Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39638.t1 | XP_003607987.2 | 99 | 196 | 2 | 0 | 1 | 196 | 1 | 196 | 7.50E-81 | 310.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39638.t1 | Q9ZQE6 | 45.3 | 192 | 98 | 1 | 1 | 192 | 1 | 185 | 1.2e-39 | 164.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39638.t1 | B7FMR4 | 99.0 | 196 | 2 | 0 | 1 | 196 | 1 | 196 | 5.4e-81 | 310.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene39638 | 0.856269 | 3.61E-62 | -1.69E-46 |
| MS.gene049151 | MS.gene39638 | 0.838857 | 2.24E-57 | -1.69E-46 |
| MS.gene049153 | MS.gene39638 | 0.868499 | 6.24E-66 | -1.69E-46 |
| MS.gene049378 | MS.gene39638 | 0.841788 | 3.84E-58 | -1.69E-46 |
| MS.gene049443 | MS.gene39638 | 0.828913 | 6.90E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene39638 | 0.817096 | 3.94E-52 | -1.69E-46 |
| MS.gene049915 | MS.gene39638 | 0.810073 | 1.38E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene39638 | 0.814433 | 1.54E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene39638 | 0.802011 | 6.87E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene39638 | 0.808899 | 2.47E-50 | -1.69E-46 |
| MS.gene050398 | MS.gene39638 | 0.800878 | 1.17E-48 | -1.69E-46 |
| MS.gene050426 | MS.gene39638 | -0.803544 | 3.31E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene39638 | -0.826685 | 2.37E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene39638 | 0.831577 | 1.54E-55 | -1.69E-46 |
| MS.gene050680 | MS.gene39638 | 0.816829 | 4.52E-52 | -1.69E-46 |
| MS.gene050750 | MS.gene39638 | 0.810726 | 9.99E-51 | -1.69E-46 |
| MS.gene050820 | MS.gene39638 | 0.814965 | 1.18E-51 | -1.69E-46 |
| MS.gene050900 | MS.gene39638 | 0.813934 | 1.99E-51 | -1.69E-46 |
| MS.gene050953 | MS.gene39638 | 0.82689 | 2.12E-54 | -1.69E-46 |
| MS.gene051373 | MS.gene39638 | 0.808025 | 3.79E-50 | -1.69E-46 |
| MS.gene051535 | MS.gene39638 | 0.815784 | 7.74E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene39638 | 0.810473 | 1.13E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene39638 | 0.860127 | 2.56E-63 | -1.69E-46 |
| MS.gene052077 | MS.gene39638 | 0.858678 | 6.99E-63 | -1.69E-46 |
| MS.gene052188 | MS.gene39638 | 0.812681 | 3.75E-51 | -1.69E-46 |
| MS.gene052255 | MS.gene39638 | 0.814518 | 1.48E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene39638 | 0.811121 | 8.20E-51 | -1.69E-46 |
| MS.gene052426 | MS.gene39638 | 0.84363 | 1.25E-58 | -1.69E-46 |
| MS.gene05316 | MS.gene39638 | 0.829322 | 5.49E-55 | -1.69E-46 |
| MS.gene053494 | MS.gene39638 | 0.97032 | 1.94E-131 | -1.69E-46 |
| MS.gene053836 | MS.gene39638 | 0.813367 | 2.65E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene39638 | 0.814521 | 1.48E-51 | -1.69E-46 |
| MS.gene054349 | MS.gene39638 | 0.835039 | 2.12E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene39638 | 0.809426 | 1.90E-50 | -1.69E-46 |
| MS.gene054405 | MS.gene39638 | 0.824927 | 6.19E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene39638 | 0.854396 | 1.27E-61 | -1.69E-46 |
| MS.gene05510 | MS.gene39638 | 0.875822 | 2.28E-68 | -1.69E-46 |
| MS.gene05553 | MS.gene39638 | 0.81626 | 6.06E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene39638 | 0.878206 | 3.39E-69 | -1.69E-46 |
| MS.gene056447 | MS.gene39638 | 0.808831 | 2.55E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene39638 | 0.839859 | 1.23E-57 | -1.69E-46 |
| MS.gene056979 | MS.gene39638 | 0.849227 | 3.70E-60 | -1.69E-46 |
| MS.gene057394 | MS.gene39638 | 0.837075 | 6.44E-57 | -1.69E-46 |
| MS.gene057395 | MS.gene39638 | 0.810124 | 1.35E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene39638 | 0.840451 | 8.63E-58 | -1.69E-46 |
| MS.gene05761 | MS.gene39638 | 0.819691 | 1.02E-52 | -1.69E-46 |
| MS.gene057750 | MS.gene39638 | 0.808684 | 2.74E-50 | -1.69E-46 |
| MS.gene057754 | MS.gene39638 | 0.812426 | 4.27E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene39638 | 0.817247 | 3.64E-52 | -1.69E-46 |
| MS.gene058146 | MS.gene39638 | 0.827851 | 1.24E-54 | -1.69E-46 |
| MS.gene058435 | MS.gene39638 | 0.82914 | 6.08E-55 | -1.69E-46 |
| MS.gene058595 | MS.gene39638 | 0.81077 | 9.77E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene39638 | 0.823454 | 1.37E-53 | -1.69E-46 |
