Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37910.t1 | XP_003616931.1 | 97.4 | 587 | 15 | 0 | 1 | 587 | 1 | 587 | 0.00E+00 | 1120.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37910.t1 | Q9LVE0 | 70.7 | 573 | 161 | 3 | 5 | 572 | 6 | 576 | 5.9e-231 | 801.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37910.t1 | D5LQ68 | 97.4 | 587 | 15 | 0 | 1 | 587 | 1 | 587 | 0.0e+00 | 1120.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene37910 | 0.806988 | 6.29E-50 | -1.69E-46 |
| MS.gene049150 | MS.gene37910 | 0.851962 | 6.30E-61 | -1.69E-46 |
| MS.gene049151 | MS.gene37910 | 0.817499 | 3.19E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene37910 | 0.856948 | 2.28E-62 | -1.69E-46 |
| MS.gene049260 | MS.gene37910 | 0.816485 | 5.40E-52 | -1.69E-46 |
| MS.gene049356 | MS.gene37910 | 0.870474 | 1.42E-66 | -1.69E-46 |
| MS.gene049369 | MS.gene37910 | 0.830422 | 2.96E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene37910 | 0.840434 | 8.72E-58 | -1.69E-46 |
| MS.gene049910 | MS.gene37910 | 0.800884 | 1.17E-48 | -1.69E-46 |
| MS.gene050128 | MS.gene37910 | 0.877801 | 4.69E-69 | -1.69E-46 |
| MS.gene050301 | MS.gene37910 | 0.82641 | 2.75E-54 | -1.69E-46 |
| MS.gene050464 | MS.gene37910 | 0.812475 | 4.16E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene37910 | 0.80801 | 3.82E-50 | -1.69E-46 |
| MS.gene050900 | MS.gene37910 | 0.830493 | 2.85E-55 | -1.69E-46 |
| MS.gene050971 | MS.gene37910 | 0.830489 | 2.85E-55 | -1.69E-46 |
| MS.gene051360 | MS.gene37910 | 0.811839 | 5.73E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene37910 | 0.854268 | 1.38E-61 | -1.69E-46 |
| MS.gene051983 | MS.gene37910 | 0.800254 | 1.57E-48 | -1.69E-46 |
| MS.gene052077 | MS.gene37910 | 0.839649 | 1.40E-57 | -1.69E-46 |
| MS.gene052135 | MS.gene37910 | 0.802903 | 4.50E-49 | -1.69E-46 |
| MS.gene052136 | MS.gene37910 | 0.801413 | 9.11E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene37910 | 0.821708 | 3.50E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene37910 | 0.852113 | 5.71E-61 | -1.69E-46 |
| MS.gene052253 | MS.gene37910 | 0.838421 | 2.91E-57 | -1.69E-46 |
| MS.gene05233 | MS.gene37910 | -0.810172 | 1.32E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene37910 | 0.851087 | 1.11E-60 | -1.69E-46 |
| MS.gene052485 | MS.gene37910 | 0.805831 | 1.10E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene37910 | -0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene053073 | MS.gene37910 | 0.823194 | 1.58E-53 | -1.69E-46 |
| MS.gene05316 | MS.gene37910 | 0.896845 | 2.49E-76 | -1.69E-46 |
| MS.gene053209 | MS.gene37910 | 0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene053301 | MS.gene37910 | 0.808905 | 2.46E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene37910 | 0.818336 | 2.07E-52 | -1.69E-46 |
| MS.gene053494 | MS.gene37910 | 0.82677 | 2.26E-54 | -1.69E-46 |
| MS.gene053557 | MS.gene37910 | 0.830046 | 3.66E-55 | -1.69E-46 |
| MS.gene053559 | MS.gene37910 | 0.816031 | 6.82E-52 | -1.69E-46 |
| MS.gene053577 | MS.gene37910 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene37910 | 0.833946 | 3.98E-56 | -1.69E-46 |
| MS.gene053912 | MS.gene37910 | 0.824199 | 9.19E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene37910 | 0.814936 | 1.20E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene37910 | 0.828665 | 7.92E-55 | -1.69E-46 |
| MS.gene054012 | MS.gene37910 | 0.81829 | 2.12E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene37910 | 0.813585 | 2.38E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene37910 | 0.805205 | 1.49E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene37910 | 0.838723 | 2.43E-57 | -1.69E-46 |
| MS.gene054184 | MS.gene37910 | 0.808449 | 3.08E-50 | -1.69E-46 |
| MS.gene054185 | MS.gene37910 | 0.80042 | 1.45E-48 | -1.69E-46 |
| MS.gene054349 | MS.gene37910 | 0.842883 | 1.97E-58 | -1.69E-46 |
| MS.gene054473 | MS.gene37910 | 0.807047 | 6.12E-50 | -1.69E-46 |
| MS.gene054542 | MS.gene37910 | 0.823797 | 1.14E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene37910 | 0.80271 | 4.93E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene37910 | 0.837665 | 4.55E-57 | -1.69E-46 |
| MS.gene055277 | MS.gene37910 | 0.810901 | 9.15E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene37910 | 0.812924 | 3.32E-51 | -1.69E-46 |
| MS.gene055533 | MS.gene37910 | 0.803187 | 3.93E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene37910 | 0.837513 | 4.97E-57 | -1.69E-46 |
| MS.gene055666 | MS.gene37910 | 0.827707 | 1.35E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene37910 | 0.806979 | 6.32E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene37910 | 0.813578 | 2.38E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene37910 | 0.801505 | 8.72E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene37910 | 0.802826 | 4.67E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene37910 | 0.821433 | 4.05E-53 | -1.69E-46 |
| MS.gene056899 | MS.gene37910 | -0.812752 | 3.62E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene37910 | 0.803457 | 3.45E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene37910 | 0.814091 | 1.84E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene37910 | 0.849045 | 4.16E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene37910 | 0.880827 | 3.98E-70 | -1.69E-46 |
| MS.gene057449 | MS.gene37910 | 0.878822 | 2.06E-69 | -1.69E-46 |
| MS.gene057450 | MS.gene37910 | 0.882078 | 1.41E-70 | -1.69E-46 |
| MS.gene057469 | MS.gene37910 | 0.817362 | 3.43E-52 | -1.69E-46 |
| MS.gene057537 | MS.gene37910 | 0.851171 | 1.06E-60 | -1.69E-46 |
| MS.gene057749 | MS.gene37910 | 0.816432 | 5.55E-52 | -1.69E-46 |
| MS.gene057779 | MS.gene37910 | 0.811735 | 6.04E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene37910 | 0.816675 | 4.89E-52 | -1.69E-46 |
| MS.gene057927 | MS.gene37910 | 0.818202 | 2.22E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene37910 | 0.823536 | 1.31E-53 | -1.69E-46 |
| MS.gene058075 | MS.gene37910 | 0.80395 | 2.73E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene37910 | 0.825902 | 3.64E-54 | -1.69E-46 |
| MS.gene05842 | MS.gene37910 | 0.800302 | 1.54E-48 | -1.69E-46 |
| MS.gene058435 | MS.gene37910 | 0.81408 | 1.85E-51 | -1.69E-46 |
| MS.gene05856 | MS.gene37910 | 0.841102 | 5.83E-58 | -1.69E-46 |
| MS.gene05858 | MS.gene37910 | 0.841838 | 3.73E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene37910 | 0.867603 | 1.21E-65 | -1.69E-46 |
| MS.gene058949 | MS.gene37910 | 0.840156 | 1.03E-57 | -1.69E-46 |
| MS.gene059043 | MS.gene37910 | -0.80173 | 7.85E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene37910 | 0.83306 | 6.62E-56 | -1.69E-46 |
| MS.gene059285 | MS.gene37910 | 0.861412 | 1.04E-63 | -1.69E-46 |
| MS.gene059294 | MS.gene37910 | 0.836675 | 8.15E-57 | -1.69E-46 |
| MS.gene059366 | MS.gene37910 | 0.857524 | 1.54E-62 | -1.69E-46 |
| MS.gene059420 | MS.gene37910 | 0.850545 | 1.58E-60 | -1.69E-46 |
