Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92589.t1 | XP_013454903.1 | 96 | 572 | 23 | 0 | 1 | 572 | 1 | 572 | 0.00E+00 | 1156.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92589.t1 | Q9SR40 | 58.1 | 570 | 224 | 6 | 8 | 572 | 8 | 567 | 2.2e-198 | 693.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92589.t1 | A0A072UHQ4 | 96.0 | 572 | 23 | 0 | 1 | 572 | 1 | 572 | 0.0e+00 | 1156.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049181 | MS.gene92589 | 0.80706 | 6.08E-50 | -1.69E-46 |
| MS.gene049232 | MS.gene92589 | -0.802765 | 4.80E-49 | -1.69E-46 |
| MS.gene049259 | MS.gene92589 | 0.848413 | 6.23E-60 | -1.69E-46 |
| MS.gene049483 | MS.gene92589 | 0.838012 | 3.70E-57 | -1.69E-46 |
| MS.gene049634 | MS.gene92589 | 0.821248 | 4.47E-53 | -1.69E-46 |
| MS.gene04986 | MS.gene92589 | 0.828116 | 1.08E-54 | -1.69E-46 |
| MS.gene050082 | MS.gene92589 | 0.816204 | 6.24E-52 | -1.69E-46 |
| MS.gene05015 | MS.gene92589 | 0.804307 | 2.30E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene92589 | -0.808683 | 2.75E-50 | -1.69E-46 |
| MS.gene050173 | MS.gene92589 | 0.859595 | 3.71E-63 | -1.69E-46 |
| MS.gene050216 | MS.gene92589 | -0.846244 | 2.45E-59 | -1.69E-46 |
| MS.gene050333 | MS.gene92589 | -0.816551 | 5.22E-52 | -1.69E-46 |
| MS.gene050381 | MS.gene92589 | 0.873172 | 1.81E-67 | -1.69E-46 |
| MS.gene050504 | MS.gene92589 | -0.818561 | 1.84E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene92589 | -0.826965 | 2.03E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene92589 | -0.803694 | 3.09E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene92589 | -0.803556 | 3.29E-49 | -1.69E-46 |
| MS.gene050883 | MS.gene92589 | 0.822365 | 2.46E-53 | -1.69E-46 |
| MS.gene051044 | MS.gene92589 | 0.822088 | 2.86E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene92589 | 0.827576 | 1.45E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene92589 | 0.839928 | 1.18E-57 | -1.69E-46 |
| MS.gene05114 | MS.gene92589 | 0.801911 | 7.20E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene92589 | 0.822167 | 2.74E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene92589 | 0.829959 | 3.84E-55 | -1.69E-46 |
| MS.gene051367 | MS.gene92589 | 0.821712 | 3.49E-53 | -1.69E-46 |
| MS.gene051946 | MS.gene92589 | 0.816687 | 4.86E-52 | -1.69E-46 |
| MS.gene052089 | MS.gene92589 | 0.827172 | 1.81E-54 | -1.69E-46 |
| MS.gene052560 | MS.gene92589 | 0.821015 | 5.06E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene92589 | 0.847028 | 1.50E-59 | -1.69E-46 |
| MS.gene053488 | MS.gene92589 | 0.808093 | 3.67E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene92589 | 0.87735 | 6.74E-69 | -1.69E-46 |
| MS.gene054054 | MS.gene92589 | 0.809073 | 2.27E-50 | -1.69E-46 |
| MS.gene054056 | MS.gene92589 | 0.859339 | 4.43E-63 | -1.69E-46 |
| MS.gene054057 | MS.gene92589 | 0.806588 | 7.65E-50 | -1.69E-46 |
| MS.gene054616 | MS.gene92589 | 0.851773 | 7.13E-61 | -1.69E-46 |
| MS.gene054708 | MS.gene92589 | 0.824346 | 8.48E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene92589 | -0.801489 | 8.79E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene92589 | 0.829317 | 5.51E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene92589 | 0.849683 | 2.76E-60 | -1.69E-46 |
| MS.gene055202 | MS.gene92589 | 0.841283 | 5.22E-58 | -1.69E-46 |
| MS.gene055634 | MS.gene92589 | -0.813607 | 2.35E-51 | -1.69E-46 |
| MS.gene055776 | MS.gene92589 | -0.806087 | 9.75E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene92589 | 0.843003 | 1.83E-58 | -1.69E-46 |
| MS.gene056185 | MS.gene92589 | 0.824479 | 7.89E-54 | -1.69E-46 |
| MS.gene056311 | MS.gene92589 | 0.847171 | 1.37E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene92589 | -0.81926 | 1.28E-52 | -1.69E-46 |
| MS.gene057014 | MS.gene92589 | 0.834717 | 2.55E-56 | -1.69E-46 |
| MS.gene058068 | MS.gene92589 | 0.814481 | 1.51E-51 | -1.69E-46 |
| MS.gene058099 | MS.gene92589 | 0.823736 | 1.18E-53 | -1.69E-46 |
| MS.gene058109 | MS.gene92589 | 0.804604 | 1.99E-49 | -1.69E-46 |
| MS.gene058111 | MS.gene92589 | 0.812907 | 3.35E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene92589 | 0.845814 | 3.21E-59 | -1.69E-46 |
| MS.gene058173 | MS.gene92589 | 0.834316 | 3.22E-56 | -1.69E-46 |
| MS.gene058175 | MS.gene92589 | 0.845553 | 3.78E-59 | -1.69E-46 |
| MS.gene058268 | MS.gene92589 | 0.814442 | 1.54E-51 | -1.69E-46 |
| MS.gene058269 | MS.gene92589 | 0.81 | 1.43E-50 | -1.69E-46 |
| MS.gene058347 | MS.gene92589 | 0.811149 | 8.09E-51 | -1.69E-46 |
| MS.gene058493 | MS.gene92589 | 0.844316 | 8.15E-59 | -1.69E-46 |
| MS.gene058494 | MS.gene92589 | 0.824403 | 8.23E-54 | -1.69E-46 |
| MS.gene058628 | MS.gene92589 | 0.823592 | 1.27E-53 | -1.69E-46 |
| MS.gene058629 | MS.gene92589 | 0.802795 | 4.73E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene92589 | -0.800395 | 1.47E-48 | -1.69E-46 |
| MS.gene058840 | MS.gene92589 | 0.804221 | 2.40E-49 | -1.69E-46 |
| MS.gene05884 | MS.gene92589 | 0.838202 | 3.31E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene92589 | -0.827853 | 1.24E-54 | -1.69E-46 |
| MS.gene059045 | MS.gene92589 | 0.80157 | 8.46E-49 | -1.69E-46 |
| MS.gene059690 | MS.gene92589 | 0.84477 | 6.16E-59 | -1.69E-46 |
| MS.gene059691 | MS.gene92589 | 0.802632 | 5.12E-49 | -1.69E-46 |
| MS.gene059694 | MS.gene92589 | 0.833118 | 6.41E-56 | -1.69E-46 |
| MS.gene059697 | MS.gene92589 | 0.827642 | 1.40E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene92589 | -0.835747 | 1.40E-56 | -1.69E-46 |
| MS.gene059916 | MS.gene92589 | 0.827693 | 1.36E-54 | -1.69E-46 |
| MS.gene059943 | MS.gene92589 | 0.814137 | 1.80E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene92589 | 0.82149 | 3.93E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene92589 | -0.809945 | 1.47E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene92589 | -0.807475 | 4.96E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92589.t1 | MTR_4g019225 | 95.979 | 572 | 23 | 0 | 1 | 572 | 1 | 572 | 0.0 | 1125 |
