Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58676.t1 | XP_013463123.1 | 97.1 | 451 | 13 | 0 | 4 | 454 | 28 | 478 | 1.30E-248 | 868.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58676.t1 | I1L153 | 89.6 | 451 | 47 | 0 | 4 | 454 | 32 | 482 | 2.2e-233 | 809.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58676.t1 | A0A072VGX4 | 97.1 | 451 | 13 | 0 | 4 | 454 | 28 | 478 | 9.1e-249 | 868.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene58676 | 0.87209 | 4.15E-67 | -1.69E-46 |
| MS.gene049151 | MS.gene58676 | 0.839584 | 1.45E-57 | -1.69E-46 |
| MS.gene049153 | MS.gene58676 | 0.870912 | 1.02E-66 | -1.69E-46 |
| MS.gene049260 | MS.gene58676 | 0.820291 | 7.41E-53 | -1.69E-46 |
| MS.gene049356 | MS.gene58676 | 0.810097 | 1.37E-50 | -1.69E-46 |
| MS.gene049443 | MS.gene58676 | 0.807961 | 3.91E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene58676 | 0.824112 | 9.63E-54 | -1.69E-46 |
| MS.gene049910 | MS.gene58676 | 0.82823 | 1.01E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene58676 | 0.874082 | 8.92E-68 | -1.69E-46 |
| MS.gene050226 | MS.gene58676 | 0.810523 | 1.11E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene58676 | 0.804675 | 1.93E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene58676 | 0.808293 | 3.33E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene58676 | 0.803848 | 2.87E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene58676 | -0.81211 | 5.00E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene58676 | 0.800263 | 1.56E-48 | -1.69E-46 |
| MS.gene050762 | MS.gene58676 | 0.816007 | 6.90E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene58676 | 0.81557 | 8.64E-52 | -1.69E-46 |
| MS.gene050900 | MS.gene58676 | 0.803331 | 3.67E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene58676 | 0.807763 | 4.31E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene58676 | 0.860084 | 2.64E-63 | -1.69E-46 |
| MS.gene051983 | MS.gene58676 | 0.82761 | 1.42E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene58676 | 0.831477 | 1.63E-55 | -1.69E-46 |
| MS.gene052178 | MS.gene58676 | 0.814184 | 1.75E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene58676 | 0.831233 | 1.88E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene58676 | 0.801259 | 9.80E-49 | -1.69E-46 |
| MS.gene052255 | MS.gene58676 | 0.80003 | 1.75E-48 | -1.69E-46 |
| MS.gene052340 | MS.gene58676 | 0.826396 | 2.78E-54 | -1.69E-46 |
| MS.gene052426 | MS.gene58676 | 0.814481 | 1.51E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene58676 | 0.868675 | 5.47E-66 | -1.69E-46 |
| MS.gene053494 | MS.gene58676 | 0.858189 | 9.77E-63 | -1.69E-46 |
| MS.gene053555 | MS.gene58676 | 0.822586 | 2.19E-53 | -1.69E-46 |
| MS.gene053559 | MS.gene58676 | 0.808382 | 3.18E-50 | -1.69E-46 |
| MS.gene053577 | MS.gene58676 | 0.828724 | 7.67E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene58676 | 0.834213 | 3.41E-56 | -1.69E-46 |
| MS.gene054010 | MS.gene58676 | 0.823917 | 1.07E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene58676 | 0.823829 | 1.12E-53 | -1.69E-46 |
| MS.gene054012 | MS.gene58676 | 0.819243 | 1.29E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene58676 | 0.811769 | 5.93E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene58676 | 0.834769 | 2.47E-56 | -1.69E-46 |
| MS.gene054349 | MS.gene58676 | 0.825225 | 5.26E-54 | -1.69E-46 |
| MS.gene054379 | MS.gene58676 | 0.818671 | 1.74E-52 | -1.69E-46 |
| MS.gene054542 | MS.gene58676 | 0.817924 | 2.56E-52 | -1.69E-46 |
| MS.gene054556 | MS.gene58676 | 0.804435 | 2.16E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene58676 | 0.824765 | 6.76E-54 | -1.69E-46 |
| MS.gene05510 | MS.gene58676 | 0.824586 | 7.45E-54 | -1.69E-46 |
| MS.gene055358 | MS.gene58676 | 0.800677 | 1.29E-48 | -1.69E-46 |
| MS.gene055604 | MS.gene58676 | 0.841799 | 3.82E-58 | -1.69E-46 |
| MS.gene055701 | MS.gene58676 | 0.839776 | 1.29E-57 | -1.69E-46 |
| MS.gene056447 | MS.gene58676 | 0.840245 | 9.76E-58 | -1.69E-46 |
| MS.gene056723 | MS.gene58676 | 0.833555 | 4.99E-56 | -1.69E-46 |
| MS.gene056902 | MS.gene58676 | 0.827644 | 1.40E-54 | -1.69E-46 |
| MS.gene056979 | MS.gene58676 | 0.823713 | 1.19E-53 | -1.69E-46 |
| MS.gene057396 | MS.gene58676 | 0.802096 | 6.60E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene58676 | 0.830664 | 2.59E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene58676 | 0.821737 | 3.44E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene58676 | 0.82517 | 5.42E-54 | -1.69E-46 |
| MS.gene057469 | MS.gene58676 | 0.843282 | 1.54E-58 | -1.69E-46 |
| MS.gene057750 | MS.gene58676 | 0.804262 | 2.35E-49 | -1.69E-46 |
| MS.gene057929 | MS.gene58676 | 0.820025 | 8.53E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene58676 | 0.801453 | 8.94E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene58676 | 0.818906 | 1.53E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene58676 | 0.819331 | 1.23E-52 | -1.69E-46 |
| MS.gene058435 | MS.gene58676 | 0.810738 | 9.93E-51 | -1.69E-46 |
| MS.gene058949 | MS.gene58676 | 0.829742 | 4.34E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene58676 | 0.806223 | 9.13E-50 | -1.69E-46 |
| MS.gene059161 | MS.gene58676 | 0.834713 | 2.56E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene58676 | 0.816323 | 5.87E-52 | -1.69E-46 |