| MS.gene058949 | MS.gene39638 | 0.828201 | 1.03E-54 | -1.69E-46 |
| MS.gene059128 | MS.gene39638 | 0.803519 | 3.35E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene39638 | 0.833034 | 6.72E-56 | -1.69E-46 |
| MS.gene059247 | MS.gene39638 | 0.804359 | 2.24E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene39638 | 0.840216 | 9.94E-58 | -1.69E-46 |
| MS.gene059420 | MS.gene39638 | 0.803417 | 3.52E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene39638 | 0.841016 | 6.13E-58 | -1.69E-46 |
| MS.gene05984 | MS.gene39638 | 0.806963 | 6.37E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene39638 | 0.801797 | 7.60E-49 | -1.69E-46 |
| MS.gene060495 | MS.gene39638 | 0.821048 | 4.97E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene39638 | 0.816483 | 5.40E-52 | -1.69E-46 |
| MS.gene060685 | MS.gene39638 | 0.804153 | 2.48E-49 | -1.69E-46 |
| MS.gene060802 | MS.gene39638 | 0.825787 | 3.87E-54 | -1.69E-46 |
| MS.gene060940 | MS.gene39638 | 0.827459 | 1.55E-54 | -1.69E-46 |
| MS.gene060942 | MS.gene39638 | 0.83796 | 3.82E-57 | -1.69E-46 |
| MS.gene060943 | MS.gene39638 | 0.851781 | 7.10E-61 | -1.69E-46 |
| MS.gene060998 | MS.gene39638 | 0.817543 | 3.12E-52 | -1.69E-46 |
| MS.gene061002 | MS.gene39638 | 0.85744 | 1.63E-62 | -1.69E-46 |
| MS.gene061049 | MS.gene39638 | 0.810212 | 1.29E-50 | -1.69E-46 |
| MS.gene061114 | MS.gene39638 | -0.807178 | 5.74E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene39638 | 0.816896 | 4.37E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39638.t1 | MTR_4g086260 | 99.490 | 196 | 1 | 0 | 1 | 196 | 1 | 196 | 9.04e-145 | 400 |
| MS.gene39638.t1 | MTR_5g017510 | 46.632 | 193 | 88 | 6 | 1 | 189 | 1 | 182 | 8.11e-48 | 155 |
| MS.gene39638.t1 | MTR_5g017560 | 46.632 | 193 | 88 | 6 | 1 | 189 | 1 | 182 | 8.11e-48 | 155 |
| MS.gene39638.t1 | MTR_5g017550 | 45.789 | 190 | 93 | 3 | 1 | 189 | 1 | 181 | 4.38e-47 | 153 |
| MS.gene39638.t1 | MTR_8g105230 | 43.972 | 141 | 77 | 1 | 57 | 195 | 36 | 176 | 2.00e-32 | 115 |
| MS.gene39638.t1 | MTR_1g032070 | 42.446 | 139 | 78 | 1 | 56 | 192 | 45 | 183 | 1.57e-31 | 113 |
| MS.gene39638.t1 | MTR_1g032070 | 39.394 | 66 | 40 | 0 | 128 | 193 | 46 | 111 | 2.28e-11 | 60.5 |
| MS.gene39638.t1 | MTR_3g067610 | 40.876 | 137 | 79 | 1 | 56 | 192 | 4 | 138 | 7.19e-31 | 110 |
| MS.gene39638.t1 | MTR_5g079340 | 43.066 | 137 | 77 | 1 | 56 | 191 | 3 | 139 | 1.58e-30 | 109 |
| MS.gene39638.t1 | MTR_8g107110 | 38.889 | 144 | 87 | 1 | 50 | 192 | 17 | 160 | 6.61e-29 | 105 |
| MS.gene39638.t1 | MTR_1g046950 | 39.286 | 140 | 81 | 1 | 56 | 191 | 3 | 142 | 4.04e-27 | 100 |
| MS.gene39638.t1 | MTR_1g047100 | 38.406 | 138 | 82 | 1 | 56 | 190 | 3 | 140 | 8.26e-26 | 97.4 |
| MS.gene39638.t1 | MTR_6g079570 | 38.889 | 144 | 82 | 3 | 55 | 194 | 24 | 165 | 2.64e-25 | 97.1 |
| MS.gene39638.t1 | MTR_8g036075 | 37.838 | 148 | 82 | 4 | 57 | 194 | 49 | 196 | 6.17e-25 | 96.7 |
| MS.gene39638.t1 | MTR_7g089760 | 37.956 | 137 | 81 | 2 | 57 | 189 | 5 | 141 | 4.20e-24 | 93.2 |
| MS.gene39638.t1 | MTR_4g067270 | 37.681 | 138 | 82 | 2 | 56 | 189 | 4 | 141 | 2.63e-23 | 90.9 |
| MS.gene39638.t1 | MTR_7g075040 | 38.621 | 145 | 78 | 4 | 56 | 189 | 46 | 190 | 4.01e-23 | 91.7 |
| MS.gene39638.t1 | MTR_4g103655 | 35.821 | 134 | 85 | 1 | 57 | 189 | 6 | 139 | 4.51e-22 | 87.4 |
| MS.gene39638.t1 | MTR_7g087610 | 35.766 | 137 | 86 | 1 | 55 | 189 | 10 | 146 | 6.52e-22 | 87.4 |
| MS.gene39638.t1 | MTR_2g098890 | 36.429 | 140 | 83 | 2 | 56 | 189 | 63 | 202 | 8.45e-22 | 88.6 |
| MS.gene39638.t1 | MTR_3g089070 | 34.615 | 130 | 84 | 1 | 61 | 189 | 10 | 139 | 9.63e-22 | 86.7 |
| MS.gene39638.t1 | MTR_3g089090 | 34.615 | 130 | 84 | 1 | 61 | 189 | 9 | 138 | 1.13e-21 | 86.7 |
| MS.gene39638.t1 | MTR_1g076650 | 36.842 | 133 | 82 | 1 | 59 | 189 | 14 | 146 | 3.57e-21 | 85.5 |
| MS.gene39638.t1 | MTR_5g088320 | 35.766 | 137 | 86 | 1 | 55 | 189 | 10 | 146 | 3.79e-21 | 85.5 |
| MS.gene39638.t1 | MTR_6g025320 | 35.766 | 137 | 86 | 1 | 55 | 189 | 10 | 146 | 4.09e-21 | 85.5 |
| MS.gene39638.t1 | MTR_4g103630 | 35.075 | 134 | 86 | 1 | 57 | 189 | 6 | 139 | 1.61e-20 | 83.6 |
| MS.gene39638.t1 | MTR_4g103650 | 35.075 | 134 | 86 | 1 | 57 | 189 | 2 | 135 | 2.71e-20 | 82.8 |