| MS.gene92589.t1 | MTR_7g065970 | 62.261 | 575 | 209 | 5 | 1 | 572 | 1 | 570 | 0.0 | 715 |
| MS.gene92589.t1 | MTR_7g065980 | 57.544 | 570 | 228 | 9 | 10 | 572 | 9 | 571 | 0.0 | 684 |
| MS.gene92589.t1 | MTR_5g020620 | 45.760 | 566 | 288 | 5 | 8 | 572 | 14 | 561 | 0.0 | 536 |
| MS.gene92589.t1 | MTR_5g083360 | 47.803 | 569 | 274 | 9 | 14 | 572 | 12 | 567 | 0.0 | 533 |
| MS.gene92589.t1 | MTR_5g073210 | 47.331 | 562 | 280 | 8 | 14 | 572 | 12 | 560 | 0.0 | 525 |
| MS.gene92589.t1 | MTR_5g020600 | 44.326 | 564 | 295 | 6 | 12 | 572 | 19 | 566 | 9.09e-176 | 509 |
| MS.gene92589.t1 | MTR_5g069680 | 44.565 | 552 | 291 | 4 | 21 | 572 | 22 | 558 | 3.53e-173 | 502 |
| MS.gene92589.t1 | MTR_4g015120 | 45.263 | 570 | 293 | 5 | 8 | 572 | 2 | 557 | 1.67e-172 | 500 |
| MS.gene92589.t1 | MTR_3g462760 | 44.102 | 551 | 292 | 4 | 22 | 572 | 22 | 556 | 5.51e-172 | 499 |
| MS.gene92589.t1 | MTR_7g062310 | 45.098 | 561 | 278 | 7 | 27 | 572 | 48 | 593 | 1.00e-171 | 499 |
| MS.gene92589.t1 | MTR_7g062250 | 45.234 | 577 | 295 | 6 | 4 | 572 | 15 | 578 | 1.03e-170 | 496 |
| MS.gene92589.t1 | MTR_7g058690 | 45.299 | 585 | 289 | 10 | 7 | 572 | 8 | 580 | 4.33e-168 | 490 |
| MS.gene92589.t1 | MTR_2g008330 | 42.609 | 575 | 309 | 8 | 5 | 572 | 19 | 579 | 4.77e-167 | 487 |
| MS.gene92589.t1 | MTR_7g458880 | 44.696 | 575 | 286 | 9 | 15 | 572 | 21 | 580 | 4.55e-165 | 482 |
| MS.gene92589.t1 | MTR_5g081810 | 45.438 | 537 | 271 | 6 | 39 | 572 | 12 | 529 | 1.83e-164 | 479 |
| MS.gene92589.t1 | MTR_7g060460 | 44.779 | 565 | 289 | 7 | 21 | 572 | 27 | 581 | 2.10e-164 | 481 |
| MS.gene92589.t1 | MTR_4g064530 | 45.191 | 551 | 281 | 8 | 13 | 555 | 31 | 568 | 2.15e-164 | 481 |
| MS.gene92589.t1 | MTR_3g101635 | 43.494 | 561 | 293 | 8 | 12 | 562 | 10 | 556 | 1.90e-163 | 478 |
| MS.gene92589.t1 | MTR_3g071890 | 48.381 | 525 | 250 | 9 | 12 | 528 | 15 | 526 | 4.89e-163 | 477 |
| MS.gene92589.t1 | MTR_3g101640 | 44.640 | 569 | 295 | 12 | 12 | 572 | 15 | 571 | 1.58e-162 | 475 |
| MS.gene92589.t1 | MTR_4g064530 | 44.361 | 532 | 275 | 8 | 13 | 536 | 31 | 549 | 7.87e-151 | 445 |
| MS.gene92589.t1 | MTR_8g027375 | 40.876 | 548 | 309 | 8 | 28 | 572 | 36 | 571 | 1.08e-149 | 442 |
| MS.gene92589.t1 | MTR_8g091390 | 30.404 | 569 | 312 | 20 | 21 | 551 | 29 | 551 | 1.65e-60 | 211 |
| MS.gene92589.t1 | MTR_5g081790 | 36.861 | 274 | 152 | 5 | 260 | 530 | 165 | 420 | 1.42e-50 | 180 |
| MS.gene92589.t1 | MTR_5g081790 | 46.386 | 166 | 81 | 2 | 12 | 169 | 9 | 174 | 1.46e-39 | 150 |
| MS.gene92589.t1 | MTR_3g078740 | 29.443 | 557 | 342 | 19 | 28 | 550 | 28 | 567 | 1.61e-49 | 181 |
| MS.gene92589.t1 | MTR_3g078700 | 27.957 | 558 | 354 | 14 | 1 | 550 | 1 | 518 | 6.16e-49 | 178 |
| MS.gene92589.t1 | MTR_3g078730 | 26.882 | 558 | 316 | 16 | 23 | 550 | 22 | 517 | 3.07e-41 | 157 |
| MS.gene92589.t1 | MTR_4g101650 | 26.620 | 571 | 371 | 13 | 14 | 572 | 15 | 549 | 1.98e-40 | 155 |
| MS.gene92589.t1 | MTR_8g073840 | 42.857 | 196 | 70 | 6 | 19 | 212 | 23 | 178 | 1.63e-39 | 146 |
| MS.gene92589.t1 | MTR_3g008580 | 25.473 | 581 | 394 | 11 | 1 | 572 | 1 | 551 | 1.95e-39 | 152 |
| MS.gene92589.t1 | MTR_1g090707 | 26.792 | 530 | 352 | 13 | 44 | 572 | 42 | 536 | 5.19e-38 | 148 |
| MS.gene92589.t1 | MTR_4g075690 | 25.599 | 543 | 338 | 18 | 11 | 538 | 7 | 498 | 3.14e-31 | 128 |
| MS.gene92589.t1 | MTR_3g115050 | 25.235 | 531 | 340 | 14 | 49 | 572 | 53 | 533 | 7.71e-31 | 127 |
| MS.gene92589.t1 | MTR_8g479380 | 25.486 | 514 | 319 | 16 | 29 | 532 | 32 | 491 | 2.42e-30 | 125 |
| MS.gene92589.t1 | MTR_8g479390 | 25.532 | 517 | 315 | 15 | 29 | 532 | 34 | 493 | 2.63e-30 | 125 |
| MS.gene92589.t1 | MTR_3g083400 | 24.638 | 552 | 370 | 16 | 8 | 554 | 7 | 517 | 1.85e-29 | 122 |
| MS.gene92589.t1 | MTR_3g083430 | 24.319 | 551 | 373 | 15 | 8 | 554 | 7 | 517 | 2.58e-29 | 122 |
| MS.gene92589.t1 | MTR_3g083440 | 24.457 | 552 | 371 | 16 | 8 | 554 | 7 | 517 | 2.75e-29 | 122 |
| MS.gene92589.t1 | MTR_3g083390 | 24.549 | 554 | 368 | 17 | 8 | 554 | 7 | 517 | 8.04e-29 | 120 |
| MS.gene92589.t1 | MTR_5g018270 | 25.725 | 552 | 349 | 16 | 28 | 572 | 33 | 530 | 1.09e-28 | 120 |
| MS.gene92589.t1 | MTR_4g049390 | 24.457 | 552 | 360 | 17 | 28 | 572 | 29 | 530 | 1.22e-28 | 120 |
| MS.gene92589.t1 | MTR_2g088080 | 25.000 | 552 | 357 | 17 | 28 | 572 | 32 | 533 | 1.61e-28 | 120 |
| MS.gene92589.t1 | MTR_3g083450 | 24.304 | 539 | 364 | 15 | 20 | 554 | 20 | 518 | 4.93e-28 | 118 |
| MS.gene92589.t1 | MTR_4g075690 | 26.069 | 491 | 298 | 17 | 11 | 486 | 7 | 447 | 1.02e-27 | 116 |
| MS.gene92589.t1 | MTR_7g051440 | 25.189 | 528 | 341 | 18 | 19 | 532 | 22 | 509 | 7.10e-27 | 115 |
| MS.gene92589.t1 | MTR_1g026410 | 23.585 | 530 | 350 | 14 | 49 | 572 | 52 | 532 | 8.10e-27 | 115 |
| MS.gene92589.t1 | MTR_4g083210 | 23.188 | 552 | 370 | 15 | 8 | 552 | 7 | 511 | 1.04e-26 | 114 |
| MS.gene92589.t1 | MTR_4g048350 | 24.612 | 516 | 333 | 17 | 28 | 537 | 29 | 494 | 6.33e-25 | 108 |
| MS.gene92589.t1 | MTR_3g083410 | 23.938 | 518 | 348 | 16 | 42 | 554 | 5 | 481 | 2.66e-24 | 107 |
| MS.gene92589.t1 | MTR_4g083190 | 24.612 | 516 | 341 | 16 | 43 | 552 | 44 | 517 | 7.01e-24 | 105 |
| MS.gene92589.t1 | MTR_7g058670 | 53.086 | 81 | 37 | 1 | 83 | 162 | 13 | 93 | 2.81e-22 | 92.0 |
| MS.gene92589.t1 | MTR_4g132320 | 25.051 | 495 | 306 | 13 | 49 | 532 | 54 | 494 | 1.64e-21 | 98.6 |
| MS.gene92589.t1 | MTR_2g088080 | 24.303 | 502 | 323 | 17 | 78 | 572 | 1 | 452 | 7.10e-21 | 96.3 |
| MS.gene92589.t1 | MTR_3g079660 | 39.130 | 69 | 42 | 0 | 482 | 550 | 5 | 73 | 4.92e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92589.t1 | AT3G09220 | 58.409 | 553 | 215 | 7 | 8 | 555 | 8 | 550 | 0.0 | 671 |
