Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069681.t1 | XP_013452780.1 | 98.4 | 499 | 8 | 0 | 1 | 499 | 1 | 499 | 3.10E-288 | 1000.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069681.t1 | P54767 | 77.2 | 505 | 98 | 2 | 6 | 499 | 4 | 502 | 3.1e-233 | 808.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069681.t1 | A0A072UCM6 | 98.4 | 499 | 8 | 0 | 1 | 499 | 1 | 499 | 2.2e-288 | 1000.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene069681 | 0.869712 | 2.52E-66 | -1.69E-46 |
| MS.gene049151 | MS.gene069681 | 0.831824 | 1.34E-55 | -1.69E-46 |
| MS.gene049153 | MS.gene069681 | 0.862593 | 4.54E-64 | -1.69E-46 |
| MS.gene049233 | MS.gene069681 | 0.80302 | 4.25E-49 | -1.69E-46 |
| MS.gene049260 | MS.gene069681 | 0.868186 | 7.87E-66 | -1.69E-46 |
| MS.gene049346 | MS.gene069681 | 0.835236 | 1.89E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene069681 | 0.820487 | 6.68E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene069681 | 0.811914 | 5.52E-51 | -1.69E-46 |
| MS.gene049491 | MS.gene069681 | 0.809328 | 2.00E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene069681 | 0.870751 | 1.15E-66 | -1.69E-46 |
| MS.gene049910 | MS.gene069681 | 0.829717 | 4.40E-55 | -1.69E-46 |
| MS.gene049915 | MS.gene069681 | 0.825863 | 3.72E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene069681 | 0.854829 | 9.49E-62 | -1.69E-46 |
| MS.gene050226 | MS.gene069681 | 0.805027 | 1.63E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene069681 | 0.883799 | 3.30E-71 | -1.69E-46 |
| MS.gene050397 | MS.gene069681 | 0.810555 | 1.09E-50 | -1.69E-46 |
| MS.gene050406 | MS.gene069681 | 0.805327 | 1.41E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene069681 | 0.832647 | 8.39E-56 | -1.69E-46 |
| MS.gene050464 | MS.gene069681 | 0.800932 | 1.14E-48 | -1.69E-46 |
| MS.gene050529 | MS.gene069681 | 0.818399 | 2.00E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene069681 | 0.817233 | 3.67E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene069681 | 0.807344 | 5.29E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene069681 | 0.818584 | 1.82E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene069681 | 0.811963 | 5.38E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene069681 | 0.813259 | 2.80E-51 | -1.69E-46 |
| MS.gene050900 | MS.gene069681 | 0.822469 | 2.33E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene069681 | 0.818685 | 1.72E-52 | -1.69E-46 |
| MS.gene05119 | MS.gene069681 | -0.842167 | 3.05E-58 | -1.69E-46 |
| MS.gene051360 | MS.gene069681 | 0.835922 | 1.27E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene069681 | 0.824478 | 7.90E-54 | -1.69E-46 |
| MS.gene051663 | MS.gene069681 | 0.812743 | 3.64E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene069681 | 0.863371 | 2.61E-64 | -1.69E-46 |
| MS.gene051983 | MS.gene069681 | 0.838239 | 3.24E-57 | -1.69E-46 |
| MS.gene052011 | MS.gene069681 | -0.808092 | 3.67E-50 | -1.69E-46 |
| MS.gene052025 | MS.gene069681 | 0.810275 | 1.25E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene069681 | 0.851433 | 8.91E-61 | -1.69E-46 |
| MS.gene052078 | MS.gene069681 | 0.816015 | 6.87E-52 | -1.69E-46 |
| MS.gene052135 | MS.gene069681 | 0.808508 | 2.99E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene069681 | 0.828668 | 7.91E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene069681 | 0.866974 | 1.93E-65 | -1.69E-46 |
| MS.gene052207 | MS.gene069681 | 0.823471 | 1.36E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene069681 | 0.856208 | 3.76E-62 | -1.69E-46 |
| MS.gene052255 | MS.gene069681 | 0.840578 | 7.99E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene069681 | 0.808789 | 2.61E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene069681 | 0.871386 | 7.11E-67 | -1.69E-46 |
| MS.gene052485 | MS.gene069681 | 0.827224 | 1.76E-54 | -1.69E-46 |
| MS.gene052917 | MS.gene069681 | -0.819129 | 1.37E-52 | -1.69E-46 |
| MS.gene053073 | MS.gene069681 | 0.839654 | 1.39E-57 | -1.69E-46 |
| MS.gene05316 | MS.gene069681 | 0.848401 | 6.28E-60 | -1.69E-46 |
| MS.gene053184 | MS.gene069681 | 0.802167 | 6.38E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene069681 | 0.858183 | 9.81E-63 | -1.69E-46 |
| MS.gene053494 | MS.gene069681 | 0.835993 | 1.21E-56 | -1.69E-46 |
| MS.gene053555 | MS.gene069681 | 0.819971 | 8.77E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene069681 | 0.843542 | 1.31E-58 | -1.69E-46 |
| MS.gene053559 | MS.gene069681 | 0.809162 | 2.17E-50 | -1.69E-46 |
| MS.gene053577 | MS.gene069681 | 0.806243 | 9.04E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene069681 | 0.890313 | 1.10E-73 | -1.69E-46 |
| MS.gene053928 | MS.gene069681 | 0.829252 | 5.71E-55 | -1.69E-46 |
| MS.gene054010 | MS.gene069681 | 0.812409 | 4.30E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene069681 | 0.8248 | 6.63E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene069681 | 0.812296 | 4.55E-51 | -1.69E-46 |
| MS.gene054013 | MS.gene069681 | 0.807022 | 6.19E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene069681 | 0.804765 | 1.85E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene069681 | 0.82309 | 1.67E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene069681 | 0.832591 | 8.66E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene069681 | 0.827078 | 1.91E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene069681 | 0.854593 | 1.11E-61 | -1.69E-46 |
| MS.gene054542 | MS.gene069681 | 0.844306 | 8.20E-59 | -1.69E-46 |