| MS.gene059294 | MS.gene58676 | 0.814781 | 1.29E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene58676 | 0.804247 | 2.37E-49 | -1.69E-46 |
| MS.gene059462 | MS.gene58676 | 0.801057 | 1.08E-48 | -1.69E-46 |
| MS.gene059609 | MS.gene58676 | 0.823453 | 1.37E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene58676 | 0.831065 | 2.06E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene58676 | 0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene059876 | MS.gene58676 | 0.813253 | 2.81E-51 | -1.69E-46 |
| MS.gene060495 | MS.gene58676 | 0.870989 | 9.61E-67 | -1.69E-46 |
| MS.gene060683 | MS.gene58676 | 0.819607 | 1.06E-52 | -1.69E-46 |
| MS.gene060685 | MS.gene58676 | 0.809647 | 1.71E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene58676 | 0.823773 | 1.16E-53 | -1.69E-46 |
| MS.gene060803 | MS.gene58676 | 0.806216 | 9.16E-50 | -1.69E-46 |
| MS.gene060943 | MS.gene58676 | 0.820872 | 5.45E-53 | -1.69E-46 |
| MS.gene061002 | MS.gene58676 | 0.816824 | 4.53E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene58676 | 0.828383 | 9.27E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52995 | MS.gene58676 | PPI |
| MS.gene066011 | MS.gene58676 | PPI |
| MS.gene71448 | MS.gene58676 | PPI |
| MS.gene004811 | MS.gene58676 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58676.t1 | MTR_2g035405 | 97.118 | 451 | 13 | 0 | 4 | 454 | 28 | 478 | 0.0 | 901 |
| MS.gene58676.t1 | MTR_2g035405 | 97.959 | 392 | 8 | 0 | 63 | 454 | 1 | 392 | 0.0 | 794 |
| MS.gene58676.t1 | MTR_2g035405 | 96.541 | 318 | 11 | 0 | 4 | 321 | 28 | 345 | 0.0 | 630 |
| MS.gene58676.t1 | MTR_1g075320 | 30.806 | 422 | 262 | 8 | 32 | 450 | 67 | 461 | 2.76e-48 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58676.t1 | AT4G20070 | 73.636 | 440 | 116 | 0 | 14 | 453 | 84 | 523 | 0.0 | 679 |
| MS.gene58676.t1 | AT4G20070 | 72.876 | 306 | 83 | 0 | 14 | 319 | 84 | 389 | 1.27e-164 | 471 |
| MS.gene58676.t1 | AT5G43600 | 32.870 | 432 | 242 | 13 | 32 | 450 | 72 | 468 | 2.61e-47 | 170 |
Find 105 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAGCAACCTTATCATTTC+TGG | 0.089860 | 2.3:+53536089 | MS.gene58676:CDS |
| ACATAACCCCAAACAGATTT+TGG | 0.153224 | 2.3:-53534295 | None:intergenic |
| TGCAAATGCAGAAGCTTTAT+TGG | 0.176766 | 2.3:+53533451 | MS.gene58676:CDS |
| CGATAAATCTTATTCGAAAA+TGG | 0.276645 | 2.3:+53533286 | MS.gene58676:CDS |
| TTTCCTTGATACCTCTTATC+AGG | 0.279914 | 2.3:-53534129 | None:intergenic |
| TTCCCACTTGGTGTCGTTAA+AGG | 0.289921 | 2.3:+53534464 | MS.gene58676:CDS |
| AGATTTCAAACTACTTTCTT+AGG | 0.292944 | 2.3:+53534060 | MS.gene58676:CDS |
| GTATGATCCAAAATCTGTTT+GGG | 0.312638 | 2.3:+53534288 | MS.gene58676:CDS |
| TTTGTGTAGGTCACGGTTAA+AGG | 0.312855 | 2.3:+53534599 | MS.gene58676:intron |
| TTCAGCTGTGAACTTAGTTC+TGG | 0.333589 | 2.3:-53535786 | None:intergenic |
| TGCTGAACAAATTGTACTTA+TGG | 0.340654 | 2.3:+53534682 | MS.gene58676:CDS |
| AGTATGATCCAAAATCTGTT+TGG | 0.358696 | 2.3:+53534287 | MS.gene58676:CDS |
| GTTGATGCTGGTAAATTTGA+TGG | 0.363766 | 2.3:+53533627 | MS.gene58676:CDS |
| ACCATACCTTGTGTTCAATA+AGG | 0.385103 | 2.3:-53535069 | None:intergenic |
| TTTCAGTTGGGTGGACCAAA+TGG | 0.392422 | 2.3:+53533397 | MS.gene58676:intron |
| AATTTGTCGCTTGCCTGGCC+TGG | 0.401249 | 2.3:-53534842 | None:intergenic |
| CTTGACACACTGACCTCAAC+AGG | 0.410246 | 2.3:-53533726 | None:intergenic |
| GACCATGTACATTTCCCATT+TGG | 0.413557 | 2.3:-53533412 | None:intergenic |
| TCGTAAGAAAGGTACTCTTC+AGG | 0.428537 | 2.3:-53534722 | None:intergenic |
| TTAGGCAGTGGTGCTATAGC+TGG | 0.429341 | 2.3:+53534078 | MS.gene58676:CDS |
| AGTTCACTTGTTTGTACTGT+TGG | 0.437924 | 2.3:+53534782 | MS.gene58676:CDS |
| GAACAAGTTGGTTTCCCACT+TGG | 0.439155 | 2.3:+53534452 | MS.gene58676:CDS |
| GGTGTCGTTAAAGGCATAGC+TGG | 0.445854 | 2.3:+53534473 | MS.gene58676:CDS |
| AGTGCTAGTAATGTCATTCC+AGG | 0.447467 | 2.3:+53534824 | MS.gene58676:CDS |
| CATGGACATTGGAACAGTTC+CGG | 0.452698 | 2.3:-53534636 | None:intergenic |
| ATGGAAAGCTGCAAAATCTA+AGG | 0.459235 | 2.3:+53533700 | MS.gene58676:CDS |
| GTGGCAAGGCTTGTTGAGCT+TGG | 0.460871 | 2.3:+53532910 | MS.gene58676:CDS |
| AAATGGTTAGGAATTGAAAC+TGG | 0.465677 | 2.3:+53532835 | MS.gene58676:intron |
| AATGCAGAAGCTTTATTGGT+TGG | 0.467018 | 2.3:+53533455 | MS.gene58676:CDS |
| ATGTGCTAAACGATGATGTA+TGG | 0.472847 | 2.3:+53536058 | MS.gene58676:CDS |
| AACGATGATGTATGGGCGGC+AGG | 0.475444 | 2.3:+53536066 | MS.gene58676:CDS |
| CCAACATTAATGAGTGGAGC+AGG | 0.482594 | 2.3:+53535864 | MS.gene58676:CDS |
| CAAACTACTTTCTTAGGCAG+TGG | 0.493661 | 2.3:+53534066 | MS.gene58676:CDS |
| CATTGGAGATACCTGATAAG+AGG | 0.498225 | 2.3:+53534118 | MS.gene58676:CDS |
| GTCCATGCGTCAAGATCCTA+TGG | 0.502369 | 2.3:+53534652 | MS.gene58676:CDS |
| TTCAGTTGGGTGGACCAAAT+GGG | 0.503176 | 2.3:+53533398 | MS.gene58676:intron |
| TTGAAAGTTATGCATGTCAA+TGG | 0.509865 | 2.3:+53533681 | MS.gene58676:CDS |
| TGCAACGACCATCGTAAGAA+AGG | 0.515554 | 2.3:-53534733 | None:intergenic |
| GCTGCAGCTTCACATTGAGC+AGG | 0.516545 | 2.3:+53534418 | MS.gene58676:intron |
| AATGTACATGGTCGAGTTGA+GGG | 0.516730 | 2.3:+53533422 | MS.gene58676:CDS |
| GGTATCTCCAATGTTGTAGC+AGG | 0.519067 | 2.3:-53534108 | None:intergenic |
| TACCTTGTGTTCAATAAGGC+AGG | 0.520522 | 2.3:-53535065 | None:intergenic |