| MS.gene059462 | MS.gene37910 | 0.801067 | 1.07E-48 | -1.69E-46 |
| MS.gene059597 | MS.gene37910 | 0.825303 | 5.05E-54 | -1.69E-46 |
| MS.gene059609 | MS.gene37910 | 0.800676 | 1.29E-48 | -1.69E-46 |
| MS.gene059674 | MS.gene37910 | 0.824582 | 7.47E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene37910 | 0.816519 | 5.30E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene37910 | 0.811508 | 6.76E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene37910 | 0.805137 | 1.54E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene37910 | 0.817924 | 2.56E-52 | -1.69E-46 |
| MS.gene059807 | MS.gene37910 | 0.884363 | 2.04E-71 | -1.69E-46 |
| MS.gene05984 | MS.gene37910 | 0.827919 | 1.20E-54 | -1.69E-46 |
| MS.gene059876 | MS.gene37910 | 0.827278 | 1.71E-54 | -1.69E-46 |
| MS.gene059894 | MS.gene37910 | 0.821866 | 3.22E-53 | -1.69E-46 |
| MS.gene060247 | MS.gene37910 | 0.837974 | 3.79E-57 | -1.69E-46 |
| MS.gene06037 | MS.gene37910 | 0.849561 | 2.99E-60 | -1.69E-46 |
| MS.gene060495 | MS.gene37910 | 0.89135 | 4.30E-74 | -1.69E-46 |
| MS.gene060496 | MS.gene37910 | 0.801818 | 7.52E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene37910 | 0.807243 | 5.56E-50 | -1.69E-46 |
| MS.gene060927 | MS.gene37910 | 0.822631 | 2.14E-53 | -1.69E-46 |
| MS.gene060943 | MS.gene37910 | 0.806221 | 9.14E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene37910 | 0.864466 | 1.19E-64 | -1.69E-46 |
| MS.gene061051 | MS.gene37910 | -0.836329 | 9.97E-57 | -1.69E-46 |
| MS.gene061154 | MS.gene37910 | 0.806369 | 8.51E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene37910 | 0.837783 | 4.24E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025799 | MS.gene37910 | PPI |
| MS.gene71923 | MS.gene37910 | PPI |
| MS.gene09964 | MS.gene37910 | PPI |
| MS.gene015450 | MS.gene37910 | PPI |
| MS.gene62883 | MS.gene37910 | PPI |
| MS.gene09962 | MS.gene37910 | PPI |
| MS.gene011513 | MS.gene37910 | PPI |
| MS.gene025801 | MS.gene37910 | PPI |
| MS.gene21160 | MS.gene37910 | PPI |
| MS.gene21157 | MS.gene37910 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37910.t1 | MTR_5g085850 | 97.445 | 587 | 15 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1182 |
| MS.gene37910.t1 | MTR_5g012270 | 47.826 | 575 | 273 | 7 | 3 | 556 | 4 | 572 | 0.0 | 555 |
| MS.gene37910.t1 | MTR_5g012290 | 50.526 | 570 | 253 | 7 | 9 | 556 | 8 | 570 | 0.0 | 553 |
| MS.gene37910.t1 | MTR_4g101380 | 51.579 | 570 | 252 | 7 | 9 | 556 | 6 | 573 | 0.0 | 543 |
| MS.gene37910.t1 | MTR_4g114340 | 49.472 | 568 | 268 | 9 | 18 | 571 | 12 | 574 | 1.92e-171 | 499 |
| MS.gene37910.t1 | MTR_7g067010 | 43.486 | 568 | 294 | 6 | 8 | 556 | 2 | 561 | 8.05e-153 | 451 |
| MS.gene37910.t1 | MTR_4g015080 | 42.408 | 573 | 302 | 8 | 7 | 559 | 11 | 575 | 3.40e-150 | 444 |
| MS.gene37910.t1 | MTR_3g112460 | 40.103 | 581 | 314 | 9 | 9 | 569 | 2 | 568 | 1.76e-147 | 437 |
| MS.gene37910.t1 | MTR_3g112470 | 40.275 | 581 | 313 | 9 | 9 | 569 | 2 | 568 | 1.74e-146 | 435 |
| MS.gene37910.t1 | MTR_3g462710 | 42.254 | 568 | 301 | 8 | 9 | 556 | 3 | 563 | 2.12e-146 | 435 |
| MS.gene37910.t1 | MTR_7g098200 | 39.894 | 564 | 312 | 10 | 1 | 550 | 1 | 551 | 1.57e-141 | 423 |
| MS.gene37910.t1 | MTR_7g098200 | 39.229 | 571 | 316 | 9 | 1 | 550 | 1 | 561 | 4.60e-141 | 422 |
| MS.gene37910.t1 | MTR_5g055000 | 38.879 | 571 | 312 | 11 | 28 | 569 | 16 | 578 | 6.37e-139 | 416 |
| MS.gene37910.t1 | MTR_3g112450 | 40.105 | 571 | 318 | 8 | 15 | 569 | 8 | 570 | 1.01e-137 | 412 |
| MS.gene37910.t1 | MTR_7g098040 | 37.349 | 581 | 333 | 9 | 1 | 558 | 2 | 574 | 4.42e-131 | 397 |
| MS.gene37910.t1 | MTR_7g098160 | 37.955 | 577 | 335 | 10 | 1 | 558 | 1 | 573 | 6.42e-130 | 394 |
| MS.gene37910.t1 | MTR_5g038060 | 38.078 | 562 | 328 | 5 | 28 | 569 | 29 | 590 | 3.34e-128 | 389 |
| MS.gene37910.t1 | MTR_7g065080 | 36.425 | 593 | 333 | 11 | 4 | 579 | 6 | 571 | 3.68e-128 | 388 |
| MS.gene37910.t1 | MTR_7g010820 | 37.669 | 592 | 339 | 7 | 7 | 573 | 3 | 589 | 5.34e-128 | 388 |
| MS.gene37910.t1 | MTR_1g075440 | 36.210 | 591 | 339 | 8 | 10 | 579 | 8 | 581 | 1.21e-127 | 387 |
| MS.gene37910.t1 | MTR_7g088825 | 35.644 | 606 | 355 | 10 | 9 | 587 | 3 | 600 | 6.63e-127 | 386 |
| MS.gene37910.t1 | MTR_1g041875 | 38.704 | 540 | 310 | 7 | 12 | 537 | 9 | 541 | 1.54e-126 | 384 |
| MS.gene37910.t1 | MTR_2g005130 | 36.720 | 561 | 338 | 7 | 16 | 569 | 26 | 576 | 2.75e-126 | 384 |
| MS.gene37910.t1 | MTR_7g098090 | 38.225 | 586 | 334 | 11 | 4 | 565 | 4 | 585 | 1.52e-125 | 382 |
| MS.gene37910.t1 | MTR_1g041815 | 39.076 | 563 | 316 | 8 | 15 | 558 | 12 | 566 | 2.41e-125 | 381 |
| MS.gene37910.t1 | MTR_7g006540 | 37.370 | 578 | 320 | 8 | 27 | 567 | 60 | 632 | 3.17e-125 | 382 |
| MS.gene37910.t1 | MTR_7g098180 | 37.331 | 592 | 333 | 10 | 9 | 571 | 6 | 588 | 6.79e-125 | 380 |
| MS.gene37910.t1 | MTR_4g019580 | 36.097 | 579 | 343 | 8 | 7 | 565 | 7 | 578 | 2.41e-124 | 379 |
| MS.gene37910.t1 | MTR_1g042310 | 36.234 | 563 | 333 | 8 | 15 | 558 | 11 | 566 | 4.79e-124 | 378 |
| MS.gene37910.t1 | MTR_7g098220 | 36.905 | 588 | 342 | 8 | 1 | 567 | 1 | 580 | 7.41e-124 | 378 |
| MS.gene37910.t1 | MTR_3g069500 | 37.303 | 571 | 328 | 11 | 16 | 569 | 21 | 578 | 7.61e-124 | 377 |
| MS.gene37910.t1 | MTR_7g098230 | 37.456 | 566 | 322 | 9 | 37 | 578 | 33 | 590 | 1.39e-123 | 377 |
| MS.gene37910.t1 | MTR_8g469480 | 37.030 | 559 | 331 | 6 | 33 | 571 | 41 | 598 | 1.05e-122 | 375 |
| MS.gene37910.t1 | MTR_1g041835 | 38.188 | 563 | 321 | 8 | 15 | 558 | 12 | 566 | 1.71e-122 | 374 |
| MS.gene37910.t1 | MTR_7g088790 | 35.537 | 605 | 359 | 10 | 10 | 587 | 4 | 604 | 1.94e-121 | 372 |
| MS.gene37910.t1 | MTR_1g041885 | 39.479 | 499 | 283 | 5 | 53 | 539 | 5 | 496 | 6.68e-121 | 368 |
| MS.gene37910.t1 | MTR_3g069420 | 37.113 | 582 | 329 | 12 | 7 | 565 | 12 | 579 | 6.89e-121 | 370 |
| MS.gene37910.t1 | MTR_5g014150 | 36.348 | 564 | 333 | 7 | 9 | 550 | 23 | 582 | 2.50e-119 | 366 |
| MS.gene37910.t1 | MTR_4g107670 | 37.258 | 569 | 326 | 7 | 19 | 561 | 13 | 576 | 4.87e-119 | 365 |
| MS.gene37910.t1 | MTR_3g072300 | 35.163 | 583 | 347 | 8 | 10 | 571 | 4 | 576 | 1.03e-118 | 364 |
| MS.gene37910.t1 | MTR_4g098800 | 34.957 | 575 | 355 | 6 | 9 | 567 | 15 | 586 | 5.07e-117 | 360 |
| MS.gene37910.t1 | MTR_7g088820 | 34.549 | 576 | 350 | 8 | 19 | 573 | 16 | 585 | 1.25e-116 | 359 |
| MS.gene37910.t1 | MTR_3g069440 | 36.707 | 583 | 326 | 14 | 16 | 569 | 19 | 587 | 1.61e-116 | 358 |
| MS.gene37910.t1 | MTR_1g042310 | 36.535 | 531 | 311 | 8 | 47 | 558 | 6 | 529 | 2.26e-116 | 357 |
| MS.gene37910.t1 | MTR_4g098800 | 35.017 | 574 | 354 | 6 | 9 | 566 | 80 | 650 | 4.69e-116 | 359 |
| MS.gene37910.t1 | MTR_8g469310 | 37.262 | 577 | 333 | 7 | 9 | 561 | 5 | 576 | 6.42e-116 | 357 |
| MS.gene37910.t1 | MTR_4g107510 | 33.739 | 575 | 343 | 7 | 7 | 556 | 23 | 584 | 1.93e-115 | 356 |
| MS.gene37910.t1 | MTR_1g085090 | 35.179 | 560 | 340 | 8 | 28 | 575 | 17 | 565 | 5.79e-115 | 355 |