| MS.gene054556 | MS.gene069681 | 0.803639 | 3.17E-49 | -1.69E-46 |
| MS.gene054918 | MS.gene069681 | 0.82705 | 1.94E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene069681 | 0.869588 | 2.77E-66 | -1.69E-46 |
| MS.gene054983 | MS.gene069681 | 0.820262 | 7.53E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene069681 | 0.869838 | 2.29E-66 | -1.69E-46 |
| MS.gene055277 | MS.gene069681 | 0.847852 | 8.90E-60 | -1.69E-46 |
| MS.gene055358 | MS.gene069681 | 0.823835 | 1.12E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene069681 | 0.81809 | 2.35E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene069681 | 0.852433 | 4.63E-61 | -1.69E-46 |
| MS.gene055428 | MS.gene069681 | 0.855647 | 5.48E-62 | -1.69E-46 |
| MS.gene05553 | MS.gene069681 | 0.839593 | 1.44E-57 | -1.69E-46 |
| MS.gene055604 | MS.gene069681 | 0.861455 | 1.01E-63 | -1.69E-46 |
| MS.gene055666 | MS.gene069681 | 0.847583 | 1.06E-59 | -1.69E-46 |
| MS.gene055712 | MS.gene069681 | 0.825837 | 3.77E-54 | -1.69E-46 |
| MS.gene055859 | MS.gene069681 | 0.843212 | 1.61E-58 | -1.69E-46 |
| MS.gene056191 | MS.gene069681 | 0.807529 | 4.83E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene069681 | 0.846554 | 2.02E-59 | -1.69E-46 |
| MS.gene056447 | MS.gene069681 | 0.807544 | 4.80E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene069681 | 0.82066 | 6.10E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene069681 | 0.840958 | 6.35E-58 | -1.69E-46 |
| MS.gene056723 | MS.gene069681 | 0.831146 | 1.97E-55 | -1.69E-46 |
| MS.gene056772 | MS.gene069681 | 0.8002 | 1.61E-48 | -1.69E-46 |
| MS.gene056902 | MS.gene069681 | 0.810144 | 1.33E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene069681 | 0.824831 | 6.52E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene069681 | 0.875383 | 3.22E-68 | -1.69E-46 |
| MS.gene057121 | MS.gene069681 | 0.819947 | 8.89E-53 | -1.69E-46 |
| MS.gene057396 | MS.gene069681 | 0.819702 | 1.01E-52 | -1.69E-46 |
| MS.gene057439 | MS.gene069681 | 0.814948 | 1.19E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene069681 | 0.875681 | 2.54E-68 | -1.69E-46 |
| MS.gene057449 | MS.gene069681 | 0.854916 | 8.95E-62 | -1.69E-46 |
| MS.gene057450 | MS.gene069681 | 0.872 | 4.45E-67 | -1.69E-46 |
| MS.gene057469 | MS.gene069681 | 0.861724 | 8.39E-64 | -1.69E-46 |
| MS.gene057690 | MS.gene069681 | 0.801882 | 7.30E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene069681 | 0.852633 | 4.06E-61 | -1.69E-46 |
| MS.gene057750 | MS.gene069681 | 0.834696 | 2.58E-56 | -1.69E-46 |
| MS.gene057754 | MS.gene069681 | 0.821752 | 3.42E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene069681 | 0.83735 | 5.47E-57 | -1.69E-46 |
| MS.gene057824 | MS.gene069681 | 0.804336 | 2.27E-49 | -1.69E-46 |
| MS.gene057825 | MS.gene069681 | 0.808637 | 2.81E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene069681 | 0.882022 | 1.48E-70 | -1.69E-46 |
| MS.gene058082 | MS.gene069681 | 0.837962 | 3.81E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene069681 | 0.853748 | 1.95E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene069681 | 0.876767 | 1.07E-68 | -1.69E-46 |
| MS.gene058236 | MS.gene069681 | 0.803949 | 2.73E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene069681 | 0.801452 | 8.95E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene069681 | 0.834902 | 2.29E-56 | -1.69E-46 |
| MS.gene05842 | MS.gene069681 | 0.801924 | 7.16E-49 | -1.69E-46 |
| MS.gene058435 | MS.gene069681 | 0.810041 | 1.40E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene069681 | 0.807289 | 5.44E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene069681 | 0.851333 | 9.50E-61 | -1.69E-46 |
| MS.gene05872 | MS.gene069681 | 0.800462 | 1.43E-48 | -1.69E-46 |
| MS.gene058749 | MS.gene069681 | 0.845586 | 3.70E-59 | -1.69E-46 |
| MS.gene058833 | MS.gene069681 | 0.808438 | 3.10E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene069681 | 0.814145 | 1.79E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene069681 | 0.841894 | 3.60E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene069681 | 0.806709 | 7.21E-50 | -1.69E-46 |
| MS.gene058949 | MS.gene069681 | 0.86219 | 6.04E-64 | -1.69E-46 |
| MS.gene059011 | MS.gene069681 | 0.807777 | 4.28E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene069681 | 0.866256 | 3.26E-65 | -1.69E-46 |
| MS.gene059128 | MS.gene069681 | 0.821956 | 3.06E-53 | -1.69E-46 |
| MS.gene059285 | MS.gene069681 | 0.888638 | 4.94E-73 | -1.69E-46 |
| MS.gene059294 | MS.gene069681 | 0.816285 | 5.98E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene069681 | 0.827972 | 1.16E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene069681 | 0.843236 | 1.59E-58 | -1.69E-46 |
| MS.gene059518 | MS.gene069681 | 0.837851 | 4.07E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene069681 | 0.855591 | 5.69E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene069681 | 0.829111 | 6.18E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene069681 | 0.849322 | 3.48E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene069681 | 0.861797 | 7.97E-64 | -1.69E-46 |
| MS.gene059695 | MS.gene069681 | 0.859893 | 3.02E-63 | -1.69E-46 |
| MS.gene059807 | MS.gene069681 | 0.805722 | 1.16E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene069681 | 0.864602 | 1.08E-64 | -1.69E-46 |
| MS.gene059876 | MS.gene069681 | 0.81049 | 1.12E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene069681 | 0.860376 | 2.16E-63 | -1.69E-46 |
| MS.gene059899 | MS.gene069681 | 0.84957 | 2.97E-60 | -1.69E-46 |