| GGTAAATTTGATGGAGCACT+AGG | 0.522882 | 2.3:+53533636 | MS.gene58676:CDS |
| ATACGAGCAATTGATGATAC+AGG | 0.526748 | 2.3:+53534977 | MS.gene58676:CDS |
| GGATCTTGACGCATGGACAT+TGG | 0.526811 | 2.3:-53534647 | None:intergenic |
| TAGGACACTGTTGTTGATGC+TGG | 0.528217 | 2.3:+53533615 | MS.gene58676:intron |
| TGTTCACCTCAGCATGATGC+AGG | 0.530008 | 2.3:+53535747 | MS.gene58676:intron |
| AAATCTTATTCGAAAATGGA+TGG | 0.534286 | 2.3:+53533290 | MS.gene58676:CDS |
| CGAAAATGGATGGAAGATGC+TGG | 0.534327 | 2.3:+53533300 | MS.gene58676:CDS |
| AGCTGGGCAGACAAGATTGA+AGG | 0.535514 | 2.3:+53534490 | MS.gene58676:CDS |
| ACATATCTGATAAATTCGAT+TGG | 0.541292 | 2.3:-53535026 | None:intergenic |
| GGTCCTGTGCTTGAACAAGT+TGG | 0.545766 | 2.3:+53534440 | MS.gene58676:CDS |
| TAGTAATGTCATTCCAGGCC+AGG | 0.550343 | 2.3:+53534829 | MS.gene58676:CDS |
| AAATCTAAGGCGTCCTGTTG+AGG | 0.552501 | 2.3:+53533713 | MS.gene58676:CDS |
| GACCAAATGGGAAATGTACA+TGG | 0.563951 | 2.3:+53533410 | MS.gene58676:CDS |
| TCGTTTAGCACATCCTCTTG+TGG | 0.566941 | 2.3:-53536048 | None:intergenic |
| CTGCAGCTTCACATTGAGCA+GGG | 0.575143 | 2.3:+53534419 | MS.gene58676:intron |
| TTCCTGCCTTATTGAACACA+AGG | 0.575456 | 2.3:+53535063 | MS.gene58676:CDS |
| ATCTGTTTGGGGTTATGTCG+AGG | 0.575812 | 2.3:+53534300 | MS.gene58676:CDS |
| AAAGGCTCACAAGGTCATGC+CGG | 0.576546 | 2.3:+53534617 | MS.gene58676:CDS |
| CAGCTTATTCTGCACTCAAG+AGG | 0.578224 | 2.3:+53535814 | MS.gene58676:CDS |
| TGTTCAGCAGCAGCCACCAT+AGG | 0.579164 | 2.3:-53534668 | None:intergenic |
| TGGAGCAGGGCATGATGCCA+TGG | 0.582009 | 2.3:+53535878 | MS.gene58676:CDS |
| GCCTCATCTCTTAGAATCTG+CGG | 0.585167 | 2.3:-53532886 | None:intergenic |
| AAACCAACTTGTTCAAGCAC+AGG | 0.588436 | 2.3:-53534443 | None:intergenic |
| ATCAATTGCTCGTATATCCA+CGG | 0.588827 | 2.3:-53534969 | None:intergenic |
| CCTGCTCCACTCATTAATGT+TGG | 0.589437 | 2.3:-53535864 | None:intergenic |
| GGAATGACATTACTAGCACT+TGG | 0.589744 | 2.3:-53534821 | None:intergenic |
| TTCTGCACTCAAGAGGATGG+AGG | 0.594618 | 2.3:+53535821 | MS.gene58676:CDS |
| GGCAATGTCTCACTTAACAA+AGG | 0.607328 | 2.3:+53535899 | MS.gene58676:CDS |
| ACTCTTCAGGATGTTTGCAG+AGG | 0.608033 | 2.3:-53534709 | None:intergenic |
| TTTATTGGTTGGATCTCACA+TGG | 0.610664 | 2.3:+53533466 | MS.gene58676:CDS |
| TCCGCAGATTCTAAGAGATG+AGG | 0.611127 | 2.3:+53532885 | MS.gene58676:CDS |
| AAGGCTTGTTGAGCTTGGAA+AGG | 0.612966 | 2.3:+53532915 | MS.gene58676:CDS |
| TTATTCTGCACTCAAGAGGA+TGG | 0.613099 | 2.3:+53535818 | MS.gene58676:CDS |
| AAATGTACATGGTCGAGTTG+AGG | 0.615458 | 2.3:+53533421 | MS.gene58676:CDS |
| AATAAGATTTATCGCCCTCG+TGG | 0.616684 | 2.3:-53533277 | None:intergenic |
| GTGTCGTTAAAGGCATAGCT+GGG | 0.619543 | 2.3:+53534474 | MS.gene58676:CDS |
| TCTGCACTCAAGAGGATGGA+GGG | 0.619874 | 2.3:+53535822 | MS.gene58676:CDS |
| GAACTCGATAGAAGCTGCGG+AGG | 0.620673 | 2.3:+53534246 | MS.gene58676:CDS |
| ATGCTGTTTGTGCGATGTCG+CGG | 0.620832 | 2.3:+53536009 | MS.gene58676:CDS |
| ATGCCTTTAACGACACCAAG+TGG | 0.623755 | 2.3:-53534467 | None:intergenic |
| AACGTCTTTCAGGAATGTAA+CGG | 0.625428 | 2.3:+53534204 | MS.gene58676:intron |
| CATAAGTCACTCTCCACAAG+AGG | 0.625552 | 2.3:+53536035 | MS.gene58676:CDS |
| CACCATAGGATCTTGACGCA+TGG | 0.629370 | 2.3:-53534654 | None:intergenic |
| GATTCTAAGAGATGAGGCAG+TGG | 0.632621 | 2.3:+53532891 | MS.gene58676:CDS |
| GTCACGGTTAAAGGCTCACA+AGG | 0.633455 | 2.3:+53534608 | MS.gene58676:CDS |
| ATGCTAGTGGCTATCTAGAG+AGG | 0.636846 | 2.3:+53533235 | MS.gene58676:CDS |
| TGTGCTAAACGATGATGTAT+GGG | 0.641420 | 2.3:+53536059 | MS.gene58676:CDS |
| GAAGTACCAACATTAATGAG+TGG | 0.642265 | 2.3:+53535858 | MS.gene58676:CDS |
| TAAGAGATGAGGCAGTGGCA+AGG | 0.651166 | 2.3:+53532896 | MS.gene58676:CDS |
| GTTGCAGGTTACATATACCG+TGG | 0.655260 | 2.3:+53534952 | MS.gene58676:intron |
| AGAGAACTCGATAGAAGCTG+CGG | 0.656218 | 2.3:+53534243 | MS.gene58676:CDS |
| TATGATCCAAAATCTGTTTG+GGG | 0.656816 | 2.3:+53534289 | MS.gene58676:CDS |
| TGTTAAGTGAGACATTGCCA+TGG | 0.658188 | 2.3:-53535895 | None:intergenic |
| CAACATTAATGAGTGGAGCA+GGG | 0.661114 | 2.3:+53535865 | MS.gene58676:CDS |
| AATTGATGATACAGGACGTG+AGG | 0.664831 | 2.3:+53534985 | MS.gene58676:CDS |
| TGCCTTTAACGACACCAAGT+GGG | 0.666563 | 2.3:-53534466 | None:intergenic |
| GAAGAGTACCTTTCTTACGA+TGG | 0.667691 | 2.3:+53534725 | MS.gene58676:CDS |
| GAACAGGTTAGCGATGCTAG+TGG | 0.671726 | 2.3:+53533222 | MS.gene58676:intron |
| TTTGAGTCATGCATCCACGA+GGG | 0.675190 | 2.3:+53533263 | MS.gene58676:CDS |
| CTGTTTGTGCGATGTCGCGG+AGG | 0.676245 | 2.3:+53536012 | MS.gene58676:CDS |
| CTGTTGGTGAAATATCAACA+TGG | 0.708340 | 2.3:+53534798 | MS.gene58676:CDS |
| CATGCGTCAAGATCCTATGG+TGG | 0.726797 | 2.3:+53534655 | MS.gene58676:CDS |
| GCTAAACGATGATGTATGGG+CGG | 0.742622 | 2.3:+53536062 | MS.gene58676:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATCAAATGTTAATATAT+TGG | + | chr2.3:53535939-53535958 | MS.gene58676:intron | 10.0% |
| !! | TATAAAATTCTTAGAATTTA+GGG | + | chr2.3:53535189-53535208 | MS.gene58676:intron | 10.0% |
| !! | TATAAATACTTATAGTAAAT+AGG | + | chr2.3:53535602-53535621 | MS.gene58676:intron | 10.0% |
| !! | TTATAAAATTCTTAGAATTT+AGG | + | chr2.3:53535188-53535207 | MS.gene58676:intron | 10.0% |
