Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81230.t1 | XP_003617948.1 | 99.6 | 265 | 1 | 0 | 1 | 265 | 1 | 265 | 9.00E-154 | 552.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81230.t1 | P27520 | 96.6 | 265 | 9 | 0 | 1 | 265 | 1 | 265 | 7.7e-154 | 544.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81230.t1 | G7KEN2 | 99.6 | 265 | 1 | 0 | 1 | 265 | 1 | 265 | 6.5e-154 | 552.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene81230 | 0.845632 | 3.60E-59 | -1.69E-46 |
| MS.gene049173 | MS.gene81230 | 0.820573 | 6.39E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene81230 | -0.819324 | 1.23E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene81230 | 0.837033 | 6.60E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene81230 | 0.845703 | 3.44E-59 | -1.69E-46 |
| MS.gene049232 | MS.gene81230 | 0.886359 | 3.66E-72 | -1.69E-46 |
| MS.gene049259 | MS.gene81230 | -0.811705 | 6.12E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene81230 | 0.901689 | 2.08E-78 | -1.69E-46 |
| MS.gene049313 | MS.gene81230 | -0.818626 | 1.78E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene81230 | 0.928813 | 1.70E-92 | -1.69E-46 |
| MS.gene049600 | MS.gene81230 | 0.841893 | 3.60E-58 | -1.69E-46 |
| MS.gene049633 | MS.gene81230 | 0.826177 | 3.13E-54 | -1.69E-46 |
| MS.gene04986 | MS.gene81230 | -0.813925 | 2.00E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene81230 | 0.906059 | 2.22E-80 | -1.69E-46 |
| MS.gene050163 | MS.gene81230 | 0.880214 | 6.60E-70 | -1.69E-46 |
| MS.gene050165 | MS.gene81230 | 0.89506 | 1.37E-75 | -1.69E-46 |
| MS.gene050170 | MS.gene81230 | 0.827875 | 1.23E-54 | -1.69E-46 |
| MS.gene050173 | MS.gene81230 | -0.824844 | 6.47E-54 | -1.69E-46 |
| MS.gene050216 | MS.gene81230 | 0.865016 | 8.01E-65 | -1.69E-46 |
| MS.gene050323 | MS.gene81230 | 0.862695 | 4.22E-64 | -1.69E-46 |
| MS.gene050333 | MS.gene81230 | 0.871047 | 9.20E-67 | -1.69E-46 |
| MS.gene050381 | MS.gene81230 | -0.800338 | 1.51E-48 | -1.69E-46 |
| MS.gene050496 | MS.gene81230 | 0.888395 | 6.13E-73 | -1.69E-46 |
| MS.gene050504 | MS.gene81230 | 0.908591 | 1.45E-81 | -1.69E-46 |
| MS.gene050518 | MS.gene81230 | 0.905343 | 4.75E-80 | -1.69E-46 |
| MS.gene050577 | MS.gene81230 | 0.835312 | 1.81E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene81230 | 0.930571 | 1.35E-93 | -1.69E-46 |
| MS.gene050662 | MS.gene81230 | 0.823242 | 1.54E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene81230 | 0.893661 | 5.11E-75 | -1.69E-46 |
| MS.gene050699 | MS.gene81230 | 0.886595 | 2.98E-72 | -1.69E-46 |
| MS.gene050772 | MS.gene81230 | 0.852293 | 5.08E-61 | -1.69E-46 |
| MS.gene05080 | MS.gene81230 | 0.821417 | 4.08E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene81230 | 0.856979 | 2.23E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene81230 | 0.855907 | 4.60E-62 | -1.69E-46 |
| MS.gene050876 | MS.gene81230 | 0.879023 | 1.75E-69 | -1.69E-46 |
| MS.gene05087 | MS.gene81230 | 0.804215 | 2.40E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene81230 | 0.82177 | 3.38E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene81230 | 0.930897 | 8.37E-94 | -1.69E-46 |
| MS.gene05100 | MS.gene81230 | 0.825697 | 4.07E-54 | -1.69E-46 |
| MS.gene051127 | MS.gene81230 | -0.824198 | 9.19E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene81230 | 0.843116 | 1.71E-58 | -1.69E-46 |
| MS.gene051317 | MS.gene81230 | 0.840548 | 8.14E-58 | -1.69E-46 |
| MS.gene051366 | MS.gene81230 | -0.801755 | 7.75E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene81230 | 0.830504 | 2.83E-55 | -1.69E-46 |
| MS.gene051551 | MS.gene81230 | 0.871311 | 7.53E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene81230 | 0.895077 | 1.35E-75 | -1.69E-46 |
| MS.gene051949 | MS.gene81230 | 0.844926 | 5.59E-59 | -1.69E-46 |
| MS.gene052004 | MS.gene81230 | 0.80218 | 6.34E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene81230 | 0.831253 | 1.85E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene81230 | 0.82547 | 4.61E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene81230 | 0.841857 | 3.68E-58 | -1.69E-46 |
| MS.gene052486 | MS.gene81230 | 0.844694 | 6.45E-59 | -1.69E-46 |
| MS.gene052822 | MS.gene81230 | 0.824054 | 9.94E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene81230 | 0.848742 | 5.05E-60 | -1.69E-46 |
| MS.gene052966 | MS.gene81230 | 0.835509 | 1.61E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene81230 | 0.822612 | 2.16E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene81230 | 0.858193 | 9.75E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene81230 | 0.866096 | 3.66E-65 | -1.69E-46 |