| MS.gene059974 | MS.gene069681 | 0.815648 | 8.30E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene069681 | 0.860106 | 2.60E-63 | -1.69E-46 |
| MS.gene060407 | MS.gene069681 | 0.836016 | 1.20E-56 | -1.69E-46 |
| MS.gene060476 | MS.gene069681 | 0.810007 | 1.43E-50 | -1.69E-46 |
| MS.gene060495 | MS.gene069681 | 0.863282 | 2.78E-64 | -1.69E-46 |
| MS.gene060569 | MS.gene069681 | 0.806954 | 6.40E-50 | -1.69E-46 |
| MS.gene060943 | MS.gene069681 | 0.812009 | 5.26E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene069681 | 0.89422 | 3.03E-75 | -1.69E-46 |
| MS.gene061051 | MS.gene069681 | -0.847055 | 1.47E-59 | -1.69E-46 |
| MS.gene061112 | MS.gene069681 | 0.841626 | 4.24E-58 | -1.69E-46 |
| MS.gene061113 | MS.gene069681 | 0.809943 | 1.47E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene069681 | -0.821519 | 3.87E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene069681 | 0.802325 | 5.92E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene069681 | 0.850909 | 1.25E-60 | -1.69E-46 |
| MS.gene061265 | MS.gene069681 | 0.850238 | 1.93E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069681.t1 | MTR_6g075210 | 98.397 | 499 | 8 | 0 | 1 | 499 | 1 | 499 | 0.0 | 1023 |
| MS.gene069681.t1 | MTR_3g064740 | 74.560 | 511 | 115 | 4 | 1 | 499 | 1 | 508 | 0.0 | 785 |
| MS.gene069681.t1 | MTR_5g077090 | 72.561 | 492 | 127 | 2 | 16 | 499 | 4 | 495 | 0.0 | 752 |
| MS.gene069681.t1 | MTR_6g075210 | 98.907 | 366 | 4 | 0 | 134 | 499 | 1 | 366 | 0.0 | 751 |
| MS.gene069681.t1 | MTR_6g075210 | 99.023 | 307 | 3 | 0 | 193 | 499 | 1 | 307 | 0.0 | 628 |
| MS.gene069681.t1 | MTR_3g064740 | 75.188 | 399 | 93 | 1 | 99 | 491 | 1 | 399 | 0.0 | 625 |
| MS.gene069681.t1 | MTR_7g022310 | 26.171 | 363 | 238 | 11 | 84 | 436 | 157 | 499 | 3.85e-20 | 94.0 |
| MS.gene069681.t1 | MTR_5g075840 | 45.977 | 87 | 37 | 1 | 367 | 443 | 30 | 116 | 9.25e-15 | 72.0 |
| MS.gene069681.t1 | MTR_5g075820 | 76.923 | 39 | 9 | 0 | 255 | 293 | 15 | 53 | 3.35e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069681.t1 | AT2G02010 | 77.980 | 495 | 100 | 2 | 1 | 495 | 1 | 486 | 0.0 | 813 |
| MS.gene069681.t1 | AT2G02010 | 77.980 | 495 | 100 | 2 | 1 | 495 | 53 | 538 | 0.0 | 813 |
| MS.gene069681.t1 | AT5G17330 | 76.031 | 509 | 105 | 4 | 1 | 499 | 1 | 502 | 0.0 | 794 |
| MS.gene069681.t1 | AT3G17760 | 78.119 | 489 | 100 | 3 | 14 | 499 | 10 | 494 | 0.0 | 794 |
| MS.gene069681.t1 | AT3G17760 | 78.119 | 489 | 100 | 3 | 14 | 499 | 10 | 494 | 0.0 | 794 |
| MS.gene069681.t1 | AT2G02000 | 75.101 | 494 | 114 | 2 | 1 | 494 | 1 | 485 | 0.0 | 785 |
| MS.gene069681.t1 | AT1G65960 | 76.447 | 501 | 109 | 4 | 1 | 499 | 1 | 494 | 0.0 | 784 |
| MS.gene069681.t1 | AT1G65960 | 76.359 | 368 | 82 | 3 | 134 | 499 | 1 | 365 | 0.0 | 574 |
| MS.gene069681.t1 | AT1G65960 | 76.359 | 368 | 82 | 3 | 134 | 499 | 1 | 365 | 0.0 | 574 |
| MS.gene069681.t1 | AT1G65960 | 76.359 | 368 | 82 | 3 | 134 | 499 | 1 | 365 | 0.0 | 574 |
| MS.gene069681.t1 | AT3G17720 | 74.074 | 162 | 39 | 1 | 94 | 255 | 27 | 185 | 2.46e-82 | 254 |
| MS.gene069681.t1 | AT1G27980 | 24.862 | 362 | 240 | 11 | 84 | 434 | 160 | 500 | 2.16e-17 | 85.5 |
Find 103 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTGTGTTGCAGCCATTT+TGG | 0.165886 | 6.1:-66970678 | MS.gene069681:CDS |
| CTGGTATTGGTTGGGTTGTT+TGG | 0.223066 | 6.1:-66970439 | MS.gene069681:CDS |
| TTCTCTACCCTGATCTTCTA+TGG | 0.227683 | 6.1:-66970526 | MS.gene069681:CDS |
| ATCTGATATGCTGCATCTTT+TGG | 0.270173 | 6.1:+66972681 | None:intergenic |
| CTCAATACTACCAATTTATA+CGG | 0.284916 | 6.1:-66970071 | MS.gene069681:CDS |
| CTGTCCTCCGAGTGGTGATT+AGG | 0.306897 | 6.1:-66969637 | MS.gene069681:CDS |
| TCCTGTCACTACTGAGCTTC+AGG | 0.325572 | 6.1:-66972523 | MS.gene069681:intron |
| CGAAGCCTAGCCGTATAAAT+TGG | 0.327648 | 6.1:+66970061 | None:intergenic |
| GATAAGCCTAACATAGTTAC+TGG | 0.334663 | 6.1:-66971666 | MS.gene069681:CDS |
| AGACTCAAGCTGAGATTCTT+AGG | 0.335479 | 6.1:-66969457 | MS.gene069681:CDS |
| GGTCTTGTTTACCCTGGTAT+TGG | 0.341297 | 6.1:-66970452 | MS.gene069681:CDS |
| TTCTAGATACGTGCGTGAAC+AGG | 0.356943 | 6.1:-66972837 | MS.gene069681:CDS |
| CGGAAATCCCATAGAAGATC+AGG | 0.359620 | 6.1:+66970518 | None:intergenic |
| AAGCTGAGATTCTTAGGTAT+TGG | 0.366104 | 6.1:-66969451 | MS.gene069681:CDS |
| TAACAAGAACTATGTTGATA+TGG | 0.366188 | 6.1:-66972553 | MS.gene069681:CDS |
| CTCGCAGCATCCACATGAAT+TGG | 0.372368 | 6.1:+66970569 | None:intergenic |
| GAGGCATAAAGCTGACTTGC+CGG | 0.372412 | 6.1:-66970417 | MS.gene069681:CDS |
| AGTCAGCGTTGAACCCAAAA+TGG | 0.376738 | 6.1:+66970664 | None:intergenic |
| AATGATGAGTTGATGTTAGA+TGG | 0.378531 | 6.1:-66972654 | MS.gene069681:CDS |
| CATCTATTCAATGCTCCTAT+TGG | 0.380720 | 6.1:-66971807 | MS.gene069681:CDS |
| TGGCTTCATTTGTTACTACT+TGG | 0.383718 | 6.1:-66972614 | MS.gene069681:CDS |
| TGTCCTCCGAGTGGTGATTA+GGG | 0.385035 | 6.1:-66969636 | MS.gene069681:CDS |
| ACCATTTCAACAGCTTTCAA+TGG | 0.408300 | 6.1:+66970713 | None:intergenic |
| AATATGCTACACAGGTTTGT+TGG | 0.409355 | 6.1:-66970808 | MS.gene069681:intron |
| ATATGCTACACAGGTTTGTT+GGG | 0.411704 | 6.1:-66970807 | MS.gene069681:intron |
| AAAATACGGGTGGATCGTTC+CGG | 0.414220 | 6.1:-66969693 | MS.gene069681:CDS |
| TTGTTTACCCTGGTATTGGT+TGG | 0.425703 | 6.1:-66970448 | MS.gene069681:CDS |
| AACGCTGACTGGAGAGTTTG+AGG | 0.427297 | 6.1:-66970651 | MS.gene069681:CDS |
| TGTTTACCCTGGTATTGGTT+GGG | 0.431991 | 6.1:-66970447 | MS.gene069681:CDS |
| TATTGGAAGAAGCTTGTTGA+TGG | 0.434589 | 6.1:-66969434 | MS.gene069681:CDS |