| !! | AAACAGCATATCATTAATAT+CGG | - | chr2.3:53534581-53534600 | None:intergenic | 20.0% |
| !! | AACTACAGTATAAATATTGA+TGG | - | chr2.3:53532980-53532999 | None:intergenic | 20.0% |
| !! | TAAGAAAATTGTATGTATGT+TGG | + | chr2.3:53532714-53532733 | MS.gene58676:intron | 20.0% |
| !! | TACATTATCGATAATTTGAA+AGG | + | chr2.3:53533066-53533085 | MS.gene58676:intron | 20.0% |
| !! | TTATGCTTAAAGAATATGTT+TGG | - | chr2.3:53535109-53535128 | None:intergenic | 20.0% |
| !! | TTTATTTATAAACGTCTTTC+AGG | + | chr2.3:53534194-53534213 | MS.gene58676:intron | 20.0% |
| !!! | AGTAAATAGGTATTTTTTGT+TGG | + | chr2.3:53535615-53535634 | MS.gene58676:intron | 20.0% |
| !!! | ATCAAAATTTTGCAATTTCA+GGG | - | chr2.3:53533094-53533113 | None:intergenic | 20.0% |
| !!! | GAGAAATTATTTAGAGTTAA+AGG | - | chr2.3:53533350-53533369 | None:intergenic | 20.0% |
| ! | AAACTGGAGATTTAGAAAAA+CGG | + | chr2.3:53532851-53532870 | MS.gene58676:CDS | 25.0% |
| ! | AAATCTTATTCGAAAATGGA+TGG | + | chr2.3:53533290-53533309 | MS.gene58676:CDS | 25.0% |
| ! | AAATGTGTTTAGATAAGTAG+TGG | - | chr2.3:53535445-53535464 | None:intergenic | 25.0% |
| ! | ACATATCTGATAAATTCGAT+TGG | - | chr2.3:53535029-53535048 | None:intergenic | 25.0% |
| ! | ACTCTTAATAAAAACGAATG+TGG | + | chr2.3:53535490-53535509 | MS.gene58676:intron | 25.0% |
| ! | AGATTTCAAACTACTTTCTT+AGG | + | chr2.3:53534060-53534079 | MS.gene58676:CDS | 25.0% |
| ! | CATTGAGTAAATATCCAAAT+TGG | + | chr2.3:53533007-53533026 | MS.gene58676:intron | 25.0% |
| ! | CGATAAATCTTATTCGAAAA+TGG | + | chr2.3:53533286-53533305 | MS.gene58676:CDS | 25.0% |
| ! | GAAATGTGTTTATAAGTGAT+GGG | - | chr2.3:53535256-53535275 | None:intergenic | 25.0% |
| ! | TACTTATCTAAACACATTTC+AGG | + | chr2.3:53535446-53535465 | MS.gene58676:intron | 25.0% |
| ! | TTAGAATATGACAATGAATG+AGG | + | chr2.3:53535970-53535989 | MS.gene58676:intron | 25.0% |
| !! | AGTTACTAGTTTCTGAAAAT+TGG | + | chr2.3:53532668-53532687 | MS.gene58676:intron | 25.0% |
| !! | ATTTGTTACATTGTTCTTAG+TGG | + | chr2.3:53533181-53533200 | MS.gene58676:intron | 25.0% |
| !! | GATCAAAATTTTGCAATTTC+AGG | - | chr2.3:53533095-53533114 | None:intergenic | 25.0% |
| !! | TGTTTTATCCTTTTAGATTG+AGG | - | chr2.3:53535539-53535558 | None:intergenic | 25.0% |
| !!! | AAATAGGTATTTTTTGTTGG+TGG | + | chr2.3:53535618-53535637 | MS.gene58676:intron | 25.0% |
| !!! | AATAGGTATTTTTTGTTGGT+GGG | + | chr2.3:53535619-53535638 | MS.gene58676:intron | 25.0% |
| !!! | AATGATGCCACTTTTTTTAT+TGG | + | chr2.3:53533974-53533993 | MS.gene58676:intron | 25.0% |
| !!! | ATGAGTATGTTATTTTCAGT+TGG | + | chr2.3:53533384-53533403 | MS.gene58676:intron | 25.0% |
| !!! | CTTAATTTAACTTGGAAGTA+GGG | + | chr2.3:53532737-53532756 | MS.gene58676:intron | 25.0% |
| !!! | TATGTTGGCTTAATTTAACT+TGG | + | chr2.3:53532729-53532748 | MS.gene58676:intron | 25.0% |
| !!! | TGAGTATGTTATTTTCAGTT+GGG | + | chr2.3:53533385-53533404 | MS.gene58676:intron | 25.0% |
| !!! | TTAATTTAACTTGGAAGTAG+GGG | + | chr2.3:53532738-53532757 | MS.gene58676:intron | 25.0% |
| AAAGATGAGTTCTTGAAGTT+AGG | - | chr2.3:53532943-53532962 | None:intergenic | 30.0% | |
| AAATGGTTAGGAATTGAAAC+TGG | + | chr2.3:53532835-53532854 | MS.gene58676:intron | 30.0% | |
| AACTGGAGATTTAGAAAAAC+GGG | + | chr2.3:53532852-53532871 | MS.gene58676:CDS | 30.0% | |
| ACCTTGGTTCAAATTGTATT+TGG | + | chr2.3:53532610-53532629 | MS.gene58676:intron | 30.0% | |
| AGTATGATCCAAAATCTGTT+TGG | + | chr2.3:53534287-53534306 | MS.gene58676:CDS | 30.0% | |
| ATACCTTATCCATACAAAAC+CGG | + | chr2.3:53535213-53535232 | MS.gene58676:intron | 30.0% | |
| ATATAATCACATGTGTCATC+TGG | - | chr2.3:53532367-53532386 | None:intergenic | 30.0% | |
| ATGATTCATTGAAAGGAATC+GGG | - | chr2.3:53533937-53533956 | None:intergenic | 30.0% | |
| CAAGATGATGATTCATTGAA+AGG | - | chr2.3:53533944-53533963 | None:intergenic | 30.0% | |
| CTCTTGTATGTGTATTCATT+TGG | + | chr2.3:53533871-53533890 | MS.gene58676:intron | 30.0% | |
| CTTTCAATGAATCATCATCT+TGG | + | chr2.3:53533942-53533961 | MS.gene58676:intron | 30.0% | |
| GATGACACCAATAAAAAAAG+TGG | - | chr2.3:53533984-53534003 | None:intergenic | 30.0% | |
| GATGATTCATTGAAAGGAAT+CGG | - | chr2.3:53533938-53533957 | None:intergenic | 30.0% | |
| GCTTAAAGAATATGTTTGGT+CGG | - | chr2.3:53535105-53535124 | None:intergenic | 30.0% | |
| GGAAATGTGTTTATAAGTGA+TGG | - | chr2.3:53535257-53535276 | None:intergenic | 30.0% | |
| GTATGATCCAAAATCTGTTT+GGG | + | chr2.3:53534288-53534307 | MS.gene58676:CDS | 30.0% | |
| GTCTCAAATTTGATGAGATA+AGG | - | chr2.3:53535472-53535491 | None:intergenic | 30.0% | |
| GTTTCATTCAATGTTAGTTG+AGG | - | chr2.3:53533511-53533530 | None:intergenic | 30.0% | |
| TAATGATATAGTCTGATGCA+CGG | + | chr2.3:53533778-53533797 | MS.gene58676:intron | 30.0% | |
| TATGATCCAAAATCTGTTTG+GGG | + | chr2.3:53534289-53534308 | MS.gene58676:CDS | 30.0% | |
| TCCAAATACAATTTGAACCA+AGG | - | chr2.3:53532614-53532633 | None:intergenic | 30.0% | |
| TGCTGAACAAATTGTACTTA+TGG | + | chr2.3:53534682-53534701 | MS.gene58676:CDS | 30.0% | |
| TGTTGAATATTAGTTCGACT+TGG | + | chr2.3:53532484-53532503 | MS.gene58676:intron | 30.0% | |
| TTAGAGTTAAAGGAGTTAGA+AGG | - | chr2.3:53533340-53533359 | None:intergenic | 30.0% | |
| TTGAAAGTTATGCATGTCAA+TGG | + | chr2.3:53533681-53533700 | MS.gene58676:CDS | 30.0% | |
