Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50575.t1 | XP_013468583.1 | 94.9 | 236 | 11 | 1 | 3 | 237 | 4 | 239 | 1.70E-112 | 415.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50575.t1 | P13089 | 70.6 | 245 | 52 | 9 | 12 | 242 | 1 | 239 | 8.7e-78 | 291.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50575.t1 | B7FGL7 | 94.9 | 236 | 11 | 1 | 3 | 237 | 4 | 239 | 1.2e-112 | 415.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene50575.t1 | TR | AUX/IAA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene50575 | 0.815911 | 7.25E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene50575 | 0.813854 | 2.07E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene50575 | 0.808646 | 2.80E-50 | -1.69E-46 |
| MS.gene049346 | MS.gene50575 | 0.865022 | 7.98E-65 | -1.69E-46 |
| MS.gene049356 | MS.gene50575 | 0.83254 | 8.92E-56 | -1.69E-46 |
| MS.gene049369 | MS.gene50575 | 0.815798 | 7.69E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene50575 | 0.831122 | 2.00E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene50575 | 0.817179 | 3.77E-52 | -1.69E-46 |
| MS.gene049662 | MS.gene50575 | 0.817716 | 2.85E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene50575 | 0.818505 | 1.89E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene50575 | 0.857693 | 1.37E-62 | -1.69E-46 |
| MS.gene049907 | MS.gene50575 | 0.802387 | 5.75E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene50575 | 0.826648 | 2.42E-54 | -1.69E-46 |
| MS.gene049915 | MS.gene50575 | 0.800387 | 1.48E-48 | -1.69E-46 |
| MS.gene050076 | MS.gene50575 | 0.808419 | 3.13E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene50575 | 0.852595 | 4.16E-61 | -1.69E-46 |
| MS.gene050301 | MS.gene50575 | 0.871787 | 5.24E-67 | -1.69E-46 |
| MS.gene050397 | MS.gene50575 | 0.828897 | 6.96E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene50575 | 0.851706 | 7.45E-61 | -1.69E-46 |
| MS.gene050670 | MS.gene50575 | 0.827484 | 1.53E-54 | -1.69E-46 |
| MS.gene050900 | MS.gene50575 | 0.824793 | 6.66E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene50575 | 0.832596 | 8.64E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene50575 | 0.841157 | 5.63E-58 | -1.69E-46 |
| MS.gene051255 | MS.gene50575 | 0.813152 | 2.96E-51 | -1.69E-46 |
| MS.gene051360 | MS.gene50575 | 0.833509 | 5.12E-56 | -1.69E-46 |
| MS.gene051525 | MS.gene50575 | 0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene50575 | 0.803382 | 3.58E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene50575 | 0.82493 | 6.18E-54 | -1.69E-46 |
| MS.gene052077 | MS.gene50575 | 0.800063 | 1.72E-48 | -1.69E-46 |
| MS.gene052078 | MS.gene50575 | 0.827591 | 1.44E-54 | -1.69E-46 |
| MS.gene052178 | MS.gene50575 | 0.837637 | 4.62E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene50575 | 0.85663 | 2.83E-62 | -1.69E-46 |
| MS.gene052207 | MS.gene50575 | 0.834556 | 2.80E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene50575 | 0.842438 | 2.59E-58 | -1.69E-46 |
| MS.gene052287 | MS.gene50575 | 0.846413 | 2.21E-59 | -1.69E-46 |
| MS.gene052310 | MS.gene50575 | 0.839645 | 1.40E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene50575 | 0.879379 | 1.31E-69 | -1.69E-46 |
| MS.gene052485 | MS.gene50575 | 0.860183 | 2.47E-63 | -1.69E-46 |
| MS.gene053073 | MS.gene50575 | 0.813088 | 3.06E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene50575 | 0.808862 | 2.51E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene50575 | 0.862282 | 5.66E-64 | -1.69E-46 |
| MS.gene053449 | MS.gene50575 | 0.810164 | 1.32E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene50575 | 0.838638 | 2.55E-57 | -1.69E-46 |
| MS.gene053813 | MS.gene50575 | 0.83956 | 1.47E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene50575 | 0.852865 | 3.49E-61 | -1.69E-46 |
| MS.gene053928 | MS.gene50575 | 0.810048 | 1.40E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene50575 | 0.843523 | 1.33E-58 | -1.69E-46 |
| MS.gene054011 | MS.gene50575 | 0.832394 | 9.69E-56 | -1.69E-46 |
| MS.gene054012 | MS.gene50575 | 0.829629 | 4.63E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene50575 | 0.833652 | 4.72E-56 | -1.69E-46 |
| MS.gene054123 | MS.gene50575 | 0.804772 | 1.84E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene50575 | 0.802372 | 5.79E-49 | -1.69E-46 |
| MS.gene054185 | MS.gene50575 | 0.805074 | 1.59E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene50575 | 0.815788 | 7.73E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene50575 | 0.804911 | 1.72E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene50575 | 0.835048 | 2.11E-56 | -1.69E-46 |
| MS.gene054542 | MS.gene50575 | 0.825767 | 3.92E-54 | -1.69E-46 |
| MS.gene054556 | MS.gene50575 | 0.800539 | 1.37E-48 | -1.69E-46 |
| MS.gene05455 | MS.gene50575 | 0.815297 | 9.94E-52 | -1.69E-46 |
| MS.gene054618 | MS.gene50575 | 0.8146 | 1.42E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene50575 | 0.877451 | 6.22E-69 | -1.69E-46 |