| GAGAAATTCAATGTGAAAGT+TGG | 0.439670 | 6.1:+66970353 | None:intergenic |
| AAGGAAGGAATTGAGAAAAC+AGG | 0.440850 | 6.1:-66969818 | MS.gene069681:CDS |
| TTCATTTGTTACTACTTGGA+TGG | 0.447228 | 6.1:-66972610 | MS.gene069681:CDS |
| GTACTTTGAGGTTGAGCTAA+AGG | 0.449977 | 6.1:-66970771 | MS.gene069681:CDS |
| TGGAAAACCAAGGCTTAACT+TGG | 0.451331 | 6.1:-66972634 | MS.gene069681:CDS |
| TTAGCTCCAGTAACTATGTT+AGG | 0.451511 | 6.1:+66971660 | None:intergenic |
| GCAGACCATCTGAGAAAATA+CGG | 0.454351 | 6.1:-66969707 | MS.gene069681:CDS |
| GCAGTTTCCTCTGCACCAAT+AGG | 0.455267 | 6.1:+66971792 | None:intergenic |
| GGAGGATTTCAGCTGTAGCT+TGG | 0.457484 | 6.1:-66969615 | MS.gene069681:CDS |
| TCTCTACCCTGATCTTCTAT+GGG | 0.463816 | 6.1:-66970525 | MS.gene069681:CDS |
| ACTATGTTAGGCTTATCATA+AGG | 0.466884 | 6.1:+66971672 | None:intergenic |
| CTTGTTGATGGCAAGAGAGT+TGG | 0.470062 | 6.1:-66969422 | MS.gene069681:CDS |
| AATGTTAGCGGTCACAAGTA+TGG | 0.472148 | 6.1:-66970473 | MS.gene069681:CDS |
| GTATTGGTTGGGTTGTTTGG+AGG | 0.473665 | 6.1:-66970436 | MS.gene069681:CDS |
| AATGAAGCCAAGTTAAGCCT+TGG | 0.475959 | 6.1:+66972627 | None:intergenic |
| AAAATTTGCCAGGTACTTTG+AGG | 0.476874 | 6.1:-66970783 | MS.gene069681:CDS |
| GCAGTAGGTGTTGGAACTGT+AGG | 0.480901 | 6.1:-66971771 | MS.gene069681:CDS |
| CAAGAGAGTTGGAGCATGCT+AGG | 0.485182 | 6.1:-66969411 | None:intergenic |
| CAAACAACCCAACCAATACC+AGG | 0.491052 | 6.1:+66970440 | None:intergenic |
| TCCATTGAAAGCTGTTGAAA+TGG | 0.494508 | 6.1:-66970714 | MS.gene069681:CDS |
| ATTTATACGGCTAGGCTTCG+AGG | 0.499173 | 6.1:-66970058 | MS.gene069681:intron |
| AAAATTGTCTCCAAGGACAT+AGG | 0.500052 | 6.1:-66969788 | MS.gene069681:CDS |
| ATGGGATTTCCGTTTGCCGT+TGG | 0.504123 | 6.1:-66970507 | MS.gene069681:CDS |
| ACCAGCCAGCATTATTGCCT+CGG | 0.506228 | 6.1:+66971743 | None:intergenic |
| AAGGTTTAAAATTGTCTCCA+AGG | 0.518110 | 6.1:-66969795 | MS.gene069681:CDS |
| GCTACTGTCTTTCAGAGAGA+AGG | 0.525070 | 6.1:+66969751 | None:intergenic |
| AAGTGGCACACCTATGTCCT+TGG | 0.530991 | 6.1:+66969778 | None:intergenic |
| GTCATCCGAGGCAATAATGC+TGG | 0.534312 | 6.1:-66971748 | MS.gene069681:CDS |
| TGAGTGTGATAAGCTTATCA+TGG | 0.535116 | 6.1:-66972583 | MS.gene069681:CDS |
| AGAAGATCAGGGTAGAGAAA+CGG | 0.536404 | 6.1:+66970530 | None:intergenic |
| GAGGAAACTGCAGTAGGTGT+TGG | 0.536508 | 6.1:-66971780 | MS.gene069681:CDS |
| TGCGTCTGCTGGCATTGTGT+AGG | 0.543361 | 6.1:+66969670 | None:intergenic |
| CAGTAGGTGTTGGAACTGTA+GGG | 0.543728 | 6.1:-66971770 | MS.gene069681:CDS |
| AAATGTGATGGAAAATTGCT+TGG | 0.550366 | 6.1:-66969858 | MS.gene069681:CDS |
| ACTAAGAAGAACAAGGAGAC+AGG | 0.550901 | 6.1:-66970602 | MS.gene069681:CDS |
| ACCTGAAGCTCAGTAGTGAC+AGG | 0.552304 | 6.1:+66972522 | None:intergenic |
| TTCAAAAGATGCTCATGTTG+CGG | 0.558105 | 6.1:-66969525 | MS.gene069681:CDS |
| TCCGAGGCAATAATGCTGGC+TGG | 0.559128 | 6.1:-66971744 | MS.gene069681:CDS |
| CACAGAGGATTACTATGTGA+TGG | 0.560082 | 6.1:-66970738 | MS.gene069681:CDS |
| TAGCTCAACCTCAAAGTACC+TGG | 0.560216 | 6.1:+66970775 | None:intergenic |
| AGAAGAACAAGGAGACAGGA+TGG | 0.561254 | 6.1:-66970598 | MS.gene069681:CDS |
| GTGAAAAGTATCAATGTTAG+CGG | 0.565895 | 6.1:-66970485 | MS.gene069681:CDS |
| TTCACATTGAATTTCTCCAA+AGG | 0.571801 | 6.1:-66970347 | MS.gene069681:intron |
| CAATGCTCCTATTGGTGCAG+AGG | 0.575155 | 6.1:-66971799 | MS.gene069681:CDS |
| TCTGCTGGCATTGTGTAGGC+CGG | 0.579437 | 6.1:+66969674 | None:intergenic |
| CAAAATGGCTGCAACACAGA+TGG | 0.582491 | 6.1:+66970679 | None:intergenic |
| GAAGAACAAGGAGACAGGAT+GGG | 0.586417 | 6.1:-66970597 | MS.gene069681:CDS |
| AGTTACTGGAGCTAATGTGC+AGG | 0.605359 | 6.1:-66971652 | MS.gene069681:intron |
| ATGATAAGCTTATCACACTC+AGG | 0.609818 | 6.1:+66972585 | None:intergenic |
| TCAACTGTCACACATCCAGA+TGG | 0.610258 | 6.1:-66972890 | MS.gene069681:CDS |
| AAGGAATTGAGAAAACAGGA+AGG | 0.618569 | 6.1:-66969814 | MS.gene069681:CDS |
| AAGTATGGTCTTGTTTACCC+TGG | 0.620033 | 6.1:-66970458 | MS.gene069681:CDS |
| TACTACCAATTTATACGGCT+AGG | 0.622133 | 6.1:-66970066 | MS.gene069681:CDS |
| TTCAGAGAGAAGGCAACAAG+TGG | 0.622295 | 6.1:+66969761 | None:intergenic |
| GGAAATCCCATAGAAGATCA+GGG | 0.625993 | 6.1:+66970519 | None:intergenic |
| CAGACCATCTGAGAAAATAC+GGG | 0.628218 | 6.1:-66969706 | MS.gene069681:CDS |
| CATGTGGATGCTGCGAGCGG+TGG | 0.629625 | 6.1:-66970563 | MS.gene069681:CDS |
| ATGGGATACTCCAATTCATG+TGG | 0.632127 | 6.1:-66970579 | MS.gene069681:CDS |
| CCTCCGAGTGGTGATTAGGG+AGG | 0.650942 | 6.1:-66969633 | MS.gene069681:CDS |
| GGTGCAGAGGAAACTGCAGT+AGG | 0.659345 | 6.1:-66971786 | MS.gene069681:CDS |
| ACCATCTGAGAAAATACGGG+TGG | 0.660633 | 6.1:-66969703 | MS.gene069681:CDS |
| AATCCTCCCTAATCACCACT+CGG | 0.661532 | 6.1:+66969630 | None:intergenic |
| GCTTCTTACTAAGAAGAACA+AGG | 0.681561 | 6.1:-66970609 | MS.gene069681:CDS |
| CAGACTAAGAGAAAATCAGA+AGG | 0.687264 | 6.1:-66971699 | MS.gene069681:CDS |
| GTGCTATTATATTCACACAC+CGG | 0.687463 | 6.1:+66971829 | None:intergenic |
| TGATGTTAGATGGAAAACCA+AGG | 0.691803 | 6.1:-66972644 | MS.gene069681:CDS |
| ATTCATGTGGATGCTGCGAG+CGG | 0.696037 | 6.1:-66970566 | MS.gene069681:CDS |
| TGGAACTGTAGGGTCATCCG+AGG | 0.696275 | 6.1:-66971760 | MS.gene069681:CDS |
| AAACAACCCAACCAATACCA+GGG | 0.700278 | 6.1:+66970441 | None:intergenic |
| ACACATCGCTGTCCTCCGAG+TGG | 0.704085 | 6.1:-66969645 | MS.gene069681:CDS |
| CCTCCCTAATCACCACTCGG+AGG | 0.723923 | 6.1:+66969633 | None:intergenic |
| TATCGCGAGTGAGACAAGCG+AGG | 0.724808 | 6.1:-66969501 | MS.gene069681:CDS |