| MS.gene92589.t1 | AT5G01050 | 54.690 | 565 | 242 | 5 | 12 | 572 | 14 | 568 | 0.0 | 648 |
| MS.gene92589.t1 | AT5G01040 | 53.217 | 575 | 254 | 8 | 1 | 572 | 4 | 566 | 0.0 | 638 |
| MS.gene92589.t1 | AT3G09220 | 58.225 | 462 | 178 | 6 | 99 | 555 | 2 | 453 | 0.0 | 554 |
| MS.gene92589.t1 | AT5G05390 | 47.719 | 570 | 284 | 6 | 6 | 572 | 7 | 565 | 0.0 | 547 |
| MS.gene92589.t1 | AT2G40370 | 46.967 | 577 | 278 | 9 | 13 | 572 | 15 | 580 | 0.0 | 527 |
| MS.gene92589.t1 | AT5G03260 | 46.491 | 570 | 287 | 5 | 4 | 572 | 5 | 557 | 2.48e-180 | 520 |
| MS.gene92589.t1 | AT2G30210 | 46.367 | 578 | 285 | 8 | 6 | 572 | 7 | 570 | 1.46e-179 | 519 |
| MS.gene92589.t1 | AT5G58910 | 46.561 | 567 | 283 | 6 | 12 | 572 | 15 | 567 | 1.77e-176 | 511 |
| MS.gene92589.t1 | AT5G58910 | 46.737 | 567 | 281 | 7 | 12 | 572 | 15 | 566 | 1.60e-175 | 508 |
| MS.gene92589.t1 | AT2G38080 | 44.406 | 572 | 300 | 6 | 1 | 572 | 5 | 558 | 4.15e-175 | 507 |
| MS.gene92589.t1 | AT5G07130 | 46.875 | 576 | 280 | 11 | 11 | 572 | 6 | 569 | 4.93e-174 | 504 |
| MS.gene92589.t1 | AT2G29130 | 45.629 | 572 | 295 | 6 | 8 | 572 | 11 | 573 | 6.63e-173 | 502 |
| MS.gene92589.t1 | AT5G01190 | 45.374 | 562 | 292 | 4 | 12 | 572 | 11 | 558 | 1.26e-170 | 496 |
| MS.gene92589.t1 | AT5G58910 | 46.753 | 539 | 261 | 6 | 39 | 572 | 6 | 523 | 5.23e-169 | 490 |
| MS.gene92589.t1 | AT5G60020 | 44.097 | 576 | 296 | 6 | 13 | 572 | 12 | 577 | 2.31e-167 | 488 |
| MS.gene92589.t1 | AT5G60020 | 45.290 | 552 | 276 | 6 | 37 | 572 | 4 | 545 | 9.89e-167 | 485 |
| MS.gene92589.t1 | AT5G09360 | 42.984 | 563 | 300 | 9 | 14 | 572 | 24 | 569 | 7.44e-166 | 484 |
| MS.gene92589.t1 | AT5G01190 | 44.840 | 562 | 281 | 5 | 12 | 572 | 11 | 544 | 1.41e-164 | 479 |
| MS.gene92589.t1 | AT1G18140 | 43.137 | 561 | 289 | 9 | 30 | 572 | 33 | 581 | 2.38e-156 | 460 |
| MS.gene92589.t1 | AT2G46570 | 42.806 | 556 | 297 | 9 | 23 | 572 | 29 | 569 | 1.56e-153 | 452 |
| MS.gene92589.t1 | AT5G60020 | 43.446 | 534 | 276 | 6 | 13 | 530 | 12 | 535 | 3.27e-148 | 438 |
| MS.gene92589.t1 | AT5G07130 | 47.262 | 493 | 237 | 10 | 91 | 572 | 4 | 484 | 8.53e-147 | 432 |
| MS.gene92589.t1 | AT5G07130 | 47.262 | 493 | 237 | 10 | 91 | 572 | 4 | 484 | 8.53e-147 | 432 |
| MS.gene92589.t1 | AT5G48100 | 40.429 | 559 | 300 | 12 | 12 | 555 | 6 | 546 | 5.10e-143 | 425 |
| MS.gene92589.t1 | AT2G46570 | 42.685 | 499 | 265 | 9 | 80 | 572 | 1 | 484 | 3.55e-133 | 397 |
| MS.gene92589.t1 | AT5G21100 | 29.217 | 575 | 343 | 16 | 21 | 567 | 19 | 557 | 4.66e-62 | 214 |
| MS.gene92589.t1 | AT4G39830 | 29.088 | 581 | 328 | 19 | 13 | 551 | 23 | 561 | 2.34e-60 | 210 |
| MS.gene92589.t1 | AT5G21105 | 27.768 | 569 | 353 | 13 | 10 | 550 | 20 | 558 | 1.02e-57 | 203 |
| MS.gene92589.t1 | AT5G21105 | 27.140 | 549 | 342 | 13 | 10 | 530 | 20 | 538 | 9.42e-49 | 178 |
| MS.gene92589.t1 | AT4G39830 | 28.543 | 508 | 280 | 18 | 85 | 551 | 1 | 466 | 3.54e-45 | 167 |
| MS.gene92589.t1 | AT4G39830 | 28.628 | 503 | 276 | 18 | 90 | 551 | 4 | 464 | 1.24e-44 | 165 |
| MS.gene92589.t1 | AT4G39830 | 28.008 | 507 | 271 | 17 | 85 | 551 | 1 | 453 | 8.95e-42 | 157 |
| MS.gene92589.t1 | AT4G25240 | 27.051 | 573 | 369 | 16 | 12 | 572 | 15 | 550 | 7.47e-41 | 156 |
| MS.gene92589.t1 | AT4G25240 | 27.051 | 573 | 369 | 16 | 12 | 572 | 15 | 550 | 7.47e-41 | 156 |
| MS.gene92589.t1 | AT5G51480 | 25.569 | 571 | 377 | 14 | 14 | 572 | 16 | 550 | 3.34e-40 | 154 |
| MS.gene92589.t1 | AT4G12420 | 24.764 | 529 | 358 | 14 | 12 | 532 | 11 | 507 | 5.79e-35 | 139 |
| MS.gene92589.t1 | AT4G12420 | 24.764 | 529 | 358 | 14 | 12 | 532 | 11 | 507 | 5.79e-35 | 139 |
| MS.gene92589.t1 | AT1G41830 | 25.391 | 575 | 358 | 17 | 14 | 572 | 12 | 531 | 1.20e-33 | 135 |
| MS.gene92589.t1 | AT1G76160 | 25.130 | 577 | 371 | 18 | 7 | 572 | 4 | 530 | 3.56e-32 | 130 |
| MS.gene92589.t1 | AT1G21860 | 25.376 | 532 | 338 | 17 | 14 | 538 | 17 | 496 | 3.56e-32 | 130 |
| MS.gene92589.t1 | AT4G37160 | 24.525 | 579 | 371 | 15 | 4 | 572 | 12 | 534 | 6.56e-32 | 130 |
| MS.gene92589.t1 | AT5G48450 | 23.836 | 537 | 367 | 15 | 14 | 547 | 17 | 514 | 1.10e-31 | 130 |
| MS.gene92589.t1 | AT5G48450 | 23.836 | 537 | 367 | 15 | 14 | 547 | 17 | 514 | 2.01e-31 | 129 |
| MS.gene92589.t1 | AT1G75790 | 24.564 | 574 | 371 | 19 | 14 | 572 | 15 | 541 | 1.15e-30 | 126 |
| MS.gene92589.t1 | AT1G21850 | 25.151 | 497 | 313 | 16 | 49 | 538 | 52 | 496 | 4.62e-30 | 124 |
| MS.gene92589.t1 | AT2G23630 | 24.954 | 545 | 363 | 13 | 29 | 572 | 38 | 537 | 1.43e-29 | 123 |
| MS.gene92589.t1 | AT2G23630 | 24.954 | 545 | 363 | 13 | 29 | 572 | 33 | 532 | 1.53e-29 | 123 |
| MS.gene92589.t1 | AT5G66920 | 23.835 | 558 | 354 | 14 | 28 | 572 | 39 | 538 | 6.30e-29 | 121 |
| MS.gene92589.t1 | AT1G55560 | 30.612 | 294 | 194 | 5 | 28 | 320 | 28 | 312 | 1.86e-28 | 120 |
| MS.gene92589.t1 | AT3G13400 | 24.366 | 513 | 336 | 13 | 28 | 532 | 29 | 497 | 1.95e-27 | 117 |
| MS.gene92589.t1 | AT3G13400 | 24.366 | 513 | 336 | 13 | 28 | 532 | 29 | 497 | 1.95e-27 | 117 |
| MS.gene92589.t1 | AT5G21105 | 25.656 | 343 | 226 | 5 | 211 | 550 | 51 | 367 | 6.74e-27 | 113 |
| MS.gene92589.t1 | AT4G22010 | 24.767 | 537 | 336 | 17 | 49 | 572 | 49 | 530 | 1.07e-26 | 114 |
| MS.gene92589.t1 | AT4G37160 | 28.349 | 321 | 212 | 5 | 4 | 323 | 12 | 315 | 2.22e-26 | 112 |
| MS.gene92589.t1 | AT1G55570 | 24.105 | 531 | 355 | 12 | 12 | 532 | 8 | 500 | 6.84e-26 | 112 |
| MS.gene92589.t1 | AT3G13390 | 25.245 | 511 | 341 | 15 | 28 | 535 | 30 | 502 | 2.89e-25 | 110 |
| MS.gene92589.t1 | AT4G28090 | 23.600 | 500 | 322 | 16 | 43 | 532 | 45 | 494 | 2.35e-21 | 98.2 |
| MS.gene92589.t1 | AT4G38420 | 28.405 | 257 | 160 | 7 | 37 | 285 | 41 | 281 | 4.28e-18 | 87.8 |
| MS.gene92589.t1 | AT4G38420 | 28.405 | 257 | 160 | 7 | 37 | 285 | 41 | 281 | 8.06e-18 | 87.0 |
