic | 45.0% | |
| GTCTGACCTTACCTTTGAGT+CGG | + | chr6.1:66975950-66975969 | None:intergenic | 45.0% | |
| TCAACTGTCACACATCCAGA+TGG | - | chr6.1:66974399-66974418 | MS.gene069680:CDS | 45.0% | |
| TCTGACCTTACCTTTGAGTC+GGG | + | chr6.1:66975949-66975968 | None:intergenic | 45.0% | |
| TTAGCAGGCTATGTACGTTG+TGG | + | chr6.1:66976010-66976029 | None:intergenic | 45.0% | |
| TTATGGTTGCGATCGCAGAT+AGG | - | chr6.1:66974829-66974848 | MS.gene069680:CDS | 45.0% | |
| TTCAGAGAGAAGGCAACAAG+TGG | + | chr6.1:66977531-66977550 | None:intergenic | 45.0% | |
| TTCTAGATACGTGCGTGAAC+AGG | - | chr6.1:66974452-66974471 | MS.gene069680:CDS | 45.0% | |
| ! | AGTCAGCGTTGAACCCAAAA+TGG | + | chr6.1:66976628-66976647 | None:intergenic | 45.0% |
| ! | CATCTGTGTTGCAGCCATTT+TGG | - | chr6.1:66976611-66976630 | MS.gene069680:intron | 45.0% |
| ! | GCGCCTTTCTGCTTTAGTTT+AGG | - | chr6.1:66976207-66976226 | MS.gene069680:intron | 45.0% |
| ! | TAGCTCAACCTCAAAGTACC+TGG | + | chr6.1:66976517-66976536 | None:intergenic | 45.0% |
| ! | TCCACCCGTATTTTCTCAGA+TGG | + | chr6.1:66977590-66977609 | None:intergenic | 45.0% |
| !! | CAGTAGGTGTTGGAACTGTA+GGG | - | chr6.1:66975519-66975538 | MS.gene069680:CDS | 45.0% |
| !! | CTCATGCTTTGTTTCCTCTG+AGG | - | chr6.1:66976088-66976107 | MS.gene069680:intron | 45.0% |
| !! | CTGGTATTGGTTGGGTTGTT+TGG | - | chr6.1:66976850-66976869 | MS.gene069680:intron | 45.0% |
| !! | CTTGTTGATGGCAAGAGAGT+TGG | - | chr6.1:66977867-66977886 | MS.gene069680:CDS | 45.0% |
| !! | GGTCTTGTTTACCCTGGTAT+TGG | - | chr6.1:66976837-66976856 | MS.gene069680:intron | 45.0% |
| !! | GTATTGGTTGGGTTGTTTGG+AGG | - | chr6.1:66976853-66976872 | MS.gene069680:intron | 45.0% |
| !!! | ATTTTGGGTTCAACGCTGAC+TGG | - | chr6.1:66976627-66976646 | MS.gene069680:intron | 45.0% |
| AAGTGGCACACCTATGTCCT+TGG | + | chr6.1:66977514-66977533 | None:intergenic | 50.0% | |
| ACCAGCCAGCATTATTGCCT+CGG | + | chr6.1:66975549-66975568 | None:intergenic | 50.0% | |
| ACCTGAAGCTCAGTAGTGAC+AGG | + | chr6.1:66974770-66974789 | None:intergenic | 50.0% | |
| AGGCTGAAGGCCTAAAGCAA+GGG | + | chr6.1:66975976-66975995 | None:intergenic | 50.0% | |
| ATGGGATTTCCGTTTGCCGT+TGG | - | chr6.1:66976782-66976801 | MS.gene069680:CDS | 50.0% | |
| ATTCATGTGGATGCTGCGAG+CGG | - | chr6.1:66976723-66976742 | MS.gene069680:CDS | 50.0% | |
| CAATGCTCCTATTGGTGCAG+AGG | - | chr6.1:66975490-66975509 | MS.gene069680:CDS | 50.0% | |
| CGTTCGGACAGAAACATGTG+TGG | - | chr6.1:66975868-66975887 | MS.gene069680:intron | 50.0% | |