| AAAGGAAGTGAAACTCACAG+AGG | 0.773932 | 6.1:-66970753 | MS.gene069681:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTTTTTATAATAATGT+CGG | - | chr6.1:66972361-66972380 | MS.gene069681:intron | 15.0% |
| !!! | TTATGAGTATATTTCTTTTT+AGG | + | chr6.1:66972152-66972171 | None:intergenic | 15.0% |
| !! | AATTATTATTGCACAGTAAA+AGG | - | chr6.1:66970094-66970113 | MS.gene069681:intron | 20.0% |
| !! | ATTATTATTGCACAGTAAAA+GGG | - | chr6.1:66970095-66970114 | MS.gene069681:intron | 20.0% |
| !! | CAATTCAATTCTTAAGTATA+TGG | - | chr6.1:66972072-66972091 | MS.gene069681:intron | 20.0% |
| !! | CTGTTACAATTTAAATATCT+TGG | - | chr6.1:66970370-66970389 | MS.gene069681:CDS | 20.0% |
| !! | TAACAAATGTTGAAAATATG+AGG | - | chr6.1:66971084-66971103 | MS.gene069681:intron | 20.0% |
| !! | TCAACTAAATATATTACCTT+TGG | + | chr6.1:66971986-66972005 | None:intergenic | 20.0% |
| !! | TCATAAATCATTGTAATGTT+TGG | - | chr6.1:66972166-66972185 | MS.gene069681:intron | 20.0% |
| !!! | AGTGTTTTTTTAAGGAAAAA+AGG | + | chr6.1:66969518-66969537 | None:intergenic | 20.0% |
| !!! | ATATGTTTATGTGTTGATAT+AGG | - | chr6.1:66969586-66969605 | MS.gene069681:CDS | 20.0% |
| !!! | GGGAAAATATCATTTTTAAT+TGG | - | chr6.1:66970240-66970259 | MS.gene069681:intron | 20.0% |
| !!! | TTGATCAAGATTTTGAATTA+TGG | - | chr6.1:66969837-66969856 | MS.gene069681:CDS | 20.0% |
| !!! | TTGTAAGTATCAAATTTTGA+GGG | + | chr6.1:66970273-66970292 | None:intergenic | 20.0% |
| !!! | TTTTTTAGATCTTTTGTGTT+TGG | - | chr6.1:66970297-66970316 | MS.gene069681:intron | 20.0% |
| ! | AAAGAAATACAAAGCAACAT+TGG | + | chr6.1:66972199-66972218 | None:intergenic | 25.0% |
| ! | AAGAAATACAAAGCAACATT+GGG | + | chr6.1:66972198-66972217 | None:intergenic | 25.0% |
| ! | CAATGTATGACAAAATTCAA+AGG | + | chr6.1:66972015-66972034 | None:intergenic | 25.0% |
| ! | CAGATAAATAAGTACACTTA+AGG | - | chr6.1:66970051-66970070 | MS.gene069681:intron | 25.0% |
| ! | CTCAATACTACCAATTTATA+CGG | - | chr6.1:66972243-66972262 | MS.gene069681:intron | 25.0% |
| ! | CTTAAGTGTACTTATTTATC+TGG | + | chr6.1:66970053-66970072 | None:intergenic | 25.0% |
| ! | GATAAAACATATTGTTCGTT+CGG | - | chr6.1:66970877-66970896 | MS.gene069681:intron | 25.0% |
| ! | GTATTATGTAATATAGTAGC+AGG | - | chr6.1:66970948-66970967 | MS.gene069681:intron | 25.0% |
| ! | TAACAAGAACTATGTTGATA+TGG | - | chr6.1:66969761-66969780 | MS.gene069681:CDS | 25.0% |
| ! | TATATGTCAAAATGAAGATG+AGG | + | chr6.1:66971066-66971085 | None:intergenic | 25.0% |
| ! | TATATTACATAATACCAGAG+AGG | + | chr6.1:66970943-66970962 | None:intergenic | 25.0% |
| ! | TTTCTCGACTAATGAAAATA+AGG | - | chr6.1:66972324-66972343 | MS.gene069681:intron | 25.0% |
| !! | ATTTTGTATTCTACCATACA+AGG | + | chr6.1:66971177-66971196 | None:intergenic | 25.0% |
| !! | CTTTGAATTTTGTCATACAT+TGG | - | chr6.1:66972013-66972032 | MS.gene069681:intron | 25.0% |
| !! | GTTGTAAGTATCAAATTTTG+AGG | + | chr6.1:66970274-66970293 | None:intergenic | 25.0% |
| !! | GTTTTTCACATCAATTATCT+TGG | - | chr6.1:66971928-66971947 | MS.gene069681:intron | 25.0% |
| !! | TACATCTAAAATCATGTTGA+GGG | + | chr6.1:66970809-66970828 | None:intergenic | 25.0% |
| !! | TCATGACTTGTAACTTATAT+TGG | - | chr6.1:66971366-66971385 | MS.gene069681:intron | 25.0% |
| !! | TCTTTTGAATTGATTGAACT+TGG | + | chr6.1:66972778-66972797 | None:intergenic | 25.0% |
| !!! | AAGTTGCTTTTTTGAAGAAA+GGG | - | chr6.1:66970220-66970239 | MS.gene069681:intron | 25.0% |
| !!! | AGCACAAAATTGCATTTTTT+TGG | + | chr6.1:66970838-66970857 | None:intergenic | 25.0% |
| !!! | GATCAAGACTTTTAAAGAAA+AGG | + | chr6.1:66970008-66970027 | None:intergenic | 25.0% |
| !!! | TGTTATTTTTCTTGCTCTAA+GGG | - | chr6.1:66972427-66972446 | MS.gene069681:intron | 25.0% |
| AAACTGTTTGAGAGAACTTA+CGG | - | chr6.1:66971304-66971323 | MS.gene069681:intron | 30.0% | |
| ACTATGTTAGGCTTATCATA+AGG | + | chr6.1:66970645-66970664 | None:intergenic | 30.0% | |
| AGAAAAAGTTGTGAATCTCT+TGG | - | chr6.1:66972744-66972763 | MS.gene069681:intron | 30.0% | |
| ATGTGAAAAACAAGATCATC+CGG | + | chr6.1:66971919-66971938 | None:intergenic | 30.0% | |
| CTTAGAGCAAGAAAAATAAC+AGG | + | chr6.1:66972428-66972447 | None:intergenic | 30.0% | |
| GAGAAATTCAATGTGAAAGT+TGG | + | chr6.1:66971964-66971983 | None:intergenic | 30.0% | |
| TTCACATTGAATTTCTCCAA+AGG | - | chr6.1:66971967-66971986 | MS.gene069681:intron | 30.0% | |
| TTTGTTCAATTATGCAGAAC+CGG | - | chr6.1:66970466-66970485 | MS.gene069681:CDS | 30.0% | |
| ! | AAATGTGATGGAAAATTGCT+TGG | - | chr6.1:66972456-66972475 | MS.gene069681:intron | 30.0% |
| ! | AACACAAAAATTCTGAAGGA+AGG | - | chr6.1:66972481-66972500 | MS.gene069681:intron | 30.0% |
| ! | AAGGTTTAAAATTGTCTCCA+AGG | - | chr6.1:66972519-66972538 | MS.gene069681:intron | 30.0% |
| ! | ACATTGATACTTTTCACCAA+CGG | + | chr6.1:66971826-66971845 | None:intergenic | 30.0% |
| ! | ATGTAGCTTTTGCAAAATCA+GGG | - | chr6.1:66969963-66969982 | MS.gene069681:intron | 30.0% |
| ! | ATTTTGCAAAAGCTACATCA+AGG | + | chr6.1:66969961-66969980 | None:intergenic | 30.0% |
| ! | GTACATCTAAAATCATGTTG+AGG | + | chr6.1:66970810-66970829 | None:intergenic | 30.0% |
| ! | TCTTTTGGTATAGAATTCTC+TGG | + | chr6.1:66969621-66969640 | None:intergenic | 30.0% |
| ! | TGCTTTGTATTTCTTTTGAC+AGG | - | chr6.1:66972203-66972222 | MS.gene069681:intron | 30.0% |
| ! | TTCATTTGTTACTACTTGGA+TGG | - | chr6.1:66969704-66969723 | MS.gene069681:CDS | 30.0% |
| ! | TTTAGATCTTTTGTGTTTGG+TGG | - | chr6.1:66970300-66970319 | MS.gene069681:intron | 30.0% |
| !! | AATGATGAGTTGATGTTAGA+TGG | - | chr6.1:66969660-66969679 | MS.gene069681:CDS | 30.0% |