| MS.gene37910.t1 | MTR_1g042310 | 36.571 | 525 | 307 | 8 | 53 | 558 | 5 | 522 | 6.65e-115 | 353 |
| MS.gene37910.t1 | MTR_3g462710 | 42.702 | 459 | 236 | 8 | 118 | 556 | 3 | 454 | 1.33e-114 | 349 |
| MS.gene37910.t1 | MTR_7g098220 | 37.454 | 542 | 310 | 8 | 47 | 567 | 3 | 536 | 1.35e-113 | 350 |
| MS.gene37910.t1 | MTR_7g065080 | 37.059 | 510 | 278 | 10 | 87 | 579 | 1 | 484 | 1.60e-112 | 345 |
| MS.gene37910.t1 | MTR_5g038380 | 37.671 | 584 | 308 | 8 | 19 | 564 | 17 | 582 | 3.00e-112 | 347 |
| MS.gene37910.t1 | MTR_8g469470 | 34.790 | 572 | 348 | 6 | 9 | 556 | 11 | 581 | 4.06e-112 | 347 |
| MS.gene37910.t1 | MTR_7g005930 | 33.682 | 573 | 357 | 8 | 13 | 571 | 18 | 581 | 1.81e-111 | 345 |
| MS.gene37910.t1 | MTR_4g107580 | 33.277 | 595 | 351 | 9 | 9 | 573 | 12 | 590 | 8.83e-111 | 344 |
| MS.gene37910.t1 | MTR_3g005010 | 36.852 | 559 | 304 | 10 | 16 | 556 | 16 | 543 | 5.62e-110 | 340 |
| MS.gene37910.t1 | MTR_1g116930 | 34.458 | 563 | 351 | 8 | 26 | 575 | 19 | 576 | 6.44e-110 | 341 |
| MS.gene37910.t1 | MTR_2g017750 | 34.642 | 586 | 352 | 10 | 15 | 571 | 19 | 602 | 2.34e-109 | 340 |
| MS.gene37910.t1 | MTR_3g100980 | 33.570 | 563 | 349 | 7 | 24 | 569 | 10 | 564 | 2.36e-108 | 337 |
| MS.gene37910.t1 | MTR_7g111260 | 35.636 | 550 | 323 | 10 | 28 | 561 | 17 | 551 | 3.65e-108 | 337 |
| MS.gene37910.t1 | MTR_4g107530 | 32.715 | 593 | 369 | 9 | 6 | 571 | 7 | 596 | 5.52e-108 | 337 |
| MS.gene37910.t1 | MTR_0294s0020 | 36.898 | 561 | 306 | 11 | 16 | 556 | 17 | 549 | 5.67e-108 | 335 |
| MS.gene37910.t1 | MTR_7g088820 | 35.182 | 523 | 314 | 7 | 72 | 573 | 5 | 523 | 6.01e-108 | 334 |
| MS.gene37910.t1 | MTR_7g098200 | 38.596 | 456 | 250 | 8 | 116 | 550 | 1 | 447 | 1.83e-107 | 332 |
| MS.gene37910.t1 | MTR_8g087810 | 34.530 | 585 | 345 | 10 | 16 | 567 | 7 | 586 | 1.11e-106 | 333 |
| MS.gene37910.t1 | MTR_4g033325 | 36.022 | 558 | 315 | 10 | 16 | 556 | 17 | 549 | 1.20e-106 | 332 |
| MS.gene37910.t1 | MTR_5g038190 | 33.100 | 571 | 358 | 7 | 6 | 556 | 2 | 568 | 4.91e-105 | 328 |
| MS.gene37910.t1 | MTR_4g033315 | 35.599 | 559 | 318 | 10 | 16 | 556 | 17 | 551 | 1.79e-104 | 326 |
| MS.gene37910.t1 | MTR_4g033310 | 35.599 | 559 | 318 | 10 | 16 | 556 | 17 | 551 | 1.79e-104 | 326 |
| MS.gene37910.t1 | MTR_3g014790 | 35.214 | 585 | 313 | 11 | 14 | 564 | 3 | 555 | 4.08e-104 | 325 |
| MS.gene37910.t1 | MTR_7g013270 | 33.630 | 562 | 348 | 9 | 23 | 568 | 83 | 635 | 4.49e-103 | 325 |
| MS.gene37910.t1 | MTR_3g100980 | 31.980 | 591 | 349 | 8 | 24 | 569 | 10 | 592 | 6.48e-103 | 323 |
| MS.gene37910.t1 | MTR_4g011280 | 32.570 | 568 | 349 | 12 | 32 | 576 | 34 | 590 | 2.34e-102 | 322 |
| MS.gene37910.t1 | MTR_4g033330 | 36.852 | 540 | 301 | 9 | 16 | 538 | 17 | 533 | 6.13e-102 | 319 |
| MS.gene37910.t1 | MTR_8g103233 | 34.091 | 572 | 352 | 8 | 28 | 580 | 15 | 580 | 8.95e-102 | 320 |
| MS.gene37910.t1 | MTR_8g038880 | 34.014 | 588 | 320 | 13 | 29 | 582 | 19 | 572 | 1.08e-101 | 320 |
| MS.gene37910.t1 | MTR_8g087780 | 33.793 | 580 | 355 | 9 | 16 | 567 | 7 | 585 | 2.13e-100 | 317 |
| MS.gene37910.t1 | MTR_7g088820 | 35.924 | 476 | 280 | 7 | 119 | 573 | 4 | 475 | 1.40e-99 | 311 |
| MS.gene37910.t1 | MTR_7g098150 | 39.013 | 446 | 260 | 7 | 1 | 438 | 1 | 442 | 7.56e-99 | 310 |
| MS.gene37910.t1 | MTR_4g033375 | 35.800 | 500 | 288 | 7 | 16 | 503 | 18 | 496 | 8.02e-97 | 305 |
| MS.gene37910.t1 | MTR_2g101590 | 33.097 | 565 | 350 | 10 | 28 | 570 | 24 | 582 | 9.52e-95 | 303 |
| MS.gene37910.t1 | MTR_2g101650 | 30.662 | 574 | 364 | 11 | 24 | 574 | 18 | 580 | 1.15e-94 | 302 |
| MS.gene37910.t1 | MTR_4g033395 | 36.327 | 501 | 284 | 9 | 16 | 503 | 18 | 496 | 1.83e-94 | 298 |
| MS.gene37910.t1 | MTR_4g107610 | 33.457 | 541 | 339 | 9 | 24 | 546 | 25 | 562 | 1.31e-92 | 297 |
| MS.gene37910.t1 | MTR_4g123537 | 34.759 | 561 | 333 | 9 | 14 | 556 | 25 | 570 | 2.67e-91 | 293 |
| MS.gene37910.t1 | MTR_2g101610 | 32.799 | 561 | 349 | 10 | 32 | 570 | 29 | 583 | 8.12e-91 | 293 |
| MS.gene37910.t1 | MTR_2g101640 | 30.742 | 566 | 364 | 10 | 28 | 571 | 21 | 580 | 1.49e-90 | 292 |
| MS.gene37910.t1 | MTR_7g064780 | 31.597 | 576 | 366 | 10 | 20 | 571 | 16 | 587 | 6.56e-90 | 289 |
| MS.gene37910.t1 | MTR_1g009200 | 33.517 | 543 | 333 | 10 | 28 | 549 | 25 | 560 | 4.38e-88 | 285 |
| MS.gene37910.t1 | MTR_1g026740 | 31.204 | 548 | 344 | 11 | 26 | 550 | 13 | 550 | 4.92e-88 | 284 |
| MS.gene37910.t1 | MTR_7g064800 | 32.804 | 567 | 352 | 10 | 9 | 550 | 4 | 566 | 9.10e-85 | 276 |
| MS.gene37910.t1 | MTR_1g057460 | 30.331 | 544 | 352 | 10 | 28 | 559 | 42 | 570 | 5.49e-84 | 273 |
| MS.gene37910.t1 | MTR_1g026750 | 31.383 | 564 | 353 | 11 | 28 | 567 | 16 | 569 | 1.44e-83 | 272 |
| MS.gene37910.t1 | MTR_1g026770 | 32.103 | 542 | 340 | 9 | 32 | 553 | 17 | 550 | 6.53e-83 | 270 |
| MS.gene37910.t1 | MTR_1g057460 | 30.739 | 514 | 329 | 10 | 58 | 559 | 1 | 499 | 4.40e-81 | 263 |
| MS.gene37910.t1 | MTR_7g052600 | 33.932 | 557 | 321 | 13 | 9 | 553 | 4 | 525 | 7.13e-80 | 261 |
| MS.gene37910.t1 | MTR_2g101560 | 31.794 | 563 | 355 | 11 | 32 | 571 | 29 | 585 | 9.53e-80 | 264 |
| MS.gene37910.t1 | MTR_2g093160 | 30.056 | 539 | 355 | 11 | 29 | 556 | 20 | 547 | 2.13e-79 | 260 |
| MS.gene37910.t1 | MTR_4g033325 | 34.490 | 461 | 260 | 10 | 113 | 556 | 16 | 451 | 3.64e-79 | 257 |
| MS.gene37910.t1 | MTR_0236s0050 | 31.712 | 514 | 324 | 10 | 58 | 559 | 1 | 499 | 3.95e-79 | 258 |
| MS.gene37910.t1 | MTR_4g033385 | 34.858 | 459 | 260 | 10 | 115 | 556 | 16 | 452 | 4.83e-78 | 254 |
| MS.gene37910.t1 | MTR_4g033325 | 34.813 | 428 | 251 | 8 | 146 | 556 | 9 | 425 | 6.81e-77 | 250 |
| MS.gene37910.t1 | MTR_2g093180 | 30.314 | 541 | 352 | 11 | 29 | 556 | 20 | 548 | 8.63e-77 | 254 |
| MS.gene37910.t1 | MTR_7g051880 | 33.153 | 555 | 328 | 13 | 9 | 553 | 4 | 525 | 1.22e-74 | 247 |
| MS.gene37910.t1 | MTR_7g051830 | 32.793 | 555 | 330 | 12 | 9 | 553 | 4 | 525 | 1.12e-73 | 245 |
| MS.gene37910.t1 | MTR_2g093640 | 28.361 | 543 | 365 | 9 | 26 | 556 | 17 | 547 | 2.18e-73 | 244 |
| MS.gene37910.t1 | MTR_4g024930 | 31.010 | 574 | 319 | 14 | 16 | 554 | 22 | 553 | 2.93e-73 | 245 |
| MS.gene37910.t1 | MTR_7g098210 | 30.829 | 519 | 251 | 12 | 53 | 550 | 5 | 436 | 4.94e-68 | 228 |
| MS.gene37910.t1 | MTR_6g008690 | 29.220 | 551 | 326 | 13 | 47 | 566 | 24 | 541 | 1.69e-64 | 221 |
| MS.gene37910.t1 | MTR_4g033310 | 34.657 | 277 | 161 | 4 | 293 | 556 | 218 | 487 | 2.34e-50 | 181 |
| MS.gene37910.t1 | MTR_4g033310 | 40.000 | 185 | 97 | 2 | 16 | 200 | 17 | 187 | 2.77e-31 | 127 |
| MS.gene37910.t1 | MTR_1g009170 | 28.645 | 391 | 222 | 8 | 161 | 536 | 10 | 358 | 1.92e-40 | 151 |
| MS.gene37910.t1 | MTR_3g065350 | 40.123 | 162 | 96 | 1 | 336 | 496 | 1 | 162 | 6.22e-34 | 127 |
| MS.gene37910.t1 | MTR_4g033390 | 32.979 | 94 | 59 | 1 | 475 | 564 | 30 | 123 | 5.29e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37910.t1 | AT3G21670 | 70.681 | 573 | 161 | 3 | 5 | 572 | 6 | 576 | 0.0 | 808 |
| MS.gene37910.t1 | AT1G12110 | 48.862 | 571 | 269 | 6 | 18 | 567 | 15 | 583 | 0.0 | 540 |