| MS.gene053420 | MS.gene81230 | -0.825121 | 5.57E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene81230 | -0.827562 | 1.46E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene81230 | 0.829803 | 4.20E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene81230 | 0.81501 | 1.15E-51 | -1.69E-46 |
| MS.gene053633 | MS.gene81230 | 0.815362 | 9.61E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene81230 | 0.821635 | 3.63E-53 | -1.69E-46 |
| MS.gene054056 | MS.gene81230 | -0.815009 | 1.15E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene81230 | 0.82308 | 1.68E-53 | -1.69E-46 |
| MS.gene054600 | MS.gene81230 | 0.849762 | 2.63E-60 | -1.69E-46 |
| MS.gene054616 | MS.gene81230 | -0.816861 | 4.45E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene81230 | 0.892883 | 1.05E-74 | -1.69E-46 |
| MS.gene05470 | MS.gene81230 | 0.830681 | 2.56E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene81230 | 0.93051 | 1.48E-93 | -1.69E-46 |
| MS.gene055154 | MS.gene81230 | -0.823777 | 1.15E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene81230 | 0.912785 | 1.31E-83 | -1.69E-46 |
| MS.gene055502 | MS.gene81230 | 0.858789 | 6.47E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene81230 | 0.8486 | 5.53E-60 | -1.69E-46 |
| MS.gene055634 | MS.gene81230 | 0.868535 | 6.07E-66 | -1.69E-46 |
| MS.gene055638 | MS.gene81230 | 0.831033 | 2.10E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene81230 | 0.836092 | 1.15E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene81230 | 0.847719 | 9.68E-60 | -1.69E-46 |
| MS.gene055750 | MS.gene81230 | 0.85415 | 1.49E-61 | -1.69E-46 |
| MS.gene055751 | MS.gene81230 | 0.873441 | 1.47E-67 | -1.69E-46 |
| MS.gene055776 | MS.gene81230 | 0.95783 | 1.05E-115 | -1.69E-46 |
| MS.gene055849 | MS.gene81230 | 0.866481 | 2.76E-65 | -1.69E-46 |
| MS.gene05589 | MS.gene81230 | 0.848491 | 5.92E-60 | -1.69E-46 |
| MS.gene055942 | MS.gene81230 | -0.848094 | 7.63E-60 | -1.69E-46 |
| MS.gene056046 | MS.gene81230 | 0.837553 | 4.86E-57 | -1.69E-46 |
| MS.gene056185 | MS.gene81230 | -0.811983 | 5.33E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene81230 | 0.846001 | 2.86E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene81230 | 0.910681 | 1.43E-82 | -1.69E-46 |
| MS.gene056510 | MS.gene81230 | 0.902493 | 9.17E-79 | -1.69E-46 |
| MS.gene056657 | MS.gene81230 | 0.914864 | 1.16E-84 | -1.69E-46 |
| MS.gene056692 | MS.gene81230 | 0.80909 | 2.25E-50 | -1.69E-46 |
| MS.gene056761 | MS.gene81230 | -0.830843 | 2.34E-55 | -1.69E-46 |
| MS.gene056910 | MS.gene81230 | 0.817355 | 3.44E-52 | -1.69E-46 |
| MS.gene057014 | MS.gene81230 | -0.817319 | 3.51E-52 | -1.69E-46 |
| MS.gene057148 | MS.gene81230 | 0.813284 | 2.77E-51 | -1.69E-46 |
| MS.gene05753 | MS.gene81230 | 0.802603 | 5.19E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene81230 | 0.819315 | 1.24E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene81230 | 0.808758 | 2.65E-50 | -1.69E-46 |
| MS.gene057872 | MS.gene81230 | 0.83477 | 2.47E-56 | -1.69E-46 |
| MS.gene057986 | MS.gene81230 | 0.812469 | 4.17E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene81230 | -0.805836 | 1.10E-49 | -1.69E-46 |
| MS.gene058269 | MS.gene81230 | -0.804736 | 1.87E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene81230 | -0.811242 | 7.72E-51 | -1.69E-46 |
| MS.gene058335 | MS.gene81230 | 0.806539 | 7.83E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene81230 | 0.88786 | 9.84E-73 | -1.69E-46 |
| MS.gene058544 | MS.gene81230 | 0.807022 | 6.19E-50 | -1.69E-46 |
| MS.gene058719 | MS.gene81230 | 0.842772 | 2.11E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene81230 | 0.852984 | 3.23E-61 | -1.69E-46 |
| MS.gene058773 | MS.gene81230 | 0.884752 | 1.47E-71 | -1.69E-46 |
| MS.gene05884 | MS.gene81230 | -0.806976 | 6.33E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene81230 | 0.928115 | 4.55E-92 | -1.69E-46 |
| MS.gene059023 | MS.gene81230 | 0.819286 | 1.26E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene81230 | 0.814725 | 1.33E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene81230 | 0.847338 | 1.23E-59 | -1.69E-46 |
| MS.gene059367 | MS.gene81230 | 0.824219 | 9.09E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene81230 | 0.90367 | 2.73E-79 | -1.69E-46 |