| MS.gene055277 | MS.gene50575 | 0.859661 | 3.55E-63 | -1.69E-46 |
| MS.gene055390 | MS.gene50575 | 0.834465 | 2.95E-56 | -1.69E-46 |
| MS.gene055422 | MS.gene50575 | 0.839841 | 1.24E-57 | -1.69E-46 |
| MS.gene055428 | MS.gene50575 | 0.828569 | 8.36E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene50575 | 0.812216 | 4.74E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene50575 | 0.841842 | 3.72E-58 | -1.69E-46 |
| MS.gene055666 | MS.gene50575 | 0.826177 | 3.13E-54 | -1.69E-46 |
| MS.gene055859 | MS.gene50575 | 0.803404 | 3.54E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene50575 | 0.885459 | 7.99E-72 | -1.69E-46 |
| MS.gene056314 | MS.gene50575 | 0.809139 | 2.19E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene50575 | 0.841733 | 3.97E-58 | -1.69E-46 |
| MS.gene056410 | MS.gene50575 | 0.839594 | 1.44E-57 | -1.69E-46 |
| MS.gene056511 | MS.gene50575 | 0.805602 | 1.23E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene50575 | 0.815029 | 1.14E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene50575 | 0.81962 | 1.06E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene50575 | 0.814545 | 1.46E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene50575 | 0.822012 | 2.97E-53 | -1.69E-46 |
| MS.gene056931 | MS.gene50575 | 0.822915 | 1.83E-53 | -1.69E-46 |
| MS.gene056933 | MS.gene50575 | 0.820432 | 6.88E-53 | -1.69E-46 |
| MS.gene056935 | MS.gene50575 | 0.802988 | 4.32E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene50575 | 0.855302 | 6.91E-62 | -1.69E-46 |
| MS.gene057330 | MS.gene50575 | 0.810628 | 1.05E-50 | -1.69E-46 |
| MS.gene05733 | MS.gene50575 | 0.811825 | 5.77E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene50575 | 0.862185 | 6.06E-64 | -1.69E-46 |
| MS.gene057449 | MS.gene50575 | 0.847357 | 1.22E-59 | -1.69E-46 |
| MS.gene057450 | MS.gene50575 | 0.865871 | 4.31E-65 | -1.69E-46 |
| MS.gene057469 | MS.gene50575 | 0.827306 | 1.68E-54 | -1.69E-46 |
| MS.gene057749 | MS.gene50575 | 0.832625 | 8.49E-56 | -1.69E-46 |
| MS.gene057779 | MS.gene50575 | 0.802446 | 5.59E-49 | -1.69E-46 |
| MS.gene057782 | MS.gene50575 | 0.815304 | 9.90E-52 | -1.69E-46 |
| MS.gene057796 | MS.gene50575 | 0.837001 | 6.72E-57 | -1.69E-46 |
| MS.gene057823 | MS.gene50575 | 0.827977 | 1.16E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene50575 | 0.865824 | 4.46E-65 | -1.69E-46 |
| MS.gene058007 | MS.gene50575 | 0.80556 | 1.26E-49 | -1.69E-46 |
| MS.gene058082 | MS.gene50575 | 0.800565 | 1.36E-48 | -1.69E-46 |
| MS.gene05811 | MS.gene50575 | 0.879362 | 1.33E-69 | -1.69E-46 |
| MS.gene058293 | MS.gene50575 | 0.82241 | 2.40E-53 | -1.69E-46 |
| MS.gene058365 | MS.gene50575 | 0.812462 | 4.19E-51 | -1.69E-46 |
| MS.gene05842 | MS.gene50575 | 0.822447 | 2.36E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene50575 | 0.840244 | 9.77E-58 | -1.69E-46 |
| MS.gene058700 | MS.gene50575 | 0.801532 | 8.61E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene50575 | 0.825769 | 3.91E-54 | -1.69E-46 |
| MS.gene058949 | MS.gene50575 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene058995 | MS.gene50575 | 0.807008 | 6.23E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene50575 | 0.865224 | 6.89E-65 | -1.69E-46 |
| MS.gene059082 | MS.gene50575 | 0.804901 | 1.73E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene50575 | 0.804359 | 2.24E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene50575 | 0.840676 | 7.53E-58 | -1.69E-46 |
| MS.gene059366 | MS.gene50575 | 0.822944 | 1.81E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene50575 | 0.839052 | 1.99E-57 | -1.69E-46 |
| MS.gene059421 | MS.gene50575 | 0.813209 | 2.87E-51 | -1.69E-46 |
| MS.gene059462 | MS.gene50575 | 0.815975 | 7.02E-52 | -1.69E-46 |
| MS.gene059518 | MS.gene50575 | 0.837873 | 4.02E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene50575 | 0.844792 | 6.07E-59 | -1.69E-46 |
| MS.gene059674 | MS.gene50575 | 0.804834 | 1.79E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene50575 | 0.835689 | 1.45E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene50575 | 0.878603 | 2.46E-69 | -1.69E-46 |
| MS.gene059692 | MS.gene50575 | 0.890913 | 6.41E-74 | -1.69E-46 |
| MS.gene059695 | MS.gene50575 | 0.890436 | 9.87E-74 | -1.69E-46 |
| MS.gene059711 | MS.gene50575 | 0.837203 | 5.97E-57 | -1.69E-46 |
| MS.gene059807 | MS.gene50575 | 0.841565 | 4.40E-58 | -1.69E-46 |
| MS.gene05984 | MS.gene50575 | 0.847956 | 8.33E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene50575 | 0.843505 | 1.35E-58 | -1.69E-46 |
| MS.gene059974 | MS.gene50575 | 0.871308 | 7.55E-67 | -1.69E-46 |
| MS.gene060005 | MS.gene50575 | 0.83572 | 1.42E-56 | -1.69E-46 |
| MS.gene060247 | MS.gene50575 | 0.81148 | 6.86E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene50575 | 0.881734 | 1.88E-70 | -1.69E-46 |
| MS.gene060403 | MS.gene50575 | 0.81412 | 1.81E-51 | -1.69E-46 |