| MS.gene37910.t1 | AT2G26690 | 50.264 | 569 | 255 | 9 | 18 | 571 | 12 | 567 | 0.0 | 526 |
| MS.gene37910.t1 | AT2G26690 | 49.358 | 545 | 248 | 9 | 42 | 571 | 3 | 534 | 3.66e-167 | 487 |
| MS.gene37910.t1 | AT2G26690 | 49.533 | 535 | 242 | 9 | 52 | 571 | 1 | 522 | 7.43e-164 | 478 |
| MS.gene37910.t1 | AT3G54140 | 42.328 | 567 | 302 | 6 | 9 | 556 | 3 | 563 | 3.60e-158 | 465 |
| MS.gene37910.t1 | AT3G54140 | 42.328 | 567 | 302 | 6 | 9 | 556 | 3 | 563 | 3.60e-158 | 465 |
| MS.gene37910.t1 | AT2G02040 | 41.093 | 567 | 310 | 5 | 9 | 556 | 20 | 581 | 2.28e-149 | 443 |
| MS.gene37910.t1 | AT5G01180 | 40.564 | 567 | 311 | 7 | 9 | 556 | 4 | 563 | 9.16e-145 | 431 |
| MS.gene37910.t1 | AT5G01180 | 40.564 | 567 | 311 | 7 | 9 | 556 | 4 | 563 | 9.16e-145 | 431 |
| MS.gene37910.t1 | AT5G01180 | 40.564 | 567 | 311 | 7 | 9 | 556 | 4 | 563 | 9.16e-145 | 431 |
| MS.gene37910.t1 | AT1G62200 | 39.892 | 554 | 318 | 4 | 15 | 556 | 37 | 587 | 2.37e-143 | 427 |
| MS.gene37910.t1 | AT1G62200 | 38.079 | 583 | 317 | 5 | 15 | 556 | 37 | 616 | 2.34e-137 | 413 |
| MS.gene37910.t1 | AT1G62200 | 38.079 | 583 | 317 | 5 | 15 | 556 | 51 | 630 | 4.41e-137 | 413 |
| MS.gene37910.t1 | AT1G59740 | 38.462 | 572 | 330 | 7 | 6 | 561 | 17 | 582 | 2.49e-134 | 404 |
| MS.gene37910.t1 | AT1G68570 | 39.896 | 579 | 319 | 11 | 24 | 577 | 17 | 591 | 3.21e-127 | 386 |
| MS.gene37910.t1 | AT5G46050 | 40.111 | 541 | 295 | 8 | 16 | 536 | 13 | 544 | 1.10e-126 | 384 |
| MS.gene37910.t1 | AT1G68570 | 40.463 | 561 | 305 | 11 | 42 | 577 | 5 | 561 | 1.39e-125 | 381 |
| MS.gene37910.t1 | AT2G02020 | 37.590 | 556 | 304 | 7 | 9 | 555 | 21 | 542 | 3.32e-125 | 379 |
| MS.gene37910.t1 | AT3G53960 | 35.826 | 575 | 341 | 9 | 16 | 569 | 23 | 590 | 6.96e-124 | 378 |
| MS.gene37910.t1 | AT2G37900 | 35.179 | 560 | 344 | 6 | 7 | 556 | 16 | 566 | 1.10e-122 | 374 |
| MS.gene37910.t1 | AT1G33440 | 36.632 | 576 | 336 | 9 | 15 | 569 | 23 | 590 | 1.74e-120 | 369 |
| MS.gene37910.t1 | AT5G13400 | 35.590 | 576 | 335 | 8 | 19 | 567 | 52 | 618 | 1.56e-117 | 362 |
| MS.gene37910.t1 | AT1G32450 | 35.739 | 568 | 336 | 8 | 9 | 550 | 14 | 578 | 9.61e-117 | 360 |
| MS.gene37910.t1 | AT5G46040 | 37.500 | 576 | 328 | 10 | 16 | 571 | 13 | 576 | 3.54e-116 | 357 |
| MS.gene37910.t1 | AT1G27040 | 36.643 | 554 | 323 | 6 | 20 | 555 | 13 | 556 | 8.65e-115 | 353 |
| MS.gene37910.t1 | AT1G27040 | 36.643 | 554 | 323 | 6 | 20 | 555 | 17 | 560 | 1.09e-114 | 353 |
| MS.gene37910.t1 | AT1G69850 | 36.678 | 578 | 312 | 8 | 20 | 556 | 15 | 579 | 1.65e-114 | 353 |
| MS.gene37910.t1 | AT1G69870 | 35.273 | 567 | 339 | 8 | 28 | 569 | 49 | 612 | 1.10e-113 | 352 |
| MS.gene37910.t1 | AT3G54450 | 34.729 | 573 | 319 | 11 | 27 | 571 | 9 | 554 | 3.09e-113 | 349 |
| MS.gene37910.t1 | AT4G21680 | 37.345 | 565 | 325 | 8 | 15 | 555 | 13 | 572 | 6.15e-113 | 349 |
| MS.gene37910.t1 | AT2G37900 | 36.122 | 490 | 295 | 5 | 77 | 556 | 6 | 487 | 1.33e-110 | 340 |
| MS.gene37910.t1 | AT2G40460 | 36.364 | 572 | 323 | 10 | 15 | 563 | 9 | 562 | 1.53e-110 | 343 |
| MS.gene37910.t1 | AT1G18880 | 35.540 | 574 | 335 | 9 | 9 | 556 | 2 | 566 | 4.98e-110 | 342 |
| MS.gene37910.t1 | AT1G72140 | 35.536 | 560 | 311 | 11 | 18 | 556 | 22 | 552 | 4.43e-109 | 338 |
| MS.gene37910.t1 | AT5G62680 | 34.215 | 567 | 343 | 8 | 33 | 571 | 46 | 610 | 1.38e-108 | 339 |
| MS.gene37910.t1 | AT1G27040 | 36.194 | 536 | 306 | 6 | 42 | 555 | 7 | 528 | 1.57e-108 | 336 |
| MS.gene37910.t1 | AT2G02020 | 34.532 | 556 | 300 | 7 | 9 | 555 | 21 | 521 | 1.93e-106 | 330 |
| MS.gene37910.t1 | AT5G19640 | 34.495 | 545 | 325 | 10 | 31 | 560 | 60 | 587 | 3.35e-103 | 325 |
| MS.gene37910.t1 | AT1G22540 | 36.151 | 556 | 315 | 11 | 19 | 556 | 19 | 552 | 8.96e-102 | 319 |
| MS.gene37910.t1 | AT5G46050 | 40.590 | 441 | 233 | 8 | 116 | 536 | 1 | 432 | 9.40e-102 | 317 |
| MS.gene37910.t1 | AT3G16180 | 33.506 | 579 | 356 | 10 | 24 | 576 | 16 | 591 | 1.33e-101 | 320 |
| MS.gene37910.t1 | AT1G22550 | 35.490 | 572 | 326 | 13 | 9 | 556 | 7 | 559 | 2.69e-101 | 318 |
| MS.gene37910.t1 | AT3G47960 | 33.880 | 549 | 334 | 7 | 33 | 556 | 64 | 608 | 7.12e-101 | 319 |
| MS.gene37910.t1 | AT1G72130 | 33.800 | 571 | 325 | 10 | 1 | 556 | 1 | 533 | 1.07e-100 | 316 |
| MS.gene37910.t1 | AT1G52190 | 31.833 | 600 | 374 | 10 | 15 | 586 | 7 | 599 | 1.10e-100 | 318 |
| MS.gene37910.t1 | AT1G27080 | 35.651 | 561 | 337 | 11 | 28 | 573 | 12 | 563 | 4.73e-100 | 315 |
| MS.gene37910.t1 | AT5G62730 | 34.039 | 567 | 325 | 9 | 16 | 556 | 42 | 585 | 2.07e-99 | 314 |
| MS.gene37910.t1 | AT1G22570 | 35.912 | 543 | 312 | 12 | 13 | 534 | 11 | 538 | 3.61e-99 | 313 |
| MS.gene37910.t1 | AT1G72120 | 35.727 | 557 | 319 | 10 | 18 | 556 | 17 | 552 | 1.17e-97 | 308 |
| MS.gene37910.t1 | AT1G72125 | 34.526 | 559 | 327 | 12 | 18 | 556 | 17 | 556 | 1.84e-95 | 303 |
| MS.gene37910.t1 | AT5G62730 | 33.759 | 548 | 314 | 9 | 35 | 556 | 2 | 526 | 1.60e-93 | 297 |
| MS.gene37910.t1 | AT3G25260 | 32.714 | 538 | 325 | 8 | 20 | 553 | 11 | 515 | 4.13e-92 | 293 |
| MS.gene37910.t1 | AT1G27080 | 35.417 | 528 | 317 | 11 | 61 | 573 | 3 | 521 | 4.60e-91 | 291 |
| MS.gene37910.t1 | AT1G22570 | 35.146 | 515 | 300 | 11 | 39 | 534 | 2 | 501 | 2.57e-89 | 286 |
| MS.gene37910.t1 | AT3G25280 | 33.640 | 544 | 318 | 11 | 20 | 553 | 11 | 521 | 3.77e-89 | 285 |
| MS.gene37910.t1 | AT1G69860 | 33.700 | 546 | 341 | 8 | 28 | 560 | 16 | 553 | 2.49e-88 | 284 |
| MS.gene37910.t1 | AT3G45710 | 31.022 | 548 | 351 | 11 | 30 | 567 | 21 | 551 | 5.55e-87 | 281 |
| MS.gene37910.t1 | AT3G45680 | 29.840 | 563 | 371 | 11 | 13 | 566 | 5 | 552 | 1.57e-86 | 280 |
| MS.gene37910.t1 | AT5G28470 | 29.853 | 546 | 364 | 7 | 24 | 553 | 11 | 553 | 2.73e-85 | 276 |
| MS.gene37910.t1 | AT3G45650 | 29.078 | 564 | 373 | 9 | 13 | 567 | 5 | 550 | 4.02e-85 | 276 |
| MS.gene37910.t1 | AT3G45720 | 29.570 | 558 | 371 | 10 | 20 | 568 | 9 | 553 | 3.53e-83 | 271 |
| MS.gene37910.t1 | AT3G45700 | 30.853 | 551 | 352 | 13 | 29 | 572 | 15 | 543 | 5.07e-83 | 270 |
| MS.gene37910.t1 | AT5G28470 | 29.670 | 546 | 363 | 8 | 24 | 553 | 11 | 551 | 2.74e-82 | 268 |
| MS.gene37910.t1 | AT3G45660 | 29.562 | 548 | 357 | 10 | 30 | 567 | 21 | 549 | 1.03e-80 | 264 |
| MS.gene37910.t1 | AT3G45660 | 29.562 | 548 | 357 | 10 | 30 | 567 | 21 | 549 | 1.03e-80 | 264 |
| MS.gene37910.t1 | AT3G45660 | 29.562 | 548 | 357 | 10 | 30 | 567 | 42 | 570 | 1.72e-80 | 264 |
| MS.gene37910.t1 | AT3G45650 | 27.966 | 590 | 372 | 10 | 13 | 567 | 5 | 576 | 2.55e-80 | 264 |
| MS.gene37910.t1 | AT1G72130 | 33.875 | 431 | 250 | 8 | 141 | 556 | 5 | 415 | 2.79e-76 | 248 |
| MS.gene37910.t1 | AT1G72130 | 33.875 | 431 | 250 | 8 | 141 | 556 | 5 | 415 | 2.79e-76 | 248 |
| MS.gene37910.t1 | AT5G14940 | 28.467 | 548 | 342 | 12 | 47 | 566 | 24 | 549 | 2.26e-72 | 242 |
| MS.gene37910.t1 | AT3G45690 | 28.597 | 549 | 331 | 14 | 29 | 571 | 17 | 510 | 2.36e-68 | 230 |
| MS.gene37910.t1 | AT3G01350 | 27.911 | 541 | 332 | 12 | 47 | 549 | 24 | 544 | 2.10e-60 | 210 |