| MS.gene39638.t1 | MTR_6g023460 | 34.615 | 130 | 84 | 1 | 61 | 189 | 12 | 141 | 2.74e-20 | 82.8 |
| MS.gene39638.t1 | MTR_1g041285 | 36.296 | 135 | 84 | 1 | 57 | 189 | 12 | 146 | 3.92e-20 | 82.8 |
| MS.gene39638.t1 | MTR_8g066630 | 30.070 | 143 | 95 | 1 | 55 | 192 | 15 | 157 | 4.48e-20 | 83.2 |
| MS.gene39638.t1 | MTR_4g112460 | 30.282 | 142 | 95 | 1 | 55 | 192 | 9 | 150 | 1.08e-19 | 82.0 |
| MS.gene39638.t1 | MTR_7g090450 | 35.000 | 140 | 84 | 3 | 57 | 189 | 73 | 212 | 1.10e-18 | 80.5 |
| MS.gene39638.t1 | MTR_1g071150 | 34.921 | 126 | 81 | 1 | 65 | 189 | 20 | 145 | 1.37e-18 | 78.6 |
| MS.gene39638.t1 | MTR_4g115170 | 35.714 | 154 | 79 | 3 | 56 | 189 | 63 | 216 | 2.35e-18 | 80.1 |
| MS.gene39638.t1 | MTR_7g074020 | 31.646 | 158 | 105 | 2 | 41 | 195 | 14 | 171 | 1.83e-17 | 76.3 |
| MS.gene39638.t1 | MTR_8g069915 | 27.941 | 136 | 94 | 1 | 61 | 192 | 16 | 151 | 4.81e-17 | 75.1 |
| MS.gene39638.t1 | MTR_5g008695 | 35.965 | 114 | 69 | 1 | 82 | 191 | 2 | 115 | 1.29e-16 | 72.8 |
| MS.gene39638.t1 | MTR_8g078270 | 34.074 | 135 | 87 | 2 | 58 | 190 | 54 | 188 | 1.30e-16 | 74.3 |
| MS.gene39638.t1 | MTR_0168s0120 | 36.364 | 110 | 68 | 1 | 82 | 189 | 1 | 110 | 2.55e-16 | 71.6 |
| MS.gene39638.t1 | MTR_6g025320 | 36.364 | 110 | 68 | 1 | 82 | 189 | 1 | 110 | 2.55e-16 | 71.6 |
| MS.gene39638.t1 | MTR_5g027000 | 32.031 | 128 | 83 | 2 | 61 | 185 | 26 | 152 | 3.01e-16 | 72.8 |
| MS.gene39638.t1 | MTR_7g074240 | 32.192 | 146 | 85 | 2 | 58 | 189 | 25 | 170 | 3.30e-16 | 73.2 |
| MS.gene39638.t1 | MTR_7g115040 | 34.615 | 130 | 83 | 1 | 62 | 189 | 17 | 146 | 4.82e-16 | 72.0 |
| MS.gene39638.t1 | MTR_4g132040 | 31.073 | 177 | 109 | 5 | 25 | 195 | 369 | 538 | 6.02e-16 | 75.5 |
| MS.gene39638.t1 | MTR_5g089320 | 33.083 | 133 | 87 | 2 | 58 | 189 | 374 | 505 | 1.91e-15 | 74.3 |
| MS.gene39638.t1 | MTR_6g007613 | 30.556 | 180 | 108 | 4 | 19 | 195 | 5 | 170 | 2.11e-15 | 70.9 |
| MS.gene39638.t1 | MTR_5g017540 | 47.561 | 82 | 42 | 1 | 51 | 131 | 17 | 98 | 2.14e-15 | 69.3 |
| MS.gene39638.t1 | MTR_1g030440 | 29.932 | 147 | 97 | 2 | 56 | 196 | 21 | 167 | 2.35e-15 | 70.9 |
| MS.gene39638.t1 | MTR_4g132070 | 28.409 | 176 | 120 | 3 | 23 | 195 | 362 | 534 | 4.39e-15 | 73.2 |
| MS.gene39638.t1 | MTR_5g008705 | 34.959 | 123 | 78 | 1 | 65 | 185 | 2 | 124 | 6.26e-15 | 68.6 |
| MS.gene39638.t1 | MTR_1g055255 | 33.582 | 134 | 84 | 3 | 58 | 189 | 430 | 560 | 2.09e-14 | 71.2 |
| MS.gene39638.t1 | MTR_7g106710 | 28.824 | 170 | 114 | 3 | 23 | 189 | 406 | 571 | 2.86e-14 | 70.9 |
| MS.gene39638.t1 | MTR_1g041150 | 29.412 | 170 | 113 | 3 | 23 | 189 | 389 | 554 | 3.91e-14 | 70.5 |
| MS.gene39638.t1 | MTR_1g026190 | 28.889 | 135 | 90 | 3 | 58 | 189 | 388 | 519 | 6.38e-14 | 69.7 |
| MS.gene39638.t1 | MTR_3g098090 | 29.310 | 174 | 114 | 4 | 21 | 189 | 299 | 468 | 7.77e-14 | 69.3 |
| MS.gene39638.t1 | MTR_5g009830 | 33.088 | 136 | 83 | 3 | 58 | 189 | 372 | 503 | 9.43e-14 | 69.3 |
| MS.gene39638.t1 | MTR_4g107490 | 32.143 | 140 | 91 | 2 | 54 | 189 | 372 | 511 | 1.03e-13 | 69.3 |
| MS.gene39638.t1 | MTR_5g092810 | 33.083 | 133 | 87 | 2 | 58 | 189 | 398 | 529 | 1.24e-13 | 68.9 |
| MS.gene39638.t1 | MTR_3g083470 | 29.787 | 141 | 87 | 2 | 57 | 195 | 93 | 223 | 2.40e-13 | 66.6 |
| MS.gene39638.t1 | MTR_0028s0170 | 32.331 | 133 | 88 | 2 | 58 | 189 | 384 | 515 | 2.93e-13 | 67.8 |
| MS.gene39638.t1 | MTR_8g099095 | 33.083 | 133 | 87 | 2 | 58 | 189 | 372 | 503 | 2.99e-13 | 67.8 |
| MS.gene39638.t1 | MTR_3g098070 | 28.736 | 174 | 115 | 4 | 21 | 189 | 296 | 465 | 6.43e-13 | 66.6 |
| MS.gene39638.t1 | MTR_1g096490 | 32.593 | 135 | 84 | 4 | 58 | 189 | 336 | 466 | 7.58e-13 | 66.6 |
| MS.gene39638.t1 | MTR_7g074020 | 29.630 | 135 | 93 | 1 | 41 | 173 | 14 | 148 | 1.67e-12 | 62.8 |
| MS.gene39638.t1 | MTR_1g054865 | 29.412 | 170 | 113 | 4 | 23 | 189 | 432 | 597 | 4.84e-12 | 64.3 |
| MS.gene39638.t1 | MTR_8g095440 | 28.235 | 170 | 115 | 3 | 23 | 189 | 301 | 466 | 5.44e-12 | 63.9 |
| MS.gene39638.t1 | MTR_3g051770 | 30.216 | 139 | 90 | 3 | 58 | 189 | 389 | 527 | 5.94e-12 | 63.9 |
| MS.gene39638.t1 | MTR_5g099240 | 31.206 | 141 | 78 | 4 | 58 | 189 | 402 | 532 | 1.04e-11 | 63.2 |
| MS.gene39638.t1 | MTR_5g099240 | 31.206 | 141 | 78 | 4 | 58 | 189 | 330 | 460 | 1.09e-11 | 63.2 |