| MS.gene060495 | MS.gene50575 | 0.806616 | 7.54E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene50575 | 0.821618 | 3.67E-53 | -1.69E-46 |
| MS.gene060569 | MS.gene50575 | 0.819275 | 1.27E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene50575 | 0.831357 | 1.75E-55 | -1.69E-46 |
| MS.gene060986 | MS.gene50575 | 0.827907 | 1.21E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene50575 | 0.88925 | 2.87E-73 | -1.69E-46 |
| MS.gene061051 | MS.gene50575 | -0.850437 | 1.70E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene50575 | 0.818804 | 1.62E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene50575 | 0.804686 | 1.92E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50575.t1 | MTR_1g070520 | 95.339 | 236 | 10 | 1 | 3 | 237 | 4 | 239 | 1.40e-165 | 457 |
| MS.gene50575.t1 | MTR_7g096090 | 68.000 | 250 | 61 | 7 | 1 | 237 | 1 | 244 | 1.30e-99 | 291 |
| MS.gene50575.t1 | MTR_1g093240 | 63.830 | 235 | 60 | 7 | 14 | 237 | 10 | 230 | 5.20e-88 | 261 |
| MS.gene50575.t1 | MTR_1g093240 | 64.629 | 229 | 56 | 7 | 14 | 231 | 10 | 224 | 2.20e-87 | 259 |
| MS.gene50575.t1 | MTR_1g080860 | 61.765 | 238 | 70 | 6 | 14 | 237 | 17 | 247 | 6.00e-84 | 251 |
| MS.gene50575.t1 | MTR_1g080860 | 62.500 | 232 | 66 | 6 | 14 | 231 | 17 | 241 | 3.19e-83 | 249 |
| MS.gene50575.t1 | MTR_1g093240 | 62.679 | 209 | 53 | 7 | 14 | 211 | 10 | 204 | 1.53e-73 | 223 |
| MS.gene50575.t1 | MTR_5g067350 | 63.190 | 163 | 54 | 4 | 83 | 245 | 191 | 347 | 9.85e-63 | 200 |
| MS.gene50575.t1 | MTR_5g030710 | 61.078 | 167 | 60 | 4 | 77 | 241 | 170 | 333 | 5.75e-62 | 198 |
| MS.gene50575.t1 | MTR_2g101500 | 62.733 | 161 | 55 | 4 | 83 | 241 | 167 | 324 | 6.17e-61 | 195 |
| MS.gene50575.t1 | MTR_8g067530 | 61.078 | 167 | 59 | 4 | 79 | 243 | 194 | 356 | 2.99e-60 | 194 |
| MS.gene50575.t1 | MTR_6g488150 | 51.471 | 204 | 85 | 4 | 35 | 237 | 58 | 248 | 2.37e-59 | 189 |
| MS.gene50575.t1 | MTR_8g103030 | 59.006 | 161 | 57 | 4 | 81 | 237 | 132 | 287 | 2.16e-56 | 182 |
| MS.gene50575.t1 | MTR_1g070830 | 42.678 | 239 | 91 | 6 | 1 | 231 | 1 | 201 | 6.91e-51 | 165 |
| MS.gene50575.t1 | MTR_1g040675 | 44.298 | 228 | 73 | 7 | 12 | 231 | 1 | 182 | 6.33e-50 | 162 |
| MS.gene50575.t1 | MTR_1g076270 | 41.304 | 230 | 69 | 7 | 9 | 231 | 8 | 178 | 5.19e-47 | 154 |
| MS.gene50575.t1 | MTR_1g093350 | 41.304 | 230 | 69 | 7 | 9 | 231 | 8 | 178 | 5.19e-47 | 154 |
| MS.gene50575.t1 | MTR_1g040675 | 41.346 | 208 | 68 | 7 | 12 | 211 | 1 | 162 | 5.27e-38 | 131 |
| MS.gene50575.t1 | MTR_4g011880 | 50.685 | 146 | 41 | 5 | 86 | 231 | 52 | 166 | 1.93e-34 | 122 |
| MS.gene50575.t1 | MTR_2g102490 | 37.500 | 224 | 91 | 9 | 2 | 223 | 4 | 180 | 2.92e-33 | 120 |
| MS.gene50575.t1 | MTR_2g100780 | 33.465 | 254 | 134 | 7 | 6 | 227 | 4 | 254 | 7.77e-30 | 113 |
| MS.gene50575.t1 | MTR_2g100780 | 33.465 | 254 | 134 | 7 | 6 | 227 | 4 | 254 | 8.72e-30 | 112 |
| MS.gene50575.t1 | MTR_8g014520 | 43.226 | 155 | 72 | 4 | 85 | 224 | 104 | 257 | 1.21e-29 | 112 |
| MS.gene50575.t1 | MTR_8g014520 | 43.226 | 155 | 72 | 4 | 85 | 224 | 104 | 257 | 1.29e-29 | 112 |
| MS.gene50575.t1 | MTR_1g069495 | 34.940 | 249 | 107 | 7 | 21 | 232 | 27 | 257 | 1.30e-26 | 104 |
| MS.gene50575.t1 | MTR_5g067350 | 60.241 | 83 | 31 | 1 | 83 | 165 | 191 | 271 | 6.70e-25 | 100 |
| MS.gene50575.t1 | MTR_6g488150 | 44.186 | 129 | 59 | 3 | 35 | 163 | 58 | 173 | 2.66e-24 | 96.7 |
| MS.gene50575.t1 | MTR_4g124300 | 36.774 | 155 | 64 | 6 | 80 | 228 | 58 | 184 | 2.30e-19 | 83.2 |
| MS.gene50575.t1 | MTR_3g106850 | 30.986 | 142 | 78 | 3 | 88 | 228 | 88 | 210 | 7.71e-19 | 82.4 |
| MS.gene50575.t1 | MTR_1g085750 | 38.835 | 103 | 50 | 1 | 122 | 224 | 81 | 170 | 8.60e-17 | 76.3 |
| MS.gene50575.t1 | MTR_4g115075 | 30.435 | 138 | 73 | 3 | 89 | 226 | 93 | 207 | 4.25e-16 | 75.1 |
| MS.gene50575.t1 | MTR_7g110790 | 37.374 | 99 | 49 | 1 | 126 | 224 | 70 | 155 | 1.62e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50575.t1 | AT4G14550 | 63.291 | 237 | 61 | 8 | 12 | 237 | 1 | 222 | 9.45e-89 | 263 |
| MS.gene50575.t1 | AT4G14550 | 64.069 | 231 | 57 | 8 | 12 | 231 | 1 | 216 | 1.18e-87 | 260 |
| MS.gene50575.t1 | AT3G23050 | 63.404 | 235 | 57 | 8 | 21 | 237 | 13 | 236 | 1.66e-87 | 260 |
| MS.gene50575.t1 | AT3G04730 | 59.184 | 245 | 61 | 8 | 14 | 237 | 4 | 230 | 6.42e-84 | 251 |
| MS.gene50575.t1 | AT1G04250 | 59.914 | 232 | 62 | 9 | 18 | 237 | 11 | 223 | 3.50e-79 | 238 |
| MS.gene50575.t1 | AT4G14550 | 62.381 | 210 | 53 | 8 | 12 | 210 | 1 | 195 | 7.61e-74 | 224 |
| MS.gene50575.t1 | AT3G23050 | 62.679 | 209 | 49 | 8 | 21 | 211 | 13 | 210 | 1.24e-72 | 221 |
| MS.gene50575.t1 | AT5G65670 | 53.023 | 215 | 85 | 6 | 35 | 237 | 120 | 330 | 2.05e-61 | 196 |
| MS.gene50575.t1 | AT5G65670 | 53.333 | 210 | 82 | 6 | 35 | 232 | 120 | 325 | 9.48e-61 | 195 |
| MS.gene50575.t1 | AT4G29080 | 57.219 | 187 | 67 | 4 | 63 | 241 | 122 | 303 | 3.04e-60 | 192 |
| MS.gene50575.t1 | AT2G22670 | 57.233 | 159 | 63 | 4 | 83 | 239 | 160 | 315 | 1.63e-55 | 181 |
| MS.gene50575.t1 | AT2G22670 | 57.233 | 159 | 63 | 4 | 83 | 239 | 160 | 315 | 1.63e-55 | 181 |