| MS.gene37910.t1 | AT5G11570 | 27.626 | 514 | 302 | 9 | 39 | 547 | 22 | 470 | 4.12e-57 | 199 |
| MS.gene37910.t1 | AT2G38100 | 26.602 | 515 | 327 | 14 | 58 | 553 | 2 | 484 | 5.65e-41 | 155 |
| MS.gene37910.t1 | AT2G38100 | 26.602 | 515 | 327 | 14 | 58 | 553 | 18 | 500 | 1.06e-40 | 155 |
| MS.gene37910.t1 | AT2G38100 | 26.602 | 515 | 327 | 14 | 58 | 553 | 24 | 506 | 1.87e-40 | 154 |
Find 105 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAACTTGCTTGGCCTTCT+TGG | 0.112136 | 5.3:+69453113 | MS.gene37910:CDS |
| TACCATAGTTACCAACTTTA+TGG | 0.128785 | 5.3:+69453085 | MS.gene37910:CDS |
| GAAGTCCTTTAACTATTATT+TGG | 0.187229 | 5.3:+69454025 | MS.gene37910:CDS |
| TATTGGTTGCTAGCAGTTCT+TGG | 0.240252 | 5.3:+69455694 | MS.gene37910:CDS |
| ACCCTCCAAATAATAGTTAA+AGG | 0.242437 | 5.3:-69454030 | None:intergenic |
| GTAGGAAGAGGTTGGGGATA+TGG | 0.242746 | 5.3:+69453922 | MS.gene37910:CDS |
| CAATACAACCACTGAAAATA+AGG | 0.259078 | 5.3:-69453881 | None:intergenic |
| AAATCCAATGTGTCAGGATT+TGG | 0.274378 | 5.3:+69453769 | MS.gene37910:CDS |
| GGTCAACATGCATACTCTTT+TGG | 0.280969 | 5.3:+69455119 | MS.gene37910:CDS |
| GCACTTTATACAATAGCTTT+AGG | 0.298363 | 5.3:+69453733 | MS.gene37910:CDS |
| TCAAGTTGAGGAAGTTAAAA+TGG | 0.307630 | 5.3:+69455075 | MS.gene37910:CDS |
| TTGGATCATTTGTGTCAAAT+TGG | 0.313056 | 5.3:-69453798 | None:intergenic |
| CTAGCAGCAGGACTAATCTT+AGG | 0.325151 | 5.3:+69452881 | MS.gene37910:CDS |
| TCACATATACAGACAAATTC+AGG | 0.344673 | 5.3:+69454133 | MS.gene37910:CDS |
| TGTAGCTATGGTTGCAGATA+TGG | 0.350170 | 5.3:-69453180 | None:intergenic |
| CAAGTATGTCACTAAGTTCA+TGG | 0.354511 | 5.3:-69453027 | None:intergenic |
| ACCATAGTTACCAACTTTAT+GGG | 0.356405 | 5.3:+69453086 | MS.gene37910:CDS |
| TCCCATAAAGTTGGTAACTA+TGG | 0.388879 | 5.3:-69453087 | None:intergenic |
| GAGTATGCATGTTGACCAAA+TGG | 0.390833 | 5.3:-69455113 | None:intergenic |
| GTAAGTTAGACTACTTCTAT+TGG | 0.406296 | 5.3:+69455677 | MS.gene37910:CDS |
| TAATCAAACTCCTTCCCATT+TGG | 0.408088 | 5.3:+69455098 | MS.gene37910:CDS |
| GAGGTCAAAATTGGTGTTGA+TGG | 0.410872 | 5.3:+69455829 | MS.gene37910:CDS |
| AACTTGCTTGGCCTTCTTGG+TGG | 0.427150 | 5.3:+69453116 | MS.gene37910:CDS |
| AGACAATGTAGGAAGAGGTT+GGG | 0.428903 | 5.3:+69453915 | MS.gene37910:CDS |
| ATGGGAACTCTCAACTTGCT+TGG | 0.432571 | 5.3:+69453104 | MS.gene37910:CDS |
| AGTCTTCAAAGGGTAGGAAT+TGG | 0.433015 | 5.3:+69455337 | MS.gene37910:CDS |
| TAGCTTATTGGTTTCAATTG+TGG | 0.435213 | 5.3:+69455609 | MS.gene37910:CDS |
| CATGAACTTAGTGACATACT+TGG | 0.438629 | 5.3:+69453028 | MS.gene37910:CDS |
| CCTTTGAGTTTGTTTCATCT+AGG | 0.443818 | 5.3:-69455012 | None:intergenic |
| GGAATAAAATCCAATGTGTC+AGG | 0.449338 | 5.3:+69453763 | MS.gene37910:CDS |
| CTCATAGATTTCATCCTCTC+AGG | 0.449651 | 5.3:-69455541 | None:intergenic |
| ATTGTGAATGAGGTCAAAAT+TGG | 0.459563 | 5.3:+69455820 | MS.gene37910:CDS |
| TTTCTATGTACACTTTCAAT+GGG | 0.473347 | 5.3:+69455574 | MS.gene37910:CDS |
| TTTCTAGCTGATGCAAAACT+TGG | 0.477374 | 5.3:+69453140 | MS.gene37910:CDS |
| GTCCTTTAACTATTATTTGG+AGG | 0.477749 | 5.3:+69454028 | MS.gene37910:CDS |
| CACTTGCTTGAATGCACTGA+TGG | 0.481321 | 5.3:-69453684 | None:intergenic |
| TAGGTTCTTGTTGCAAGTAA+TGG | 0.481920 | 5.3:+69452779 | MS.gene37910:intron |
| AAGGTAGGATCAGAAGGGAT+AGG | 0.490235 | 5.3:-69454084 | None:intergenic |
| TGGGGATATGGAATTTCAGC+AGG | 0.493923 | 5.3:+69453934 | MS.gene37910:CDS |
| TCTGATCCTACCTTACTCAA+TGG | 0.497892 | 5.3:+69454093 | MS.gene37910:CDS |
| TTCAAGATAACCATTGAGTA+AGG | 0.498836 | 5.3:-69454103 | None:intergenic |
| AACTTAGTGACATACTTGGT+TGG | 0.500262 | 5.3:+69453032 | MS.gene37910:CDS |
| ACATTCATGAACAGAAAAGT+TGG | 0.504425 | 5.3:+69455184 | MS.gene37910:CDS |
| GATGATGAGAAAAGCTGATA+AGG | 0.506299 | 5.3:-69455230 | None:intergenic |
| CTTACTTCACTGCATGGAGG+AGG | 0.506716 | 5.3:-69453652 | None:intergenic |
| TCCTTTAACTATTATTTGGA+GGG | 0.510757 | 5.3:+69454029 | MS.gene37910:CDS |
| TATACAATAGCTTTAGGTGG+TGG | 0.514951 | 5.3:+69453739 | MS.gene37910:CDS |
| GTTGAGAGTTCCCATAAAGT+TGG | 0.518445 | 5.3:-69453096 | None:intergenic |
| TTGAGTAAGGTAGGATCAGA+AGG | 0.518588 | 5.3:-69454090 | None:intergenic |
| AAAGCTGATAAGGATCCTGC+TGG | 0.518733 | 5.3:-69455220 | None:intergenic |
| AGGATGAAATCTATGAGTAC+TGG | 0.519350 | 5.3:+69455547 | MS.gene37910:CDS |
| CAAAATTGGTGTTGATGGAA+AGG | 0.520803 | 5.3:+69455834 | MS.gene37910:CDS |
| GTTTATGTTCAAGACAATGT+AGG | 0.523353 | 5.3:+69453904 | MS.gene37910:CDS |
| TGAAGACTTGTGAGTCCTTG+AGG | 0.526978 | 5.3:-69455322 | None:intergenic |
| ACAAAGTAAGCAAGAAAAGA+TGG | 0.527615 | 5.3:+69455632 | MS.gene37910:CDS |
| TGTCTTCTTACTTCACTGCA+TGG | 0.527871 | 5.3:-69453658 | None:intergenic |
| ACAATAGCTTTAGGTGGTGG+AGG | 0.528481 | 5.3:+69453742 | MS.gene37910:CDS |
| GTTCAAGACAATGTAGGAAG+AGG | 0.528760 | 5.3:+69453910 | MS.gene37910:CDS |
| AAGACAATGTAGGAAGAGGT+TGG | 0.532441 | 5.3:+69453914 | MS.gene37910:CDS |
| AAGGACTCACAAGTCTTCAA+AGG | 0.534367 | 5.3:+69455326 | MS.gene37910:CDS |
| CAATGGTTATCTTGAAGCTA+AGG | 0.534910 | 5.3:+69454110 | MS.gene37910:CDS |
| CATGGAGGAGGTGTCATGCT+AGG | 0.540523 | 5.3:-69453640 | None:intergenic |
| GACAATGTAGGAAGAGGTTG+GGG | 0.549581 | 5.3:+69453916 | MS.gene37910:CDS |
| TAGGGAAGTAAAGAGGAGAA+TGG | 0.551633 | 5.3:-69455254 | None:intergenic |
| ACTGGAGGATGGCTAGCAGC+AGG | 0.553684 | 5.3:+69452869 | MS.gene37910:CDS |
| TCTCATTTAGGGAAGTAAAG+AGG | 0.554210 | 5.3:-69455261 | None:intergenic |
| AGTATGCATGTTGACCAAAT+GGG | 0.557444 | 5.3:-69455112 | None:intergenic |
| TTCAACAATGACTCAAGTTG+AGG | 0.561755 | 5.3:+69455063 | MS.gene37910:CDS |
| CTATCGTTGAGAAAGAAAGA+AGG | 0.562368 | 5.3:+69455395 | MS.gene37910:CDS |
| CTAGGATTGCTGCTTTGTCA+AGG | 0.562473 | 5.3:-69454994 | None:intergenic |
| TGGTAGCAGAGCTAGCTGAA+TGG | 0.566779 | 5.3:-69453067 | None:intergenic |
| AGGACTCACAAGTCTTCAAA+GGG | 0.568729 | 5.3:+69455327 | MS.gene37910:CDS |
| AGATAACCATTGAGTAAGGT+AGG | 0.570016 | 5.3:-69454099 | None:intergenic |
| GGGACAATGTTGGTAGCAGT+TGG | 0.571832 | 5.3:+69453955 | MS.gene37910:CDS |
| TGCTGAAAGAATATGTGTCA+TGG | 0.579113 | 5.3:+69452998 | MS.gene37910:CDS |
| TATAGATTCAAGAAACCTCA+AGG | 0.587404 | 5.3:+69454003 | MS.gene37910:CDS |
| AGAGCTTGTGATTGTGAATG+AGG | 0.594794 | 5.3:+69455810 | MS.gene37910:CDS |
| GCTGAAAGAATATGTGTCAT+GGG | 0.598170 | 5.3:+69452999 | MS.gene37910:CDS |
| CAGCTAGAAAACCACCAAGA+AGG | 0.599258 | 5.3:-69453127 | None:intergenic |
| GGGTGTGTGTATGTTAACTT+TGG | 0.601232 | 5.3:+69453606 | MS.gene37910:intron |
| AGATCCAAATCCTGACACAT+TGG | 0.605857 | 5.3:-69453773 | None:intergenic |
| CATCAGTGCATTCAAGCAAG+TGG | 0.606733 | 5.3:+69453685 | MS.gene37910:CDS |
| GGTTTCTTGAATCTATACAA+TGG | 0.607400 | 5.3:-69453997 | None:intergenic |
| AATTTCAGCAGGGACAATGT+TGG | 0.609240 | 5.3:+69453945 | MS.gene37910:CDS |
| CTTCTTACTTCACTGCATGG+AGG | 0.613511 | 5.3:-69453655 | None:intergenic |
| CTTTATACAATAGCTTTAGG+TGG | 0.613828 | 5.3:+69453736 | MS.gene37910:CDS |