| MS.gene92589.t1 | AT4G38420 | 28.405 | 257 | 160 | 7 | 37 | 285 | 41 | 281 | 1.52e-17 | 86.3 |
Find 141 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAACATTATGCAGGTATT+TGG | 0.191251 | 4.2:-82941087 | MS.gene92589:intron |
| GGGCATTGGGTTACATATTC+TGG | 0.208610 | 4.2:+82943962 | None:intergenic |
| AATTCAAATGGTGGTTGATT+TGG | 0.228784 | 4.2:+82941509 | None:intergenic |
| TCATGGTTATCAGGCATAAT+TGG | 0.277334 | 4.2:+82942335 | None:intergenic |
| TGGGTTTAACTTTCATGTTT+TGG | 0.277831 | 4.2:-82941324 | MS.gene92589:CDS |
| GAACACATGTTCATAACTTT+TGG | 0.285867 | 4.2:-82941701 | MS.gene92589:CDS |
| GTCTTCACCTTAGTTGATTT+AGG | 0.296358 | 4.2:+82941428 | None:intergenic |
| TCAACAATTAATGGCTTATC+TGG | 0.303948 | 4.2:-82943316 | MS.gene92589:CDS |
| ACCTACCAATTTAACCTAAC+TGG | 0.312872 | 4.2:-82943917 | MS.gene92589:CDS |
| CTTGTCCAGTTAGGTTAAAT+TGG | 0.320988 | 4.2:+82943912 | None:intergenic |
| AAAAGCAATACCAAGCAATA+TGG | 0.325084 | 4.2:+82943769 | None:intergenic |
| TCAAATGCATCAACAATTAA+TGG | 0.327150 | 4.2:-82943325 | MS.gene92589:CDS |
| GGGACTTCTTGATAAACCTT+TGG | 0.333644 | 4.2:+82943791 | None:intergenic |
| TCAGGCATAATTGGCATTAT+AGG | 0.339643 | 4.2:+82942344 | None:intergenic |
| CCTACAATCTTACTCTTCAT+TGG | 0.348502 | 4.2:-82945214 | MS.gene92589:intron |
| TCCTCTAGTGGTTATGTTAG+TGG | 0.350570 | 4.2:+82942403 | None:intergenic |
| AATCATCCTATTCATATTCA+TGG | 0.354176 | 4.2:-82941344 | MS.gene92589:CDS |
| CACCAGATGGTATTGGGCAT+TGG | 0.364496 | 4.2:+82943948 | None:intergenic |
| AGCTGCCACCAGATGGTATT+GGG | 0.364532 | 4.2:+82943942 | None:intergenic |
| CTACAAAATACAGCTATTCT+TGG | 0.369525 | 4.2:-82941374 | MS.gene92589:CDS |
| TAATTATACTGACCCTTCAT+TGG | 0.373770 | 4.2:-82941486 | MS.gene92589:CDS |
| TTGGCTTGTACATTGTCATT+TGG | 0.376918 | 4.2:-82941068 | MS.gene92589:CDS |
| GCAAATGCAAGTGGCTTAGA+AGG | 0.379879 | 4.2:+82941452 | None:intergenic |
| CCCTCTCGAGCATTAATTGT+TGG | 0.386584 | 4.2:+82945272 | None:intergenic |
| GTTGGTGTATCATGGTTATC+AGG | 0.392956 | 4.2:+82942326 | None:intergenic |
| GACGTTGTGGTGCTTGCGCC+TGG | 0.400282 | 4.2:-82942515 | MS.gene92589:CDS |
| AAAGCAATACCAAGCAATAT+GGG | 0.402642 | 4.2:+82943770 | None:intergenic |
| ACCAGATGGTATTGGGCATT+GGG | 0.403258 | 4.2:+82943949 | None:intergenic |
| TCATCTACTTTACGTGGAAC+TGG | 0.407962 | 4.2:+82941722 | None:intergenic |
| TACAAAATACAGCTATTCTT+GGG | 0.408559 | 4.2:-82941373 | MS.gene92589:CDS |
| TAGCTACAACTGTGAAACTA+TGG | 0.411298 | 4.2:+82942570 | None:intergenic |
| TCCTCCCACTGGCACAGAAA+TGG | 0.414706 | 4.2:+82941226 | None:intergenic |
| ATTTGCTTCTGCTGCTATTG+TGG | 0.415650 | 4.2:-82946102 | MS.gene92589:CDS |
| TCCTGGTAAGGTTCCATTGA+CGG | 0.426598 | 4.2:+82945295 | None:intergenic |
| GTGTACCCTCTTGTCCAGTT+AGG | 0.427115 | 4.2:+82943903 | None:intergenic |
| TTTCTGTGCCAGTGGGAGGA+TGG | 0.429026 | 4.2:-82941223 | MS.gene92589:CDS |
| TTAAACCCATGAATATGAAT+AGG | 0.429980 | 4.2:+82941338 | None:intergenic |
| TAATTGAAGACTTACGATCT+TGG | 0.430243 | 4.2:+82943275 | None:intergenic |
| GGACTTCTTGATAAACCTTT+GGG | 0.434862 | 4.2:+82943792 | None:intergenic |
| GTTGAGAATGGGCCTACTCT+TGG | 0.437907 | 4.2:-82941007 | MS.gene92589:CDS |
| CTAGTCGTGGCTTAATGATA+AGG | 0.437923 | 4.2:+82943831 | None:intergenic |
| AATTGAAGACTTACGATCTT+GGG | 0.440588 | 4.2:+82943276 | None:intergenic |
| TTCCTACGTGCTACTGTCCA+TGG | 0.442379 | 4.2:-82943857 | MS.gene92589:CDS |
| TTTGCTCTTCCTAGGGGTAG+AGG | 0.443734 | 4.2:-82941590 | MS.gene92589:CDS |
| CCAATGAAGAGTAAGATTGT+AGG | 0.448345 | 4.2:+82945214 | None:intergenic |
| GAAGCTAATAGAAGAGCAAA+AGG | 0.450795 | 4.2:+82946128 | None:intergenic |
| TTCTGTGCCAGTGGGAGGAT+GGG | 0.454325 | 4.2:-82941222 | MS.gene92589:CDS |
| CAACACTTGGGAAGATTAGC+TGG | 0.455119 | 4.2:+82940965 | None:intergenic |
| CAGGTTATCACTGCCGTCAA+TGG | 0.458437 | 4.2:-82945308 | MS.gene92589:CDS |
| ATATATACAGGTTTAACAAC+TGG | 0.461888 | 4.2:-82941758 | MS.gene92589:intron |
| TTTAACAACTGGTCCACATT+GGG | 0.462574 | 4.2:-82941747 | MS.gene92589:CDS |
| ATTGATAATGCGTAGTAAGT+AGG | 0.465795 | 4.2:+82942631 | None:intergenic |
| AGAGGAGTTGTTGTTTATGA+TGG | 0.466459 | 4.2:-82942386 | MS.gene92589:CDS |
| TTATATCATACCTGTAACAT+TGG | 0.468461 | 4.2:+82942286 | None:intergenic |
| ATTTGCACCTAAATCAACTA+AGG | 0.469161 | 4.2:-82941435 | MS.gene92589:CDS |
| TAGCTGCCACCAGATGGTAT+TGG | 0.469636 | 4.2:+82943941 | None:intergenic |
| TCAGTATAATTAAATTCAAA+TGG | 0.470555 | 4.2:+82941497 | None:intergenic |
| CTTGATAAACCTTTGGGAAG+GGG | 0.471972 | 4.2:+82943798 | None:intergenic |
| GCCGTCAATGGAACCTTACC+AGG | 0.472419 | 4.2:-82945296 | MS.gene92589:CDS |
| AGTTGTTGATTCTTATTACA+TGG | 0.475969 | 4.2:-82942459 | MS.gene92589:CDS |
| GGATTAACAAAGTTAAACTT+TGG | 0.476313 | 4.2:+82941263 | None:intergenic |
| GAAATGGTGTTACGCATTTG+AGG | 0.480620 | 4.2:+82941242 | None:intergenic |
| TGAGAGAAATGCAACAGATA+CGG | 0.485761 | 4.2:-82943365 | MS.gene92589:CDS |
| ATCATCCTATTCATATTCAT+GGG | 0.488322 | 4.2:-82941343 | MS.gene92589:CDS |
| ATTAATTGTTGGTCCTGGTA+AGG | 0.491356 | 4.2:+82945283 | None:intergenic |
| TAAATAATGTACTCAACACT+TGG | 0.491896 | 4.2:+82940952 | None:intergenic |
| CGAGCATTAATTGTTGGTCC+TGG | 0.493195 | 4.2:+82945278 | None:intergenic |
| GAGAGAAATGCAACAGATAC+GGG | 0.494209 | 4.2:-82943364 | MS.gene92589:CDS |
| TCAGCGATTGTGCCGTCCAC+AGG | 0.494835 | 4.2:-82945327 | MS.gene92589:CDS |
| GGGTAGAGGTTTCTCAATGT+TGG | 0.495591 | 4.2:-82941576 | MS.gene92589:CDS |
| CAAGAAGTCCCCATATTGCT+TGG | 0.500129 | 4.2:-82943779 | MS.gene92589:intron |
| ATTTGGAAACACACTTGCCA+TGG | 0.502328 | 4.2:-82941051 | MS.gene92589:CDS |
| TAGTTTCACAGTTGTAGCTA+TGG | 0.504059 | 4.2:-82942567 | MS.gene92589:CDS |
| TGTGAGCTGTTGGTGTATCA+TGG | 0.504650 | 4.2:+82942318 | None:intergenic |
| TTTGGAAACACACTTGCCAT+GGG | 0.506002 | 4.2:-82941050 | MS.gene92589:CDS |