| MS.gene39638.t1 | MTR_4g082050 | 41.429 | 70 | 41 | 0 | 123 | 192 | 72 | 141 | 1.86e-11 | 59.7 |
| MS.gene39638.t1 | MTR_7g068710 | 29.412 | 170 | 107 | 5 | 27 | 189 | 331 | 494 | 2.68e-11 | 62.0 |
| MS.gene39638.t1 | MTR_3g088655 | 29.932 | 147 | 89 | 4 | 57 | 189 | 8 | 154 | 6.30e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39638.t1 | AT2G15680 | 59.896 | 192 | 70 | 1 | 1 | 192 | 1 | 185 | 1.72e-81 | 240 |
| MS.gene39638.t1 | AT1G24620 | 45.000 | 140 | 75 | 1 | 57 | 194 | 37 | 176 | 2.84e-34 | 120 |
| MS.gene39638.t1 | AT1G73630 | 45.324 | 139 | 73 | 2 | 53 | 190 | 15 | 151 | 1.80e-32 | 115 |
| MS.gene39638.t1 | AT1G18210 | 42.222 | 135 | 76 | 1 | 56 | 190 | 22 | 154 | 8.82e-30 | 108 |
| MS.gene39638.t1 | AT1G18210 | 42.222 | 135 | 76 | 1 | 56 | 190 | 22 | 154 | 8.82e-30 | 108 |
| MS.gene39638.t1 | AT1G66400 | 40.141 | 142 | 77 | 2 | 54 | 189 | 12 | 151 | 3.44e-29 | 106 |
| MS.gene39638.t1 | AT5G37770 | 39.583 | 144 | 81 | 1 | 54 | 191 | 14 | 157 | 4.55e-29 | 106 |
| MS.gene39638.t1 | AT5G37770 | 39.583 | 144 | 81 | 1 | 54 | 191 | 14 | 157 | 4.55e-29 | 106 |
| MS.gene39638.t1 | AT5G17470 | 39.552 | 134 | 77 | 1 | 61 | 190 | 6 | 139 | 2.19e-25 | 96.3 |
| MS.gene39638.t1 | AT5G17470 | 49.123 | 57 | 29 | 0 | 58 | 114 | 78 | 134 | 3.72e-11 | 58.9 |
| MS.gene39638.t1 | AT5G42380 | 36.691 | 139 | 85 | 1 | 54 | 189 | 46 | 184 | 3.23e-25 | 97.1 |
| MS.gene39638.t1 | AT3G07490 | 38.462 | 143 | 72 | 3 | 57 | 189 | 5 | 141 | 2.20e-24 | 94.0 |
| MS.gene39638.t1 | AT1G05990 | 39.130 | 138 | 79 | 2 | 57 | 189 | 5 | 142 | 3.34e-24 | 93.6 |
| MS.gene39638.t1 | AT4G12860 | 40.146 | 137 | 78 | 2 | 57 | 189 | 5 | 141 | 5.06e-24 | 93.2 |
| MS.gene39638.t1 | AT4G03290 | 38.571 | 140 | 79 | 2 | 57 | 189 | 5 | 144 | 2.92e-23 | 91.3 |
| MS.gene39638.t1 | AT2G36180 | 38.571 | 140 | 81 | 2 | 58 | 192 | 1 | 140 | 3.93e-23 | 90.5 |
| MS.gene39638.t1 | AT3G03400 | 36.000 | 125 | 74 | 2 | 61 | 180 | 9 | 132 | 4.82e-23 | 90.1 |
| MS.gene39638.t1 | AT2G43290 | 34.247 | 146 | 85 | 3 | 53 | 189 | 63 | 206 | 3.93e-22 | 89.7 |
| MS.gene39638.t1 | AT5G37780 | 35.766 | 137 | 86 | 1 | 55 | 189 | 10 | 146 | 1.44e-21 | 86.7 |
| MS.gene39638.t1 | AT1G66410 | 35.766 | 137 | 86 | 1 | 55 | 189 | 10 | 146 | 1.44e-21 | 86.7 |
| MS.gene39638.t1 | AT5G21274 | 36.496 | 137 | 85 | 1 | 55 | 189 | 10 | 146 | 1.82e-21 | 86.3 |
| MS.gene39638.t1 | AT1G76650 | 35.821 | 134 | 85 | 1 | 57 | 189 | 43 | 176 | 3.66e-21 | 86.3 |
| MS.gene39638.t1 | AT1G76650 | 35.821 | 134 | 85 | 1 | 57 | 189 | 43 | 176 | 3.66e-21 | 86.3 |
| MS.gene39638.t1 | AT3G43810 | 35.766 | 137 | 86 | 1 | 55 | 189 | 10 | 146 | 4.28e-21 | 85.5 |
| MS.gene39638.t1 | AT3G43810 | 35.766 | 137 | 86 | 1 | 55 | 189 | 10 | 146 | 6.27e-21 | 86.7 |
| MS.gene39638.t1 | AT2G27030 | 34.507 | 142 | 91 | 1 | 55 | 194 | 10 | 151 | 1.06e-20 | 85.1 |
| MS.gene39638.t1 | AT3G56800 | 35.036 | 137 | 87 | 1 | 55 | 189 | 10 | 146 | 1.59e-20 | 84.0 |
| MS.gene39638.t1 | AT2G27030 | 35.036 | 137 | 87 | 1 | 55 | 189 | 10 | 146 | 1.59e-20 | 84.0 |
| MS.gene39638.t1 | AT2G41110 | 35.036 | 137 | 87 | 1 | 55 | 189 | 10 | 146 | 1.59e-20 | 84.0 |
| MS.gene39638.t1 | AT2G41100 | 32.911 | 158 | 87 | 1 | 55 | 193 | 64 | 221 | 1.97e-20 | 86.7 |
| MS.gene39638.t1 | AT2G41100 | 30.303 | 132 | 74 | 1 | 82 | 195 | 2 | 133 | 5.75e-14 | 68.9 |
| MS.gene39638.t1 | AT2G41100 | 32.911 | 158 | 87 | 1 | 55 | 193 | 64 | 221 | 1.97e-20 | 86.7 |
| MS.gene39638.t1 | AT2G41100 | 30.303 | 132 | 74 | 1 | 82 | 195 | 2 | 133 | 5.75e-14 | 68.9 |
| MS.gene39638.t1 | AT2G41100 | 32.911 | 158 | 87 | 1 | 55 | 193 | 64 | 221 | 1.97e-20 | 86.7 |
| MS.gene39638.t1 | AT2G41100 | 30.303 | 132 | 74 | 1 | 82 | 195 | 2 | 133 | 5.75e-14 | 68.9 |
| MS.gene39638.t1 | AT1G18530 | 30.000 | 140 | 94 | 1 | 57 | 192 | 7 | 146 | 2.66e-20 | 83.6 |
| MS.gene39638.t1 | AT2G41100 | 32.911 | 158 | 87 | 1 | 55 | 193 | 99 | 256 | 3.13e-20 | 86.7 |
| MS.gene39638.t1 | AT2G41100 | 30.818 | 159 | 92 | 1 | 55 | 195 | 10 | 168 | 5.57e-19 | 83.2 |
| MS.gene39638.t1 | AT2G41100 | 32.911 | 158 | 87 | 1 | 55 | 193 | 99 | 256 | 3.13e-20 | 86.7 |
| MS.gene39638.t1 | AT2G41100 | 30.818 | 159 | 92 | 1 | 55 | 195 | 10 | 168 | 5.57e-19 | 83.2 |