| GTCATTGTTGAAACTAACCA+TGG | 0.615360 | 5.3:-69455052 | None:intergenic |
| ACGGAAACAACGAAAATCCA+TGG | 0.615614 | 5.3:+69455035 | MS.gene37910:CDS |
| CCTAGATGAAACAAACTCAA+AGG | 0.617218 | 5.3:+69455012 | MS.gene37910:CDS |
| GATGAAACAAACTCAAAGGA+CGG | 0.619454 | 5.3:+69455016 | MS.gene37910:CDS |
| ATTTGACACAAATGATCCAA+AGG | 0.621651 | 5.3:+69453801 | MS.gene37910:CDS |
| GGATCACTAGAGATTCCAGC+AGG | 0.623448 | 5.3:+69455205 | MS.gene37910:CDS |
| AAAATCACTCACAATCCTCA+AGG | 0.633571 | 5.3:+69455307 | MS.gene37910:CDS |
| TATCGTTGAGAAAGAAAGAA+GGG | 0.638376 | 5.3:+69455396 | MS.gene37910:CDS |
| TGCATGTTGACCAAATGGGA+AGG | 0.645769 | 5.3:-69455108 | None:intergenic |
| ATCTGCAACCATAGCTACAG+TGG | 0.647691 | 5.3:+69453184 | MS.gene37910:CDS |
| CTCACAAGTCTTCAAAGGGT+AGG | 0.662620 | 5.3:+69455331 | MS.gene37910:CDS |
| TGAGTAAGGTAGGATCAGAA+GGG | 0.672680 | 5.3:-69454089 | None:intergenic |
| ATAGTTAAAGGACTTCCTTG+AGG | 0.673498 | 5.3:-69454018 | None:intergenic |
| TTGAAGAGTAATCTTGACAA+GGG | 0.673892 | 5.3:+69455655 | MS.gene37910:CDS |
| TCATAAGGGAAGCACCTGAG+AGG | 0.674202 | 5.3:+69455527 | MS.gene37910:CDS |
| GTTGAAGAGTAATCTTGACA+AGG | 0.676705 | 5.3:+69455654 | MS.gene37910:CDS |
| TGTAGCTTGCTCAATTGTGA+AGG | 0.695807 | 5.3:-69455164 | None:intergenic |
| GGGGATATGGAATTTCAGCA+GGG | 0.706056 | 5.3:+69453935 | MS.gene37910:CDS |
| AGGCATAGAAGACAATGCTG+CGG | 0.722065 | 5.3:+69452811 | MS.gene37910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTTTATAAACTACTA+TGG | + | chr5.3:69453225-69453244 | MS.gene37910:intron | 10.0% |
| !! | ATGTTTATTACTATTTATTG+GGG | + | chr5.3:69454274-69454293 | MS.gene37910:intron | 15.0% |
| !! | CATGTTTATTACTATTTATT+GGG | + | chr5.3:69454273-69454292 | MS.gene37910:intron | 15.0% |
| !! | TCATGTTTATTACTATTTAT+TGG | + | chr5.3:69454272-69454291 | MS.gene37910:intron | 15.0% |
| !!! | CAATCCATATAAATTTTTTA+AGG | + | chr5.3:69452911-69452930 | MS.gene37910:intron | 15.0% |
| !!! | CTATTTTCTTAAATTATTAC+TGG | - | chr5.3:69453472-69453491 | None:intergenic | 15.0% |
| !!! | CTTAATTTTTTTTTTTGTGT+AGG | + | chr5.3:69452760-69452779 | MS.gene37910:intron | 15.0% |
| !!! | TTCTACTTTTTTATAAGTAT+TGG | + | chr5.3:69453856-69453875 | MS.gene37910:CDS | 15.0% |
| !! | GATAATGATAATCTAGAAAA+TGG | + | chr5.3:69454905-69454924 | MS.gene37910:intron | 20.0% |
| !! | TAAATTATTCCTCGAAATTA+TGG | - | chr5.3:69454872-69454891 | None:intergenic | 20.0% |
| !! | TGAGCCTTAAAAAATTTATA+TGG | - | chr5.3:69452918-69452937 | None:intergenic | 20.0% |
| !! | TGTTTATTACTATTTATTGG+GGG | + | chr5.3:69454275-69454294 | MS.gene37910:intron | 20.0% |
| !!! | ATATTTTGTTAGTAGCTTAT+TGG | + | chr5.3:69455597-69455616 | MS.gene37910:CDS | 20.0% |
| !!! | ATTATACACAATGATTTTGT+TGG | - | chr5.3:69452954-69452973 | None:intergenic | 20.0% |
| !!! | ATTTTTAAAATTGTCTCTGA+GGG | + | chr5.3:69453296-69453315 | MS.gene37910:intron | 20.0% |
| !!! | TACAGTTATTTTCTCATTTA+GGG | - | chr5.3:69455275-69455294 | None:intergenic | 20.0% |
| !!! | TGTATTGTATTGTATTCTTT+TGG | + | chr5.3:69454484-69454503 | MS.gene37910:intron | 20.0% |
| !!! | TTTTAAGGCTCAATTTTATT+TGG | + | chr5.3:69452926-69452945 | MS.gene37910:intron | 20.0% |
| ! | AAGTCATTAACAAAGTTTCA+AGG | - | chr5.3:69452743-69452762 | None:intergenic | 25.0% |
| ! | CGAGGAATAATTTATAGATA+AGG | + | chr5.3:69454878-69454897 | MS.gene37910:intron | 25.0% |
| ! | CTATGCTAATATATCAACAT+TGG | - | chr5.3:69454796-69454815 | None:intergenic | 25.0% |
| ! | GAAGTCCTTTAACTATTATT+TGG | + | chr5.3:69454025-69454044 | MS.gene37910:CDS | 25.0% |
| ! | GAGATTTAATCTATCTTCAT+TGG | + | chr5.3:69454953-69454972 | MS.gene37910:intron | 25.0% |
| ! | TCCTTTAACTATTATTTGGA+GGG | + | chr5.3:69454029-69454048 | MS.gene37910:CDS | 25.0% |
| ! | TTTCTATGTACACTTTCAAT+GGG | + | chr5.3:69455574-69455593 | MS.gene37910:CDS | 25.0% |
| !! | AAACTACAATAAGTGCTTTT+TGG | + | chr5.3:69455437-69455456 | MS.gene37910:CDS | 25.0% |
| !! | AATAACTACATGTGTTTCTA+TGG | + | chr5.3:69453506-69453525 | MS.gene37910:intron | 25.0% |
| !! | ACAGTTAGAGTTTTTCATAA+GGG | + | chr5.3:69455513-69455532 | MS.gene37910:CDS | 25.0% |
| !! | ATCATATTCTTTTCTTCCTT+TGG | - | chr5.3:69453820-69453839 | None:intergenic | 25.0% |
| !! | ATTGTATTCTTTTGGTATCA+TGG | + | chr5.3:69454492-69454511 | MS.gene37910:intron | 25.0% |
| !! | GACAGTTTCAATATTTTATC+TGG | - | chr5.3:69453440-69453459 | None:intergenic | 25.0% |
| !! | TCATTGGAATTTTGTATGAT+AGG | + | chr5.3:69454969-69454988 | MS.gene37910:intron | 25.0% |
| !! | TCTGAAATGTAAAAACACTT+TGG | - | chr5.3:69454304-69454323 | None:intergenic | 25.0% |
| !! | TTTTCTATGTACACTTTCAA+TGG | + | chr5.3:69455573-69455592 | MS.gene37910:CDS | 25.0% |
| !! | TTTTTCTTGTCTTATCAATG+AGG | + | chr5.3:69455734-69455753 | MS.gene37910:CDS | 25.0% |
| !!! | CACTTTTGTTTAAGAGATAT+CGG | - | chr5.3:69453372-69453391 | None:intergenic | 25.0% |
| !!! | CATTTTTAAAATTGTCTCTG+AGG | + | chr5.3:69453295-69453314 | MS.gene37910:intron | 25.0% |
| !!! | CTCAGAGACAATTTTAAAAA+TGG | - | chr5.3:69453297-69453316 | None:intergenic | 25.0% |
| !!! | GTACAGTTATTTTCTCATTT+AGG | - | chr5.3:69455276-69455295 | None:intergenic | 25.0% |
| !!! | TGTATAATTTTTGTTTGTGC+AGG | + | chr5.3:69452966-69452985 | MS.gene37910:intron | 25.0% |
| !!! | TTTTTAAAATTGTCTCTGAG+GGG | + | chr5.3:69453297-69453316 | MS.gene37910:intron | 25.0% |
| AATTGACACACTTATGTACA+AGG | - | chr5.3:69454445-69454464 | None:intergenic | 30.0% | |
| ACAAAGTAAGCAAGAAAAGA+TGG | + | chr5.3:69455632-69455651 | MS.gene37910:CDS | 30.0% | |
| ACATTCATGAACAGAAAAGT+TGG | + | chr5.3:69455184-69455203 | MS.gene37910:CDS | 30.0% | |
| ACCATAGTTACCAACTTTAT+GGG | + | chr5.3:69453086-69453105 | MS.gene37910:CDS | 30.0% | |
| ACCCTCCAAATAATAGTTAA+AGG | - | chr5.3:69454033-69454052 | None:intergenic | 30.0% | |
| ATATCTTAAATGATGCTGCA+CGG | + | chr5.3:69454398-69454417 | MS.gene37910:intron | 30.0% | |
| ATTGACACACTTATGTACAA+GGG | - | chr5.3:69454444-69454463 | None:intergenic | 30.0% | |
| ATTGTGAATGAGGTCAAAAT+TGG | + | chr5.3:69455820-69455839 | MS.gene37910:CDS | 30.0% | |
| ATTTGACACAAATGATCCAA+AGG | + | chr5.3:69453801-69453820 | MS.gene37910:CDS | 30.0% | |
| CAATACAACCACTGAAAATA+AGG | - | chr5.3:69453884-69453903 | None:intergenic | 30.0% | |
| CGAAAATTACCATAATTTCG+AGG | + | chr5.3:69454860-69454879 | MS.gene37910:intron | 30.0% | |
| CGATATCTCTTAAACAAAAG+TGG | + | chr5.3:69453370-69453389 | MS.gene37910:intron | 30.0% | |
| GCACTTTATACAATAGCTTT+AGG | + | chr5.3:69453733-69453752 | MS.gene37910:CDS | 30.0% | |
| GGTTTCTTGAATCTATACAA+TGG | - | chr5.3:69454000-69454019 | None:intergenic | 30.0% | |
| GTAAGTTAGACTACTTCTAT+TGG | + | chr5.3:69455677-69455696 | MS.gene37910:CDS | 30.0% | |
| GTCCTTTAACTATTATTTGG+AGG | + | chr5.3:69454028-69454047 | MS.gene37910:CDS | 30.0% | |
| GTTTATGTTCAAGACAATGT+AGG | + | chr5.3:69453904-69453923 | MS.gene37910:CDS | 30.0% | |
| TACCATAGTTACCAACTTTA+TGG | + | chr5.3:69453085-69453104 | MS.gene37910:CDS | 30.0% | |