| GGATCAACATTAGCCAATGA+AGG | 0.506492 | 4.2:+82941473 | None:intergenic |
| ACAACACAACGACCTGGTCC+TGG | 0.509215 | 4.2:+82941653 | None:intergenic |
| TTCTTGATAAACCTTTGGGA+AGG | 0.519043 | 4.2:+82943796 | None:intergenic |
| AAAAGATTCATTGTTCATGT+TGG | 0.521543 | 4.2:+82941610 | None:intergenic |
| GGAAGATTAGCTGGTGGAGG+AGG | 0.523061 | 4.2:+82940974 | None:intergenic |
| CAATGAAGAGTAAGATTGTA+GGG | 0.523403 | 4.2:+82945215 | None:intergenic |
| AGATTTCAAGCAAATAATCC+AGG | 0.524094 | 4.2:-82941191 | MS.gene92589:intron |
| ATTAAATTGCAGGGGAGTGG+TGG | 0.524387 | 4.2:-82943408 | MS.gene92589:intron |
| ACCCAATGCCCAATACCATC+TGG | 0.526254 | 4.2:-82943950 | MS.gene92589:CDS |
| TAGTCGTGGCTTAATGATAA+GGG | 0.527616 | 4.2:+82943832 | None:intergenic |
| AAACTTTGGTTCATCTCTAG+TGG | 0.533014 | 4.2:+82941277 | None:intergenic |
| CTTATCATTAAGCCACGACT+AGG | 0.535485 | 4.2:-82943830 | MS.gene92589:CDS |
| TCTTGATAAACCTTTGGGAA+GGG | 0.536055 | 4.2:+82943797 | None:intergenic |
| ACCAACAATTAATGCTCGAG+AGG | 0.542459 | 4.2:-82945273 | MS.gene92589:CDS |
| CCATACCGTTCTTCAAGTGT+TGG | 0.544154 | 4.2:-82942428 | MS.gene92589:CDS |
| ATAATTAAATTGCAGGGGAG+TGG | 0.546443 | 4.2:-82943411 | MS.gene92589:intron |
| TCCAGTTAGGTTAAATTGGT+AGG | 0.550019 | 4.2:+82943916 | None:intergenic |
| GTTTAACAACTGGTCCACAT+TGG | 0.554162 | 4.2:-82941748 | MS.gene92589:CDS |
| GTTGATGCATTTGACTCCGC+TGG | 0.558250 | 4.2:+82943334 | None:intergenic |
| CTAGAGCAATGCATCAATCC+AGG | 0.561417 | 4.2:-82941671 | MS.gene92589:CDS |
| GATGCATTTGACTCCGCTGG+TGG | 0.562919 | 4.2:+82943337 | None:intergenic |
| GACAAGAGGGTACACTTTGG+TGG | 0.569591 | 4.2:-82943895 | MS.gene92589:CDS |
| ATTTAACCTAACTGGACAAG+AGG | 0.571063 | 4.2:-82943909 | MS.gene92589:CDS |
| CAATGCATCAATCCAGGACC+AGG | 0.571950 | 4.2:-82941665 | MS.gene92589:CDS |
| AGAACGTCAACGGTTTGACC+AGG | 0.576105 | 4.2:+82942497 | None:intergenic |
| CGTGGAACTGGAACCCAATG+TGG | 0.578205 | 4.2:+82941734 | None:intergenic |
| GTATAATTAAATTCAAATGG+TGG | 0.578940 | 4.2:+82941500 | None:intergenic |
| ACCATTTCTGTGCCAGTGGG+AGG | 0.579775 | 4.2:-82941227 | MS.gene92589:CDS |
| ACACTATAACACTGACGTTG+TGG | 0.581153 | 4.2:-82942528 | MS.gene92589:CDS |
| TTGGGAAGATTAGCTGGTGG+AGG | 0.584706 | 4.2:+82940971 | None:intergenic |
| GATTTAGGTGCAAATGCAAG+TGG | 0.589023 | 4.2:+82941443 | None:intergenic |
| ATAACAGCCCATCCTCCCAC+TGG | 0.590871 | 4.2:+82941215 | None:intergenic |
| TACAAGCTCAAAGTGAAGCA+AGG | 0.595483 | 4.2:-82942659 | MS.gene92589:CDS |
| CTGGACAAGAGGGTACACTT+TGG | 0.595930 | 4.2:-82943898 | MS.gene92589:CDS |
| TGTAATAAGAATCAACAACT+TGG | 0.597362 | 4.2:+82942462 | None:intergenic |
| ATGTGTTCATCTACTTTACG+TGG | 0.597501 | 4.2:+82941716 | None:intergenic |
| GTGTAAAACTTGTGAGCTGT+TGG | 0.601475 | 4.2:+82942308 | None:intergenic |
| ATGCATTTGACTCCGCTGGT+GGG | 0.601923 | 4.2:+82943338 | None:intergenic |
| TAACACCATTTCTGTGCCAG+TGG | 0.602566 | 4.2:-82941231 | MS.gene92589:CDS |
| ATAAACAACAACTCCTCTAG+TGG | 0.606065 | 4.2:+82942391 | None:intergenic |
| TAGGTATAGCTGCCACCAGA+TGG | 0.606138 | 4.2:+82943935 | None:intergenic |
| GGCACTGTTGTTCCAAGAGT+AGG | 0.606785 | 4.2:+82940995 | None:intergenic |
| CCAACACTTGAAGAACGGTA+TGG | 0.608437 | 4.2:+82942428 | None:intergenic |
| AAATAATGTACTCAACACTT+GGG | 0.616786 | 4.2:+82940953 | None:intergenic |
| ATTGAGAAACCTCTACCCCT+AGG | 0.617029 | 4.2:+82941581 | None:intergenic |
| TGGTTCCAACACTTGAAGAA+CGG | 0.619947 | 4.2:+82942423 | None:intergenic |
| TGGAAACACACTTGCCATGG+GGG | 0.620681 | 4.2:-82941048 | MS.gene92589:CDS |
| ACCACTAACATAACCACTAG+AGG | 0.625523 | 4.2:-82942404 | MS.gene92589:CDS |
| TTTAACCTAACTGGACAAGA+GGG | 0.625977 | 4.2:-82943908 | MS.gene92589:CDS |
| TCGCTCATACCCCTTCCCAA+AGG | 0.634666 | 4.2:-82943807 | MS.gene92589:CDS |
| AAGCAATACCAAGCAATATG+GGG | 0.636098 | 4.2:+82943771 | None:intergenic |
| ACAAAATACAGCTATTCTTG+GGG | 0.644652 | 4.2:-82941372 | MS.gene92589:CDS |
| GATCAACATTAGCCAATGAA+GGG | 0.645575 | 4.2:+82941474 | None:intergenic |
| CGGCAGTGATAACCTGTGGA+CGG | 0.647467 | 4.2:+82945315 | None:intergenic |
| TTGGAAACACACTTGCCATG+GGG | 0.647612 | 4.2:-82941049 | MS.gene92589:CDS |
| AACACCATTTCTGTGCCAGT+GGG | 0.650163 | 4.2:-82941230 | MS.gene92589:CDS |
| GGGTATGAGCGACCTAGTCG+TGG | 0.653043 | 4.2:+82943818 | None:intergenic |
| TTGACGGCAGTGATAACCTG+TGG | 0.667579 | 4.2:+82945311 | None:intergenic |
| CCAACAATTAATGCTCGAGA+GGG | 0.669858 | 4.2:-82945272 | MS.gene92589:CDS |
| CACTTGGGAAGATTAGCTGG+TGG | 0.669877 | 4.2:+82940968 | None:intergenic |
| CAATGCCCAATACCATCTGG+TGG | 0.674666 | 4.2:-82943947 | MS.gene92589:CDS |
| GCTTAATGATAAGGGCACCA+TGG | 0.676516 | 4.2:+82943840 | None:intergenic |
| TTTAGTACAACACAACGACC+TGG | 0.677465 | 4.2:+82941647 | None:intergenic |
| TATTCTGGACCATCTGACCA+AGG | 0.704441 | 4.2:+82943977 | None:intergenic |
| AGATACGGGTAACCCACCAG+CGG | 0.756602 | 4.2:-82943350 | MS.gene92589:CDS |
| CACCATGGACAGTAGCACGT+AGG | 0.762654 | 4.2:+82943855 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATGAATTCTTATAATT+TGG | + | chr4.2:82943413-82943432 | None:intergenic | 10.0% |
| !! | ATATATAATAAGATAAACAA+AGG | - | chr4.2:82942855-82942874 | MS.gene92589:intron | 10.0% |
| !!! | AAAAGTTTTAAGTAAAATAA+AGG | + | chr4.2:82941139-82941158 | None:intergenic | 10.0% |
| !!! | AATTGTTTAGAATAATTTTT+TGG | + | chr4.2:82943677-82943696 | None:intergenic | 10.0% |
| !!! | ACTATTTTTTTTTTATTGAA+AGG | + | chr4.2:82943025-82943044 | None:intergenic | 10.0% |
| !!! | ATTTAATTTATATGTACTTT+CGG | - | chr4.2:82944929-82944948 | MS.gene92589:intron | 10.0% |
| !!! | CTATTTTTTTTTTATTGAAA+GGG | + | chr4.2:82943024-82943043 | None:intergenic | 10.0% |
| !!! | TTTTAAATGTAATTCTAATT+TGG | - | chr4.2:82943077-82943096 | MS.gene92589:intron | 10.0% |
| !! | ATATATCATAATTAAATTGC+AGG | - | chr4.2:82943704-82943723 | MS.gene92589:intron | 15.0% |