| MS.gene39638.t1 | AT1G76640 | 32.692 | 156 | 88 | 3 | 44 | 189 | 10 | 158 | 2.28e-19 | 81.3 |
| MS.gene39638.t1 | AT2G41410 | 34.320 | 169 | 100 | 5 | 30 | 193 | 49 | 211 | 2.85e-19 | 82.4 |
| MS.gene39638.t1 | AT3G59440 | 33.803 | 142 | 79 | 3 | 57 | 189 | 51 | 186 | 3.42e-19 | 81.6 |
| MS.gene39638.t1 | AT3G10190 | 36.029 | 136 | 84 | 3 | 57 | 189 | 70 | 205 | 3.83e-19 | 81.6 |
| MS.gene39638.t1 | AT4G14640 | 34.815 | 135 | 86 | 1 | 57 | 189 | 13 | 147 | 6.18e-19 | 79.7 |
| MS.gene39638.t1 | AT2G41090 | 34.815 | 135 | 87 | 1 | 55 | 189 | 10 | 143 | 1.03e-18 | 80.1 |
| MS.gene39638.t1 | AT3G50770 | 32.143 | 196 | 107 | 6 | 9 | 190 | 21 | 204 | 1.06e-18 | 80.5 |
| MS.gene39638.t1 | AT3G25600 | 29.286 | 140 | 95 | 1 | 57 | 192 | 12 | 151 | 1.11e-18 | 79.3 |
| MS.gene39638.t1 | AT5G04870 | 32.941 | 170 | 107 | 3 | 23 | 189 | 421 | 586 | 3.04e-18 | 82.4 |
| MS.gene39638.t1 | AT3G22930 | 33.571 | 140 | 91 | 1 | 52 | 189 | 30 | 169 | 3.20e-18 | 78.6 |
| MS.gene39638.t1 | AT5G37780 | 35.537 | 121 | 76 | 1 | 71 | 189 | 13 | 133 | 5.72e-18 | 76.6 |
| MS.gene39638.t1 | AT1G66410 | 35.537 | 121 | 76 | 1 | 71 | 189 | 36 | 156 | 6.73e-18 | 77.4 |
| MS.gene39638.t1 | AT5G37780 | 35.537 | 121 | 76 | 1 | 71 | 189 | 52 | 172 | 6.92e-18 | 77.8 |
| MS.gene39638.t1 | AT5G37780 | 35.537 | 121 | 76 | 1 | 71 | 189 | 41 | 161 | 7.70e-18 | 77.4 |
| MS.gene39638.t1 | AT3G50360 | 34.058 | 138 | 89 | 1 | 57 | 192 | 27 | 164 | 1.06e-17 | 77.0 |
| MS.gene39638.t1 | AT2G41110 | 34.091 | 132 | 85 | 1 | 60 | 189 | 27 | 158 | 1.67e-17 | 76.3 |
| MS.gene39638.t1 | AT1G76650 | 33.582 | 134 | 78 | 2 | 57 | 189 | 43 | 166 | 2.79e-17 | 75.9 |
| MS.gene39638.t1 | AT1G32250 | 26.712 | 146 | 99 | 1 | 55 | 192 | 14 | 159 | 5.24e-17 | 75.1 |
| MS.gene39638.t1 | AT1G66410 | 36.364 | 110 | 68 | 1 | 82 | 189 | 1 | 110 | 1.07e-16 | 72.8 |
| MS.gene39638.t1 | AT1G66410 | 36.364 | 110 | 68 | 1 | 82 | 189 | 1 | 110 | 1.07e-16 | 72.8 |
| MS.gene39638.t1 | AT3G43810 | 36.364 | 110 | 68 | 1 | 82 | 189 | 1 | 110 | 2.67e-16 | 71.6 |
| MS.gene39638.t1 | AT3G43810 | 36.364 | 110 | 68 | 1 | 82 | 189 | 1 | 110 | 2.67e-16 | 71.6 |
| MS.gene39638.t1 | AT3G03410 | 33.588 | 131 | 80 | 1 | 59 | 189 | 4 | 127 | 3.19e-16 | 72.0 |
| MS.gene39638.t1 | AT3G10660 | 32.353 | 170 | 108 | 3 | 23 | 189 | 457 | 622 | 3.66e-16 | 76.3 |
| MS.gene39638.t1 | AT3G10660 | 32.353 | 170 | 108 | 3 | 23 | 189 | 457 | 622 | 3.66e-16 | 76.3 |
| MS.gene39638.t1 | AT4G14640 | 33.884 | 121 | 78 | 1 | 71 | 189 | 9 | 129 | 4.78e-16 | 71.6 |
| MS.gene39638.t1 | AT4G20780 | 31.977 | 172 | 92 | 5 | 42 | 189 | 13 | 183 | 7.75e-16 | 72.4 |
| MS.gene39638.t1 | AT4G37010 | 32.609 | 138 | 91 | 2 | 57 | 192 | 31 | 168 | 9.29e-16 | 72.0 |
| MS.gene39638.t1 | AT4G37010 | 32.609 | 138 | 91 | 2 | 57 | 192 | 27 | 164 | 9.80e-16 | 71.6 |
| MS.gene39638.t1 | AT3G03000 | 31.206 | 141 | 94 | 1 | 55 | 192 | 18 | 158 | 1.80e-15 | 70.9 |
| MS.gene39638.t1 | AT2G41100 | 33.333 | 129 | 67 | 1 | 84 | 193 | 3 | 131 | 2.35e-15 | 71.6 |
| MS.gene39638.t1 | AT5G44460 | 33.133 | 166 | 92 | 7 | 41 | 189 | 11 | 174 | 3.28e-15 | 70.9 |
| MS.gene39638.t1 | AT3G51920 | 31.343 | 134 | 90 | 1 | 61 | 192 | 16 | 149 | 4.89e-15 | 69.7 |
| MS.gene39638.t1 | AT4G04695 | 34.586 | 133 | 85 | 2 | 58 | 189 | 337 | 468 | 5.39e-15 | 72.8 |
| MS.gene39638.t1 | AT5G23580 | 33.083 | 133 | 86 | 3 | 58 | 189 | 328 | 458 | 6.81e-15 | 72.4 |
| MS.gene39638.t1 | AT1G18890 | 31.098 | 164 | 112 | 1 | 27 | 189 | 338 | 501 | 7.02e-15 | 72.4 |
| MS.gene39638.t1 | AT4G04700 | 33.835 | 133 | 86 | 2 | 58 | 189 | 337 | 468 | 9.30e-15 | 72.0 |
| MS.gene39638.t1 | AT4G04720 | 31.852 | 135 | 86 | 3 | 58 | 189 | 385 | 516 | 1.34e-14 | 71.6 |
| MS.gene39638.t1 | AT4G04720 | 31.852 | 135 | 86 | 3 | 58 | 189 | 385 | 516 | 1.34e-14 | 71.6 |
| MS.gene39638.t1 | AT1G21550 | 34.228 | 149 | 86 | 4 | 54 | 191 | 7 | 154 | 1.38e-14 | 68.6 |
| MS.gene39638.t1 | AT4G23650 | 33.083 | 133 | 87 | 2 | 58 | 189 | 384 | 515 | 3.23e-14 | 70.5 |
| MS.gene39638.t1 | AT5G12480 | 35.294 | 136 | 82 | 3 | 58 | 189 | 271 | 404 | 6.29e-14 | 69.7 |
| MS.gene39638.t1 | AT5G12480 | 35.294 | 136 | 82 | 3 | 58 | 189 | 365 | 498 | 9.53e-14 | 69.3 |
| MS.gene39638.t1 | AT4G09570 | 32.593 | 135 | 84 | 4 | 58 | 189 | 331 | 461 | 1.44e-13 | 68.6 |