| MS.gene50575.t1 | AT2G22670 | 57.233 | 159 | 63 | 4 | 83 | 239 | 177 | 332 | 1.87e-55 | 181 |
| MS.gene50575.t1 | AT2G22670 | 58.940 | 151 | 57 | 4 | 83 | 231 | 160 | 307 | 5.87e-55 | 179 |
| MS.gene50575.t1 | AT2G22670 | 58.940 | 151 | 57 | 4 | 83 | 231 | 160 | 307 | 5.87e-55 | 179 |
| MS.gene50575.t1 | AT5G43700 | 58.389 | 149 | 36 | 5 | 84 | 231 | 58 | 181 | 3.46e-50 | 163 |
| MS.gene50575.t1 | AT1G04240 | 46.429 | 224 | 79 | 9 | 9 | 231 | 2 | 185 | 1.75e-48 | 159 |
| MS.gene50575.t1 | AT3G23030 | 42.793 | 222 | 49 | 4 | 21 | 231 | 16 | 170 | 2.15e-48 | 158 |
| MS.gene50575.t1 | AT3G23030 | 42.793 | 222 | 49 | 4 | 21 | 231 | 103 | 257 | 1.42e-47 | 159 |
| MS.gene50575.t1 | AT1G04240 | 46.429 | 224 | 79 | 9 | 9 | 231 | 102 | 285 | 2.73e-47 | 159 |
| MS.gene50575.t1 | AT4G14550 | 58.182 | 165 | 44 | 7 | 12 | 165 | 1 | 151 | 1.95e-45 | 150 |
| MS.gene50575.t1 | AT3G23050 | 57.669 | 163 | 41 | 7 | 21 | 165 | 13 | 165 | 3.18e-43 | 144 |
| MS.gene50575.t1 | AT4G14560 | 45.833 | 216 | 56 | 7 | 14 | 228 | 9 | 164 | 2.20e-40 | 137 |
| MS.gene50575.t1 | AT3G15540 | 39.912 | 228 | 92 | 7 | 8 | 231 | 2 | 188 | 2.00e-39 | 135 |
| MS.gene50575.t1 | AT2G33310 | 43.784 | 185 | 82 | 5 | 65 | 232 | 52 | 231 | 5.52e-38 | 134 |
| MS.gene50575.t1 | AT2G33310 | 43.784 | 185 | 82 | 5 | 65 | 232 | 52 | 231 | 5.52e-38 | 134 |
| MS.gene50575.t1 | AT1G15580 | 40.094 | 212 | 62 | 6 | 14 | 224 | 10 | 157 | 1.37e-37 | 130 |
| MS.gene50575.t1 | AT2G33310 | 43.548 | 186 | 82 | 6 | 65 | 232 | 52 | 232 | 1.39e-36 | 130 |
| MS.gene50575.t1 | AT1G04550 | 42.781 | 187 | 80 | 6 | 65 | 232 | 46 | 224 | 4.27e-36 | 128 |
| MS.gene50575.t1 | AT3G16500 | 34.959 | 246 | 128 | 7 | 15 | 244 | 34 | 263 | 6.63e-34 | 124 |
| MS.gene50575.t1 | AT1G52830 | 36.364 | 231 | 90 | 8 | 9 | 231 | 3 | 184 | 6.62e-33 | 119 |
| MS.gene50575.t1 | AT3G16500 | 36.245 | 229 | 120 | 6 | 15 | 227 | 34 | 252 | 8.02e-33 | 120 |
| MS.gene50575.t1 | AT4G28640 | 44.304 | 158 | 70 | 5 | 87 | 230 | 87 | 240 | 2.92e-32 | 119 |
| MS.gene50575.t1 | AT4G28640 | 44.304 | 158 | 70 | 5 | 87 | 230 | 87 | 240 | 3.76e-32 | 118 |
| MS.gene50575.t1 | AT4G28640 | 42.262 | 168 | 79 | 5 | 87 | 240 | 87 | 250 | 2.30e-31 | 117 |
| MS.gene50575.t1 | AT1G04100 | 41.420 | 169 | 68 | 7 | 90 | 231 | 95 | 259 | 3.96e-27 | 105 |
| MS.gene50575.t1 | AT1G51950 | 38.415 | 164 | 74 | 5 | 85 | 227 | 93 | 250 | 7.24e-27 | 105 |
| MS.gene50575.t1 | AT5G25890 | 37.241 | 145 | 67 | 2 | 87 | 231 | 47 | 167 | 1.77e-23 | 94.0 |
| MS.gene50575.t1 | AT3G17600 | 31.875 | 160 | 78 | 4 | 69 | 224 | 22 | 154 | 1.31e-20 | 85.9 |
| MS.gene50575.t1 | AT3G62100 | 38.532 | 109 | 51 | 2 | 118 | 224 | 74 | 168 | 4.41e-17 | 77.0 |
| MS.gene50575.t1 | AT2G46990 | 40.404 | 99 | 45 | 1 | 126 | 224 | 86 | 170 | 7.10e-17 | 76.3 |
| MS.gene50575.t1 | AT4G32280 | 32.673 | 101 | 49 | 2 | 126 | 226 | 119 | 200 | 2.47e-14 | 70.1 |
| MS.gene50575.t1 | AT4G32280 | 26.036 | 169 | 77 | 5 | 87 | 226 | 93 | 242 | 2.58e-14 | 70.9 |
| MS.gene50575.t1 | AT2G46990 | 40.698 | 86 | 37 | 1 | 126 | 211 | 86 | 157 | 3.91e-12 | 63.2 |
| MS.gene50575.t1 | AT1G04550 | 35.246 | 122 | 60 | 3 | 65 | 167 | 46 | 167 | 6.16e-12 | 62.8 |
| MS.gene50575.t1 | AT3G62100 | 37.500 | 96 | 44 | 2 | 118 | 211 | 74 | 155 | 7.70e-12 | 62.4 |
| MS.gene50575.t1 | AT1G15050 | 29.630 | 135 | 76 | 3 | 95 | 229 | 35 | 150 | 5.58e-11 | 59.7 |
Find 63 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATCCTTCACTGCTCTTT+TGG | 0.116525 | 1.2:+54165716 | None:intergenic |
| CTAACTTTCACAAAGCTTAT+TGG | 0.117785 | 1.2:+54165664 | None:intergenic |
| GGTAAAGGAGTTAAACATTT+TGG | 0.221116 | 1.2:+54165564 | None:intergenic |
| GCTCTTCTGCTCTCTGATTC+TGG | 0.233246 | 1.2:-54166678 | MS.gene50575:CDS |
| TTGTGAATCCCAAGGCATTA+AGG | 0.313394 | 1.2:-54164874 | MS.gene50575:CDS |
| ACATCTTGAGGTCTACTTTA+CGG | 0.340864 | 1.2:+54165620 | None:intergenic |
| GGAAAACAACAGAAGTAATA+AGG | 0.347716 | 1.2:-54166815 | MS.gene50575:CDS |
| GGAAGTTGCAGGGCTGAAAA+AGG | 0.353058 | 1.2:-54166892 | MS.gene50575:CDS |
| AGCAGAAGAGCCTTCTCCTT+TGG | 0.360991 | 1.2:+54166690 | None:intergenic |
| CCATCTTTGTCTTCATAAGT+TGG | 0.383939 | 1.2:+54164795 | None:intergenic |
| CATGAAATCCTTAATGCCTT+GGG | 0.384985 | 1.2:+54164866 | None:intergenic |
| GAAGCTTAATCTTTCTACTA+AGG | 0.400977 | 1.2:-54166739 | MS.gene50575:CDS |
| TCATGAAATCCTTAATGCCT+TGG | 0.406074 | 1.2:+54164865 | None:intergenic |
| CATCTTTGTCTTCATAAGTT+GGG | 0.414636 | 1.2:+54164796 | None:intergenic |
| AGGCTAGGACTTGGATTGCC+AGG | 0.417824 | 1.2:-54166837 | MS.gene50575:CDS |
| TTCTCCTTTGGCTTAAATTG+TGG | 0.418936 | 1.2:+54166702 | None:intergenic |
| AACTTGATAATGGAAGTTGC+AGG | 0.451323 | 1.2:-54166903 | None:intergenic |
| GAATGAGAGTAATAAGTTGA+TGG | 0.457906 | 1.2:-54164844 | MS.gene50575:CDS |
| GGAAAGGAAGCCATTGGACT+AGG | 0.462382 | 1.2:-54164447 | MS.gene50575:intron |
| GCTAAGGCATCAGAGAGCTC+TGG | 0.465095 | 1.2:+54165586 | None:intergenic |