| TTGTTCTTAGTGGTTAATGT+TGG | + | chr2.3:53533191-53533210 | MS.gene58676:intron | 30.0% | |
| TTTCAAATGCGTAAACAAGT+TGG | - | chr2.3:53534527-53534546 | None:intergenic | 30.0% | |
| ! | AAATTGGTATACAGGTTTTG+TGG | + | chr2.3:53532684-53532703 | MS.gene58676:intron | 30.0% |
| ! | ATTGCATTTTGTGATGAAGA+GGG | + | chr2.3:53534033-53534052 | MS.gene58676:CDS | 30.0% |
| ! | GTTTATCCAAGACACATTTT+AGG | - | chr2.3:53535351-53535370 | None:intergenic | 30.0% |
| ! | GTTTCTGAAAATTGGTATAC+AGG | + | chr2.3:53532676-53532695 | MS.gene58676:intron | 30.0% |
| ! | TATTTTACCTGCTACAACAT+TGG | + | chr2.3:53534101-53534120 | MS.gene58676:CDS | 30.0% |
| ! | TGTGATGATAATGTGATGAT+TGG | + | chr2.3:53534930-53534949 | MS.gene58676:intron | 30.0% |
| ! | TTCAATTCCTAACCATTTTC+AGG | - | chr2.3:53532833-53532852 | None:intergenic | 30.0% |
| !! | ACTTTGATGGGTACTTATTT+TGG | + | chr2.3:53533591-53533610 | MS.gene58676:intron | 30.0% |
| !! | AGGTTTTTCAGTTTGTTTTC+TGG | + | chr2.3:53535696-53535715 | MS.gene58676:intron | 30.0% |
| !! | GCTTAATTTAACTTGGAAGT+AGG | + | chr2.3:53532736-53532755 | MS.gene58676:intron | 30.0% |
| !!! | AATGATATGCTGTTTTGTGT+AGG | + | chr2.3:53534586-53534605 | MS.gene58676:intron | 30.0% |
| !!! | AGAGGTATCAAGGAAATTTT+TGG | + | chr2.3:53534136-53534155 | MS.gene58676:intron | 30.0% |
| !!! | CGGATTTCAGTTCTTTTTTA+CGG | - | chr2.3:53534561-53534580 | None:intergenic | 30.0% |
| !!! | GTTTGTTTTAGATCTTGTCT+AGG | + | chr2.3:53535676-53535695 | MS.gene58676:intron | 30.0% |
| AACCATTTCTTGACAGTTAG+TGG | + | chr2.3:53533533-53533552 | MS.gene58676:intron | 35.0% | |
| AACGTCTTTCAGGAATGTAA+CGG | + | chr2.3:53534204-53534223 | MS.gene58676:intron | 35.0% | |
| AATCATCATCTTGGAAATGC+TGG | + | chr2.3:53533951-53533970 | MS.gene58676:intron | 35.0% | |
| ACCATACCTTGTGTTCAATA+AGG | - | chr2.3:53535072-53535091 | None:intergenic | 35.0% | |
| ACTGGAGATTTAGAAAAACG+GGG | + | chr2.3:53532853-53532872 | MS.gene58676:CDS | 35.0% | |
| ACTTGGATGTCTTCAAATCA+TGG | + | chr2.3:53532501-53532520 | MS.gene58676:intron | 35.0% | |
| AGTCAAAGCAAGAACAACAA+TGG | - | chr2.3:53532122-53532141 | None:intergenic | 35.0% | |
| AGTCTCACGTAGTATGAAAT+AGG | - | chr2.3:53535284-53535303 | None:intergenic | 35.0% | |
| AGTTCACTTGTTTGTACTGT+TGG | + | chr2.3:53534782-53534801 | MS.gene58676:CDS | 35.0% | |
| ATCAATTGCTCGTATATCCA+CGG | - | chr2.3:53534972-53534991 | None:intergenic | 35.0% | |
| ATGCTTACCTGAAAATGGTT+AGG | + | chr2.3:53532823-53532842 | MS.gene58676:intron | 35.0% | |
| ATGGAAAGCTGCAAAATCTA+AGG | + | chr2.3:53533700-53533719 | MS.gene58676:CDS | 35.0% | |
| ATGTGCTAAACGATGATGTA+TGG | + | chr2.3:53536058-53536077 | MS.gene58676:CDS | 35.0% | |
| ATTCATGTCTCTGACTTTGA+TGG | + | chr2.3:53533578-53533597 | MS.gene58676:intron | 35.0% | |
| CAATGAATGAGGATTTGAAC+AGG | + | chr2.3:53535981-53536000 | MS.gene58676:intron | 35.0% | |
| CCAACTAATCTCTACAAAAC+TGG | + | chr2.3:53535400-53535419 | MS.gene58676:intron | 35.0% | |
| CCATAAAATGTGAATGTTGC+TGG | + | chr2.3:53533156-53533175 | MS.gene58676:intron | 35.0% | |
| GATACAGTCTTGCAATTTCA+AGG | - | chr2.3:53533034-53533053 | None:intergenic | 35.0% | |
| GCTAAATGCTTACCTGAAAA+TGG | + | chr2.3:53532818-53532837 | MS.gene58676:intron | 35.0% | |
| GGTGAACACAGAAAAATCAT+TGG | - | chr2.3:53535735-53535754 | None:intergenic | 35.0% | |
| GTCTCACGTAGTATGAAATA+GGG | - | chr2.3:53535283-53535302 | None:intergenic | 35.0% | |
| GTTGATGCTGGTAAATTTGA+TGG | + | chr2.3:53533627-53533646 | MS.gene58676:CDS | 35.0% | |
| TACCACTAACTGTCAAGAAA+TGG | - | chr2.3:53533538-53533557 | None:intergenic | 35.0% | |
| TAGTCGTTTATAGTGGTGTT+TGG | + | chr2.3:53534341-53534360 | MS.gene58676:intron | 35.0% | |
| TAGTGAATTGGGATTCAAGA+TGG | - | chr2.3:53533906-53533925 | None:intergenic | 35.0% | |
| TCATGTGATCTAATCTTTGC+AGG | + | chr2.3:53534008-53534027 | MS.gene58676:intron | 35.0% | |
| TGATGTCTTTCTAAGTGAGA+GGG | + | chr2.3:53535143-53535162 | MS.gene58676:intron | 35.0% | |
| TGCAATTTCAAGGACCAATT+TGG | - | chr2.3:53533024-53533043 | None:intergenic | 35.0% | |
| TGTGCTAAACGATGATGTAT+GGG | + | chr2.3:53536059-53536078 | MS.gene58676:CDS | 35.0% | |
| TTAGTGGTTAATGTTGGTGT+TGG | + | chr2.3:53533197-53533216 | MS.gene58676:intron | 35.0% | |
| TTCATGTCTCTGACTTTGAT+GGG | + | chr2.3:53533579-53533598 | MS.gene58676:intron | 35.0% | |
| TTTCCAAAAAGCTGTTGATC+TGG | + | chr2.3:53534863-53534882 | MS.gene58676:intron | 35.0% | |
| TTTCCTTGATACCTCTTATC+AGG | - | chr2.3:53534132-53534151 | None:intergenic | 35.0% | |
| TTTGCGTTAGTCGTTTATAG+TGG | + | chr2.3:53534334-53534353 | MS.gene58676:intron | 35.0% | |
| ! | ACAAGATCTAAAACAAACCC+AGG | - | chr2.3:53535674-53535693 | None:intergenic | 35.0% |
| ! | ACATAACCCCAAACAGATTT+TGG | - | chr2.3:53534298-53534317 | None:intergenic | 35.0% |
| ! | ATAATGTGATGATTGGTTGC+AGG | + | chr2.3:53534937-53534956 | MS.gene58676:intron | 35.0% |
| ! | ATACGAGCAATTGATGATAC+AGG | + | chr2.3:53534977-53534996 | MS.gene58676:CDS | 35.0% |
| ! | CCAGCAACATTCACATTTTA+TGG | - | chr2.3:53533159-53533178 | None:intergenic | 35.0% |
| ! | CTGTTGGTGAAATATCAACA+TGG | + | chr2.3:53534798-53534817 | MS.gene58676:CDS | 35.0% |
| ! | GAAGTACCAACATTAATGAG+TGG | + | chr2.3:53535858-53535877 | MS.gene58676:CDS | 35.0% |
| ! | GATTGCATTTTGTGATGAAG+AGG | + | chr2.3:53534032-53534051 | MS.gene58676:CDS | 35.0% |