| !! | TAAATTTCCATATATTCTAA+AGG | + | chr4.2:82941100-82941119 | None:intergenic | 15.0% |
| !! | TATAACTAGATTGAAATAAA+AGG | - | chr4.2:82941349-82941368 | MS.gene92589:CDS | 15.0% |
| !! | TATATCATAATTAAATTGCA+GGG | - | chr4.2:82943705-82943724 | MS.gene92589:intron | 15.0% |
| !! | TCAGTATAATTAAATTCAAA+TGG | + | chr4.2:82945628-82945647 | None:intergenic | 15.0% |
| !! | TCATATCTTAAAATATAGTT+TGG | + | chr4.2:82944308-82944327 | None:intergenic | 15.0% |
| !! | TGTTACTAAACTTTATAATA+TGG | - | chr4.2:82941708-82941727 | MS.gene92589:CDS | 15.0% |
| !! | TTCAATGATCATAAATATAT+TGG | - | chr4.2:82945118-82945137 | MS.gene92589:intron | 15.0% |
| !! | TTCAATTAGTTAACAAATTT+GGG | - | chr4.2:82943862-82943881 | MS.gene92589:CDS | 15.0% |
| !!! | AATCAATTTTATCATAAAAG+AGG | - | chr4.2:82942641-82942660 | MS.gene92589:CDS | 15.0% |
| !!! | ATCAATTTTATCATAAAAGA+GGG | - | chr4.2:82942642-82942661 | MS.gene92589:CDS | 15.0% |
| !!! | ATTTTTTACATAGTTGTTTT+TGG | + | chr4.2:82942424-82942443 | None:intergenic | 15.0% |
| !!! | CTTTAGAATATTCTTAAAAT+AGG | + | chr4.2:82942524-82942543 | None:intergenic | 15.0% |
| !!! | GAAATTTTGTATATATATAC+AGG | - | chr4.2:82945352-82945371 | MS.gene92589:intron | 15.0% |
| !!! | TTAATTTTATTTTGATATCC+AGG | - | chr4.2:82941756-82941775 | MS.gene92589:intron | 15.0% |
| !!! | TTACATGATCATTATTTTAA+CGG | - | chr4.2:82942113-82942132 | MS.gene92589:intron | 15.0% |
| !!! | TTATTTTTCTCATATGTATA+GGG | - | chr4.2:82943046-82943065 | MS.gene92589:intron | 15.0% |
| !!! | TTCTCTAATATTTTTATTGA+GGG | + | chr4.2:82941953-82941972 | None:intergenic | 15.0% |
| !!! | TTTCTCTAATATTTTTATTG+AGG | + | chr4.2:82941954-82941973 | None:intergenic | 15.0% |
| !! | AAATTCAATTATCTTTGGTA+AGG | + | chr4.2:82944241-82944260 | None:intergenic | 20.0% |
| !! | AAGAAAAGATTAAAACAAGT+TGG | + | chr4.2:82941584-82941603 | None:intergenic | 20.0% |
| !! | ATACTATTGTTAAAATGAGA+TGG | + | chr4.2:82942992-82943011 | None:intergenic | 20.0% |
| !! | ATATCATAATTAAATTGCAG+GGG | - | chr4.2:82943706-82943725 | MS.gene92589:intron | 20.0% |
| !! | CACCTAATTATTATCAAATT+CGG | - | chr4.2:82944984-82945003 | MS.gene92589:intron | 20.0% |
| !! | CATGTAAAAGTTAAGAAATT+TGG | + | chr4.2:82943984-82944003 | None:intergenic | 20.0% |
| !! | CTAGTTATAAAGATTTACTA+TGG | + | chr4.2:82941338-82941357 | None:intergenic | 20.0% |
| !! | CTTCAATTAGTTAACAAATT+TGG | - | chr4.2:82943861-82943880 | MS.gene92589:CDS | 20.0% |
| !! | GAAATAAATTAAACAAACCA+TGG | - | chr4.2:82941970-82941989 | MS.gene92589:intron | 20.0% |
| !! | GGCATTAAAAATATCTAAAT+GGG | - | chr4.2:82945286-82945305 | MS.gene92589:CDS | 20.0% |
| !! | GTATAATTAAATTCAAATGG+TGG | + | chr4.2:82945625-82945644 | None:intergenic | 20.0% |
| !! | TAAGAAATTTGGATAAAGAT+TGG | + | chr4.2:82943973-82943992 | None:intergenic | 20.0% |
| !! | TACTCTATAGTGAAAATATT+TGG | - | chr4.2:82945265-82945284 | MS.gene92589:CDS | 20.0% |
| !! | TGGCATTAAAAATATCTAAA+TGG | - | chr4.2:82945285-82945304 | MS.gene92589:CDS | 20.0% |
| !! | TTACAGGTATGATATAAATA+GGG | - | chr4.2:82944842-82944861 | MS.gene92589:intron | 20.0% |
| !!! | AATACTTTCAATCACTTTTT+AGG | + | chr4.2:82942699-82942718 | None:intergenic | 20.0% |
| !!! | AATGGGTATATCTTTTTTTT+AGG | - | chr4.2:82945303-82945322 | MS.gene92589:CDS | 20.0% |
| !!! | ATCAATTTTTTGACGAATTA+TGG | + | chr4.2:82942826-82942845 | None:intergenic | 20.0% |
| !!! | ATCCGAATTTGATAATAATT+AGG | + | chr4.2:82944989-82945008 | None:intergenic | 20.0% |
| !!! | ATCTGAAATTCAATTATCTT+TGG | + | chr4.2:82944246-82944265 | None:intergenic | 20.0% |
| !!! | ATTTCTTCCTTTAGAATATA+TGG | - | chr4.2:82941090-82941109 | MS.gene92589:intron | 20.0% |
| !!! | GTTATTTTTCTCATATGTAT+AGG | - | chr4.2:82943045-82943064 | MS.gene92589:intron | 20.0% |
| !!! | TAAGAATTCATATTTTTCTG+TGG | - | chr4.2:82943418-82943437 | MS.gene92589:intron | 20.0% |
| !!! | TAATATTTTTATTGAGGGTA+AGG | + | chr4.2:82941948-82941967 | None:intergenic | 20.0% |
| !!! | TCATGATTGTTTTTACATTT+TGG | - | chr4.2:82944418-82944437 | MS.gene92589:intron | 20.0% |
| !!! | TCTATTTTAGTAGATGAAAT+TGG | - | chr4.2:82943901-82943920 | MS.gene92589:CDS | 20.0% |
| !!! | TTTCTTTTCCATTTTTTTAG+AGG | - | chr4.2:82942297-82942316 | MS.gene92589:CDS | 20.0% |
| ! | AAAAACAATCATGAGTCATA+TGG | + | chr4.2:82944412-82944431 | None:intergenic | 25.0% |
| ! | AAAACAATCATGAGTCATAT+GGG | + | chr4.2:82944411-82944430 | None:intergenic | 25.0% |
| ! | AAAAGATTCATTGTTCATGT+TGG | + | chr4.2:82945515-82945534 | None:intergenic | 25.0% |
| ! | AAATACAAGAAACGTTTAAC+AGG | + | chr4.2:82942035-82942054 | None:intergenic | 25.0% |
| ! | AATCATCCTATTCATATTCA+TGG | - | chr4.2:82945778-82945797 | MS.gene92589:intron | 25.0% |
| ! | ACTTTCAATGTATTGTTGAT+GGG | - | chr4.2:82941048-82941067 | MS.gene92589:CDS | 25.0% |
| ! | AGAAATGAATTCAAATGTCA+TGG | + | chr4.2:82943623-82943642 | None:intergenic | 25.0% |
| ! | ATAAAGGAAGAAAGCTATAT+AGG | + | chr4.2:82941123-82941142 | None:intergenic | 25.0% |
| ! | ATATATACAGGTTTAACAAC+TGG | - | chr4.2:82945364-82945383 | MS.gene92589:intron | 25.0% |
| ! | ATCATCCTATTCATATTCAT+GGG | - | chr4.2:82945779-82945798 | MS.gene92589:intron | 25.0% |
| ! | ATGATCCACATGAAAAAATA+GGG | - | chr4.2:82941232-82941251 | MS.gene92589:CDS | 25.0% |
| ! | CATTTACTAATTGCAAGATT+CGG | - | chr4.2:82945015-82945034 | MS.gene92589:intron | 25.0% |
| ! | CTATCAAACGTCAATAAATA+TGG | - | chr4.2:82943583-82943602 | MS.gene92589:intron | 25.0% |
| ! | GGATTAACAAAGTTAAACTT+TGG | + | chr4.2:82945862-82945881 | None:intergenic | 25.0% |
| ! | GGTTACATTATAAAATATGC+AGG | - | chr4.2:82943098-82943117 | MS.gene92589:intron | 25.0% |
| ! | GTTACAGGTATGATATAAAT+AGG | - | chr4.2:82944841-82944860 | MS.gene92589:intron | 25.0% |