| GGAGGAAAAGATGGTGTTTG+AGG | 0.477721 | 1.2:-54166871 | MS.gene50575:CDS |
| GGGCAGCAAACATGTTCTTA+CGG | 0.483487 | 1.2:+54165737 | None:intergenic |
| CTTAATCTTTCTACTAAGGA+AGG | 0.487124 | 1.2:-54166735 | MS.gene50575:CDS |
| TAATGAACAACTTACTTAGC+AGG | 0.499421 | 1.2:+54166645 | None:intergenic |
| TAAGCTGCAGCAGAAACATA+TGG | 0.513103 | 1.2:-54163744 | MS.gene50575:CDS |
| CATGTGATGCCCAGTTGACT+TGG | 0.514344 | 1.2:-54163782 | MS.gene50575:intron |
| CTAAGGCATCAGAGAGCTCT+GGG | 0.519415 | 1.2:+54165587 | None:intergenic |
| AGGTCTACTTTACGGAGGTA+AGG | 0.526416 | 1.2:+54165628 | None:intergenic |
| ATGAAAGGAAAGGAAGCCAT+TGG | 0.526527 | 1.2:-54164453 | MS.gene50575:CDS |
| ACAATTTAAGCCAAAGGAGA+AGG | 0.543283 | 1.2:-54166700 | MS.gene50575:CDS |
| ACTGAACTGAGGCTAGGACT+TGG | 0.544230 | 1.2:-54166846 | MS.gene50575:CDS |
| ATGTTTAACTCCTTTACCAC+AGG | 0.544923 | 1.2:-54165559 | MS.gene50575:intron |
| AAGCTTTGTGAAAGTTAGCA+TGG | 0.545131 | 1.2:-54165659 | MS.gene50575:CDS |
| GGTAACTCTTGTACATCTTG+AGG | 0.548937 | 1.2:+54165608 | None:intergenic |
| TTTGTGAAAGTTAGCATGGA+TGG | 0.550924 | 1.2:-54165655 | MS.gene50575:CDS |
| ACGTATAGGGCACAAGTGGT+AGG | 0.553577 | 1.2:-54165781 | MS.gene50575:intron |
| CCAACTTATGAAGACAAAGA+TGG | 0.567272 | 1.2:-54164795 | MS.gene50575:CDS |
| CGTATAGGGCACAAGTGGTA+GGG | 0.568467 | 1.2:-54165780 | MS.gene50575:intron |
| TGCTTGTCGGTGATGTACCA+TGG | 0.581796 | 1.2:-54164764 | MS.gene50575:CDS |
| GCTGCCCAAAAGAGCAGTGA+AGG | 0.587247 | 1.2:-54165721 | MS.gene50575:CDS |
| ATGAAGACAAAGATGGCGAC+TGG | 0.589440 | 1.2:-54164788 | MS.gene50575:CDS |
| TTCATAAGTTGGGACATAGT+CGG | 0.596025 | 1.2:+54164806 | None:intergenic |
| TTTACGTATCATGAAAGGAA+AGG | 0.596184 | 1.2:-54164463 | MS.gene50575:CDS |
| AGATCCACAATTTAAGCCAA+AGG | 0.598269 | 1.2:-54166706 | MS.gene50575:CDS |
| GGCTAGGACTTGGATTGCCA+GGG | 0.598855 | 1.2:-54166836 | MS.gene50575:CDS |
| AAGCGTTTACGTATCATGAA+AGG | 0.600017 | 1.2:-54164468 | MS.gene50575:CDS |
| GAATTGAAAACTTACTCCCA+TGG | 0.601391 | 1.2:+54164747 | None:intergenic |
| GATGGCGACTGGATGCTTGT+CGG | 0.601801 | 1.2:-54164777 | MS.gene50575:CDS |
| TTACGGAATGACCGCACTGG+TGG | 0.603134 | 1.2:+54165754 | None:intergenic |
| GCTTGTCGGTGATGTACCAT+GGG | 0.605812 | 1.2:-54164763 | MS.gene50575:CDS |
| GAGGAAACTGAACTGAGGCT+AGG | 0.606535 | 1.2:-54166852 | MS.gene50575:CDS |
| TTCTTACGGAATGACCGCAC+TGG | 0.606920 | 1.2:+54165751 | None:intergenic |
| CTGTACGTATAGGGCACAAG+TGG | 0.611935 | 1.2:-54165785 | MS.gene50575:intron |
| ACAGAAGTAATAAGGAAGAG+AGG | 0.613004 | 1.2:-54166807 | MS.gene50575:CDS |
| ATCATACTAACCTAGTCCAA+TGG | 0.619665 | 1.2:+54164437 | None:intergenic |
| GAAGGAAATTGTGAATCCCA+AGG | 0.620096 | 1.2:-54164882 | MS.gene50575:intron |
| TGAACAACTTACTTAGCAGG+AGG | 0.624213 | 1.2:+54166648 | None:intergenic |
| ACTTGATAATGGAAGTTGCA+GGG | 0.628469 | 1.2:-54166902 | None:intergenic |
| TGGTAGGGTGGCCACCAGTG+CGG | 0.683033 | 1.2:-54165765 | MS.gene50575:CDS |
| ATAGGGCACAAGTGGTAGGG+TGG | 0.690264 | 1.2:-54165777 | MS.gene50575:intron |
| TCTTGAGGTCTACTTTACGG+AGG | 0.703203 | 1.2:+54165623 | None:intergenic |
| TGAAAGTGAAACAAACACTG+TGG | 0.729821 | 1.2:-54166766 | MS.gene50575:CDS |
| TGTTTGAGGAAACTGAACTG+AGG | 0.788719 | 1.2:-54166857 | MS.gene50575:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAATAAATAAAATT+TGG | - | chr1.2:54165983-54166002 | MS.gene50575:intron | 0.0% |
| !! | TAAAATAAATAAATAAAAAA+GGG | + | chr1.2:54165918-54165937 | None:intergenic | 0.0% |
| !! | AAATTAAATTTATTCTTTCA+TGG | + | chr1.2:54165596-54165615 | None:intergenic | 10.0% |
| !!! | AAAGATATTTTTATAAGTAA+AGG | + | chr1.2:54166662-54166681 | None:intergenic | 10.0% |
| !!! | AAATTTAATTTCATAGAAAT+GGG | - | chr1.2:54165605-54165624 | MS.gene50575:CDS | 10.0% |
| !!! | AAGATATTTTTATAAGTAAA+GGG | + | chr1.2:54166661-54166680 | None:intergenic | 10.0% |
| !!! | GAACTATTTTAAAATTTATA+TGG | + | chr1.2:54164537-54164556 | None:intergenic | 10.0% |
| !!! | TAAATTTAATTTCATAGAAA+TGG | - | chr1.2:54165604-54165623 | MS.gene50575:CDS | 10.0% |
| !!! | TTAAAATAGTTCTATATTAA+AGG | - | chr1.2:54164545-54164564 | MS.gene50575:intron | 10.0% |
| !!! | TTTTAATTGTGAATTAAATA+TGG | - | chr1.2:54164486-54164505 | MS.gene50575:CDS | 10.0% |
| !! | AAACTATCAACTTTATAATA+AGG | - | chr1.2:54164583-54164602 | MS.gene50575:intron | 15.0% |
| !! | AATTATTAATTACAAAGGAA+TGG | + | chr1.2:54164154-54164173 | None:intergenic | 15.0% |
| !! | AATTTCATTGCTAAAATAAA+TGG | - | chr1.2:54164677-54164696 | MS.gene50575:intron | 15.0% |
| !! | ATTATTAATATGTTAGATGA+GGG | - | chr1.2:54165101-54165120 | MS.gene50575:intron | 15.0% |
| !! | GATAACAATAGTATATAATA+AGG | + | chr1.2:54164439-54164458 | None:intergenic | 15.0% |
| !! | TATACATACAATAAAATTTG+TGG | + | chr1.2:54165512-54165531 | None:intergenic | 15.0% |
| !! | TATTATTAATATGTTAGATG+AGG | - | chr1.2:54165100-54165119 | MS.gene50575:intron | 15.0% |
| !! | TTTATATTGAAATTGATTGA+AGG | - | chr1.2:54165708-54165727 | MS.gene50575:CDS | 15.0% |