| ! | TCTTGCTTTGACTCTTTTTC+TGG | + | chr2.3:53532129-53532148 | MS.gene58676:intron | 35.0% |
| ! | TGCAAATGCAGAAGCTTTAT+TGG | + | chr2.3:53533451-53533470 | MS.gene58676:CDS | 35.0% |
| ! | TTTATTGGTTGGATCTCACA+TGG | + | chr2.3:53533466-53533485 | MS.gene58676:CDS | 35.0% |
| !! | AAACCGGTTTTGTATGGATA+AGG | - | chr2.3:53535219-53535238 | None:intergenic | 35.0% |
| !! | AATGCAGAAGCTTTATTGGT+TGG | + | chr2.3:53533455-53533474 | MS.gene58676:CDS | 35.0% |
| !! | ATACCTGATAAGAGGTATCA+AGG | + | chr2.3:53534126-53534145 | MS.gene58676:intron | 35.0% |
| !! | CCAGTTTTGTAGAGATTAGT+TGG | - | chr2.3:53535403-53535422 | None:intergenic | 35.0% |
| !!! | GATGGGTACTTATTTTGGTT+AGG | + | chr2.3:53533596-53533615 | MS.gene58676:intron | 35.0% |
| !!! | GTATGTTATTTTCAGTTGGG+TGG | + | chr2.3:53533388-53533407 | MS.gene58676:intron | 35.0% |
| !!! | GTTGTGATGTGTGTTTTTTG+TGG | + | chr2.3:53532269-53532288 | MS.gene58676:intron | 35.0% |
| AAGCTGCAGCACATAAGAAA+TGG | - | chr2.3:53534408-53534427 | None:intergenic | 40.0% | |
| AATAAGATTTATCGCCCTCG+TGG | - | chr2.3:53533280-53533299 | None:intergenic | 40.0% | |
| ACACTACTTACCACTATGCT+AGG | + | chr2.3:53535559-53535578 | MS.gene58676:intron | 40.0% | |
| ACGTAGTATGAAATAGGGAC+TGG | - | chr2.3:53535278-53535297 | None:intergenic | 40.0% | |
| AGCTGCAGCACATAAGAAAT+GGG | - | chr2.3:53534407-53534426 | None:intergenic | 40.0% | |
| AGGTCGAACCTCAATCTAAA+AGG | + | chr2.3:53535528-53535547 | MS.gene58676:intron | 40.0% | |
| AGTGCTAGTAATGTCATTCC+AGG | + | chr2.3:53534824-53534843 | MS.gene58676:CDS | 40.0% | |
| CAAACTACTTTCTTAGGCAG+TGG | + | chr2.3:53534066-53534085 | MS.gene58676:CDS | 40.0% | |
| CAACATTAATGAGTGGAGCA+GGG | + | chr2.3:53535865-53535884 | MS.gene58676:CDS | 40.0% | |
| CATTGGAGATACCTGATAAG+AGG | + | chr2.3:53534118-53534137 | MS.gene58676:CDS | 40.0% | |
| CCAAGACCTAAAATGTGTCT+TGG | + | chr2.3:53535342-53535361 | MS.gene58676:intron | 40.0% | |
| CTAAAACAAACCCAGGCATA+AGG | - | chr2.3:53535667-53535686 | None:intergenic | 40.0% | |
| CTGATGTCTTTCTAAGTGAG+AGG | + | chr2.3:53535142-53535161 | MS.gene58676:intron | 40.0% | |
| GAATGAGGATTTGAACAGGT+GGG | + | chr2.3:53535985-53536004 | MS.gene58676:intron | 40.0% | |
| GACCAAATGGGAAATGTACA+TGG | + | chr2.3:53533410-53533429 | MS.gene58676:CDS | 40.0% | |
| GACCATGTACATTTCCCATT+TGG | - | chr2.3:53533415-53533434 | None:intergenic | 40.0% | |
| GGAATGACATTACTAGCACT+TGG | - | chr2.3:53534824-53534843 | None:intergenic | 40.0% | |
| GGACTAACACCTCTGATAAA+AGG | + | chr2.3:53532327-53532346 | MS.gene58676:intron | 40.0% | |
| GGCAATGTCTCACTTAACAA+AGG | + | chr2.3:53535899-53535918 | MS.gene58676:CDS | 40.0% | |
| GGGATTCAGCATAGTGAATT+GGG | - | chr2.3:53533917-53533936 | None:intergenic | 40.0% | |
| TACCTTGTGTTCAATAAGGC+AGG | - | chr2.3:53535068-53535087 | None:intergenic | 40.0% | |
| TCACTCTCTTATTGCATTGC+TGG | - | chr2.3:53532646-53532665 | None:intergenic | 40.0% | |
| TGAATGAGGATTTGAACAGG+TGG | + | chr2.3:53535984-53536003 | MS.gene58676:intron | 40.0% | |
| TGTTAAGTGAGACATTGCCA+TGG | - | chr2.3:53535898-53535917 | None:intergenic | 40.0% | |
| TTATTCTGCACTCAAGAGGA+TGG | + | chr2.3:53535818-53535837 | MS.gene58676:CDS | 40.0% | |
| TTCAGCTGTGAACTTAGTTC+TGG | - | chr2.3:53535789-53535808 | None:intergenic | 40.0% | |
| TTGATCTGGTGATCTTCAAG+TGG | + | chr2.3:53534877-53534896 | MS.gene58676:intron | 40.0% | |
| TTTGTGTAGGTCACGGTTAA+AGG | + | chr2.3:53534599-53534618 | MS.gene58676:intron | 40.0% | |
| ! | AAACCAACTTGTTCAAGCAC+AGG | - | chr2.3:53534446-53534465 | None:intergenic | 40.0% |
| ! | AAATGTACATGGTCGAGTTG+AGG | + | chr2.3:53533421-53533440 | MS.gene58676:CDS | 40.0% |
| ! | AATTGATGATACAGGACGTG+AGG | + | chr2.3:53534985-53535004 | MS.gene58676:CDS | 40.0% |
| ! | CGTACGGCAATTTAAAACCT+TGG | + | chr2.3:53532594-53532613 | MS.gene58676:intron | 40.0% |
| ! | GCCTTATTGAACACAAGGTA+TGG | + | chr2.3:53535068-53535087 | MS.gene58676:intron | 40.0% |
| ! | GGTAAATTTGATGGAGCACT+AGG | + | chr2.3:53533636-53533655 | MS.gene58676:CDS | 40.0% |
| ! | TCACCAGATCAACAGCTTTT+TGG | - | chr2.3:53534869-53534888 | None:intergenic | 40.0% |
| ! | TTCCTGCCTTATTGAACACA+AGG | + | chr2.3:53535063-53535082 | MS.gene58676:CDS | 40.0% |
| !! | AATGTACATGGTCGAGTTGA+GGG | + | chr2.3:53533422-53533441 | MS.gene58676:CDS | 40.0% |
| !! | AATGTTGGTGTTGGATGAAC+AGG | + | chr2.3:53533206-53533225 | MS.gene58676:intron | 40.0% |
| !! | CCAAGACACATTTTAGGTCT+TGG | - | chr2.3:53535345-53535364 | None:intergenic | 40.0% |
| !! | CCATACAAAACCGGTTTGTA+AGG | + | chr2.3:53535222-53535241 | MS.gene58676:intron | 40.0% |
| !! | CCTTACAAACCGGTTTTGTA+TGG | - | chr2.3:53535225-53535244 | None:intergenic | 40.0% |
| !! | CTCTACAAAACTGGCTTGTA+AGG | + | chr2.3:53535409-53535428 | MS.gene58676:intron | 40.0% |
| !! | GAAGAGTACCTTTCTTACGA+TGG | + | chr2.3:53534725-53534744 | MS.gene58676:CDS | 40.0% |
| !! | TCGTAAGAAAGGTACTCTTC+AGG | - | chr2.3:53534725-53534744 | None:intergenic | 40.0% |
| !! | TTGTTAGCTCTGTAGCACTA+AGG | + | chr2.3:53532306-53532325 | MS.gene58676:intron | 40.0% |
| !!! | ATGCTGTTTTGTGTAGGTCA+CGG | + | chr2.3:53534592-53534611 | MS.gene58676:intron | 40.0% |
| AAACAAACCCAGGCATAAGG+TGG | - | chr2.3:53535664-53535683 | None:intergenic | 45.0% | |