| !! | GTAGTTCTGTATTTTCTTAG+AGG | - | chr6.1:66970770-66970789 | MS.gene069681:CDS | 30.0% |
| !! | GTGAAAAGTATCAATGTTAG+CGG | - | chr6.1:66971829-66971848 | MS.gene069681:CDS | 30.0% |
| !! | TCAGTACTTTCAAGTTTCAA+TGG | + | chr6.1:66970428-66970447 | None:intergenic | 30.0% |
| !! | TTGATCTTTGAAGCTTTGTT+TGG | - | chr6.1:66970022-66970041 | MS.gene069681:intron | 30.0% |
| !!! | ACACACACTTAGTTTTTTGT+TGG | - | chr6.1:66969540-66969559 | MS.gene069681:CDS | 30.0% |
| !!! | CAAGTTGCTTTTTTGAAGAA+AGG | - | chr6.1:66970219-66970238 | MS.gene069681:intron | 30.0% |
| !!! | CTGTTATTTTTCTTGCTCTA+AGG | - | chr6.1:66972426-66972445 | MS.gene069681:intron | 30.0% |
| !!! | GTGTGTGAAGTGTTTTTTTA+AGG | + | chr6.1:66969526-66969545 | None:intergenic | 30.0% |
| !!! | GTTTAGCTTTTAAAAGGAAG+TGG | - | chr6.1:66970592-66970611 | MS.gene069681:CDS | 30.0% |
| AAAATTGTCTCCAAGGACAT+AGG | - | chr6.1:66972526-66972545 | MS.gene069681:CDS | 35.0% | |
| AAAATTTGCCAGGTACTTTG+AGG | - | chr6.1:66971531-66971550 | MS.gene069681:intron | 35.0% | |
| AAGCTGAGATTCTTAGGTAT+TGG | - | chr6.1:66972863-66972882 | MS.gene069681:CDS | 35.0% | |
| AAGGAAGGAATTGAGAAAAC+AGG | - | chr6.1:66972496-66972515 | MS.gene069681:intron | 35.0% | |
| AAGGAATTGAGAAAACAGGA+AGG | - | chr6.1:66972500-66972519 | MS.gene069681:intron | 35.0% | |
| AATATGCTACACAGGTTTGT+TGG | - | chr6.1:66971506-66971525 | MS.gene069681:intron | 35.0% | |
| ACCATTTCAACAGCTTTCAA+TGG | + | chr6.1:66971604-66971623 | None:intergenic | 35.0% | |
| AGCAGAGAATGATAGTTTCA+GGG | + | chr6.1:66970199-66970218 | None:intergenic | 35.0% | |
| ATGATAAGCTTATCACACTC+AGG | + | chr6.1:66969732-66969751 | None:intergenic | 35.0% | |
| CAGACTAAGAGAAAATCAGA+AGG | - | chr6.1:66970615-66970634 | MS.gene069681:CDS | 35.0% | |
| CAGATAGGATCTTGATATTG+CGG | - | chr6.1:66969869-66969888 | MS.gene069681:CDS | 35.0% | |
| CATCTATTCAATGCTCCTAT+TGG | - | chr6.1:66970507-66970526 | MS.gene069681:CDS | 35.0% | |
| GATAAGCCTAACATAGTTAC+TGG | - | chr6.1:66970648-66970667 | MS.gene069681:CDS | 35.0% | |
| GATGAGGCAATAAATTTAGC+AGG | + | chr6.1:66971050-66971069 | None:intergenic | 35.0% | |
| GCTGTTTAAATATGCTACAC+AGG | - | chr6.1:66971498-66971517 | MS.gene069681:intron | 35.0% | |
| GCTTCTTACTAAGAAGAACA+AGG | - | chr6.1:66971705-66971724 | MS.gene069681:CDS | 35.0% | |
| GGAAAAAAGGACACTTACTT+AGG | + | chr6.1:66969505-66969524 | None:intergenic | 35.0% | |
| TAAGGGCTACAAAAATGTGA+TGG | - | chr6.1:66972444-66972463 | MS.gene069681:intron | 35.0% | |
| TACTACCAATTTATACGGCT+AGG | - | chr6.1:66972248-66972267 | MS.gene069681:intron | 35.0% | |
| TCCATTGAAAGCTGTTGAAA+TGG | - | chr6.1:66971600-66971619 | MS.gene069681:intron | 35.0% | |
| TGAGTGTGATAAGCTTATCA+TGG | - | chr6.1:66969731-66969750 | MS.gene069681:CDS | 35.0% | |
| TGATGTTAGATGGAAAACCA+AGG | - | chr6.1:66969670-66969689 | MS.gene069681:CDS | 35.0% | |
| TGTGTGGTTAAGAAATGTGT+TGG | - | chr6.1:66970909-66970928 | MS.gene069681:intron | 35.0% | |
| TTAGCTCCAGTAACTATGTT+AGG | + | chr6.1:66970657-66970676 | None:intergenic | 35.0% | |
| TTCAAAAGATGCTCATGTTG+CGG | - | chr6.1:66972789-66972808 | MS.gene069681:intron | 35.0% | |
| TTTGTTGGGAAAAATTTGCC+AGG | - | chr6.1:66971521-66971540 | MS.gene069681:intron | 35.0% | |
| ! | ATATGCTACACAGGTTTGTT+GGG | - | chr6.1:66971507-66971526 | MS.gene069681:intron | 35.0% |
| ! | ATCTAAAATCATGTTGAGGG+TGG | + | chr6.1:66970806-66970825 | None:intergenic | 35.0% |
| ! | ATCTGATATGCTGCATCTTT+TGG | + | chr6.1:66969636-66969655 | None:intergenic | 35.0% |
| ! | GATGTAGCTTTTGCAAAATC+AGG | - | chr6.1:66969962-66969981 | MS.gene069681:intron | 35.0% |
| ! | GCTGTAAAGAAGTACATTTC+TGG | - | chr6.1:66970855-66970874 | MS.gene069681:intron | 35.0% |
| ! | GTGCTATTATATTCACACAC+CGG | + | chr6.1:66970488-66970507 | None:intergenic | 35.0% |
| ! | GTTCTGTATTTTCTTAGAGG+CGG | - | chr6.1:66970773-66970792 | MS.gene069681:CDS | 35.0% |
| ! | TCTAAAATCATGTTGAGGGT+GGG | + | chr6.1:66970805-66970824 | None:intergenic | 35.0% |
| ! | TGGCTTCATTTGTTACTACT+TGG | - | chr6.1:66969700-66969719 | MS.gene069681:CDS | 35.0% |
| ! | TTGGTGGTTGGATGAAAATT+TGG | - | chr6.1:66970316-66970335 | MS.gene069681:intron | 35.0% |
| !! | TATTGGAAGAAGCTTGTTGA+TGG | - | chr6.1:66972880-66972899 | MS.gene069681:CDS | 35.0% |
| !!! | TGGCTGGTTTAGCTTTTAAA+AGG | - | chr6.1:66970586-66970605 | MS.gene069681:CDS | 35.0% |
| AAACAACCCAACCAATACCA+GGG | + | chr6.1:66971876-66971895 | None:intergenic | 40.0% | |
| AAAGGAAGTGAAACTCACAG+AGG | - | chr6.1:66971561-66971580 | MS.gene069681:intron | 40.0% | |
| AATGAAGCCAAGTTAAGCCT+TGG | + | chr6.1:66969690-66969709 | None:intergenic | 40.0% | |
| AATGTTAGCGGTCACAAGTA+TGG | - | chr6.1:66971841-66971860 | MS.gene069681:intron | 40.0% | |
| ACTAAGAAGAACAAGGAGAC+AGG | - | chr6.1:66971712-66971731 | MS.gene069681:CDS | 40.0% | |
| AGAAGATCAGGGTAGAGAAA+CGG | + | chr6.1:66971787-66971806 | None:intergenic | 40.0% | |
| AGACTCAAGCTGAGATTCTT+AGG | - | chr6.1:66972857-66972876 | MS.gene069681:CDS | 40.0% | |
| AGAGGAAACAAAGCATGAGA+CGG | + | chr6.1:66971112-66971131 | None:intergenic | 40.0% | |
| ATGGGATACTCCAATTCATG+TGG | - | chr6.1:66971735-66971754 | MS.gene069681:CDS | 40.0% | |
| ATGTTTCACAGCGAGTTTGT+TGG | - | chr6.1:66969920-66969939 | MS.gene069681:intron | 40.0% | |
| CACAGAGGATTACTATGTGA+TGG | - | chr6.1:66971576-66971595 | MS.gene069681:intron | 40.0% | |
| CACCCTAAACTAAAGCAGAA+AGG | + | chr6.1:66971238-66971257 | None:intergenic | 40.0% | |
| CAGACCATCTGAGAAAATAC+GGG | - | chr6.1:66972608-66972627 | MS.gene069681:CDS | 40.0% | |