| ! | TAATTCTTGAATTCAAACCA+TGG | + | chr4.2:82941990-82942009 | None:intergenic | 25.0% |
| ! | TACAAAATACAGCTATTCTT+GGG | - | chr4.2:82945749-82945768 | MS.gene92589:intron | 25.0% |
| ! | TACTTTCAATGTATTGTTGA+TGG | - | chr4.2:82941047-82941066 | MS.gene92589:CDS | 25.0% |
| ! | TATGATCCACATGAAAAAAT+AGG | - | chr4.2:82941231-82941250 | MS.gene92589:CDS | 25.0% |
| ! | TCAAATGCATCAACAATTAA+TGG | - | chr4.2:82943797-82943816 | MS.gene92589:CDS | 25.0% |
| ! | TCTAAAAAAGCTCAAACTTA+AGG | + | chr4.2:82941667-82941686 | None:intergenic | 25.0% |
| ! | TGTAATAAGAATCAACAACT+TGG | + | chr4.2:82944663-82944682 | None:intergenic | 25.0% |
| ! | TGTGCATATATAATCAACTT+TGG | - | chr4.2:82944899-82944918 | MS.gene92589:intron | 25.0% |
| ! | TTAAACCCATGAATATGAAT+AGG | + | chr4.2:82945787-82945806 | None:intergenic | 25.0% |
| ! | TTATATCATACCTGTAACAT+TGG | + | chr4.2:82944839-82944858 | None:intergenic | 25.0% |
| ! | TTTAAAAACATATGAGACTC+CGG | - | chr4.2:82942717-82942736 | MS.gene92589:intron | 25.0% |
| !! | ATGTTCATAACTTTTGGTAT+TGG | - | chr4.2:82945427-82945446 | MS.gene92589:intron | 25.0% |
| !! | ATTTTATGTTTTCTCTAGCA+TGG | - | chr4.2:82940971-82940990 | MS.gene92589:CDS | 25.0% |
| !! | CAATCTATTTTCTTTTGCAA+AGG | + | chr4.2:82941509-82941528 | None:intergenic | 25.0% |
| !! | GCATTTTACAACAATATTAG+TGG | - | chr4.2:82945571-82945590 | MS.gene92589:intron | 25.0% |
| !!! | AGTTGTTGATTCTTATTACA+TGG | - | chr4.2:82944663-82944682 | MS.gene92589:intron | 25.0% |
| !!! | TCATTCAATTTTTAACTCCT+TGG | - | chr4.2:82943128-82943147 | MS.gene92589:intron | 25.0% |
| AAAAGCAATACCAAGCAATA+TGG | + | chr4.2:82943356-82943375 | None:intergenic | 30.0% | |
| AAAGCAATACCAAGCAATAT+GGG | + | chr4.2:82943355-82943374 | None:intergenic | 30.0% | |
| AAAGCTCAAACTTAAGGTAA+TGG | + | chr4.2:82941661-82941680 | None:intergenic | 30.0% | |
| AAGTGAATAAGTGGAGAATA+AGG | - | chr4.2:82944117-82944136 | MS.gene92589:intron | 30.0% | |
| AATTCAAATGGTGGTTGATT+TGG | + | chr4.2:82945616-82945635 | None:intergenic | 30.0% | |
| AATTGAAGACTTACGATCTT+GGG | + | chr4.2:82943849-82943868 | None:intergenic | 30.0% | |
| ACAAAATACAGCTATTCTTG+GGG | - | chr4.2:82945750-82945769 | MS.gene92589:intron | 30.0% | |
| ACATGTAAATAAAACCAACC+TGG | + | chr4.2:82945952-82945971 | None:intergenic | 30.0% | |
| AGAAATGAGAGATGTAGAAA+AGG | + | chr4.2:82941076-82941095 | None:intergenic | 30.0% | |
| AGATTTCAAGCAAATAATCC+AGG | - | chr4.2:82945931-82945950 | MS.gene92589:intron | 30.0% | |
| AGTGAATAAGTGGAGAATAA+GGG | - | chr4.2:82944118-82944137 | MS.gene92589:intron | 30.0% | |
| ATTTGCACCTAAATCAACTA+AGG | - | chr4.2:82945687-82945706 | MS.gene92589:intron | 30.0% | |
| CAATGAAGAGTAAGATTGTA+GGG | + | chr4.2:82941910-82941929 | None:intergenic | 30.0% | |
| CATTATAAAATATGCAGGCA+TGG | - | chr4.2:82943103-82943122 | MS.gene92589:intron | 30.0% | |
| CTACAAAATACAGCTATTCT+TGG | - | chr4.2:82945748-82945767 | MS.gene92589:intron | 30.0% | |
| TAATTATACTGACCCTTCAT+TGG | - | chr4.2:82945636-82945655 | MS.gene92589:intron | 30.0% | |
| TAATTGAAGACTTACGATCT+TGG | + | chr4.2:82943850-82943869 | None:intergenic | 30.0% | |
| TCAACAATTAATGGCTTATC+TGG | - | chr4.2:82943806-82943825 | MS.gene92589:CDS | 30.0% | |
| TCAACATTATACTACATGCA+TGG | + | chr4.2:82942077-82942096 | None:intergenic | 30.0% | |
| TCTCCACTTATTCACTTAAA+GGG | + | chr4.2:82944114-82944133 | None:intergenic | 30.0% | |
| TGAAACATTATGCAGGTATT+TGG | - | chr4.2:82946035-82946054 | MS.gene92589:intron | 30.0% | |
| TGATATAAATAGGGTTTCAC+TGG | - | chr4.2:82944851-82944870 | MS.gene92589:intron | 30.0% | |
| TGTATAGTCCTTATGTAAGA+AGG | - | chr4.2:82941178-82941197 | MS.gene92589:intron | 30.0% | |
| TTAAAAACATATGAGACTCC+GGG | - | chr4.2:82942718-82942737 | MS.gene92589:intron | 30.0% | |
| TTCAATTATCTTTGGTAAGG+AGG | + | chr4.2:82944238-82944257 | None:intergenic | 30.0% | |
| TTCTACTTGAAACATTATGC+AGG | - | chr4.2:82946028-82946047 | MS.gene92589:intron | 30.0% | |
| TTCTCCACTTATTCACTTAA+AGG | + | chr4.2:82944115-82944134 | None:intergenic | 30.0% | |
| ! | AAGTTTTACACCAATGTTAC+AGG | - | chr4.2:82944826-82944845 | MS.gene92589:intron | 30.0% |
| ! | AGCAAGATCCTCTAAAAAAA+TGG | + | chr4.2:82942308-82942327 | None:intergenic | 30.0% |
| ! | AGCAATATCTTCTTGTTTCT+AGG | + | chr4.2:82942238-82942257 | None:intergenic | 30.0% |
| ! | CTTTCGGTGTAAATTAACTT+TGG | - | chr4.2:82944945-82944964 | MS.gene92589:intron | 30.0% |
| ! | GAACACATGTTCATAACTTT+TGG | - | chr4.2:82945421-82945440 | MS.gene92589:intron | 30.0% |
| ! | GCTAAATTTTCTTTCTTTCC+CGG | + | chr4.2:82942739-82942758 | None:intergenic | 30.0% |
| ! | TTTTACATTGCAGTATGAAG+AGG | + | chr4.2:82944155-82944174 | None:intergenic | 30.0% |
| !! | ATTGATAATGCGTAGTAAGT+AGG | + | chr4.2:82944494-82944513 | None:intergenic | 30.0% |
| !! | CATTATAGGTGCTTTTGTTT+GGG | + | chr4.2:82944767-82944786 | None:intergenic | 30.0% |
| !! | TGGGTTTAACTTTCATGTTT+TGG | - | chr4.2:82945798-82945817 | MS.gene92589:intron | 30.0% |
| !!! | GCTTTTTCACATTACATGTT+TGG | - | chr4.2:82943370-82943389 | MS.gene92589:CDS | 30.0% |
| !!! | GTTTTCCCTATTTTTTCATG+TGG | + | chr4.2:82941240-82941259 | None:intergenic | 30.0% |
| AAGCAATACCAAGCAATATG+GGG | + | chr4.2:82943354-82943373 | None:intergenic | 35.0% | |
| ACACTACACCTTCTTACATA+AGG | + | chr4.2:82941189-82941208 | None:intergenic | 35.0% | |
| ACCTACCAATTTAACCTAAC+TGG | - | chr4.2:82943205-82943224 | MS.gene92589:intron | 35.0% | |
| ATAAACAACAACTCCTCTAG+TGG | + | chr4.2:82944734-82944753 | None:intergenic | 35.0% | |
| ATAATTAAATTGCAGGGGAG+TGG | - | chr4.2:82943711-82943730 | MS.gene92589:intron | 35.0% | |
| ATGTGTTCATCTACTTTACG+TGG | + | chr4.2:82945409-82945428 | None:intergenic | 35.0% | |
| ATTAATTGTTGGTCCTGGTA+AGG | + | chr4.2:82941842-82941861 | None:intergenic | 35.0% | |
| ATTATCTTTGGTAAGGAGGT+TGG | + | chr4.2:82944234-82944253 | None:intergenic | 35.0% | |