| MS.gene059701 | MS.gene81230 | -0.810183 | 1.31E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene81230 | 0.862745 | 4.08E-64 | -1.69E-46 |
| MS.gene059756 | MS.gene81230 | 0.800656 | 1.30E-48 | -1.69E-46 |
| MS.gene059837 | MS.gene81230 | 0.8487 | 5.19E-60 | -1.69E-46 |
| MS.gene059865 | MS.gene81230 | 0.928188 | 4.11E-92 | -1.69E-46 |
| MS.gene06000 | MS.gene81230 | 0.81299 | 3.21E-51 | -1.69E-46 |
| MS.gene06012 | MS.gene81230 | -0.811872 | 5.63E-51 | -1.69E-46 |
| MS.gene060337 | MS.gene81230 | -0.835874 | 1.30E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene81230 | 0.830113 | 3.53E-55 | -1.69E-46 |
| MS.gene060526 | MS.gene81230 | 0.803354 | 3.63E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene81230 | -0.813481 | 2.50E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene81230 | 0.906721 | 1.10E-80 | -1.69E-46 |
| MS.gene060762 | MS.gene81230 | 0.861879 | 7.52E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene81230 | 0.868091 | 8.45E-66 | -1.69E-46 |
| MS.gene06077 | MS.gene81230 | 0.874268 | 7.71E-68 | -1.69E-46 |
| MS.gene060982 | MS.gene81230 | 0.886364 | 3.65E-72 | -1.69E-46 |
| MS.gene061134 | MS.gene81230 | 0.807447 | 5.03E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene81230 | 0.80877 | 2.63E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81230 | MS.gene20443 | PPI |
| MS.gene023132 | MS.gene81230 | PPI |
| MS.gene38214 | MS.gene81230 | PPI |
| MS.gene81230 | MS.gene023132 | PPI |
| MS.gene81230 | MS.gene38046 | PPI |
| MS.gene99767 | MS.gene81230 | PPI |
| MS.gene031028 | MS.gene81230 | PPI |
| MS.gene81230 | MS.gene020883 | PPI |
| MS.gene81230 | MS.gene031028 | PPI |
| MS.gene20446 | MS.gene81230 | PPI |
| MS.gene20444 | MS.gene81230 | PPI |
| MS.gene81230 | MS.gene028321 | PPI |
| MS.gene81230 | MS.gene031030 | PPI |
| MS.gene81230 | MS.gene20444 | PPI |
| MS.gene81230 | MS.gene35137 | PPI |
| MS.gene38046 | MS.gene81230 | PPI |
| MS.gene81230 | MS.gene88379 | PPI |
| MS.gene81230 | MS.gene38214 | PPI |
| MS.gene81230 | MS.gene031016 | PPI |
| MS.gene36470 | MS.gene81230 | PPI |
| MS.gene031016 | MS.gene81230 | PPI |
| MS.gene81230 | MS.gene031355 | PPI |
| MS.gene81230 | MS.gene20445 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81230.t1 | MTR_5g097280 | 99.623 | 265 | 1 | 0 | 1 | 265 | 1 | 265 | 0.0 | 540 |
| MS.gene81230.t1 | MTR_4g094605 | 82.500 | 240 | 38 | 1 | 30 | 265 | 27 | 266 | 6.49e-149 | 417 |
| MS.gene81230.t1 | MTR_6g012080 | 75.373 | 268 | 60 | 3 | 1 | 265 | 1 | 265 | 1.05e-147 | 414 |
| MS.gene81230.t1 | MTR_6g011870 | 82.500 | 240 | 39 | 2 | 29 | 265 | 26 | 265 | 4.16e-147 | 412 |
| MS.gene81230.t1 | MTR_6g011880 | 82.083 | 240 | 40 | 2 | 29 | 265 | 26 | 265 | 6.82e-147 | 412 |
| MS.gene81230.t1 | MTR_6g011890 | 83.404 | 235 | 36 | 2 | 34 | 265 | 31 | 265 | 1.21e-146 | 411 |
| MS.gene81230.t1 | MTR_6g012110 | 75.281 | 267 | 58 | 3 | 2 | 265 | 4 | 265 | 6.43e-145 | 407 |
| MS.gene81230.t1 | MTR_2g081090 | 70.076 | 264 | 66 | 6 | 5 | 265 | 11 | 264 | 3.23e-124 | 354 |
| MS.gene81230.t1 | MTR_2g081090 | 78.027 | 223 | 45 | 4 | 46 | 265 | 16 | 237 | 1.18e-121 | 347 |
| MS.gene81230.t1 | MTR_6g043600 | 71.489 | 235 | 47 | 1 | 31 | 265 | 15 | 229 | 4.14e-119 | 340 |
| MS.gene81230.t1 | MTR_6g060175 | 54.067 | 209 | 87 | 4 | 49 | 253 | 71 | 274 | 3.56e-62 | 197 |
| MS.gene81230.t1 | MTR_1g026550 | 45.817 | 251 | 118 | 7 | 17 | 253 | 76 | 322 | 6.63e-62 | 198 |
| MS.gene81230.t1 | MTR_6g060175 | 52.153 | 209 | 81 | 5 | 49 | 253 | 71 | 264 | 7.32e-56 | 181 |
| MS.gene81230.t1 | MTR_5g098785 | 42.857 | 217 | 89 | 10 | 62 | 253 | 63 | 269 | 5.17e-37 | 132 |
| MS.gene81230.t1 | MTR_5g098780 | 41.935 | 217 | 91 | 9 | 62 | 253 | 61 | 267 | 2.32e-36 | 130 |
| MS.gene81230.t1 | MTR_3g101670 | 41.146 | 192 | 99 | 4 | 66 | 249 | 68 | 253 | 6.64e-36 | 129 |
| MS.gene81230.t1 | MTR_8g023790 | 37.069 | 232 | 107 | 9 | 34 | 249 | 48 | 256 | 8.50e-36 | 129 |
| MS.gene81230.t1 | MTR_6g033320 | 39.655 | 232 | 102 | 9 | 27 | 253 | 35 | 233 | 2.12e-35 | 127 |
| MS.gene81230.t1 | MTR_2g042720 | 36.444 | 225 | 109 | 9 | 52 | 260 | 60 | 266 | 1.30e-31 | 117 |
| MS.gene81230.t1 | MTR_1g026550 | 39.490 | 157 | 90 | 4 | 16 | 168 | 75 | 230 | 2.34e-29 | 111 |
| MS.gene81230.t1 | MTR_3g435460 | 34.826 | 201 | 97 | 6 | 66 | 252 | 63 | 243 | 1.07e-27 | 107 |
| MS.gene81230.t1 | MTR_4g015570 | 42.593 | 162 | 72 | 7 | 93 | 250 | 134 | 278 | 1.74e-25 | 102 |
| MS.gene81230.t1 | MTR_3g435460 | 33.505 | 194 | 95 | 6 | 73 | 252 | 9 | 182 | 2.42e-24 | 97.1 |