| CTAAAATCATGTTGAGGGTG+GGG | + | chr6.1:66970804-66970823 | None:intergenic | 40.0% | |
| CTCTCAAACAGTTTCACAAG+TGG | + | chr6.1:66971298-66971317 | None:intergenic | 40.0% | |
| GAGCAGAGAATGATAGTTTC+AGG | + | chr6.1:66970200-66970219 | None:intergenic | 40.0% | |
| GAGCTATCATAGAGAGCTTA+TGG | + | chr6.1:66971348-66971367 | None:intergenic | 40.0% | |
| GCAGACCATCTGAGAAAATA+CGG | - | chr6.1:66972607-66972626 | MS.gene069681:CDS | 40.0% | |
| GGAAATCCCATAGAAGATCA+GGG | + | chr6.1:66971798-66971817 | None:intergenic | 40.0% | |
| GGCGAACACAAAAATTCTGA+AGG | - | chr6.1:66972477-66972496 | MS.gene069681:intron | 40.0% | |
| TAAAGAAAAGGCCTGCATCA+GGG | + | chr6.1:66969996-66970015 | None:intergenic | 40.0% | |
| TCTCTACCCTGATCTTCTAT+GGG | - | chr6.1:66971789-66971808 | MS.gene069681:CDS | 40.0% | |
| TGGAAAACCAAGGCTTAACT+TGG | - | chr6.1:66969680-66969699 | MS.gene069681:CDS | 40.0% | |
| TGTTGGAGAAAATTCCTCTC+TGG | - | chr6.1:66970926-66970945 | MS.gene069681:intron | 40.0% | |
| TTAAACAGCGTCAAACATCG+AGG | + | chr6.1:66971487-66971506 | None:intergenic | 40.0% | |
| TTAAAGAAAAGGCCTGCATC+AGG | + | chr6.1:66969997-66970016 | None:intergenic | 40.0% | |
| TTCTCTACCCTGATCTTCTA+TGG | - | chr6.1:66971788-66971807 | MS.gene069681:CDS | 40.0% | |
| ! | ATGTTCTCGTTTTGTCCATC+TGG | + | chr6.1:66969442-66969461 | None:intergenic | 40.0% |
| ! | CGCCTTTCTGCTTTAGTTTA+GGG | - | chr6.1:66971233-66971252 | MS.gene069681:intron | 40.0% |
| ! | TACTTTTCACCAACGGCAAA+CGG | + | chr6.1:66971819-66971838 | None:intergenic | 40.0% |
| !! | AAGTATGGTCTTGTTTACCC+TGG | - | chr6.1:66971856-66971875 | MS.gene069681:intron | 40.0% |
| !! | ATCTGTGTTGCAGCCATTTT+GGG | - | chr6.1:66971637-66971656 | MS.gene069681:intron | 40.0% |
| !! | GATCTTTTGTGTTTGGTGGT+TGG | - | chr6.1:66970304-66970323 | MS.gene069681:intron | 40.0% |
| !! | GTACTTTGAGGTTGAGCTAA+AGG | - | chr6.1:66971543-66971562 | MS.gene069681:intron | 40.0% |
| !! | TGTTTACCCTGGTATTGGTT+GGG | - | chr6.1:66971867-66971886 | MS.gene069681:intron | 40.0% |
| !! | TTGTTTACCCTGGTATTGGT+TGG | - | chr6.1:66971866-66971885 | MS.gene069681:intron | 40.0% |
| AAAATACGGGTGGATCGTTC+CGG | - | chr6.1:66972621-66972640 | MS.gene069681:CDS | 45.0% | |
| AATCCTCCCTAATCACCACT+CGG | + | chr6.1:66972687-66972706 | None:intergenic | 45.0% | |
| ACCATCTGAGAAAATACGGG+TGG | - | chr6.1:66972611-66972630 | MS.gene069681:CDS | 45.0% | |
| AGAAGAACAAGGAGACAGGA+TGG | - | chr6.1:66971716-66971735 | MS.gene069681:CDS | 45.0% | |
| AGGAAACAAAGCATGAGACG+GGG | + | chr6.1:66971110-66971129 | None:intergenic | 45.0% | |
| AGTTACTGGAGCTAATGTGC+AGG | - | chr6.1:66970662-66970681 | MS.gene069681:CDS | 45.0% | |
| ATTTATACGGCTAGGCTTCG+AGG | - | chr6.1:66972256-66972275 | MS.gene069681:intron | 45.0% | |
| CAAAATGGCTGCAACACAGA+TGG | + | chr6.1:66971638-66971657 | None:intergenic | 45.0% | |
| CAAACAACCCAACCAATACC+AGG | + | chr6.1:66971877-66971896 | None:intergenic | 45.0% | |
| CAAACATCGAGGTCTCTGTT+TGG | + | chr6.1:66971476-66971495 | None:intergenic | 45.0% | |
| CGAAGCCTAGCCGTATAAAT+TGG | + | chr6.1:66972256-66972275 | None:intergenic | 45.0% | |
| CGGAAATCCCATAGAAGATC+AGG | + | chr6.1:66971799-66971818 | None:intergenic | 45.0% | |
| CTATGTACGTTGTGGATGAG+TGG | + | chr6.1:66971027-66971046 | None:intergenic | 45.0% | |
| GAAGAACAAGGAGACAGGAT+GGG | - | chr6.1:66971717-66971736 | MS.gene069681:CDS | 45.0% | |
| GAGGAAACAAAGCATGAGAC+GGG | + | chr6.1:66971111-66971130 | None:intergenic | 45.0% | |
| GCTACTGTCTTTCAGAGAGA+AGG | + | chr6.1:66972566-66972585 | None:intergenic | 45.0% | |
| GTCTGACCTTACCTTTGAGT+CGG | + | chr6.1:66970975-66970994 | None:intergenic | 45.0% | |
| TCAACTGTCACACATCCAGA+TGG | - | chr6.1:66969424-66969443 | MS.gene069681:CDS | 45.0% | |
| TCTGACCTTACCTTTGAGTC+GGG | + | chr6.1:66970974-66970993 | None:intergenic | 45.0% | |
| TTAGCAGGCTATGTACGTTG+TGG | + | chr6.1:66971035-66971054 | None:intergenic | 45.0% | |
| TTATGGTTGCGATCGCAGAT+AGG | - | chr6.1:66969854-66969873 | MS.gene069681:CDS | 45.0% | |
| TTCAGAGAGAAGGCAACAAG+TGG | + | chr6.1:66972556-66972575 | None:intergenic | 45.0% | |
| TTCTAGATACGTGCGTGAAC+AGG | - | chr6.1:66969477-66969496 | MS.gene069681:CDS | 45.0% | |
| ! | AGTCAGCGTTGAACCCAAAA+TGG | + | chr6.1:66971653-66971672 | None:intergenic | 45.0% |
| ! | CATCTGTGTTGCAGCCATTT+TGG | - | chr6.1:66971636-66971655 | MS.gene069681:intron | 45.0% |
| ! | GCGCCTTTCTGCTTTAGTTT+AGG | - | chr6.1:66971232-66971251 | MS.gene069681:intron | 45.0% |
| ! | TAGCTCAACCTCAAAGTACC+TGG | + | chr6.1:66971542-66971561 | None:intergenic | 45.0% |
| ! | TCCACCCGTATTTTCTCAGA+TGG | + | chr6.1:66972615-66972634 | None:intergenic | 45.0% |
| !! | CAGTAGGTGTTGGAACTGTA+GGG | - | chr6.1:66970544-66970563 | MS.gene069681:CDS | 45.0% |
| !! | CTCATGCTTTGTTTCCTCTG+AGG | - | chr6.1:66971113-66971132 | MS.gene069681:intron | 45.0% |
| !! | CTGGTATTGGTTGGGTTGTT+TGG | - | chr6.1:66971875-66971894 | MS.gene069681:intron | 45.0% |
| !! | CTTGTTGATGGCAAGAGAGT+TGG | - | chr6.1:66972892-66972911 | MS.gene069681:CDS | 45.0% |
| !! | GGTCTTGTTTACCCTGGTAT+TGG | - | chr6.1:66971862-66971881 | MS.gene069681:intron | 45.0% |
| !! | GTATTGGTTGGGTTGTTTGG+AGG | - | chr6.1:66971878-66971897 | MS.gene069681:intron | 45.0% |
| !!! | ATTTTGGGTTCAACGCTGAC+TGG | - | chr6.1:66971652-66971671 | MS.gene069681:intron | 45.0% |
| AAGTGGCACACCTATGTCCT+TGG | + | chr6.1:66972539-66972558 | None:intergenic | 50.0% | |
| ACCAGCCAGCATTATTGCCT+CGG | + | chr6.1:66970574-66970593 | None:intergenic | 50.0% | |