| MS.gene39638.t1 | AT1G35670 | 32.593 | 135 | 84 | 4 | 58 | 189 | 332 | 462 | 2.80e-13 | 67.8 |
| MS.gene39638.t1 | AT1G50700 | 30.370 | 135 | 88 | 3 | 58 | 189 | 379 | 510 | 6.35e-13 | 67.0 |
| MS.gene39638.t1 | AT5G12180 | 32.353 | 136 | 84 | 3 | 58 | 189 | 379 | 510 | 7.15e-13 | 66.6 |
| MS.gene39638.t1 | AT5G19360 | 32.353 | 136 | 84 | 3 | 58 | 189 | 374 | 505 | 7.40e-13 | 66.6 |
| MS.gene39638.t1 | AT4G38230 | 31.724 | 145 | 80 | 4 | 58 | 193 | 360 | 494 | 1.08e-12 | 66.2 |
| MS.gene39638.t1 | AT4G38230 | 31.724 | 145 | 80 | 4 | 58 | 193 | 186 | 320 | 1.13e-12 | 65.9 |
| MS.gene39638.t1 | AT4G38230 | 31.724 | 145 | 80 | 4 | 58 | 193 | 330 | 464 | 1.18e-12 | 66.2 |
| MS.gene39638.t1 | AT4G38230 | 31.724 | 145 | 80 | 4 | 58 | 193 | 330 | 464 | 1.18e-12 | 66.2 |
| MS.gene39638.t1 | AT4G04710 | 31.579 | 133 | 89 | 2 | 58 | 189 | 338 | 469 | 1.19e-12 | 65.9 |
| MS.gene39638.t1 | AT4G04710 | 31.579 | 133 | 89 | 2 | 58 | 189 | 324 | 455 | 1.31e-12 | 65.9 |
| MS.gene39638.t1 | AT4G21940 | 31.111 | 135 | 87 | 3 | 58 | 189 | 407 | 538 | 1.31e-12 | 65.9 |
| MS.gene39638.t1 | AT4G21940 | 31.111 | 135 | 87 | 3 | 58 | 189 | 407 | 538 | 1.32e-12 | 65.9 |
| MS.gene39638.t1 | AT3G51850 | 27.439 | 164 | 118 | 1 | 27 | 189 | 329 | 492 | 1.39e-12 | 65.9 |
| MS.gene39638.t1 | AT2G17290 | 31.618 | 136 | 84 | 4 | 58 | 189 | 391 | 521 | 1.63e-12 | 65.9 |
| MS.gene39638.t1 | AT2G17290 | 31.618 | 136 | 84 | 4 | 58 | 189 | 391 | 521 | 1.63e-12 | 65.9 |
| MS.gene39638.t1 | AT4G04710 | 31.579 | 133 | 89 | 2 | 58 | 189 | 351 | 482 | 1.80e-12 | 65.5 |
| MS.gene39638.t1 | AT1G74740 | 31.429 | 140 | 92 | 2 | 54 | 189 | 358 | 497 | 3.91e-12 | 64.7 |
| MS.gene39638.t1 | AT3G20410 | 29.630 | 135 | 89 | 3 | 58 | 189 | 397 | 528 | 7.61e-12 | 63.9 |
| MS.gene39638.t1 | AT3G20410 | 29.630 | 135 | 89 | 3 | 58 | 189 | 397 | 528 | 7.61e-12 | 63.9 |
| MS.gene39638.t1 | AT4G04740 | 28.148 | 135 | 91 | 3 | 58 | 189 | 374 | 505 | 2.56e-11 | 62.0 |
| MS.gene39638.t1 | AT4G04740 | 28.148 | 135 | 91 | 3 | 58 | 189 | 374 | 505 | 2.56e-11 | 62.0 |
| MS.gene39638.t1 | AT4G04740 | 28.148 | 135 | 91 | 3 | 58 | 189 | 374 | 505 | 2.56e-11 | 62.0 |
| MS.gene39638.t1 | AT4G04740 | 28.148 | 135 | 91 | 3 | 58 | 189 | 374 | 505 | 2.56e-11 | 62.0 |
| MS.gene39638.t1 | AT4G04740 | 28.148 | 135 | 91 | 3 | 58 | 189 | 374 | 505 | 2.56e-11 | 62.0 |
| MS.gene39638.t1 | AT4G04740 | 28.148 | 135 | 91 | 3 | 58 | 189 | 374 | 505 | 2.56e-11 | 62.0 |
| MS.gene39638.t1 | AT4G04710 | 31.852 | 135 | 88 | 3 | 58 | 189 | 351 | 484 | 2.57e-11 | 62.0 |
| MS.gene39638.t1 | AT2G38910 | 28.409 | 176 | 117 | 4 | 19 | 189 | 399 | 570 | 2.69e-11 | 62.0 |
| MS.gene39638.t1 | AT5G19450 | 34.559 | 136 | 83 | 3 | 58 | 189 | 363 | 496 | 2.78e-11 | 62.0 |
| MS.gene39638.t1 | AT5G19450 | 34.559 | 136 | 83 | 3 | 58 | 189 | 363 | 496 | 2.78e-11 | 62.0 |
| MS.gene39638.t1 | AT3G57530 | 34.351 | 131 | 80 | 3 | 62 | 189 | 373 | 500 | 5.90e-11 | 61.2 |
| MS.gene39638.t1 | AT1G61950 | 30.216 | 139 | 89 | 3 | 55 | 189 | 402 | 536 | 7.97e-11 | 60.8 |
Find 52 sgRNAs with CRISPR-Local
Find 56 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAATTTCGAAGAATTTA+TGG | 0.163356 | 4.2:-24632900 | MS.gene39638:CDS |
| TCTCCATGCCTAGAGATTTC+AGG | 0.242652 | 4.2:+24632981 | None:intergenic |
| AGAAGAAGGGTGGCGGGATT+AGG | 0.344511 | 4.2:-24632871 | MS.gene39638:CDS |
| TTCTCTTTGAGAGGTTGTAT+TGG | 0.359751 | 4.2:+24633197 | None:intergenic |
| TAAAGAAATGTTGTGGAAGC+TGG | 0.364619 | 4.2:-24632777 | MS.gene39638:CDS |
| ATCTCTAGGCATGGAGAAAT+CGG | 0.392953 | 4.2:-24632975 | MS.gene39638:CDS |
| AGAGGTTGTATTGGAAATCA+AGG | 0.420314 | 4.2:+24633206 | None:intergenic |
| AAATTTGATTCCAATAAAGA+TGG | 0.423505 | 4.2:-24633034 | MS.gene39638:CDS |
| AGATGGGAAAATATCTCAAC+AGG | 0.423802 | 4.2:-24633017 | MS.gene39638:CDS |
| TTTCGAACATTTGATAAGAA+TGG | 0.431044 | 4.2:-24632827 | MS.gene39638:CDS |
| CTCCATGCCTAGAGATTTCA+GGG | 0.434046 | 4.2:+24632982 | None:intergenic |
| ATTTATGGAGGCACAGAAGA+AGG | 0.474383 | 4.2:-24632885 | MS.gene39638:CDS |
| TCAAAGGACAAACAGAACTC+TGG | 0.476930 | 4.2:-24633145 | MS.gene39638:CDS |
| TTTCGGGTGGTTGACTTGGA+TGG | 0.482059 | 4.2:-24632932 | MS.gene39638:CDS |