| MS.gene81230.t1 | MTR_3g070340 | 44.371 | 151 | 63 | 8 | 93 | 239 | 137 | 270 | 8.99e-21 | 89.4 |
| MS.gene81230.t1 | MTR_5g098770 | 54.054 | 74 | 33 | 1 | 181 | 253 | 13 | 86 | 4.10e-20 | 82.8 |
| MS.gene81230.t1 | MTR_2g008610 | 32.850 | 207 | 89 | 7 | 66 | 242 | 73 | 259 | 1.57e-17 | 80.1 |
| MS.gene81230.t1 | MTR_2g436960 | 48.438 | 64 | 29 | 1 | 189 | 252 | 33 | 92 | 2.62e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81230.t1 | AT2G05100 | 86.792 | 265 | 35 | 0 | 1 | 265 | 1 | 265 | 2.73e-176 | 486 |
| MS.gene81230.t1 | AT2G05070 | 86.038 | 265 | 37 | 0 | 1 | 265 | 1 | 265 | 2.32e-175 | 484 |
| MS.gene81230.t1 | AT3G27690 | 85.714 | 266 | 37 | 1 | 1 | 265 | 33 | 298 | 1.22e-173 | 481 |
| MS.gene81230.t1 | AT3G27690 | 85.714 | 266 | 37 | 1 | 1 | 265 | 1 | 266 | 2.25e-173 | 479 |
| MS.gene81230.t1 | AT2G05100 | 86.920 | 237 | 31 | 0 | 1 | 237 | 1 | 237 | 7.15e-153 | 429 |
| MS.gene81230.t1 | AT2G34420 | 75.746 | 268 | 55 | 3 | 2 | 265 | 4 | 265 | 5.00e-144 | 404 |
| MS.gene81230.t1 | AT1G29920 | 76.119 | 268 | 56 | 3 | 2 | 265 | 4 | 267 | 5.93e-144 | 404 |
| MS.gene81230.t1 | AT1G29910 | 76.119 | 268 | 56 | 3 | 2 | 265 | 4 | 267 | 5.93e-144 | 404 |
| MS.gene81230.t1 | AT1G29930 | 75.836 | 269 | 55 | 4 | 2 | 265 | 4 | 267 | 9.71e-144 | 404 |
| MS.gene81230.t1 | AT2G34430 | 76.119 | 268 | 55 | 5 | 2 | 265 | 4 | 266 | 7.27e-143 | 402 |
| MS.gene81230.t1 | AT5G54270 | 67.293 | 266 | 75 | 6 | 2 | 264 | 8 | 264 | 2.94e-121 | 347 |
| MS.gene81230.t1 | AT1G76570 | 44.776 | 268 | 129 | 7 | 2 | 256 | 62 | 323 | 2.68e-62 | 199 |
| MS.gene81230.t1 | AT4G10340 | 52.632 | 209 | 90 | 5 | 49 | 253 | 62 | 265 | 1.76e-57 | 185 |
| MS.gene81230.t1 | AT1G45474 | 41.969 | 193 | 97 | 4 | 66 | 249 | 56 | 242 | 5.30e-38 | 134 |
| MS.gene81230.t1 | AT1G45474 | 41.969 | 193 | 97 | 4 | 66 | 249 | 56 | 242 | 5.30e-38 | 134 |
| MS.gene81230.t1 | AT1G61520 | 40.486 | 247 | 107 | 12 | 32 | 253 | 34 | 265 | 6.74e-38 | 134 |
| MS.gene81230.t1 | AT1G61520 | 40.486 | 247 | 107 | 12 | 32 | 253 | 34 | 265 | 6.74e-38 | 134 |
| MS.gene81230.t1 | AT3G54890 | 43.367 | 196 | 91 | 6 | 63 | 253 | 52 | 232 | 9.97e-37 | 130 |
| MS.gene81230.t1 | AT3G61470 | 39.024 | 205 | 109 | 6 | 52 | 249 | 50 | 245 | 3.88e-36 | 129 |
| MS.gene81230.t1 | AT1G61520 | 42.308 | 208 | 85 | 10 | 72 | 254 | 14 | 211 | 1.81e-33 | 121 |
| MS.gene81230.t1 | AT1G19150 | 34.222 | 225 | 114 | 7 | 52 | 260 | 63 | 269 | 1.53e-29 | 112 |
| MS.gene81230.t1 | AT3G47470 | 38.342 | 193 | 101 | 6 | 66 | 252 | 64 | 244 | 2.27e-28 | 108 |
| MS.gene81230.t1 | AT3G08940 | 34.201 | 269 | 107 | 12 | 33 | 250 | 27 | 276 | 3.18e-26 | 104 |
| MS.gene81230.t1 | AT3G54890 | 41.875 | 160 | 74 | 5 | 63 | 218 | 52 | 196 | 3.80e-25 | 99.8 |
| MS.gene81230.t1 | AT5G01530 | 41.212 | 165 | 76 | 7 | 93 | 253 | 135 | 282 | 4.79e-25 | 101 |
| MS.gene81230.t1 | AT2G40100 | 43.137 | 153 | 67 | 7 | 93 | 242 | 136 | 271 | 7.08e-23 | 95.1 |
| MS.gene81230.t1 | AT3G54890 | 35.233 | 193 | 77 | 5 | 63 | 253 | 52 | 198 | 2.01e-22 | 92.4 |
| MS.gene81230.t1 | AT1G15820 | 30.916 | 262 | 123 | 9 | 15 | 242 | 19 | 256 | 5.35e-18 | 81.3 |
| MS.gene81230.t1 | AT5G28450 | 52.941 | 68 | 30 | 2 | 184 | 249 | 94 | 161 | 4.89e-14 | 68.9 |
| MS.gene81230.t1 | AT3G54890 | 43.182 | 88 | 42 | 2 | 63 | 149 | 52 | 132 | 2.18e-11 | 61.2 |
Find 108 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTTCCTTGCAAAGGTTTC+AGG | 0.102826 | 5.2:-81650385 | None:intergenic |
| AGAGGGTGGCCTTGACTATT+TGG | 0.205421 | 5.2:+81650540 | MS.gene81230:CDS |
| CGGTGAGGCTGTGTGGTTTA+AGG | 0.263630 | 5.2:+81650498 | MS.gene81230:CDS |
| TTTGTTCAAGCCATTGTTAC+TGG | 0.264682 | 5.2:+81650805 | MS.gene81230:CDS |
| CTCAGAGCATTCTTGCAATC+TGG | 0.295339 | 5.2:+81650584 | MS.gene81230:CDS |
| CTCTGAGCATGGATCAGGTT+TGG | 0.324151 | 5.2:-81650568 | None:intergenic |
| GTCTTGGCGTTCTCATTGTC+CGG | 0.330962 | 5.2:-81650911 | None:intergenic |
| GAGGGTGGCCTTGACTATTT+GGG | 0.336583 | 5.2:+81650541 | MS.gene81230:CDS |
| TTGGCTATGTTCTCCATGTT+TGG | 0.341425 | 5.2:+81650778 | MS.gene81230:CDS |
| TTCAACTCTGCGAATGCATC+AGG | 0.344835 | 5.2:-81650730 | None:intergenic |
| GGCCACCCTCTGAGAAGATC+TGG | 0.347970 | 5.2:-81650528 | None:intergenic |
| CCCTGACCGTCCCAAGTACT+TGG | 0.361481 | 5.2:+81650276 | MS.gene81230:CDS |
| TTGTTTCAAACCAGTCTTGC+CGG | 0.363409 | 5.2:-81649836 | None:intergenic |
| GGTGAGTTTCCTGGTGACTA+TGG | 0.365981 | 5.2:+81650334 | MS.gene81230:CDS |
| CCGTTCTTCTCAAGGATCTC+AGG | 0.374661 | 5.2:-81650466 | None:intergenic |
| TACTTGACTGGTGAGTTTCC+TGG | 0.393901 | 5.2:+81650325 | MS.gene81230:CDS |