| !!! | AAAATTTGCTATATTGTTAT+GGG | + | chr1.2:54164276-54164295 | None:intergenic | 15.0% |
| !!! | AGCAAAATAGTTTTATAAAA+AGG | + | chr1.2:54165251-54165270 | None:intergenic | 15.0% |
| !!! | GCAAAATAGTTTTATAAAAA+GGG | + | chr1.2:54165250-54165269 | None:intergenic | 15.0% |
| !!! | TTATGTTCCAATTAATTTTA+TGG | + | chr1.2:54164093-54164112 | None:intergenic | 15.0% |
| !! | AAATGTCTTATAAATAAGGA+TGG | - | chr1.2:54165469-54165488 | MS.gene50575:intron | 20.0% |
| !! | ACCAAATAAATGAGTTATAT+AGG | + | chr1.2:54166507-54166526 | None:intergenic | 20.0% |
| !! | ACCTATATAACTCATTTATT+TGG | - | chr1.2:54166503-54166522 | MS.gene50575:intron | 20.0% |
| !! | AGATCAATATCAAGTATTAA+TGG | - | chr1.2:54165670-54165689 | MS.gene50575:CDS | 20.0% |
| !! | ATAGTTAAAAAAATTACCTG+TGG | + | chr1.2:54165068-54165087 | None:intergenic | 20.0% |
| !! | ATCAAAAAAAAAATTACGCA+GGG | - | chr1.2:54165173-54165192 | MS.gene50575:intron | 20.0% |
| !! | ATTCAAATGTTTAAAAGTTG+TGG | + | chr1.2:54166611-54166630 | None:intergenic | 20.0% |
| !! | CCAAAAATGTCTTATAAATA+AGG | - | chr1.2:54165465-54165484 | MS.gene50575:intron | 20.0% |
| !! | CTTAAAGTAAAAGAAAGTTA+GGG | + | chr1.2:54166412-54166431 | None:intergenic | 20.0% |
| !! | GCAATATTAAGACAAAATTA+AGG | + | chr1.2:54165553-54165572 | None:intergenic | 20.0% |
| !! | GTACAATAAAAACATATAGT+AGG | + | chr1.2:54164617-54164636 | None:intergenic | 20.0% |
| !! | TACTTATAGAAAAAAGTAAG+AGG | + | chr1.2:54164343-54164362 | None:intergenic | 20.0% |
| !! | TATCAAAAAAAAAATTACGC+AGG | - | chr1.2:54165172-54165191 | MS.gene50575:intron | 20.0% |
| !! | TCTTAAAGTAAAAGAAAGTT+AGG | + | chr1.2:54166413-54166432 | None:intergenic | 20.0% |
| !! | TTAATAGTATGCTCATAAAT+TGG | - | chr1.2:54166254-54166273 | MS.gene50575:intron | 20.0% |
| !!! | AAACAAACTATCTCTTTTAA+AGG | - | chr1.2:54165365-54165384 | MS.gene50575:intron | 20.0% |
| !!! | AAATTTGCTATATTGTTATG+GGG | + | chr1.2:54164275-54164294 | None:intergenic | 20.0% |
| !!! | AATTTTGTCTTAATATTGCA+TGG | - | chr1.2:54165554-54165573 | MS.gene50575:intron | 20.0% |
| !!! | CAAAATTTGCTATATTGTTA+TGG | + | chr1.2:54164277-54164296 | None:intergenic | 20.0% |
| !!! | CCTTATTTATAAGACATTTT+TGG | + | chr1.2:54165468-54165487 | None:intergenic | 20.0% |
| !!! | TATAATAAATAAGGGTATGT+AGG | + | chr1.2:54165302-54165321 | None:intergenic | 20.0% |
| !!! | TTACTTTAAGATACAATAGA+TGG | - | chr1.2:54166422-54166441 | MS.gene50575:intron | 20.0% |
| !!! | TTCCAATTAATTTTATGGAT+CGG | + | chr1.2:54164088-54164107 | None:intergenic | 20.0% |
| !!! | TTTGGTTCAAACAATTTAAT+TGG | - | chr1.2:54166521-54166540 | MS.gene50575:intron | 20.0% |
| !!! | TTTTTGTTAGCTATATATTG+TGG | + | chr1.2:54166075-54166094 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGAAGGATGTTTA+GGG | + | chr1.2:54166344-54166363 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGAAGGATGTTT+AGG | + | chr1.2:54166345-54166364 | None:intergenic | 20.0% |
| ! | AAAAAAATTACCTGTGGTAA+AGG | + | chr1.2:54165062-54165081 | None:intergenic | 25.0% |
| ! | AAATTGGTATTAAGTACAAG+AGG | - | chr1.2:54166270-54166289 | MS.gene50575:intron | 25.0% |
| ! | TATGATTGAAATTAGTACGT+AGG | + | chr1.2:54165963-54165982 | None:intergenic | 25.0% |
| ! | TCAAAAAAAAAATTACGCAG+GGG | - | chr1.2:54165174-54165193 | MS.gene50575:intron | 25.0% |
| ! | TGACATTCTAAGCAAAATAA+CGG | - | chr1.2:54166709-54166728 | MS.gene50575:CDS | 25.0% |
| ! | TTACGCATGCTTAAATATTT+AGG | + | chr1.2:54163990-54164009 | None:intergenic | 25.0% |
| ! | TTCCGATCCATAAAATTAAT+TGG | - | chr1.2:54164083-54164102 | MS.gene50575:intron | 25.0% |
| !! | TAGTTCTATATTAAAGGACA+AGG | - | chr1.2:54164551-54164570 | MS.gene50575:intron | 25.0% |
| !!! | AGACATTTTTGGTAAAATCA+CGG | + | chr1.2:54165457-54165476 | None:intergenic | 25.0% |
| AAAGCAATACAATCATGAAC+TGG | - | chr1.2:54164716-54164735 | MS.gene50575:intron | 30.0% | |
| ACTAATTGAACTGTACGTAT+AGG | - | chr1.2:54164813-54164832 | MS.gene50575:CDS | 30.0% | |
| ACTACCAATTAGTAATTCAG+TGG | + | chr1.2:54165893-54165912 | None:intergenic | 30.0% | |
| AGTTCATGATTGTATTGCTT+TGG | + | chr1.2:54164717-54164736 | None:intergenic | 30.0% | |
| ATAGAAAAAAGTAAGAGGCA+AGG | + | chr1.2:54164338-54164357 | None:intergenic | 30.0% | |
| CATCTTTGTCTTCATAAGTT+GGG | + | chr1.2:54165815-54165834 | None:intergenic | 30.0% | |
| CTAACTTTCACAAAGCTTAT+TGG | + | chr1.2:54164947-54164966 | None:intergenic | 30.0% | |
| CTAATTGAACTGTACGTATA+GGG | - | chr1.2:54164814-54164833 | MS.gene50575:CDS | 30.0% | |
| CTTAATCTTTCTACTAAGGA+AGG | - | chr1.2:54163873-54163892 | MS.gene50575:intron | 30.0% | |
| GAAGCTTAATCTTTCTACTA+AGG | - | chr1.2:54163869-54163888 | MS.gene50575:intron | 30.0% | |
| GGAAAACAACAGAAGTAATA+AGG | - | chr1.2:54163793-54163812 | MS.gene50575:intron | 30.0% | |
| GGTTCAAACAATTTAATTGG+CGG | - | chr1.2:54166524-54166543 | MS.gene50575:intron | 30.0% | |
| TAATGAACAACTTACTTAGC+AGG | + | chr1.2:54163966-54163985 | None:intergenic | 30.0% | |