| AACTAGCATGCCTAGCATAG+TGG | - | chr2.3:53535572-53535591 | None:intergenic | 45.0% | |
| ACTCTTCAGGATGTTTGCAG+AGG | - | chr2.3:53534712-53534731 | None:intergenic | 45.0% | |
| ACTGCTCTCACATTCAGAAC+TGG | + | chr2.3:53535312-53535331 | MS.gene58676:intron | 45.0% | |
| AGAGAACTCGATAGAAGCTG+CGG | + | chr2.3:53534243-53534262 | MS.gene58676:CDS | 45.0% | |
| ATGCCTTTAACGACACCAAG+TGG | - | chr2.3:53534470-53534489 | None:intergenic | 45.0% | |
| ATGCTAGTGGCTATCTAGAG+AGG | + | chr2.3:53533235-53533254 | MS.gene58676:CDS | 45.0% | |
| CAGCTTATTCTGCACTCAAG+AGG | + | chr2.3:53535814-53535833 | MS.gene58676:CDS | 45.0% | |
| CATAAGTCACTCTCCACAAG+AGG | + | chr2.3:53536035-53536054 | MS.gene58676:CDS | 45.0% | |
| CATGGACATTGGAACAGTTC+CGG | - | chr2.3:53534639-53534658 | None:intergenic | 45.0% | |
| CCAACATTAATGAGTGGAGC+AGG | + | chr2.3:53535864-53535883 | MS.gene58676:CDS | 45.0% | |
| CCTGCTCCACTCATTAATGT+TGG | - | chr2.3:53535867-53535886 | None:intergenic | 45.0% | |
| CGAAAATGGATGGAAGATGC+TGG | + | chr2.3:53533300-53533319 | MS.gene58676:CDS | 45.0% | |
| CGGGATTCAGCATAGTGAAT+TGG | - | chr2.3:53533918-53533937 | None:intergenic | 45.0% | |
| GAGGGAGTAACAGAAAAGTC+AGG | + | chr2.3:53535161-53535180 | MS.gene58676:intron | 45.0% | |
| GCCTCATCTCTTAGAATCTG+CGG | - | chr2.3:53532889-53532908 | None:intergenic | 45.0% | |
| GCTAAACGATGATGTATGGG+CGG | + | chr2.3:53536062-53536081 | MS.gene58676:CDS | 45.0% | |
| GCTTAAATTGCAGCTGCGTA+CGG | + | chr2.3:53532578-53532597 | MS.gene58676:intron | 45.0% | |
| GGCTTCGTGGATGTTTATGA+TGG | + | chr2.3:53532455-53532474 | MS.gene58676:intron | 45.0% | |
| GGTATCTCCAATGTTGTAGC+AGG | - | chr2.3:53534111-53534130 | None:intergenic | 45.0% | |
| GTTGCAGGTTACATATACCG+TGG | + | chr2.3:53534952-53534971 | MS.gene58676:intron | 45.0% | |
| TAGGACACTGTTGTTGATGC+TGG | + | chr2.3:53533615-53533634 | MS.gene58676:intron | 45.0% | |
| TAGTAATGTCATTCCAGGCC+AGG | + | chr2.3:53534829-53534848 | MS.gene58676:CDS | 45.0% | |
| TCACATGTGTCATCTGGTGT+TGG | - | chr2.3:53532361-53532380 | None:intergenic | 45.0% | |
| TCGTTTAGCACATCCTCTTG+TGG | - | chr2.3:53536051-53536070 | None:intergenic | 45.0% | |
| TGCAACGACCATCGTAAGAA+AGG | - | chr2.3:53534736-53534755 | None:intergenic | 45.0% | |
| TGCCTTTAACGACACCAAGT+GGG | - | chr2.3:53534469-53534488 | None:intergenic | 45.0% | |
| TGGGCCTAAAGTAAGGACTT+GGG | + | chr2.3:53535638-53535657 | MS.gene58676:intron | 45.0% | |
| TTCAGTTGGGTGGACCAAAT+GGG | + | chr2.3:53533398-53533417 | MS.gene58676:intron | 45.0% | |
| TTTCAGTTGGGTGGACCAAA+TGG | + | chr2.3:53533397-53533416 | MS.gene58676:intron | 45.0% | |
| TTTGAGTCATGCATCCACGA+GGG | + | chr2.3:53533263-53533282 | MS.gene58676:CDS | 45.0% | |
| ! | AAATCTAAGGCGTCCTGTTG+AGG | + | chr2.3:53533713-53533732 | MS.gene58676:CDS | 45.0% |
| ! | ATCTGTTTGGGGTTATGTCG+AGG | + | chr2.3:53534300-53534319 | MS.gene58676:CDS | 45.0% |
| ! | GAGGACACACCTTTTATCAG+AGG | - | chr2.3:53532339-53532358 | None:intergenic | 45.0% |
| ! | GATTCTAAGAGATGAGGCAG+TGG | + | chr2.3:53532891-53532910 | MS.gene58676:CDS | 45.0% |
| ! | GTGTCGTTAAAGGCATAGCT+GGG | + | chr2.3:53534474-53534493 | MS.gene58676:CDS | 45.0% |
| ! | TCCGCAGATTCTAAGAGATG+AGG | + | chr2.3:53532885-53532904 | MS.gene58676:CDS | 45.0% |
| ! | TTGGAAATTTGTCGCTTGCC+TGG | - | chr2.3:53534850-53534869 | None:intergenic | 45.0% |
| ! | TTGTTGGTGGGCCTAAAGTA+AGG | + | chr2.3:53535631-53535650 | MS.gene58676:intron | 45.0% |
| !! | AAGGCTTGTTGAGCTTGGAA+AGG | + | chr2.3:53532915-53532934 | MS.gene58676:CDS | 45.0% |
| !! | GAACAAGTTGGTTTCCCACT+TGG | + | chr2.3:53534452-53534471 | MS.gene58676:CDS | 45.0% |
| !! | TTCCCACTTGGTGTCGTTAA+AGG | + | chr2.3:53534464-53534483 | MS.gene58676:CDS | 45.0% |
| !! | TTTTGAGTCATGCATCCACG+AGG | + | chr2.3:53533262-53533281 | MS.gene58676:CDS | 45.0% |
| !! | ATAAAAAAAAAAAAAAAAAG+TGG | + | chr2.3:53532203-53532222 | MS.gene58676:intron | 5.0% |
| AAAGGCTCACAAGGTCATGC+CGG | + | chr2.3:53534617-53534636 | MS.gene58676:CDS | 50.0% | |
| AGCTGGGCAGACAAGATTGA+AGG | + | chr2.3:53534490-53534509 | MS.gene58676:CDS | 50.0% | |
| AGGTCAGTGTGTCAAGCAAC+TGG | + | chr2.3:53533733-53533752 | MS.gene58676:intron | 50.0% | |
| CACCATAGGATCTTGACGCA+TGG | - | chr2.3:53534657-53534676 | None:intergenic | 50.0% | |
| CATGCGTCAAGATCCTATGG+TGG | + | chr2.3:53534655-53534674 | MS.gene58676:CDS | 50.0% | |
| CTGCAGCTTCACATTGAGCA+GGG | + | chr2.3:53534419-53534438 | MS.gene58676:intron | 50.0% | |
| CTTGACACACTGACCTCAAC+AGG | - | chr2.3:53533729-53533748 | None:intergenic | 50.0% | |
| GAACAGGTTAGCGATGCTAG+TGG | + | chr2.3:53533222-53533241 | MS.gene58676:intron | 50.0% | |
| GGATCTTGACGCATGGACAT+TGG | - | chr2.3:53534650-53534669 | None:intergenic | 50.0% | |
| GGCAGAGAGACCTTACAAAC+CGG | - | chr2.3:53535235-53535254 | None:intergenic | 50.0% | |
| GGTCCTGTGCTTGAACAAGT+TGG | + | chr2.3:53534440-53534459 | MS.gene58676:CDS | 50.0% | |
| GTCACGGTTAAAGGCTCACA+AGG | + | chr2.3:53534608-53534627 | MS.gene58676:CDS | 50.0% | |
| GTCCATGCGTCAAGATCCTA+TGG | + | chr2.3:53534652-53534671 | MS.gene58676:CDS | 50.0% | |
| GTGGCCCAAGTCCTTACTTT+AGG | - | chr2.3:53535645-53535664 | None:intergenic | 50.0% | |
| GTGGGCCTAAAGTAAGGACT+TGG | + | chr2.3:53535637-53535656 | MS.gene58676:intron | 50.0% | |