| GTGGTTGACTTGGATGGAGA+TGG | 0.497520 | 4.2:-24632926 | MS.gene39638:CDS |
| TCAGGTACTTTCTCTTTGAG+AGG | 0.501193 | 4.2:+24633188 | None:intergenic |
| CAAAGGACAAACAGAACTCT+GGG | 0.507659 | 4.2:-24633144 | MS.gene39638:CDS |
| GGTTGACATGAACGAGTTTG+TGG | 0.509979 | 4.2:-24632687 | MS.gene39638:CDS |
| ACATTTGATAAGAATGGTGA+TGG | 0.510358 | 4.2:-24632821 | MS.gene39638:CDS |
| AGAGTCGTGACGGCTTCCTC+AGG | 0.512598 | 4.2:+24633170 | None:intergenic |
| GGTGCAGCCTTGAGGACTGC+AGG | 0.514632 | 4.2:-24632748 | MS.gene39638:CDS |
| TCAAAGAACAGACAAAACTC+TGG | 0.529354 | 4.2:-24633109 | MS.gene39638:CDS |
| GAGGCACAGAAGAAGGGTGG+CGG | 0.540486 | 4.2:-24632878 | MS.gene39638:CDS |
| CAGCATTCAAACATGTCTCA+TGG | 0.541379 | 4.2:+24632649 | None:intergenic |
| AAAGCTACCCTGAAATCTCT+AGG | 0.549647 | 4.2:-24632989 | MS.gene39638:CDS |
| AGGCACAGAAGAAGGGTGGC+GGG | 0.550603 | 4.2:-24632877 | MS.gene39638:CDS |
| TCTCATGGATTGAGTCATCA+TGG | 0.558622 | 4.2:+24632664 | None:intergenic |
| AATTTGATTCCAATAAAGAT+GGG | 0.558831 | 4.2:-24633033 | MS.gene39638:CDS |
| TCCTTTGAGAAGAGTCGTGA+CGG | 0.561303 | 4.2:+24633160 | None:intergenic |
| CCATTCGCCTGCAGTCCTCA+AGG | 0.565957 | 4.2:+24632741 | None:intergenic |
| GGGTGGCGGGATTAGGTCGT+TGG | 0.568531 | 4.2:-24632864 | MS.gene39638:CDS |
| CCTTGAGGACTGCAGGCGAA+TGG | 0.569437 | 4.2:-24632741 | MS.gene39638:CDS |
| AAGAAATTAAAGAAATGTTG+TGG | 0.574845 | 4.2:-24632784 | MS.gene39638:CDS |
| CAAAGAACAGACAAAACTCT+GGG | 0.588758 | 4.2:-24633108 | MS.gene39638:CDS |
| TACCCTGAAATCTCTAGGCA+TGG | 0.589415 | 4.2:-24632984 | MS.gene39638:CDS |
| TGTTGTGGAAGCTGGAAGAA+AGG | 0.589500 | 4.2:-24632769 | MS.gene39638:CDS |
| ACACCATCTTCATCTCATCA+AGG | 0.589556 | 4.2:+24633062 | None:intergenic |
| GAAGCTCTCATAAAATGTCA+AGG | 0.593326 | 4.2:-24633237 | None:intergenic |
| ATCTTCATCTCATCAAGGCT+AGG | 0.593507 | 4.2:+24633067 | None:intergenic |
| GGAAGAAAGGTGCAGCCTTG+AGG | 0.598195 | 4.2:-24632756 | MS.gene39638:CDS |
| CAGGCGAATGGTGAGAGCAG+TGG | 0.606356 | 4.2:-24632729 | MS.gene39638:CDS |
| TTTATGGAGGCACAGAAGAA+GGG | 0.608726 | 4.2:-24632884 | MS.gene39638:CDS |
| GTGAGAGCAGTGGACACTGA+TGG | 0.611578 | 4.2:-24632719 | MS.gene39638:CDS |
| GCAGTGGACACTGATGGAGA+TGG | 0.626893 | 4.2:-24632713 | MS.gene39638:CDS |
| GCCGTCACGACTCTTCTCAA+AGG | 0.629350 | 4.2:-24633161 | MS.gene39638:CDS |
| CAATTTCGAAGAATTTATGG+AGG | 0.644323 | 4.2:-24632897 | MS.gene39638:CDS |
| CATTTGATAAGAATGGTGAT+GGG | 0.644649 | 4.2:-24632820 | MS.gene39638:CDS |
| TAGCCTTGATGAGATGAAGA+TGG | 0.657485 | 4.2:-24633065 | MS.gene39638:CDS |
| GGACACTGATGGAGATGGCA+TGG | 0.659167 | 4.2:-24632708 | MS.gene39638:CDS |
| TCTCAAAGAGAAAGTACCTG+AGG | 0.659784 | 4.2:-24633186 | MS.gene39638:CDS |
| ATGGAGGCACAGAAGAAGGG+TGG | 0.680107 | 4.2:-24632881 | MS.gene39638:CDS |
| AAAGGACAAACAGAACTCTG+GGG | 0.762759 | 4.2:-24633143 | MS.gene39638:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTGATTCCAATAAAGA+TGG | - | chr4.2:24632844-24632863 | MS.gene39638:CDS | 20.0% |
| !! | AAGAAATTAAAGAAATGTTG+TGG | - | chr4.2:24633094-24633113 | MS.gene39638:CDS | 20.0% |
| !! | AATTTGATTCCAATAAAGAT+GGG | - | chr4.2:24632845-24632864 | MS.gene39638:CDS | 20.0% |
| ! | CATCAATTTCGAAGAATTTA+TGG | - | chr4.2:24632978-24632997 | MS.gene39638:CDS | 25.0% |
| ! | TTTCGAACATTTGATAAGAA+TGG | - | chr4.2:24633051-24633070 | MS.gene39638:CDS | 25.0% |
| !! | AGATATTTTCCCATCTTTAT+TGG | + | chr4.2:24632857-24632876 | None:intergenic | 25.0% |
| ACATTTGATAAGAATGGTGA+TGG | - | chr4.2:24633057-24633076 | MS.gene39638:CDS | 30.0% | |
| CAATTTCGAAGAATTTATGG+AGG | - | chr4.2:24632981-24633000 | MS.gene39638:CDS | 30.0% | |
| CATTTGATAAGAATGGTGAT+GGG | - | chr4.2:24633058-24633077 | MS.gene39638:CDS | 30.0% | |
| !! | ATGAAGTGCCACATATTTTT+CGG | - | chr4.2:24632929-24632948 | MS.gene39638:CDS | 30.0% |
| AGAGGTTGTATTGGAAATCA+AGG | + | chr4.2:24632675-24632694 | None:intergenic | 35.0% | |
| AGATGGGAAAATATCTCAAC+AGG | - | chr4.2:24632861-24632880 | MS.gene39638:CDS | 35.0% | |
| CAAAGAACAGACAAAACTCT+GGG | - | chr4.2:24632770-24632789 | MS.gene39638:CDS | 35.0% | |
| TAAAGAAATGTTGTGGAAGC+TGG | - | chr4.2:24633101-24633120 | MS.gene39638:CDS | 35.0% | |