| ACCTGAAGCTCAGTAGTGAC+AGG | + | chr6.1:66969795-66969814 | None:intergenic | 50.0% | |
| AGGCTGAAGGCCTAAAGCAA+GGG | + | chr6.1:66971001-66971020 | None:intergenic | 50.0% | |
| ATGGGATTTCCGTTTGCCGT+TGG | - | chr6.1:66971807-66971826 | MS.gene069681:CDS | 50.0% | |
| ATTCATGTGGATGCTGCGAG+CGG | - | chr6.1:66971748-66971767 | MS.gene069681:CDS | 50.0% | |
| CAATGCTCCTATTGGTGCAG+AGG | - | chr6.1:66970515-66970534 | MS.gene069681:CDS | 50.0% | |
| CGTTCGGACAGAAACATGTG+TGG | - | chr6.1:66970893-66970912 | MS.gene069681:intron | 50.0% | |
| CTCGCAGCATCCACATGAAT+TGG | + | chr6.1:66971748-66971767 | None:intergenic | 50.0% | |
| GACTGCATGCTCACTTCGAT+AGG | - | chr6.1:66970742-66970761 | MS.gene069681:CDS | 50.0% | |
| GAGGAAACTGCAGTAGGTGT+TGG | - | chr6.1:66970534-66970553 | MS.gene069681:CDS | 50.0% | |
| GCAATGTGAGGCCTAAAGCT+AGG | + | chr6.1:66971144-66971163 | None:intergenic | 50.0% | |
| GCAGTTTCCTCTGCACCAAT+AGG | + | chr6.1:66970525-66970544 | None:intergenic | 50.0% | |
| GGAGGATTTCAGCTGTAGCT+TGG | - | chr6.1:66972699-66972718 | MS.gene069681:CDS | 50.0% | |
| GTCATCCGAGGCAATAATGC+TGG | - | chr6.1:66970566-66970585 | MS.gene069681:CDS | 50.0% | |
| TAGGCTGAAGGCCTAAAGCA+AGG | + | chr6.1:66971002-66971021 | None:intergenic | 50.0% | |
| TCCTGTCACTACTGAGCTTC+AGG | - | chr6.1:66969791-66969810 | MS.gene069681:CDS | 50.0% | |
| TGTCCTCCGAGTGGTGATTA+GGG | - | chr6.1:66972678-66972697 | MS.gene069681:CDS | 50.0% | |
| TTTAGGCCTCACATTGCCTG+CGG | - | chr6.1:66971147-66971166 | MS.gene069681:intron | 50.0% | |
| ! | AACGCTGACTGGAGAGTTTG+AGG | - | chr6.1:66971663-66971682 | MS.gene069681:CDS | 50.0% |
| ! | ACGTTGTGGATGAGTGGACT+AGG | + | chr6.1:66971021-66971040 | None:intergenic | 50.0% |
| !! | GAGGCATAAAGCTGACTTGC+CGG | - | chr6.1:66971897-66971916 | MS.gene069681:intron | 50.0% |
| !! | GCAGTAGGTGTTGGAACTGT+AGG | - | chr6.1:66970543-66970562 | MS.gene069681:CDS | 50.0% |
| AGAAAAGGCCTGCATCAGGG+TGG | + | chr6.1:66969993-66970012 | None:intergenic | 55.0% | |
| CTGTCCTCCGAGTGGTGATT+AGG | - | chr6.1:66972677-66972696 | MS.gene069681:CDS | 55.0% | |
| GGTGCAGAGGAAACTGCAGT+AGG | - | chr6.1:66970528-66970547 | MS.gene069681:CDS | 55.0% | |
| GTCAGACGAGCCCTTGCTTT+AGG | - | chr6.1:66970988-66971007 | MS.gene069681:intron | 55.0% | |
| TAGTAGCAGGCCCGACTCAA+AGG | - | chr6.1:66970961-66970980 | MS.gene069681:intron | 55.0% | |
| TATCGCGAGTGAGACAAGCG+AGG | - | chr6.1:66972813-66972832 | MS.gene069681:intron | 55.0% | |
| TCCGAGGCAATAATGCTGGC+TGG | - | chr6.1:66970570-66970589 | MS.gene069681:CDS | 55.0% | |
| TCTGCTGGCATTGTGTAGGC+CGG | + | chr6.1:66972643-66972662 | None:intergenic | 55.0% | |
| TGCGTCTGCTGGCATTGTGT+AGG | + | chr6.1:66972647-66972666 | None:intergenic | 55.0% | |
| TGGAACTGTAGGGTCATCCG+AGG | - | chr6.1:66970554-66970573 | MS.gene069681:CDS | 55.0% | |
| ! | AAAGCTAGGTGTCGCCTCAG+AGG | + | chr6.1:66971130-66971149 | None:intergenic | 55.0% |
| ! | CTGAGGCGACACCTAGCTTT+AGG | - | chr6.1:66971130-66971149 | MS.gene069681:intron | 55.0% |
| ! | GCGATGTGTTTTGCGTCTGC+TGG | + | chr6.1:66972658-66972677 | None:intergenic | 55.0% |
| !! | GGATGAGTGGACTAGGCTGA+AGG | + | chr6.1:66971014-66971033 | None:intergenic | 55.0% |
| ACACATCGCTGTCCTCCGAG+TGG | - | chr6.1:66972669-66972688 | MS.gene069681:CDS | 60.0% | |
| CCTCCCTAATCACCACTCGG+AGG | + | chr6.1:66972684-66972703 | None:intergenic | 60.0% | |
| CCTCCGAGTGGTGATTAGGG+AGG | - | chr6.1:66972681-66972700 | MS.gene069681:CDS | 60.0% | |
| GCAGGCCCGACTCAAAGGTA+AGG | - | chr6.1:66970966-66970985 | MS.gene069681:intron | 60.0% | |
| TACCATACAAGGCCGACCGC+AGG | + | chr6.1:66971166-66971185 | None:intergenic | 60.0% | |
| AGGGTGAGCCACCCTGATGC+AGG | - | chr6.1:66969982-66970001 | MS.gene069681:intron | 65.0% | |
| CATGTGGATGCTGCGAGCGG+TGG | - | chr6.1:66971751-66971770 | MS.gene069681:CDS | 65.0% | |
| GGCCTCACATTGCCTGCGGT+CGG | - | chr6.1:66971151-66971170 | MS.gene069681:intron | 65.0% | |
| ! | TGCCTGCGGTCGGCCTTGTA+TGG | - | chr6.1:66971161-66971180 | MS.gene069681:intron | 65.0% |
| GGCCGACCGCAGGCAATGTG+AGG | + | chr6.1:66971156-66971175 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 66969412 | 66972924 | 66969412 | ID=MS.gene069681 |
| chr6.1 | mRNA | 66969412 | 66972924 | 66969412 | ID=MS.gene069681.t1;Parent=MS.gene069681 |
| chr6.1 | exon | 66972830 | 66972924 | 66972830 | ID=MS.gene069681.t1.exon1;Parent=MS.gene069681.t1 |
| chr6.1 | CDS | 66972830 | 66972924 | 66972830 | ID=cds.MS.gene069681.t1;Parent=MS.gene069681.t1 |
| chr6.1 | exon | 66972524 | 66972728 | 66972524 | ID=MS.gene069681.t1.exon2;Parent=MS.gene069681.t1 |
| chr6.1 | CDS | 66972524 | 66972728 | 66972524 | ID=cds.MS.gene069681.t1;Parent=MS.gene069681.t1 |
| chr6.1 | exon | 66971653 | 66971853 | 66971653 | ID=MS.gene069681.t1.exon3;Parent=MS.gene069681.t1 |
| chr6.1 | CDS | 66971653 | 66971853 | 66971653 | ID=cds.MS.gene069681.t1;Parent=MS.gene069681.t1 |
| chr6.1 | exon | 66970348 | 66970816 | 66970348 | ID=MS.gene069681.t1.exon4;Parent=MS.gene069681.t1 |
| chr6.1 | CDS | 66970348 | 66970816 | 66970348 | ID=cds.MS.gene069681.t1;Parent=MS.gene069681.t1 |
| chr6.1 | exon | 66970059 | 66970111 | 66970059 | ID=MS.gene069681.t1.exon5;Parent=MS.gene069681.t1 |
| chr6.1 | CDS | 66970059 | 66970111 | 66970059 | ID=cds.MS.gene069681.t1;Parent=MS.gene069681.t1 |
| chr6.1 | exon | 66969412 | 66969888 | 66969412 | ID=MS.gene069681.t1.exon6;Parent=MS.gene069681.t1 |
| chr6.1 | CDS | 66969412 | 66969888 | 66969412 | ID=cds.MS.gene069681.t1;Parent=MS.gene069681.t1 |
| Gene Sequence |
| Protein sequence |