| TATAGATTCAAGAAACCTCA+AGG | + | chr5.3:69454003-69454022 | MS.gene37910:CDS | 30.0% | |
| TATCGTTGAGAAAGAAAGAA+GGG | + | chr5.3:69455396-69455415 | MS.gene37910:CDS | 30.0% | |
| TCACATATACAGACAAATTC+AGG | + | chr5.3:69454133-69454152 | MS.gene37910:CDS | 30.0% | |
| TGATTCATTCTTCTCAAGTT+AGG | + | chr5.3:69454581-69454600 | MS.gene37910:intron | 30.0% | |
| TTCAAGATAACCATTGAGTA+AGG | - | chr5.3:69454106-69454125 | None:intergenic | 30.0% | |
| TTGAAGAGTAATCTTGACAA+GGG | + | chr5.3:69455655-69455674 | MS.gene37910:CDS | 30.0% | |
| TTGGATCATTTGTGTCAAAT+TGG | - | chr5.3:69453801-69453820 | None:intergenic | 30.0% | |
| ! | AAATTTTACCACTGTAGCTA+TGG | - | chr5.3:69453195-69453214 | None:intergenic | 30.0% |
| ! | AATATTTTCGGATAGATGCA+TGG | + | chr5.3:69454658-69454677 | MS.gene37910:intron | 30.0% |
| ! | CATTTTCTCTATTGTTGCAA+TGG | + | chr5.3:69455363-69455382 | MS.gene37910:CDS | 30.0% |
| ! | GACAGTTAGAGTTTTTCATA+AGG | + | chr5.3:69455512-69455531 | MS.gene37910:CDS | 30.0% |
| ! | GTACATAAGTGTGTCAATTT+TGG | + | chr5.3:69454446-69454465 | MS.gene37910:intron | 30.0% |
| ! | TGAGTGATTTTTCTTGCTAA+AGG | - | chr5.3:69455298-69455317 | None:intergenic | 30.0% |
| ! | TGTCTTCGGACTAATATTTT+CGG | + | chr5.3:69454646-69454665 | MS.gene37910:intron | 30.0% |
| !! | CTTATTTTCAGTGGTTGTAT+TGG | + | chr5.3:69453882-69453901 | MS.gene37910:CDS | 30.0% |
| !! | CTTTATACAATAGCTTTAGG+TGG | + | chr5.3:69453736-69453755 | MS.gene37910:CDS | 30.0% |
| !! | TAGCTTATTGGTTTCAATTG+TGG | + | chr5.3:69455609-69455628 | MS.gene37910:CDS | 30.0% |
| !! | TCAAGTTGAGGAAGTTAAAA+TGG | + | chr5.3:69455075-69455094 | MS.gene37910:CDS | 30.0% |
| !!! | TATTGGATCCTTATTTTCAG+TGG | + | chr5.3:69453873-69453892 | MS.gene37910:CDS | 30.0% |
| !!! | TATTTGGAGGGTTTTGTTTT+TGG | + | chr5.3:69454041-69454060 | MS.gene37910:CDS | 30.0% |
| AAAATCACTCACAATCCTCA+AGG | + | chr5.3:69455307-69455326 | MS.gene37910:CDS | 35.0% | |
| AAATCCAATGTGTCAGGATT+TGG | + | chr5.3:69453769-69453788 | MS.gene37910:CDS | 35.0% | |
| AAATTGAACGAGAATCGCAT+AGG | + | chr5.3:69454827-69454846 | MS.gene37910:intron | 35.0% | |
| AAATTGACACCTCATAGACT+CGG | + | chr5.3:69454762-69454781 | MS.gene37910:intron | 35.0% | |
| AACTTAGTGACATACTTGGT+TGG | + | chr5.3:69453032-69453051 | MS.gene37910:CDS | 35.0% | |
| AATTGAACGAGAATCGCATA+GGG | + | chr5.3:69454828-69454847 | MS.gene37910:intron | 35.0% | |
| ACAAAACAAAAACTGGAGGA+TGG | + | chr5.3:69452858-69452877 | MS.gene37910:CDS | 35.0% | |
| AGATAACCATTGAGTAAGGT+AGG | - | chr5.3:69454102-69454121 | None:intergenic | 35.0% | |
| AGGATGAAATCTATGAGTAC+TGG | + | chr5.3:69455547-69455566 | MS.gene37910:CDS | 35.0% | |
| AGTATGCATGTTGACCAAAT+GGG | - | chr5.3:69455115-69455134 | None:intergenic | 35.0% | |
| ATAGTTAAAGGACTTCCTTG+AGG | - | chr5.3:69454021-69454040 | None:intergenic | 35.0% | |
| ATTAGTCCGAAGACAATGAA+GGG | - | chr5.3:69454641-69454660 | None:intergenic | 35.0% | |
| CAAGTATGTCACTAAGTTCA+TGG | - | chr5.3:69453030-69453049 | None:intergenic | 35.0% | |
| CAATGGTTATCTTGAAGCTA+AGG | + | chr5.3:69454110-69454129 | MS.gene37910:CDS | 35.0% | |
| CATGAACTTAGTGACATACT+TGG | + | chr5.3:69453028-69453047 | MS.gene37910:CDS | 35.0% | |
| CCTAGATGAAACAAACTCAA+AGG | + | chr5.3:69455012-69455031 | MS.gene37910:CDS | 35.0% | |
| CTATCGTTGAGAAAGAAAGA+AGG | + | chr5.3:69455395-69455414 | MS.gene37910:CDS | 35.0% | |
| GATGAAACAAACTCAAAGGA+CGG | + | chr5.3:69455016-69455035 | MS.gene37910:CDS | 35.0% | |
| GATGATGAGAAAAGCTGATA+AGG | - | chr5.3:69455233-69455252 | None:intergenic | 35.0% | |
| GCTGAAAGAATATGTGTCAT+GGG | + | chr5.3:69452999-69453018 | MS.gene37910:CDS | 35.0% | |
| GGAATAAAATCCAATGTGTC+AGG | + | chr5.3:69453763-69453782 | MS.gene37910:CDS | 35.0% | |
| GTAAACCAAAAGAAACACTG+TGG | + | chr5.3:69454927-69454946 | MS.gene37910:intron | 35.0% | |
| GTCATTGTTGAAACTAACCA+TGG | - | chr5.3:69455055-69455074 | None:intergenic | 35.0% | |
| GTTGAAGAGTAATCTTGACA+AGG | + | chr5.3:69455654-69455673 | MS.gene37910:CDS | 35.0% | |
| TAATCAAACTCCTTCCCATT+TGG | + | chr5.3:69455098-69455117 | MS.gene37910:CDS | 35.0% | |
| TAGGTTCTTGTTGCAAGTAA+TGG | + | chr5.3:69452779-69452798 | MS.gene37910:intron | 35.0% | |
| TATTAGTCCGAAGACAATGA+AGG | - | chr5.3:69454642-69454661 | None:intergenic | 35.0% | |
| TCTCATTTAGGGAAGTAAAG+AGG | - | chr5.3:69455264-69455283 | None:intergenic | 35.0% | |
| TGCTGAAAGAATATGTGTCA+TGG | + | chr5.3:69452998-69453017 | MS.gene37910:CDS | 35.0% | |
| ! | CCTTTGAGTTTGTTTCATCT+AGG | - | chr5.3:69455015-69455034 | None:intergenic | 35.0% |
| ! | GCAAGTAATGGAGAGAAAAA+AGG | + | chr5.3:69452791-69452810 | MS.gene37910:CDS | 35.0% |
| ! | GCTACAGTGGTAAAATTTTC+AGG | + | chr5.3:69453197-69453216 | MS.gene37910:intron | 35.0% |
| ! | TACATGTGTTTCTATGGTGT+CGG | + | chr5.3:69453512-69453531 | MS.gene37910:intron | 35.0% |
| ! | TCTTTCCACAGTGTTTCTTT+TGG | - | chr5.3:69454935-69454954 | None:intergenic | 35.0% |
| ! | TTCAACAATGACTCAAGTTG+AGG | + | chr5.3:69455063-69455082 | MS.gene37910:CDS | 35.0% |
| !! | CAAAATTGGTGTTGATGGAA+AGG | + | chr5.3:69455834-69455853 | MS.gene37910:CDS | 35.0% |
| !! | TATACAATAGCTTTAGGTGG+TGG | + | chr5.3:69453739-69453758 | MS.gene37910:CDS | 35.0% |
| !! | TCCCATAAAGTTGGTAACTA+TGG | - | chr5.3:69453090-69453109 | None:intergenic | 35.0% |
| !! | TTTAAGAGATATCGGCTTAG+TGG | - | chr5.3:69453364-69453383 | None:intergenic | 35.0% |
| !! | TTTCTAGCTGATGCAAAACT+TGG | + | chr5.3:69453140-69453159 | MS.gene37910:CDS | 35.0% |
| !!! | GTACCTCAGTTTTTTCTAGT+TGG | + | chr5.3:69455463-69455482 | MS.gene37910:CDS | 35.0% |
| AAGACAATGTAGGAAGAGGT+TGG | + | chr5.3:69453914-69453933 | MS.gene37910:CDS | 40.0% | |
| AAGGACTCACAAGTCTTCAA+AGG | + | chr5.3:69455326-69455345 | MS.gene37910:CDS | 40.0% | |
| AATCTCGTAACCTCAAGAGA+CGG | - | chr5.3:69453332-69453351 | None:intergenic | 40.0% | |
| AATTTCAGCAGGGACAATGT+TGG | + | chr5.3:69453945-69453964 | MS.gene37910:CDS | 40.0% | |
| ACGGAAACAACGAAAATCCA+TGG | + | chr5.3:69455035-69455054 | MS.gene37910:CDS | 40.0% | |
| ACGGATATTCTGTCTTGCTT+TGG | + | chr5.3:69454417-69454436 | MS.gene37910:intron | 40.0% | |
| AGACAATGTAGGAAGAGGTT+GGG | + | chr5.3:69453915-69453934 | MS.gene37910:CDS | 40.0% | |
| AGAGCTTGTGATTGTGAATG+AGG | + | chr5.3:69455810-69455829 | MS.gene37910:CDS | 40.0% | |
| AGATCCAAATCCTGACACAT+TGG | - | chr5.3:69453776-69453795 | None:intergenic | 40.0% | |
| AGGACTCACAAGTCTTCAAA+GGG | + | chr5.3:69455327-69455346 | MS.gene37910:CDS | 40.0% | |
| AGTCTTCAAAGGGTAGGAAT+TGG | + | chr5.3:69455337-69455356 | MS.gene37910:CDS | 40.0% | |
| CTAGATGCTATAGAAGAGTC+AGG | - | chr5.3:69454537-69454556 | None:intergenic | 40.0% | |
| CTCATAGATTTCATCCTCTC+AGG | - | chr5.3:69455544-69455563 | None:intergenic | 40.0% | |
| CTTAAGACCATAGCACTTGA+TGG | + | chr5.3:69454610-69454629 | MS.gene37910:intron | 40.0% | |
| GAGTATGCATGTTGACCAAA+TGG | - | chr5.3:69455116-69455135 | None:intergenic | 40.0% | |