| TCAAAGAACAGACAAAACTC+TGG | - | chr4.2:24632769-24632788 | MS.gene39638:CDS | 35.0% | |
| ! | TTCTCTTTGAGAGGTTGTAT+TGG | + | chr4.2:24632684-24632703 | None:intergenic | 35.0% |
| !! | TGAAGTGCCACATATTTTTC+GGG | - | chr4.2:24632930-24632949 | MS.gene39638:CDS | 35.0% |
| AAAGCTACCCTGAAATCTCT+AGG | - | chr4.2:24632889-24632908 | MS.gene39638:CDS | 40.0% | |
| AAAGGACAAACAGAACTCTG+GGG | - | chr4.2:24632735-24632754 | MS.gene39638:CDS | 40.0% | |
| ACACCATCTTCATCTCATCA+AGG | + | chr4.2:24632819-24632838 | None:intergenic | 40.0% | |
| ATCTCTAGGCATGGAGAAAT+CGG | - | chr4.2:24632903-24632922 | MS.gene39638:CDS | 40.0% | |
| ATCTTCATCTCATCAAGGCT+AGG | + | chr4.2:24632814-24632833 | None:intergenic | 40.0% | |
| CAAAGGACAAACAGAACTCT+GGG | - | chr4.2:24632734-24632753 | MS.gene39638:CDS | 40.0% | |
| TCAAAGGACAAACAGAACTC+TGG | - | chr4.2:24632733-24632752 | MS.gene39638:CDS | 40.0% | |
| TCAACCACCCGAAAAATATG+TGG | + | chr4.2:24632940-24632959 | None:intergenic | 40.0% | |
| TCAGGTACTTTCTCTTTGAG+AGG | + | chr4.2:24632693-24632712 | None:intergenic | 40.0% | |
| ! | ATTTATGGAGGCACAGAAGA+AGG | - | chr4.2:24632993-24633012 | MS.gene39638:CDS | 40.0% |
| ! | TAGCCTTGATGAGATGAAGA+TGG | - | chr4.2:24632813-24632832 | MS.gene39638:CDS | 40.0% |
| ! | TCTCATGGATTGAGTCATCA+TGG | + | chr4.2:24633217-24633236 | None:intergenic | 40.0% |
| ! | TTTATGGAGGCACAGAAGAA+GGG | - | chr4.2:24632994-24633013 | MS.gene39638:CDS | 40.0% |
| !! | TCTCAAAGAGAAAGTACCTG+AGG | - | chr4.2:24632692-24632711 | MS.gene39638:CDS | 40.0% |
| !!! | TATTTTTCGGGTGGTTGACT+TGG | - | chr4.2:24632942-24632961 | MS.gene39638:CDS | 40.0% |
| CTCCATGCCTAGAGATTTCA+GGG | + | chr4.2:24632899-24632918 | None:intergenic | 45.0% | |
| GGTTGACATGAACGAGTTTG+TGG | - | chr4.2:24633191-24633210 | MS.gene39638:CDS | 45.0% | |
| TACCCTGAAATCTCTAGGCA+TGG | - | chr4.2:24632894-24632913 | MS.gene39638:CDS | 45.0% | |
| TCTCCATGCCTAGAGATTTC+AGG | + | chr4.2:24632900-24632919 | None:intergenic | 45.0% | |
| TGTTGTGGAAGCTGGAAGAA+AGG | - | chr4.2:24633109-24633128 | MS.gene39638:CDS | 45.0% | |
| ! | TCCTTTGAGAAGAGTCGTGA+CGG | + | chr4.2:24632721-24632740 | None:intergenic | 45.0% |
| !!! | AGTGCCACATATTTTTCGGG+TGG | - | chr4.2:24632933-24632952 | MS.gene39638:CDS | 45.0% |
| !! | GTGGTTGACTTGGATGGAGA+TGG | - | chr4.2:24632952-24632971 | MS.gene39638:CDS | 50.0% |
| !! | TTTCGGGTGGTTGACTTGGA+TGG | - | chr4.2:24632946-24632965 | MS.gene39638:CDS | 50.0% |
| GCAGTGGACACTGATGGAGA+TGG | - | chr4.2:24633165-24633184 | MS.gene39638:CDS | 55.0% | |
| GCCGTCACGACTCTTCTCAA+AGG | - | chr4.2:24632717-24632736 | MS.gene39638:CDS | 55.0% | |
| GGACACTGATGGAGATGGCA+TGG | - | chr4.2:24633170-24633189 | MS.gene39638:CDS | 55.0% | |
| GTGAGAGCAGTGGACACTGA+TGG | - | chr4.2:24633159-24633178 | MS.gene39638:CDS | 55.0% | |
| ! | ATGGAGGCACAGAAGAAGGG+TGG | - | chr4.2:24632997-24633016 | MS.gene39638:CDS | 55.0% |
| ! | GGAAGAAAGGTGCAGCCTTG+AGG | - | chr4.2:24633122-24633141 | MS.gene39638:CDS | 55.0% |
| !! | AGAAGAAGGGTGGCGGGATT+AGG | - | chr4.2:24633007-24633026 | MS.gene39638:CDS | 55.0% |
| AGAGTCGTGACGGCTTCCTC+AGG | + | chr4.2:24632711-24632730 | None:intergenic | 60.0% | |
| AGGCACAGAAGAAGGGTGGC+GGG | - | chr4.2:24633001-24633020 | MS.gene39638:CDS | 60.0% | |
| CAGGCGAATGGTGAGAGCAG+TGG | - | chr4.2:24633149-24633168 | MS.gene39638:CDS | 60.0% | |
| CCATTCGCCTGCAGTCCTCA+AGG | + | chr4.2:24633140-24633159 | None:intergenic | 60.0% | |
| CCTTGAGGACTGCAGGCGAA+TGG | - | chr4.2:24633137-24633156 | MS.gene39638:CDS | 60.0% | |
| GAGGCACAGAAGAAGGGTGG+CGG | - | chr4.2:24633000-24633019 | MS.gene39638:CDS | 60.0% | |
| GGTGCAGCCTTGAGGACTGC+AGG | - | chr4.2:24633130-24633149 | MS.gene39638:CDS | 65.0% | |
| !! | GGGTGGCGGGATTAGGTCGT+TGG | - | chr4.2:24633014-24633033 | MS.gene39638:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 24632655 | 24633245 | 24632655 | ID=MS.gene39638 |
| chr4.2 | mRNA | 24632655 | 24633245 | 24632655 | ID=MS.gene39638.t1;Parent=MS.gene39638 |
| chr4.2 | exon | 24632655 | 24633245 | 24632655 | ID=MS.gene39638.t1.exon1;Parent=MS.gene39638.t1 |
| chr4.2 | CDS | 24632655 | 24633245 | 24632655 | ID=cds.MS.gene39638.t1;Parent=MS.gene39638.t1 |
| Gene Sequence |
| Protein sequence |