| CTCGCAGCATCCACATGAAT+TGG | + | chr6.1:66976723-66976742 | None:intergenic | 50.0% | |
| GACTGCATGCTCACTTCGAT+AGG | - | chr6.1:66975717-66975736 | MS.gene069680:CDS | 50.0% | |
| GAGGAAACTGCAGTAGGTGT+TGG | - | chr6.1:66975509-66975528 | MS.gene069680:CDS | 50.0% | |
| GCAATGTGAGGCCTAAAGCT+AGG | + | chr6.1:66976119-66976138 | None:intergenic | 50.0% | |
| GCAGTTTCCTCTGCACCAAT+AGG | + | chr6.1:66975500-66975519 | None:intergenic | 50.0% | |
| GGAGGATTTCAGCTGTAGCT+TGG | - | chr6.1:66977674-66977693 | MS.gene069680:CDS | 50.0% | |
| GTCATCCGAGGCAATAATGC+TGG | - | chr6.1:66975541-66975560 | MS.gene069680:CDS | 50.0% | |
| TAGGCTGAAGGCCTAAAGCA+AGG | + | chr6.1:66975977-66975996 | None:intergenic | 50.0% | |
| TCCTGTCACTACTGAGCTTC+AGG | - | chr6.1:66974766-66974785 | MS.gene069680:CDS | 50.0% | |
| TGTCCTCCGAGTGGTGATTA+GGG | - | chr6.1:66977653-66977672 | MS.gene069680:CDS | 50.0% | |
| TTTAGGCCTCACATTGCCTG+CGG | - | chr6.1:66976122-66976141 | MS.gene069680:intron | 50.0% | |
| ! | AACGCTGACTGGAGAGTTTG+AGG | - | chr6.1:66976638-66976657 | MS.gene069680:CDS | 50.0% |
| ! | ACGTTGTGGATGAGTGGACT+AGG | + | chr6.1:66975996-66976015 | None:intergenic | 50.0% |
| !! | GAGGCATAAAGCTGACTTGC+CGG | - | chr6.1:66976872-66976891 | MS.gene069680:intron | 50.0% |
| !! | GCAGTAGGTGTTGGAACTGT+AGG | - | chr6.1:66975518-66975537 | MS.gene069680:CDS | 50.0% |
| AGAAAAGGCCTGCATCAGGG+TGG | + | chr6.1:66974968-66974987 | None:intergenic | 55.0% | |
| CTGTCCTCCGAGTGGTGATT+AGG | - | chr6.1:66977652-66977671 | MS.gene069680:CDS | 55.0% | |
| GGTGCAGAGGAAACTGCAGT+AGG | - | chr6.1:66975503-66975522 | MS.gene069680:CDS | 55.0% | |
| GTCAGACGAGCCCTTGCTTT+AGG | - | chr6.1:66975963-66975982 | MS.gene069680:intron | 55.0% | |
| TAGTAGCAGGCCCGACTCAA+AGG | - | chr6.1:66975936-66975955 | MS.gene069680:intron | 55.0% | |
| TATCGCGAGTGAGACAAGCG+AGG | - | chr6.1:66977788-66977807 | MS.gene069680:intron | 55.0% | |
| TCCGAGGCAATAATGCTGGC+TGG | - | chr6.1:66975545-66975564 | MS.gene069680:CDS | 55.0% | |
| TCTGCTGGCATTGTGTAGGC+CGG | + | chr6.1:66977618-66977637 | None:intergenic | 55.0% | |
| TGCGTCTGCTGGCATTGTGT+AGG | + | chr6.1:66977622-66977641 | None:intergenic | 55.0% | |
| TGGAACTGTAGGGTCATCCG+AGG | - | chr6.1:66975529-66975548 | MS.gene069680:CDS | 55.0% | |
| ! | AAAGCTAGGTGTCGCCTCAG+AGG | + | chr6.1:66976105-66976124 | None:intergenic | 55.0% |
| ! | CTGAGGCGACACCTAGCTTT+AGG | - | chr6.1:66976105-66976124 | MS.gene069680:intron | 55.0% |