| GCCCATGCGTTGTTGGCGAC+AGG | 0.394359 | 5.2:-81650868 | None:intergenic |
| GGCTACACAGGTTGTGCTCA+TGG | 0.400913 | 5.2:+81650606 | MS.gene81230:CDS |
| CCCAAGTACTTGGGACGGTC+AGG | 0.404268 | 5.2:-81650277 | None:intergenic |
| TCTGAGCATGGATCAGGTTT+GGG | 0.410646 | 5.2:-81650567 | None:intergenic |
| GAGAAGAACGGTGTTAAATT+CGG | 0.410939 | 5.2:+81650478 | MS.gene81230:CDS |
| TCTTGGCGTTCTCATTGTCC+GGG | 0.416065 | 5.2:-81650910 | None:intergenic |
| TGGTCGTAAAGGTTCTGAAC+AGG | 0.417502 | 5.2:-81650835 | None:intergenic |
| TGCCGGTGAATGCTGATTGT+TGG | 0.417954 | 5.2:-81649819 | None:intergenic |
| TGGGCTATGCTTGGTGCATT+GGG | 0.418579 | 5.2:+81650433 | MS.gene81230:CDS |
| GGTGGTGCCTTTGACCCTCT+TGG | 0.419230 | 5.2:+81650694 | MS.gene81230:CDS |
| AGCATATGCCCATGCGTTGT+TGG | 0.419884 | 5.2:-81650875 | None:intergenic |
| GTGCTCATGGGATTTGTTGA+AGG | 0.427865 | 5.2:+81650619 | MS.gene81230:CDS |
| ATGGGCTATGCTTGGTGCAT+TGG | 0.428620 | 5.2:+81650432 | MS.gene81230:CDS |
| AACAAGGAAATGAGTTCATC+AGG | 0.436049 | 5.2:+81649854 | MS.gene81230:CDS |
| AGAGTGCTCCTGAGAGCATT+TGG | 0.436155 | 5.2:+81649926 | MS.gene81230:CDS |
| ATCAGGAAAGCTGGTAACTT+TGG | 0.441484 | 5.2:+81649871 | MS.gene81230:CDS |
| TGATGCATTCGCAGAGTTGA+AGG | 0.448661 | 5.2:+81650732 | MS.gene81230:CDS |
| AGAGAATGGACCCAAGTACT+TGG | 0.454278 | 5.2:-81650287 | None:intergenic |
| GAATGCTCTGAGCATGGATC+AGG | 0.464537 | 5.2:-81650573 | None:intergenic |
| TCAGAGCATTCTTGCAATCT+GGG | 0.473136 | 5.2:+81650585 | MS.gene81230:CDS |
| ACCCTGTCGCCAACAACGCA+TGG | 0.473833 | 5.2:+81650866 | MS.gene81230:CDS |
| TCAGCATTCACCGGCAAGAC+TGG | 0.481069 | 5.2:+81649826 | MS.gene81230:CDS |
| TTGAAGTAATTCACAGCAGA+TGG | 0.482906 | 5.2:+81650413 | MS.gene81230:CDS |
| AAGGCACCACCAGGGTATAG+TGG | 0.492859 | 5.2:-81650682 | None:intergenic |
| GTTGAAGGCTACAGAGTTGG+TGG | 0.494755 | 5.2:+81650634 | MS.gene81230:CDS |
| CACAGCAGATGGGCTATGCT+TGG | 0.495212 | 5.2:+81650424 | MS.gene81230:CDS |
| AACTCACCAGTCAAGTATGA+TGG | 0.498383 | 5.2:-81650319 | None:intergenic |
| AGTTTCCTGGTGACTATGGA+TGG | 0.502040 | 5.2:+81650338 | MS.gene81230:CDS |
| GATGGAATTTGCTCAGAGAA+TGG | 0.503528 | 5.2:-81650301 | None:intergenic |
| CAAGCCATTGTTACTGGCAA+GGG | 0.504441 | 5.2:+81650811 | MS.gene81230:CDS |
| AAGCTCACGGTTCCTTGCAA+AGG | 0.505875 | 5.2:-81650392 | None:intergenic |
| AATGAGTTCATCAGGAAAGC+TGG | 0.507285 | 5.2:+81649862 | MS.gene81230:CDS |
| ATTTAACACCGTTCTTCTCA+AGG | 0.517683 | 5.2:-81650474 | None:intergenic |
| GCTACACAGGTTGTGCTCAT+GGG | 0.523866 | 5.2:+81650607 | MS.gene81230:CDS |
| GACTATGGATGGGACACAGC+TGG | 0.528763 | 5.2:+81650349 | MS.gene81230:CDS |
| GGTCAGCAACATGGTCGTAA+AGG | 0.529520 | 5.2:-81650846 | None:intergenic |
| CCCATGCGTTGTTGGCGACA+GGG | 0.536409 | 5.2:-81650867 | None:intergenic |
| ACTACTTACCAAATGCTCTC+AGG | 0.536679 | 5.2:-81649934 | None:intergenic |
| CCCTGTCGCCAACAACGCAT+GGG | 0.536908 | 5.2:+81650867 | MS.gene81230:CDS |
| AGCAAGACCAAGAGGGTCAA+AGG | 0.536924 | 5.2:-81650701 | None:intergenic |
| TCAAGCCATTGTTACTGGCA+AGG | 0.539300 | 5.2:+81650810 | MS.gene81230:CDS |
| CAAATTCCATCATACTTGAC+TGG | 0.540774 | 5.2:+81650313 | MS.gene81230:CDS |
| CGTTCTTCTCAAGGATCTCA+GGG | 0.541586 | 5.2:-81650465 | None:intergenic |
| AGAGGGTCAAAGGCACCACC+AGG | 0.542069 | 5.2:-81650691 | None:intergenic |
| GCCCAGATCTTCTCAGAGGG+TGG | 0.543898 | 5.2:+81650526 | MS.gene81230:CDS |
| TTTGTTGAAGGCTACAGAGT+TGG | 0.545933 | 5.2:+81650631 | MS.gene81230:CDS |
| TCTTGCAATCTGGGCTACAC+AGG | 0.546344 | 5.2:+81650594 | MS.gene81230:CDS |
| CCTGACCGTCCCAAGTACTT+GGG | 0.552290 | 5.2:+81650277 | MS.gene81230:CDS |
| AGAGTTGGTGGAGGACCACT+TGG | 0.559575 | 5.2:+81650646 | MS.gene81230:CDS |
| GGAACTCAAGAACGGCCGAT+TGG | 0.563130 | 5.2:+81650759 | MS.gene81230:CDS |
| GAGGCTGTGTGGTTTAAGGC+TGG | 0.563162 | 5.2:+81650502 | MS.gene81230:CDS |
| GGTGCCCAGATCTTCTCAGA+GGG | 0.564509 | 5.2:+81650523 | MS.gene81230:CDS |
| TTGCAAGAATGCTCTGAGCA+TGG | 0.570179 | 5.2:-81650579 | None:intergenic |
| GCCACCCTCTGAGAAGATCT+GGG | 0.573456 | 5.2:-81650527 | None:intergenic |
| ATCCAACAATCAGCATTCAC+CGG | 0.576154 | 5.2:+81649817 | MS.gene81230:CDS |
| ACATGGAGAACATAGCCAAT+CGG | 0.576833 | 5.2:-81650774 | None:intergenic |
| GGCAAGACTGGTTTGAAACA+AGG | 0.588152 | 5.2:+81649838 | MS.gene81230:CDS |
| AGGCACCACCAGGGTATAGT+GGG | 0.590141 | 5.2:-81650681 | None:intergenic |
| CCTGAGATCCTTGAGAAGAA+CGG | 0.593147 | 5.2:+81650466 | MS.gene81230:CDS |