| TAAGAGATGAGGCAGTGGCA+AGG | + | chr2.3:53532896-53532915 | MS.gene58676:CDS | 50.0% | |
| TCTGCACTCAAGAGGATGGA+GGG | + | chr2.3:53535822-53535841 | MS.gene58676:CDS | 50.0% | |
| TGTTCACCTCAGCATGATGC+AGG | + | chr2.3:53535747-53535766 | MS.gene58676:intron | 50.0% | |
| TTCTGCACTCAAGAGGATGG+AGG | + | chr2.3:53535821-53535840 | MS.gene58676:CDS | 50.0% | |
| ! | ATGCTGTTTGTGCGATGTCG+CGG | + | chr2.3:53536009-53536028 | MS.gene58676:CDS | 50.0% |
| ! | CATGTGTCATCTGGTGTTGG+AGG | - | chr2.3:53532358-53532377 | None:intergenic | 50.0% |
| ! | CGATGTGTCATTACCGTGTC+CGG | + | chr2.3:53532416-53532435 | MS.gene58676:intron | 50.0% |
| !! | CAAAACTGGCTTGTAAGGCG+AGG | + | chr2.3:53535414-53535433 | MS.gene58676:intron | 50.0% |
| !! | GGTGTCGTTAAAGGCATAGC+TGG | + | chr2.3:53534473-53534492 | MS.gene58676:CDS | 50.0% |
| !! | TTAGGCAGTGGTGCTATAGC+TGG | + | chr2.3:53534078-53534097 | MS.gene58676:CDS | 50.0% |
| AACGATGATGTATGGGCGGC+AGG | + | chr2.3:53536066-53536085 | MS.gene58676:CDS | 55.0% | |
| ACAGCACCTGCATCATGCTG+AGG | - | chr2.3:53535756-53535775 | None:intergenic | 55.0% | |
| ACTTGGGCCACCTTATGCCT+GGG | + | chr2.3:53535654-53535673 | MS.gene58676:intron | 55.0% | |
| GAACTCGATAGAAGCTGCGG+AGG | + | chr2.3:53534246-53534265 | MS.gene58676:CDS | 55.0% | |
| GATTGAGGTTCGACCTCTGC+TGG | - | chr2.3:53535524-53535543 | None:intergenic | 55.0% | |
| GCTGCAGCTTCACATTGAGC+AGG | + | chr2.3:53534418-53534437 | MS.gene58676:intron | 55.0% | |
| TGTGGCTTCTGTTCCAGCAG+AGG | + | chr2.3:53535508-53535527 | MS.gene58676:intron | 55.0% | |
| TGTTCAGCAGCAGCCACCAT+AGG | - | chr2.3:53534671-53534690 | None:intergenic | 55.0% | |
| ! | AATTTGTCGCTTGCCTGGCC+TGG | - | chr2.3:53534845-53534864 | None:intergenic | 55.0% |
| !! | GTGGCAAGGCTTGTTGAGCT+TGG | + | chr2.3:53532910-53532929 | MS.gene58676:CDS | 55.0% |
| CACGAAGCCCTGAGTGACAC+AGG | - | chr2.3:53532444-53532463 | None:intergenic | 60.0% | |
| CTGTTTGTGCGATGTCGCGG+AGG | + | chr2.3:53536012-53536031 | MS.gene58676:CDS | 60.0% | |
| GACTTGGGCCACCTTATGCC+TGG | + | chr2.3:53535653-53535672 | MS.gene58676:intron | 60.0% | |
| TGGAGCAGGGCATGATGCCA+TGG | + | chr2.3:53535878-53535897 | MS.gene58676:CDS | 60.0% | |
| ! | CTGTGTCACTCAGGGCTTCG+TGG | + | chr2.3:53532442-53532461 | MS.gene58676:intron | 60.0% |
| ! | TCCGGTGCCTGTGTCACTCA+GGG | + | chr2.3:53532434-53532453 | MS.gene58676:intron | 60.0% |
| !! | AGTGACACAGGCACCGGACA+CGG | - | chr2.3:53532432-53532451 | None:intergenic | 60.0% |
| GCCCTGAGTGACACAGGCAC+CGG | - | chr2.3:53532438-53532457 | None:intergenic | 65.0% | |
| ! | GTCCGGTGCCTGTGTCACTC+AGG | + | chr2.3:53532433-53532452 | MS.gene58676:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 53532101 | 53536125 | 53532101 | ID=MS.gene58676 |
| chr2.3 | mRNA | 53532101 | 53536125 | 53532101 | ID=MS.gene58676.t1;Parent=MS.gene58676 |
| chr2.3 | exon | 53532101 | 53532113 | 53532101 | ID=MS.gene58676.t1.exon1;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53532101 | 53532113 | 53532101 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53532845 | 53532936 | 53532845 | ID=MS.gene58676.t1.exon2;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53532845 | 53532936 | 53532845 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53533228 | 53533331 | 53533228 | ID=MS.gene58676.t1.exon3;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53533228 | 53533331 | 53533228 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53533403 | 53533487 | 53533403 | ID=MS.gene58676.t1.exon4;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53533403 | 53533487 | 53533403 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53533618 | 53533734 | 53533618 | ID=MS.gene58676.t1.exon5;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53533618 | 53533734 | 53533618 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53534030 | 53534139 | 53534030 | ID=MS.gene58676.t1.exon6;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53534030 | 53534139 | 53534030 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53534216 | 53534321 | 53534216 | ID=MS.gene58676.t1.exon7;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53534216 | 53534321 | 53534216 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53534425 | 53534511 | 53534425 | ID=MS.gene58676.t1.exon8;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53534425 | 53534511 | 53534425 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53534608 | 53534850 | 53534608 | ID=MS.gene58676.t1.exon9;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53534608 | 53534850 | 53534608 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53534959 | 53535084 | 53534959 | ID=MS.gene58676.t1.exon10;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53534959 | 53535084 | 53534959 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53535759 | 53535920 | 53535759 | ID=MS.gene58676.t1.exon11;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53535759 | 53535920 | 53535759 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| chr2.3 | exon | 53536003 | 53536125 | 53536003 | ID=MS.gene58676.t1.exon12;Parent=MS.gene58676.t1 |
| chr2.3 | CDS | 53536003 | 53536125 | 53536003 | ID=cds.MS.gene58676.t1;Parent=MS.gene58676.t1 |
| Gene Sequence |
| Protein sequence |