| ! | GCGATGTGTTTTGCGTCTGC+TGG | + | chr6.1:66977633-66977652 | None:intergenic | 55.0% |
| !! | GGATGAGTGGACTAGGCTGA+AGG | + | chr6.1:66975989-66976008 | None:intergenic | 55.0% |
| ACACATCGCTGTCCTCCGAG+TGG | - | chr6.1:66977644-66977663 | MS.gene069680:CDS | 60.0% | |
| CCTCCCTAATCACCACTCGG+AGG | + | chr6.1:66977659-66977678 | None:intergenic | 60.0% | |
| CCTCCGAGTGGTGATTAGGG+AGG | - | chr6.1:66977656-66977675 | MS.gene069680:CDS | 60.0% | |
| GCAGGCCCGACTCAAAGGTA+AGG | - | chr6.1:66975941-66975960 | MS.gene069680:intron | 60.0% | |
| TACCATACAAGGCCGACCGC+AGG | + | chr6.1:66976141-66976160 | None:intergenic | 60.0% | |
| AGGGTGAGCCACCCTGATGC+AGG | - | chr6.1:66974957-66974976 | MS.gene069680:intron | 65.0% | |
| CATGTGGATGCTGCGAGCGG+TGG | - | chr6.1:66976726-66976745 | MS.gene069680:CDS | 65.0% | |
| GGCCTCACATTGCCTGCGGT+CGG | - | chr6.1:66976126-66976145 | MS.gene069680:intron | 65.0% | |
| ! | TGCCTGCGGTCGGCCTTGTA+TGG | - | chr6.1:66976136-66976155 | MS.gene069680:intron | 65.0% |
| GGCCGACCGCAGGCAATGTG+AGG | + | chr6.1:66976131-66976150 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 66974387 | 66977899 | 66974387 | ID=MS.gene069680 |
| chr6.1 | mRNA | 66974387 | 66977899 | 66974387 | ID=MS.gene069680.t1;Parent=MS.gene069680 |
| chr6.1 | exon | 66977805 | 66977899 | 66977805 | ID=MS.gene069680.t1.exon1;Parent=MS.gene069680.t1 |
| chr6.1 | CDS | 66977805 | 66977899 | 66977805 | ID=cds.MS.gene069680.t1;Parent=MS.gene069680.t1 |
| chr6.1 | exon | 66977499 | 66977703 | 66977499 | ID=MS.gene069680.t1.exon2;Parent=MS.gene069680.t1 |
| chr6.1 | CDS | 66977499 | 66977703 | 66977499 | ID=cds.MS.gene069680.t1;Parent=MS.gene069680.t1 |
| chr6.1 | exon | 66976628 | 66976828 | 66976628 | ID=MS.gene069680.t1.exon3;Parent=MS.gene069680.t1 |
| chr6.1 | CDS | 66976628 | 66976828 | 66976628 | ID=cds.MS.gene069680.t1;Parent=MS.gene069680.t1 |
| chr6.1 | exon | 66975323 | 66975791 | 66975323 | ID=MS.gene069680.t1.exon4;Parent=MS.gene069680.t1 |
| chr6.1 | CDS | 66975323 | 66975791 | 66975323 | ID=cds.MS.gene069680.t1;Parent=MS.gene069680.t1 |
| chr6.1 | exon | 66975034 | 66975086 | 66975034 | ID=MS.gene069680.t1.exon5;Parent=MS.gene069680.t1 |
| chr6.1 | CDS | 66975034 | 66975086 | 66975034 | ID=cds.MS.gene069680.t1;Parent=MS.gene069680.t1 |
| chr6.1 | exon | 66974387 | 66974863 | 66974387 | ID=MS.gene069680.t1.exon6;Parent=MS.gene069680.t1 |
| chr6.1 | CDS | 66974387 | 66974863 | 66974387 | ID=cds.MS.gene069680.t1;Parent=MS.gene069680.t1 |
| Gene Sequence |
| Protein sequence |