| TGATTGTTGGATTGCAGAGG+TGG | 0.593510 | 5.2:-81649806 | None:intergenic |
| TGGCGACAGGGTCAGCAACA+TGG | 0.597357 | 5.2:-81650855 | None:intergenic |
| AGGGCCCTTGCCAGTAACAA+TGG | 0.597695 | 5.2:-81650815 | None:intergenic |
| CCAAGTACTTGGGACGGTCA+GGG | 0.599166 | 5.2:-81650276 | None:intergenic |
| GAGAATGGACCCAAGTACTT+GGG | 0.599574 | 5.2:-81650286 | None:intergenic |
| TTGGGTTGCCCAAATAGTCA+AGG | 0.608462 | 5.2:-81650549 | None:intergenic |
| TGAAGTAATTCACAGCAGAT+GGG | 0.611387 | 5.2:+81650414 | MS.gene81230:CDS |
| GTGTCCCATCCATAGTCACC+AGG | 0.613151 | 5.2:-81650343 | None:intergenic |
| CTGATCCTGAAACCTTTGCA+AGG | 0.615014 | 5.2:+81650380 | MS.gene81230:CDS |
| TGGTGCCCAGATCTTCTCAG+AGG | 0.616548 | 5.2:+81650522 | MS.gene81230:CDS |
| TATGCTACTAACTTCGTCCC+CGG | 0.620877 | 5.2:+81650892 | MS.gene81230:CDS |
| GGTGGAGGACCACTTGGTGA+AGG | 0.624859 | 5.2:+81650652 | MS.gene81230:CDS |
| GGGTCTAGTCCTTCACCAAG+TGG | 0.625944 | 5.2:-81650661 | None:intergenic |
| TCAACTCTGCGAATGCATCA+GGG | 0.627212 | 5.2:-81650729 | None:intergenic |
| GGGTCATCAGCAAGACCAAG+AGG | 0.629020 | 5.2:-81650709 | None:intergenic |
| GGTCGTAAAGGTTCTGAACA+GGG | 0.631913 | 5.2:-81650834 | None:intergenic |
| ACTCTTCACAGTACGACGCA+TGG | 0.636134 | 5.2:-81649908 | None:intergenic |
| CTTCTCAAGGATCTCAGGGA+AGG | 0.637864 | 5.2:-81650461 | None:intergenic |
| TGCTGATTGTTGGATTGCAG+AGG | 0.642666 | 5.2:-81649809 | None:intergenic |
| ATTCGCAGAGTTGAAGGTCA+AGG | 0.644022 | 5.2:+81650738 | MS.gene81230:CDS |
| AAGGTCAAGGAACTCAAGAA+CGG | 0.645041 | 5.2:+81650751 | MS.gene81230:CDS |
| TGTGAATTACTTCAAGCTCA+CGG | 0.646318 | 5.2:-81650405 | None:intergenic |
| GAAGGCTACAGAGTTGGTGG+AGG | 0.651701 | 5.2:+81650637 | MS.gene81230:CDS |
| CTTGGCGTTCTCATTGTCCG+GGG | 0.655135 | 5.2:-81650909 | None:intergenic |
| TTAAATTCGGTGAGGCTGTG+TGG | 0.662485 | 5.2:+81650491 | MS.gene81230:CDS |
| ATGGACCCAAGTACTTGGGA+CGG | 0.662771 | 5.2:-81650282 | None:intergenic |
| GGACTAGACCCACTATACCC+TGG | 0.675418 | 5.2:+81650673 | MS.gene81230:CDS |
| GGTCATCAGCAAGACCAAGA+GGG | 0.676366 | 5.2:-81650708 | None:intergenic |
| GTTTCCTGGTGACTATGGAT+GGG | 0.694385 | 5.2:+81650339 | MS.gene81230:CDS |
| GAACGGTGTTAAATTCGGTG+AGG | 0.717704 | 5.2:+81650483 | MS.gene81230:CDS |
| GAGGGTCAAAGGCACCACCA+GGG | 0.717882 | 5.2:-81650690 | None:intergenic |
| TTGAACAAAGAAACCAAACA+TGG | 0.730913 | 5.2:-81650791 | None:intergenic |
| CTAGACCCACTATACCCTGG+TGG | 0.775578 | 5.2:+81650676 | MS.gene81230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAATGTTAATAACTAAC+TGG | + | chr5.2:81650110-81650129 | MS.gene81230:intron | 20.0% |
| !!! | TTGTTTTCATATATTTGACT+TGG | + | chr5.2:81650225-81650244 | MS.gene81230:intron | 20.0% |
| !! | ATGTGCTAATATTTGAAGTA+AGG | + | chr5.2:81650192-81650211 | MS.gene81230:intron | 25.0% |
| TTGAACAAAGAAACCAAACA+TGG | - | chr5.2:81650794-81650813 | None:intergenic | 30.0% | |
| !!! | TATGATCTGTTTTGAAAACC+AGG | + | chr5.2:81650248-81650267 | MS.gene81230:intron | 30.0% |
| AACAAGGAAATGAGTTCATC+AGG | + | chr5.2:81649854-81649873 | MS.gene81230:CDS | 35.0% | |
| ATTTAACACCGTTCTTCTCA+AGG | - | chr5.2:81650477-81650496 | None:intergenic | 35.0% | |
| CAAATTCCATCATACTTGAC+TGG | + | chr5.2:81650313-81650332 | MS.gene81230:CDS | 35.0% | |
| CAAGAGTCATGATGAGATAA+AGG | - | chr5.2:81650013-81650032 | None:intergenic | 35.0% | |
| TGAAGTAATTCACAGCAGAT+GGG | + | chr5.2:81650414-81650433 | MS.gene81230:CDS | 35.0% | |
| TGTGAATTACTTCAAGCTCA+CGG | - | chr5.2:81650408-81650427 | None:intergenic | 35.0% | |
| TTGAAGTAATTCACAGCAGA+TGG | + | chr5.2:81650413-81650432 | MS.gene81230:CDS | 35.0% | |
| TTTGTTCAAGCCATTGTTAC+TGG | + | chr5.2:81650805-81650824 | MS.gene81230:CDS | 35.0% | |
| ! | GAGAAGAACGGTGTTAAATT+CGG | + | chr5.2:81650478-81650497 | MS.gene81230:CDS | 35.0% |
| !!! | ACCTGCGTAATTTTAGCTTT+TGG | - | chr5.2:81650073-81650092 | None:intergenic | 35.0% |
| !!! | CCTGCGTAATTTTAGCTTTT+GGG | - | chr5.2:81650072-81650091 | None:intergenic | 35.0% |
| !!! | TCTGTTTTGAAAACCAGGTA+TGG | + | chr5.2:81650253-81650272 | MS.gene81230:intron | 35.0% |
| AACTCACCAGTCAAGTATGA+TGG | - | chr5.2:81650322-81650341 | None:intergenic | 40.0% | |
| AAGGTCAAGGAACTCAAGAA+CGG | + | chr5.2:81650751-81650770 | MS.gene81230:CDS | 40.0% | |
| AATGAGTTCATCAGGAAAGC+TGG | + | chr5.2:81649862-81649881 | MS.gene81230:CDS | 40.0% | |
| ACATGGAGAACATAGCCAAT+CGG | - | chr5.2:81650777-81650796 | None:intergenic | 40.0% | |
| ACTACTTACCAAATGCTCTC+AGG | - | chr5.2:81649937-81649956 | None:intergenic | 40.0% | |