| TCTTCCACTGAATTACTAAT+TGG | - | chr1.2:54165886-54165905 | MS.gene50575:intron | 30.0% | |
| TTGCTAAGAACAGAGAATAA+GGG | - | chr1.2:54166557-54166576 | MS.gene50575:intron | 30.0% | |
| TTTACGTATCATGAAAGGAA+AGG | - | chr1.2:54166145-54166164 | MS.gene50575:intron | 30.0% | |
| ! | AGTCTTATAATTAGAGACAG+AGG | + | chr1.2:54165210-54165229 | None:intergenic | 30.0% |
| ! | GAAAATCCTCAAGTTTTTGA+AGG | + | chr1.2:54164743-54164762 | None:intergenic | 30.0% |
| ! | GAATGAGAGTAATAAGTTGA+TGG | - | chr1.2:54165764-54165783 | MS.gene50575:CDS | 30.0% |
| ! | GGTAAAGGAGTTAAACATTT+TGG | + | chr1.2:54165047-54165066 | None:intergenic | 30.0% |
| !! | TTTATTTTCTTTGTGTCGAC+AGG | - | chr1.2:54166099-54166118 | MS.gene50575:intron | 30.0% |
| !!! | GACATTTTTGGTAAAATCAC+GGG | + | chr1.2:54165456-54165475 | None:intergenic | 30.0% |
| !!! | TCTTTGTTTTGGTGATTAAG+TGG | + | chr1.2:54166318-54166337 | None:intergenic | 30.0% |
| AAGCGTTTACGTATCATGAA+AGG | - | chr1.2:54166140-54166159 | MS.gene50575:intron | 35.0% | |
| ACAATTTAAGCCAAAGGAGA+AGG | - | chr1.2:54163908-54163927 | MS.gene50575:intron | 35.0% | |
| ACAGAAGTAATAAGGAAGAG+AGG | - | chr1.2:54163801-54163820 | MS.gene50575:intron | 35.0% | |
| ACATCTTGAGGTCTACTTTA+CGG | + | chr1.2:54164991-54165010 | None:intergenic | 35.0% | |
| AGATCCACAATTTAAGCCAA+AGG | - | chr1.2:54163902-54163921 | MS.gene50575:intron | 35.0% | |
| AGTGAAAGAGCGAAATGATA+AGG | + | chr1.2:54165143-54165162 | None:intergenic | 35.0% | |
| ATCATACTAACCTAGTCCAA+TGG | + | chr1.2:54166174-54166193 | None:intergenic | 35.0% | |
| ATGTTTAACTCCTTTACCAC+AGG | - | chr1.2:54165049-54165068 | MS.gene50575:intron | 35.0% | |
| ATTACAAAGGAATGGAACAC+AGG | + | chr1.2:54164146-54164165 | None:intergenic | 35.0% | |
| CATGAAATCCTTAATGCCTT+GGG | + | chr1.2:54165745-54165764 | None:intergenic | 35.0% | |
| CCAACTTATGAAGACAAAGA+TGG | - | chr1.2:54165813-54165832 | MS.gene50575:intron | 35.0% | |
| CCATCTTTGTCTTCATAAGT+TGG | + | chr1.2:54165816-54165835 | None:intergenic | 35.0% | |
| CTTGCTAAGAACAGAGAATA+AGG | - | chr1.2:54166556-54166575 | MS.gene50575:intron | 35.0% | |
| GAATTGAAAACTTACTCCCA+TGG | + | chr1.2:54165864-54165883 | None:intergenic | 35.0% | |
| GAGTACACATCAAGACTAAT+TGG | + | chr1.2:54164251-54164270 | None:intergenic | 35.0% | |
| TCATGAAATCCTTAATGCCT+TGG | + | chr1.2:54165746-54165765 | None:intergenic | 35.0% | |
| TGAAAGTGAAACAAACACTG+TGG | - | chr1.2:54163842-54163861 | MS.gene50575:intron | 35.0% | |
| TGCTAAGAACAGAGAATAAG+GGG | - | chr1.2:54166558-54166577 | MS.gene50575:intron | 35.0% | |
| TTAGCTATATATTGTGGTCG+TGG | + | chr1.2:54166069-54166088 | None:intergenic | 35.0% | |
| TTTGTGAAAGTTAGCATGGA+TGG | - | chr1.2:54164953-54164972 | MS.gene50575:intron | 35.0% | |
| ! | AAGCTTTGTGAAAGTTAGCA+TGG | - | chr1.2:54164949-54164968 | MS.gene50575:intron | 35.0% |
| ! | GAAGTGCTTGAGTATATACA+TGG | + | chr1.2:54164793-54164812 | None:intergenic | 35.0% |
| ! | TTCATAAGTTGGGACATAGT+CGG | + | chr1.2:54165805-54165824 | None:intergenic | 35.0% |
| ! | TTCTCCTTTGGCTTAAATTG+TGG | + | chr1.2:54163909-54163928 | None:intergenic | 35.0% |
| !! | GTTTAGGGATCTCTTTGTTT+TGG | + | chr1.2:54166329-54166348 | None:intergenic | 35.0% |
| !!! | ATTACTTCTGTTGTTTTCCC+TGG | + | chr1.2:54163792-54163811 | None:intergenic | 35.0% |
| !!! | GGAGTTAAACATTTTGGCTA+AGG | + | chr1.2:54165041-54165060 | None:intergenic | 35.0% |
| ACTGGTCCTTCAAAAACTTG+AGG | - | chr1.2:54164734-54164753 | MS.gene50575:intron | 40.0% | |
| ATGAAAGGAAAGGAAGCCAT+TGG | - | chr1.2:54166155-54166174 | MS.gene50575:intron | 40.0% | |
| CCATGGAAAAATGCAAGAAC+AGG | - | chr1.2:54166765-54166784 | MS.gene50575:CDS | 40.0% | |
| CGTGCATGTGAATATACACA+TGG | - | chr1.2:54165646-54165665 | MS.gene50575:CDS | 40.0% | |
| GAAGGAAATTGTGAATCCCA+AGG | - | chr1.2:54165726-54165745 | MS.gene50575:CDS | 40.0% | |
| GCTGAAAAAGGAGGAAAAGA+TGG | - | chr1.2:54163728-54163747 | MS.gene50575:CDS | 40.0% | |
| GGTAACTCTTGTACATCTTG+AGG | + | chr1.2:54165003-54165022 | None:intergenic | 40.0% | |
| GTGGTTTCTCTGTCTCATTA+TGG | + | chr1.2:54166050-54166069 | None:intergenic | 40.0% | |
| TAAGCTGCAGCAGAAACATA+TGG | - | chr1.2:54166864-54166883 | MS.gene50575:CDS | 40.0% | |
| TGAACAACTTACTTAGCAGG+AGG | + | chr1.2:54163963-54163982 | None:intergenic | 40.0% | |
| TGTTTGAGGAAACTGAACTG+AGG | - | chr1.2:54163751-54163770 | MS.gene50575:CDS | 40.0% | |
| TTAGAGACAGAGGTAGTAGT+TGG | + | chr1.2:54165200-54165219 | None:intergenic | 40.0% | |
| ! | CCTGTTCTTGCATTTTTCCA+TGG | + | chr1.2:54166768-54166787 | None:intergenic | 40.0% |
| ! | TGATCCTTCACTGCTCTTTT+GGG | + | chr1.2:54164894-54164913 | None:intergenic | 40.0% |
| ! | TTGCATTTTTCCATGGCTCT+AGG | + | chr1.2:54166761-54166780 | None:intergenic | 40.0% |
| ! | TTGTGAATCCCAAGGCATTA+AGG | - | chr1.2:54165734-54165753 | MS.gene50575:CDS | 40.0% |
| AGGTCTACTTTACGGAGGTA+AGG | + | chr1.2:54164983-54165002 | None:intergenic | 45.0% | |
| ATGAAGACAAAGATGGCGAC+TGG | - | chr1.2:54165820-54165839 | MS.gene50575:intron | 45.0% | |