| GAGTTGTTCAACGACCATTA+CGG | - | chr5.3:69454685-69454704 | None:intergenic | 40.0% | |
| GCACCAACTAGAAAAAACTG+AGG | - | chr5.3:69455469-69455488 | None:intergenic | 40.0% | |
| GCATATCCCTTCATTGTCTT+CGG | + | chr5.3:69454632-69454651 | MS.gene37910:intron | 40.0% | |
| GCTGACAAAACAAAAACTGG+AGG | + | chr5.3:69452854-69452873 | MS.gene37910:CDS | 40.0% | |
| GGGTGTGTGTATGTTAACTT+TGG | + | chr5.3:69453606-69453625 | MS.gene37910:intron | 40.0% | |
| GTAGTCAGTAACAACACTTC+AGG | - | chr5.3:69453557-69453576 | None:intergenic | 40.0% | |
| GTTCAAGACAATGTAGGAAG+AGG | + | chr5.3:69453910-69453929 | MS.gene37910:CDS | 40.0% | |
| GTTGAGAGTTCCCATAAAGT+TGG | - | chr5.3:69453099-69453118 | None:intergenic | 40.0% | |
| TAGGGAAGTAAAGAGGAGAA+TGG | - | chr5.3:69455257-69455276 | None:intergenic | 40.0% | |
| TCTGATCCTACCTTACTCAA+TGG | + | chr5.3:69454093-69454112 | MS.gene37910:CDS | 40.0% | |
| TGAGTAAGGTAGGATCAGAA+GGG | - | chr5.3:69454092-69454111 | None:intergenic | 40.0% | |
| TGTAGCTATGGTTGCAGATA+TGG | - | chr5.3:69453183-69453202 | None:intergenic | 40.0% | |
| TGTCTTCTTACTTCACTGCA+TGG | - | chr5.3:69453661-69453680 | None:intergenic | 40.0% | |
| TTGAGTAAGGTAGGATCAGA+AGG | - | chr5.3:69454093-69454112 | None:intergenic | 40.0% | |
| ! | GGAGAAGCTTTTGCTTATGT+TGG | + | chr5.3:69455490-69455509 | MS.gene37910:CDS | 40.0% |
| ! | GGTCAACATGCATACTCTTT+TGG | + | chr5.3:69455119-69455138 | MS.gene37910:CDS | 40.0% |
| ! | TATTGGTTGCTAGCAGTTCT+TGG | + | chr5.3:69455694-69455713 | MS.gene37910:CDS | 40.0% |
| !! | GAGGTCAAAATTGGTGTTGA+TGG | + | chr5.3:69455829-69455848 | MS.gene37910:CDS | 40.0% |
| !! | GCAGTTGGTATTTTGCTTTG+TGG | + | chr5.3:69453970-69453989 | MS.gene37910:CDS | 40.0% |
| !! | TGTAGCTTGCTCAATTGTGA+AGG | - | chr5.3:69455167-69455186 | None:intergenic | 40.0% |
| !!! | CAGTTTTTGTTTTGTCAGCC+GGG | - | chr5.3:69452853-69452872 | None:intergenic | 40.0% |
| !!! | CAGTTTTTTCTAGTTGGTGC+TGG | + | chr5.3:69455469-69455488 | MS.gene37910:CDS | 40.0% |
| !!! | CCAGTTTTTGTTTTGTCAGC+CGG | - | chr5.3:69452854-69452873 | None:intergenic | 40.0% |
| !!! | TGTTTTTGGCTTGGAAGAAG+AGG | + | chr5.3:69454055-69454074 | MS.gene37910:CDS | 40.0% |
| AAAGCTGATAAGGATCCTGC+TGG | - | chr5.3:69455223-69455242 | None:intergenic | 45.0% | |
| AAGGTAGGATCAGAAGGGAT+AGG | - | chr5.3:69454087-69454106 | None:intergenic | 45.0% | |
| AGGCATAGAAGACAATGCTG+CGG | + | chr5.3:69452811-69452830 | MS.gene37910:CDS | 45.0% | |
| ATCTGCAACCATAGCTACAG+TGG | + | chr5.3:69453184-69453203 | MS.gene37910:CDS | 45.0% | |
| CACTTGCTTGAATGCACTGA+TGG | - | chr5.3:69453687-69453706 | None:intergenic | 45.0% | |
| CAGCTAGAAAACCACCAAGA+AGG | - | chr5.3:69453130-69453149 | None:intergenic | 45.0% | |
| CATCAGTGCATTCAAGCAAG+TGG | + | chr5.3:69453685-69453704 | MS.gene37910:CDS | 45.0% | |
| CCGGCTGACAAAACAAAAAC+TGG | + | chr5.3:69452851-69452870 | MS.gene37910:CDS | 45.0% | |
| CTAGCAGCAGGACTAATCTT+AGG | + | chr5.3:69452881-69452900 | MS.gene37910:CDS | 45.0% | |
| CTCACAAGTCTTCAAAGGGT+AGG | + | chr5.3:69455331-69455350 | MS.gene37910:CDS | 45.0% | |
| CTTCTTACTTCACTGCATGG+AGG | - | chr5.3:69453658-69453677 | None:intergenic | 45.0% | |
| GACAATGTAGGAAGAGGTTG+GGG | + | chr5.3:69453916-69453935 | MS.gene37910:CDS | 45.0% | |
| GACACTGTTGTGTTGCAACA+GGG | + | chr5.3:69453586-69453605 | MS.gene37910:intron | 45.0% | |
| GATAGATGCATGGACCGTAA+TGG | + | chr5.3:69454668-69454687 | MS.gene37910:intron | 45.0% | |
| GATTTGAACTCCGTCTCTTG+AGG | + | chr5.3:69453319-69453338 | MS.gene37910:intron | 45.0% | |
| GGATATGCCATCAAGTGCTA+TGG | - | chr5.3:69454620-69454639 | None:intergenic | 45.0% | |
| GGGGATATGGAATTTCAGCA+GGG | + | chr5.3:69453935-69453954 | MS.gene37910:CDS | 45.0% | |
| TGAAGACTTGTGAGTCCTTG+AGG | - | chr5.3:69455325-69455344 | None:intergenic | 45.0% | |
| TGACACTGTTGTGTTGCAAC+AGG | + | chr5.3:69453585-69453604 | MS.gene37910:intron | 45.0% | |
| TGCATGTTGACCAAATGGGA+AGG | - | chr5.3:69455111-69455130 | None:intergenic | 45.0% | |
| TGGGGATATGGAATTTCAGC+AGG | + | chr5.3:69453934-69453953 | MS.gene37910:CDS | 45.0% | |
| ! | ATGGGAACTCTCAACTTGCT+TGG | + | chr5.3:69453104-69453123 | MS.gene37910:CDS | 45.0% |
| ! | CTTCAGGTTAAAAGCGTGTC+TGG | - | chr5.3:69453541-69453560 | None:intergenic | 45.0% |
| !! | ACAATAGCTTTAGGTGGTGG+AGG | + | chr5.3:69453742-69453761 | MS.gene37910:CDS | 45.0% |
| !! | CTAGGATTGCTGCTTTGTCA+AGG | - | chr5.3:69454997-69455016 | None:intergenic | 45.0% |
| !!! | GGAGGGTTTTGTTTTTGGCT+TGG | + | chr5.3:69454046-69454065 | MS.gene37910:CDS | 45.0% |
| CTTACTTCACTGCATGGAGG+AGG | - | chr5.3:69453655-69453674 | None:intergenic | 50.0% | |
| GACTAGTAGCCGAGTCTATG+AGG | - | chr5.3:69454774-69454793 | None:intergenic | 50.0% | |
| GGATCACTAGAGATTCCAGC+AGG | + | chr5.3:69455205-69455224 | MS.gene37910:CDS | 50.0% | |
| GTAGGAAGAGGTTGGGGATA+TGG | + | chr5.3:69453922-69453941 | MS.gene37910:CDS | 50.0% | |
| TGGTAGCAGAGCTAGCTGAA+TGG | - | chr5.3:69453070-69453089 | None:intergenic | 50.0% | |
| ! | AACTTGCTTGGCCTTCTTGG+TGG | + | chr5.3:69453116-69453135 | MS.gene37910:CDS | 50.0% |
| ! | CTCAACTTGCTTGGCCTTCT+TGG | + | chr5.3:69453113-69453132 | MS.gene37910:CDS | 50.0% |
| !! | AATGCTGCGGTCGATTTTCG+AGG | + | chr5.3:69452824-69452843 | MS.gene37910:CDS | 50.0% |
| !! | GGGACAATGTTGGTAGCAGT+TGG | + | chr5.3:69453955-69453974 | MS.gene37910:CDS | 50.0% |
| !! | TCATAAGGGAAGCACCTGAG+AGG | + | chr5.3:69455527-69455546 | MS.gene37910:CDS | 50.0% |
| !! | CATGGAGGAGGTGTCATGCT+AGG | - | chr5.3:69453643-69453662 | None:intergenic | 55.0% |
| !! | GGTCGATTTTCGAGGTCACC+CGG | + | chr5.3:69452832-69452851 | MS.gene37910:CDS | 55.0% |
| ACTGGAGGATGGCTAGCAGC+AGG | + | chr5.3:69452869-69452888 | MS.gene37910:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 69452690 | 69455867 | 69452690 | ID=MS.gene37910 |
| chr5.3 | mRNA | 69452690 | 69455867 | 69452690 | ID=MS.gene37910.t1;Parent=MS.gene37910 |
| chr5.3 | exon | 69452690 | 69452692 | 69452690 | ID=MS.gene37910.t1.exon1;Parent=MS.gene37910.t1 |
| chr5.3 | CDS | 69452690 | 69452692 | 69452690 | ID=cds.MS.gene37910.t1;Parent=MS.gene37910.t1 |
| chr5.3 | exon | 69452782 | 69452902 | 69452782 | ID=MS.gene37910.t1.exon2;Parent=MS.gene37910.t1 |
| chr5.3 | CDS | 69452782 | 69452902 | 69452782 | ID=cds.MS.gene37910.t1;Parent=MS.gene37910.t1 |
| chr5.3 | exon | 69452988 | 69453205 | 69452988 | ID=MS.gene37910.t1.exon3;Parent=MS.gene37910.t1 |
| chr5.3 | CDS | 69452988 | 69453205 | 69452988 | ID=cds.MS.gene37910.t1;Parent=MS.gene37910.t1 |
| chr5.3 | exon | 69453607 | 69454154 | 69453607 | ID=MS.gene37910.t1.exon4;Parent=MS.gene37910.t1 |
| chr5.3 | CDS | 69453607 | 69454154 | 69453607 | ID=cds.MS.gene37910.t1;Parent=MS.gene37910.t1 |
| chr5.3 | exon | 69454991 | 69455867 | 69454991 | ID=MS.gene37910.t1.exon5;Parent=MS.gene37910.t1 |
| chr5.3 | CDS | 69454991 | 69455867 | 69454991 | ID=cds.MS.gene37910.t1;Parent=MS.gene37910.t1 |
| Gene Sequence |
| Protein sequence |