| ATCAGGAAAGCTGGTAACTT+TGG | + | chr5.2:81649871-81649890 | MS.gene81230:CDS | 40.0% | |
| ATCCAACAATCAGCATTCAC+CGG | + | chr5.2:81649817-81649836 | MS.gene81230:CDS | 40.0% | |
| CCCAAAAGCTAAAATTACGC+AGG | + | chr5.2:81650069-81650088 | MS.gene81230:intron | 40.0% | |
| TTGGCTATGTTCTCCATGTT+TGG | + | chr5.2:81650778-81650797 | MS.gene81230:CDS | 40.0% | |
| TTGTTTCAAACCAGTCTTGC+CGG | - | chr5.2:81649839-81649858 | None:intergenic | 40.0% | |
| TTTGTTGAAGGCTACAGAGT+TGG | + | chr5.2:81650631-81650650 | MS.gene81230:CDS | 40.0% | |
| ! | GATGGAATTTGCTCAGAGAA+TGG | - | chr5.2:81650304-81650323 | None:intergenic | 40.0% |
| ! | TCAGAGCATTCTTGCAATCT+GGG | + | chr5.2:81650585-81650604 | MS.gene81230:CDS | 40.0% |
| AGAGAATGGACCCAAGTACT+TGG | - | chr5.2:81650290-81650309 | None:intergenic | 45.0% | |
| AGTTTCCTGGTGACTATGGA+TGG | + | chr5.2:81650338-81650357 | MS.gene81230:CDS | 45.0% | |
| ATTCGCAGAGTTGAAGGTCA+AGG | + | chr5.2:81650738-81650757 | MS.gene81230:CDS | 45.0% | |
| CAAGCCATTGTTACTGGCAA+GGG | + | chr5.2:81650811-81650830 | MS.gene81230:CDS | 45.0% | |
| CCTGAGATCCTTGAGAAGAA+CGG | + | chr5.2:81650466-81650485 | MS.gene81230:CDS | 45.0% | |
| CGTTCTTCTCAAGGATCTCA+GGG | - | chr5.2:81650468-81650487 | None:intergenic | 45.0% | |
| CTGATCCTGAAACCTTTGCA+AGG | + | chr5.2:81650380-81650399 | MS.gene81230:CDS | 45.0% | |
| GAGAATGGACCCAAGTACTT+GGG | - | chr5.2:81650289-81650308 | None:intergenic | 45.0% | |
| GTTTCCTGGTGACTATGGAT+GGG | + | chr5.2:81650339-81650358 | MS.gene81230:CDS | 45.0% | |
| TACTTGACTGGTGAGTTTCC+TGG | + | chr5.2:81650325-81650344 | MS.gene81230:CDS | 45.0% | |
| TATGCTACTAACTTCGTCCC+CGG | + | chr5.2:81650892-81650911 | MS.gene81230:CDS | 45.0% | |
| TCAACTCTGCGAATGCATCA+GGG | - | chr5.2:81650732-81650751 | None:intergenic | 45.0% | |
| TCAAGCCATTGTTACTGGCA+AGG | + | chr5.2:81650810-81650829 | MS.gene81230:CDS | 45.0% | |
| TCTGAGCATGGATCAGGTTT+GGG | - | chr5.2:81650570-81650589 | None:intergenic | 45.0% | |
| TGATGCATTCGCAGAGTTGA+AGG | + | chr5.2:81650732-81650751 | MS.gene81230:CDS | 45.0% | |
| TGATTGTTGGATTGCAGAGG+TGG | - | chr5.2:81649809-81649828 | None:intergenic | 45.0% | |
| TTCAACTCTGCGAATGCATC+AGG | - | chr5.2:81650733-81650752 | None:intergenic | 45.0% | |
| ! | CTCAGAGCATTCTTGCAATC+TGG | + | chr5.2:81650584-81650603 | MS.gene81230:CDS | 45.0% |
| ! | GAACGGTGTTAAATTCGGTG+AGG | + | chr5.2:81650483-81650502 | MS.gene81230:CDS | 45.0% |
| ! | TGCTGATTGTTGGATTGCAG+AGG | - | chr5.2:81649812-81649831 | None:intergenic | 45.0% |
| ! | TTAAATTCGGTGAGGCTGTG+TGG | + | chr5.2:81650491-81650510 | MS.gene81230:CDS | 45.0% |
| ! | TTGCAAGAATGCTCTGAGCA+TGG | - | chr5.2:81650582-81650601 | None:intergenic | 45.0% |
| ! | TTGGGTTGCCCAAATAGTCA+AGG | - | chr5.2:81650552-81650571 | None:intergenic | 45.0% |
| !! | GGCAAGACTGGTTTGAAACA+AGG | + | chr5.2:81649838-81649857 | MS.gene81230:CDS | 45.0% |
| !! | GGTCGTAAAGGTTCTGAACA+GGG | - | chr5.2:81650837-81650856 | None:intergenic | 45.0% |
| !! | GTGCTCATGGGATTTGTTGA+AGG | + | chr5.2:81650619-81650638 | MS.gene81230:CDS | 45.0% |
| !! | TGGTCGTAAAGGTTCTGAAC+AGG | - | chr5.2:81650838-81650857 | None:intergenic | 45.0% |
| AAGCTCACGGTTCCTTGCAA+AGG | - | chr5.2:81650395-81650414 | None:intergenic | 50.0% | |
| ACTCTTCACAGTACGACGCA+TGG | - | chr5.2:81649911-81649930 | None:intergenic | 50.0% | |
| AGCAAGACCAAGAGGGTCAA+AGG | - | chr5.2:81650704-81650723 | None:intergenic | 50.0% | |
| AGCATATGCCCATGCGTTGT+TGG | - | chr5.2:81650878-81650897 | None:intergenic | 50.0% | |
| ATGGACCCAAGTACTTGGGA+CGG | - | chr5.2:81650285-81650304 | None:intergenic | 50.0% | |
| CCGTTCTTCTCAAGGATCTC+AGG | - | chr5.2:81650469-81650488 | None:intergenic | 50.0% | |
| CGGTTCCTTGCAAAGGTTTC+AGG | - | chr5.2:81650388-81650407 | None:intergenic | 50.0% | |
| CTCTGAGCATGGATCAGGTT+TGG | - | chr5.2:81650571-81650590 | None:intergenic | 50.0% | |
| CTTCTCAAGGATCTCAGGGA+AGG | - | chr5.2:81650464-81650483 | None:intergenic | 50.0% | |
| GCTACACAGGTTGTGCTCAT+GGG | + | chr5.2:81650607-81650626 | MS.gene81230:CDS | 50.0% | |
| GGTCAGCAACATGGTCGTAA+AGG | - | chr5.2:81650849-81650868 | None:intergenic | 50.0% | |
| GGTCATCAGCAAGACCAAGA+GGG | - | chr5.2:81650711-81650730 | None:intergenic | 50.0% | |
| GGTGAGTTTCCTGGTGACTA+TGG | + | chr5.2:81650334-81650353 | MS.gene81230:CDS | 50.0% | |
| GTTGAAGGCTACAGAGTTGG+TGG | + | chr5.2:81650634-81650653 | MS.gene81230:CDS | 50.0% | |
| TCTTGCAATCTGGGCTACAC+AGG | + | chr5.2:81650594-81650613 | MS.gene81230:CDS | 50.0% | |