| CTTCAGTTGCCAAGTCAACT+GGG | + | chr1.2:54166838-54166857 | None:intergenic | 45.0% | |
| GGAGGAAAAGATGGTGTTTG+AGG | - | chr1.2:54163737-54163756 | MS.gene50575:CDS | 45.0% | |
| GGGCAGCAAACATGTTCTTA+CGG | + | chr1.2:54164874-54164893 | None:intergenic | 45.0% | |
| TCTTGAGGTCTACTTTACGG+AGG | + | chr1.2:54164988-54165007 | None:intergenic | 45.0% | |
| ! | CTGATCCTTCACTGCTCTTT+TGG | + | chr1.2:54164895-54164914 | None:intergenic | 45.0% |
| !! | AAAAAAAATAGTATATAATA+AGG | + | chr1.2:54164399-54164418 | None:intergenic | 5.0% |
| !! | AAAAAAATGTATAATAAATA+AGG | + | chr1.2:54165311-54165330 | None:intergenic | 5.0% |
| !! | AAAAAATAAAAAAAATAGTA+AGG | + | chr1.2:54164367-54164386 | None:intergenic | 5.0% |
| !! | AAAAAATGTATAATAAATAA+GGG | + | chr1.2:54165310-54165329 | None:intergenic | 5.0% |
| !! | ATATAAATTATTAATTACAA+AGG | + | chr1.2:54164159-54164178 | None:intergenic | 5.0% |
| !! | CTAAAATAAATAAATAAAAA+AGG | + | chr1.2:54165919-54165938 | None:intergenic | 5.0% |
| !!! | TACTATTTTTTTTATTTTTT+TGG | - | chr1.2:54164367-54164386 | MS.gene50575:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTGA+AGG | + | chr1.2:54166354-54166373 | None:intergenic | 5.0% |
| ACGTATAGGGCACAAGTGGT+AGG | - | chr1.2:54164827-54164846 | MS.gene50575:CDS | 50.0% | |
| ACTGAACTGAGGCTAGGACT+TGG | - | chr1.2:54163762-54163781 | MS.gene50575:CDS | 50.0% | |
| AGCAGAAGAGCCTTCTCCTT+TGG | + | chr1.2:54163921-54163940 | None:intergenic | 50.0% | |
| AGTTGCAGGGCTGAAAAAGG+AGG | - | chr1.2:54163719-54163738 | MS.gene50575:CDS | 50.0% | |
| CAAGTCAACTGGGCATCACA+TGG | + | chr1.2:54166828-54166847 | None:intergenic | 50.0% | |
| CATGTGATGCCCAGTTGACT+TGG | - | chr1.2:54166826-54166845 | MS.gene50575:CDS | 50.0% | |
| CGTATAGGGCACAAGTGGTA+GGG | - | chr1.2:54164828-54164847 | MS.gene50575:CDS | 50.0% | |
| CTGTACGTATAGGGCACAAG+TGG | - | chr1.2:54164823-54164842 | MS.gene50575:CDS | 50.0% | |
| GAGGAAACTGAACTGAGGCT+AGG | - | chr1.2:54163756-54163775 | MS.gene50575:CDS | 50.0% | |
| GCATCACATGGAGCAGGTTA+TGG | + | chr1.2:54166816-54166835 | None:intergenic | 50.0% | |
| GCTCTTCTGCTCTCTGATTC+TGG | - | chr1.2:54163930-54163949 | MS.gene50575:intron | 50.0% | |
| GCTTCAGTTGCCAAGTCAAC+TGG | + | chr1.2:54166839-54166858 | None:intergenic | 50.0% | |
| GCTTGTCGGTGATGTACCAT+GGG | - | chr1.2:54165845-54165864 | MS.gene50575:intron | 50.0% | |
| GGAAAGGAAGCCATTGGACT+AGG | - | chr1.2:54166161-54166180 | MS.gene50575:intron | 50.0% | |
| GGAAGTTGCAGGGCTGAAAA+AGG | - | chr1.2:54163716-54163735 | MS.gene50575:CDS | 50.0% | |
| TATGTCAGCACCTAGAGCCA+TGG | - | chr1.2:54166748-54166767 | MS.gene50575:CDS | 50.0% | |
| TGCTTGTCGGTGATGTACCA+TGG | - | chr1.2:54165844-54165863 | MS.gene50575:intron | 50.0% | |
| TTCTTACGGAATGACCGCAC+TGG | + | chr1.2:54164860-54164879 | None:intergenic | 50.0% | |
| ! | CTAAGGCATCAGAGAGCTCT+GGG | + | chr1.2:54165024-54165043 | None:intergenic | 50.0% |
| AACTGGGCATCACATGGAGC+AGG | + | chr1.2:54166822-54166841 | None:intergenic | 55.0% | |
| AGGCTAGGACTTGGATTGCC+AGG | - | chr1.2:54163771-54163790 | MS.gene50575:CDS | 55.0% | |
| ATAGGGCACAAGTGGTAGGG+TGG | - | chr1.2:54164831-54164850 | MS.gene50575:CDS | 55.0% | |
| GATGGCGACTGGATGCTTGT+CGG | - | chr1.2:54165831-54165850 | MS.gene50575:intron | 55.0% | |
| GCTGCCCAAAAGAGCAGTGA+AGG | - | chr1.2:54164887-54164906 | MS.gene50575:intron | 55.0% | |
| GGCTAGGACTTGGATTGCCA+GGG | - | chr1.2:54163772-54163791 | MS.gene50575:intron | 55.0% | |
| TTACGGAATGACCGCACTGG+TGG | + | chr1.2:54164857-54164876 | None:intergenic | 55.0% | |
| ! | GCTAAGGCATCAGAGAGCTC+TGG | + | chr1.2:54165025-54165044 | None:intergenic | 55.0% |
| TGGTAGGGTGGCCACCAGTG+CGG | - | chr1.2:54164843-54164862 | MS.gene50575:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 54163714 | 54166916 | 54163714 | ID=MS.gene50575 |
| chr1.2 | mRNA | 54163714 | 54166916 | 54163714 | ID=MS.gene50575.t1;Parent=MS.gene50575 |
| chr1.2 | exon | 54166660 | 54166916 | 54166660 | ID=MS.gene50575.t1.exon1;Parent=MS.gene50575.t1 |
| chr1.2 | CDS | 54166660 | 54166916 | 54166660 | ID=cds.MS.gene50575.t1;Parent=MS.gene50575.t1 |
| chr1.2 | exon | 54165560 | 54165795 | 54165560 | ID=MS.gene50575.t1.exon2;Parent=MS.gene50575.t1 |
| chr1.2 | CDS | 54165560 | 54165795 | 54165560 | ID=cds.MS.gene50575.t1;Parent=MS.gene50575.t1 |
| chr1.2 | exon | 54164762 | 54164900 | 54164762 | ID=MS.gene50575.t1.exon3;Parent=MS.gene50575.t1 |
| chr1.2 | CDS | 54164762 | 54164900 | 54164762 | ID=cds.MS.gene50575.t1;Parent=MS.gene50575.t1 |
| chr1.2 | exon | 54164448 | 54164509 | 54164448 | ID=MS.gene50575.t1.exon4;Parent=MS.gene50575.t1 |
| chr1.2 | CDS | 54164448 | 54164509 | 54164448 | ID=cds.MS.gene50575.t1;Parent=MS.gene50575.t1 |
| chr1.2 | exon | 54163714 | 54163790 | 54163714 | ID=MS.gene50575.t1.exon5;Parent=MS.gene50575.t1 |
| chr1.2 | CDS | 54163714 | 54163790 | 54163714 | ID=cds.MS.gene50575.t1;Parent=MS.gene50575.t1 |
| Gene Sequence |
| Protein sequence |