| ! | AGAGGGTGGCCTTGACTATT+TGG | + | chr5.2:81650540-81650559 | MS.gene81230:CDS | 50.0% |
| ! | GAATGCTCTGAGCATGGATC+AGG | - | chr5.2:81650576-81650595 | None:intergenic | 50.0% |
| ! | GAGGGTGGCCTTGACTATTT+GGG | + | chr5.2:81650541-81650560 | MS.gene81230:CDS | 50.0% |
| ! | TGCCGGTGAATGCTGATTGT+TGG | - | chr5.2:81649822-81649841 | None:intergenic | 50.0% |
| !! | AGAGTGCTCCTGAGAGCATT+TGG | + | chr5.2:81649926-81649945 | MS.gene81230:CDS | 50.0% |
| !! | ATGGGCTATGCTTGGTGCAT+TGG | + | chr5.2:81650432-81650451 | MS.gene81230:CDS | 50.0% |
| !! | TGGGCTATGCTTGGTGCATT+GGG | + | chr5.2:81650433-81650452 | MS.gene81230:CDS | 50.0% |
| AGGCACCACCAGGGTATAGT+GGG | - | chr5.2:81650684-81650703 | None:intergenic | 55.0% | |
| AGGGCCCTTGCCAGTAACAA+TGG | - | chr5.2:81650818-81650837 | None:intergenic | 55.0% | |
| CCAAGTACTTGGGACGGTCA+GGG | - | chr5.2:81650279-81650298 | None:intergenic | 55.0% | |
| CCTGACCGTCCCAAGTACTT+GGG | + | chr5.2:81650277-81650296 | MS.gene81230:CDS | 55.0% | |
| CGGTGAGGCTGTGTGGTTTA+AGG | + | chr5.2:81650498-81650517 | MS.gene81230:CDS | 55.0% | |
| CTAGACCCACTATACCCTGG+TGG | + | chr5.2:81650676-81650695 | MS.gene81230:CDS | 55.0% | |
| GACTATGGATGGGACACAGC+TGG | + | chr5.2:81650349-81650368 | MS.gene81230:CDS | 55.0% | |
| GGAACTCAAGAACGGCCGAT+TGG | + | chr5.2:81650759-81650778 | MS.gene81230:CDS | 55.0% | |
| GGACTAGACCCACTATACCC+TGG | + | chr5.2:81650673-81650692 | MS.gene81230:CDS | 55.0% | |
| GGCTACACAGGTTGTGCTCA+TGG | + | chr5.2:81650606-81650625 | MS.gene81230:CDS | 55.0% | |
| GGGTCATCAGCAAGACCAAG+AGG | - | chr5.2:81650712-81650731 | None:intergenic | 55.0% | |
| GGGTCTAGTCCTTCACCAAG+TGG | - | chr5.2:81650664-81650683 | None:intergenic | 55.0% | |
| GGTGCCCAGATCTTCTCAGA+GGG | + | chr5.2:81650523-81650542 | MS.gene81230:CDS | 55.0% | |
| GTGTCCCATCCATAGTCACC+AGG | - | chr5.2:81650346-81650365 | None:intergenic | 55.0% | |
| TCAGCATTCACCGGCAAGAC+TGG | + | chr5.2:81649826-81649845 | MS.gene81230:CDS | 55.0% | |
| TGGTGCCCAGATCTTCTCAG+AGG | + | chr5.2:81650522-81650541 | MS.gene81230:CDS | 55.0% | |
| ! | AAGGCACCACCAGGGTATAG+TGG | - | chr5.2:81650685-81650704 | None:intergenic | 55.0% |
| ! | GAGGCTGTGTGGTTTAAGGC+TGG | + | chr5.2:81650502-81650521 | MS.gene81230:CDS | 55.0% |
| ! | GCCACCCTCTGAGAAGATCT+GGG | - | chr5.2:81650530-81650549 | None:intergenic | 55.0% |
| !! | AGAGTTGGTGGAGGACCACT+TGG | + | chr5.2:81650646-81650665 | MS.gene81230:CDS | 55.0% |
| !! | CACAGCAGATGGGCTATGCT+TGG | + | chr5.2:81650424-81650443 | MS.gene81230:CDS | 55.0% |
| !! | GAAGGCTACAGAGTTGGTGG+AGG | + | chr5.2:81650637-81650656 | MS.gene81230:CDS | 55.0% |
| ACCCTGTCGCCAACAACGCA+TGG | + | chr5.2:81650866-81650885 | MS.gene81230:CDS | 60.0% | |
| CCCAAGTACTTGGGACGGTC+AGG | - | chr5.2:81650280-81650299 | None:intergenic | 60.0% | |
| CCCATGCGTTGTTGGCGACA+GGG | - | chr5.2:81650870-81650889 | None:intergenic | 60.0% | |
| CCCTGACCGTCCCAAGTACT+TGG | + | chr5.2:81650276-81650295 | MS.gene81230:CDS | 60.0% | |
| CCCTGTCGCCAACAACGCAT+GGG | + | chr5.2:81650867-81650886 | MS.gene81230:CDS | 60.0% | |
| GCCCAGATCTTCTCAGAGGG+TGG | + | chr5.2:81650526-81650545 | MS.gene81230:CDS | 60.0% | |
| GGTGGTGCCTTTGACCCTCT+TGG | + | chr5.2:81650694-81650713 | MS.gene81230:CDS | 60.0% | |
| TGGCGACAGGGTCAGCAACA+TGG | - | chr5.2:81650858-81650877 | None:intergenic | 60.0% | |
| ! | GGCCACCCTCTGAGAAGATC+TGG | - | chr5.2:81650531-81650550 | None:intergenic | 60.0% |
| ! | GGTGGAGGACCACTTGGTGA+AGG | + | chr5.2:81650652-81650671 | MS.gene81230:CDS | 60.0% |
| !! | AGAGGGTCAAAGGCACCACC+AGG | - | chr5.2:81650694-81650713 | None:intergenic | 60.0% |
| !! | GAGGGTCAAAGGCACCACCA+GGG | - | chr5.2:81650693-81650712 | None:intergenic | 60.0% |
| GCCCATGCGTTGTTGGCGAC+AGG | - | chr5.2:81650871-81650890 | None:intergenic | 65.0% | |
| GGGACGGTCAGGGCCATACC+TGG | - | chr5.2:81650269-81650288 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 81649802 | 81650921 | 81649802 | ID=MS.gene81230 |
| chr5.2 | mRNA | 81649802 | 81650921 | 81649802 | ID=MS.gene81230.t1;Parent=MS.gene81230 |
| chr5.2 | exon | 81649802 | 81649947 | 81649802 | ID=MS.gene81230.t1.exon1;Parent=MS.gene81230.t1 |
| chr5.2 | CDS | 81649802 | 81649947 | 81649802 | ID=cds.MS.gene81230.t1;Parent=MS.gene81230.t1 |
| chr5.2 | exon | 81650270 | 81650921 | 81650270 | ID=MS.gene81230.t1.exon2;Parent=MS.gene81230.t1 |
| chr5.2 | CDS | 81650270 | 81650921 | 81650270 | ID=cds.MS.gene81230.t1;Parent=MS.gene81230.t1 |
| Gene Sequence |
| Protein sequence |