| ATTTAACCTAACTGGACAAG+AGG | - | chr4.2:82943213-82943232 | MS.gene92589:intron | 35.0% | |
| CCAATGAAGAGTAAGATTGT+AGG | + | chr4.2:82941911-82941930 | None:intergenic | 35.0% | |
| CCTACAATCTTACTCTTCAT+TGG | - | chr4.2:82941908-82941927 | MS.gene92589:intron | 35.0% | |
| CTCCACTTATTCACTTAAAG+GGG | + | chr4.2:82944113-82944132 | None:intergenic | 35.0% | |
| CTTGTCCAGTTAGGTTAAAT+TGG | + | chr4.2:82943213-82943232 | None:intergenic | 35.0% | |
| GAAGCTAATAGAAGAGCAAA+AGG | + | chr4.2:82940997-82941016 | None:intergenic | 35.0% | |
| GATCAACATTAGCCAATGAA+GGG | + | chr4.2:82945651-82945670 | None:intergenic | 35.0% | |
| GGACTTCTTGATAAACCTTT+GGG | + | chr4.2:82943333-82943352 | None:intergenic | 35.0% | |
| TACAAGAAACGTTTAACAGG+AGG | + | chr4.2:82942032-82942051 | None:intergenic | 35.0% | |
| TAGCTACAACTGTGAAACTA+TGG | + | chr4.2:82944555-82944574 | None:intergenic | 35.0% | |
| TAGTCGTGGCTTAATGATAA+GGG | + | chr4.2:82943293-82943312 | None:intergenic | 35.0% | |
| TAGTTTCACAGTTGTAGCTA+TGG | - | chr4.2:82944555-82944574 | MS.gene92589:intron | 35.0% | |
| TCAGGCATAATTGGCATTAT+AGG | + | chr4.2:82944781-82944800 | None:intergenic | 35.0% | |
| TCATAAAAGAGGGTGAAGTT+TGG | - | chr4.2:82942652-82942671 | MS.gene92589:CDS | 35.0% | |
| TCATGGTTATCAGGCATAAT+TGG | + | chr4.2:82944790-82944809 | None:intergenic | 35.0% | |
| TCCAGTTAGGTTAAATTGGT+AGG | + | chr4.2:82943209-82943228 | None:intergenic | 35.0% | |
| TGAGAGAAATGCAACAGATA+CGG | - | chr4.2:82943757-82943776 | MS.gene92589:intron | 35.0% | |
| TTCAAGCAAATAATCCAGGT+TGG | - | chr4.2:82945935-82945954 | MS.gene92589:intron | 35.0% | |
| TTCCCCTTTAAGTGAATAAG+TGG | - | chr4.2:82944108-82944127 | MS.gene92589:intron | 35.0% | |
| TTTAACAACTGGTCCACATT+GGG | - | chr4.2:82945375-82945394 | MS.gene92589:intron | 35.0% | |
| TTTAACCTAACTGGACAAGA+GGG | - | chr4.2:82943214-82943233 | MS.gene92589:intron | 35.0% | |
| ! | AAACTTTGGTTCATCTCTAG+TGG | + | chr4.2:82945848-82945867 | None:intergenic | 35.0% |
| ! | ATGAATCTTTTGCTCTTCCT+AGG | - | chr4.2:82945524-82945543 | MS.gene92589:intron | 35.0% |
| ! | GCATTATAGGTGCTTTTGTT+TGG | + | chr4.2:82944768-82944787 | None:intergenic | 35.0% |
| ! | GTCTTCACCTTAGTTGATTT+AGG | + | chr4.2:82945697-82945716 | None:intergenic | 35.0% |
| ! | TCTTGATAAACCTTTGGGAA+GGG | + | chr4.2:82943328-82943347 | None:intergenic | 35.0% |
| ! | TGAATCTTTTGCTCTTCCTA+GGG | - | chr4.2:82945525-82945544 | MS.gene92589:intron | 35.0% |
| ! | TTCTTGATAAACCTTTGGGA+AGG | + | chr4.2:82943329-82943348 | None:intergenic | 35.0% |
| !! | AGAGGAGTTGTTGTTTATGA+TGG | - | chr4.2:82944736-82944755 | MS.gene92589:intron | 35.0% |
| !! | AGTTTTCAAGAGAACGTCAA+CGG | + | chr4.2:82944638-82944657 | None:intergenic | 35.0% |
| !! | TTGGCTTGTACATTGTCATT+TGG | - | chr4.2:82946054-82946073 | MS.gene92589:intron | 35.0% |
| !! | TTTTTAACTCCTTGGTCAGA+TGG | - | chr4.2:82943136-82943155 | MS.gene92589:intron | 35.0% |
| !!! | AACTTTCATGTTTTGGCACA+AGG | - | chr4.2:82945805-82945824 | MS.gene92589:intron | 35.0% |
| AAGGAGGTTGGATTATGAAG+AGG | + | chr4.2:82944222-82944241 | None:intergenic | 40.0% | |
| ACACTATAACACTGACGTTG+TGG | - | chr4.2:82944594-82944613 | MS.gene92589:intron | 40.0% | |
| ACATTGCAGTATGAAGAGGT+TGG | + | chr4.2:82944151-82944170 | None:intergenic | 40.0% | |
| ACCAACAATTAATGCTCGAG+AGG | - | chr4.2:82941849-82941868 | MS.gene92589:intron | 40.0% | |
| ACCACTAACATAACCACTAG+AGG | - | chr4.2:82944718-82944737 | MS.gene92589:intron | 40.0% | |
| AGGTTGGATTATGAAGAGGT+TGG | + | chr4.2:82944218-82944237 | None:intergenic | 40.0% | |
| ATTTGCTTCTGCTGCTATTG+TGG | - | chr4.2:82941020-82941039 | MS.gene92589:CDS | 40.0% | |
| ATTTGGAAACACACTTGCCA+TGG | - | chr4.2:82946071-82946090 | MS.gene92589:intron | 40.0% | |
| CCAACAATTAATGCTCGAGA+GGG | - | chr4.2:82941850-82941869 | MS.gene92589:intron | 40.0% | |
| CTAGTCGTGGCTTAATGATA+AGG | + | chr4.2:82943294-82943313 | None:intergenic | 40.0% | |
| CTTATCATTAAGCCACGACT+AGG | - | chr4.2:82943292-82943311 | MS.gene92589:CDS | 40.0% | |
| GAATAGTGAAGTCTTCAACC+TGG | + | chr4.2:82941777-82941796 | None:intergenic | 40.0% | |
| GAGAGAAATGCAACAGATAC+GGG | - | chr4.2:82943758-82943777 | MS.gene92589:intron | 40.0% | |
| GATTTAGGTGCAAATGCAAG+TGG | + | chr4.2:82945682-82945701 | None:intergenic | 40.0% | |
| GGAGAAAGAATTAAGACCGA+TGG | + | chr4.2:82942503-82942522 | None:intergenic | 40.0% | |
| GGATCAACATTAGCCAATGA+AGG | + | chr4.2:82945652-82945671 | None:intergenic | 40.0% | |
| GGGACTTCTTGATAAACCTT+TGG | + | chr4.2:82943334-82943353 | None:intergenic | 40.0% | |
| GTGTAAAACTTGTGAGCTGT+TGG | + | chr4.2:82944817-82944836 | None:intergenic | 40.0% | |
| GTTGGTGTATCATGGTTATC+AGG | + | chr4.2:82944799-82944818 | None:intergenic | 40.0% | |
| GTTTAACAACTGGTCCACAT+TGG | - | chr4.2:82945374-82945393 | MS.gene92589:intron | 40.0% | |
| TACAAGCTCAAAGTGAAGCA+AGG | - | chr4.2:82944463-82944482 | MS.gene92589:intron | 40.0% | |
| TCATCTACTTTACGTGGAAC+TGG | + | chr4.2:82945403-82945422 | None:intergenic | 40.0% | |
| TCCTCTAGTGGTTATGTTAG+TGG | + | chr4.2:82944722-82944741 | None:intergenic | 40.0% | |
| TCTGATAGTTGATCGACCAT+CGG | - | chr4.2:82942484-82942503 | MS.gene92589:CDS | 40.0% | |
| TCTTGCTAACGAGTGTTCTA+AGG | - | chr4.2:82942321-82942340 | MS.gene92589:CDS | 40.0% | |
| TGGTTCCAACACTTGAAGAA+CGG | + | chr4.2:82944702-82944721 | None:intergenic | 40.0% | |
| TTGCATGCATTCACGCAATT+AGG | - | chr4.2:82943448-82943467 | MS.gene92589:intron | 40.0% | |
| TTTAGTACAACACAACGACC+TGG | + | chr4.2:82945478-82945497 | None:intergenic | 40.0% | |
| TTTGGAAACACACTTGCCAT+GGG | - | chr4.2:82946072-82946091 | MS.gene92589:intron | 40.0% | |
| ! | CTTGATAAACCTTTGGGAAG+GGG | + | chr4.2:82943327-82943346 | None:intergenic | 40.0% |
| ! | GAATCTTTTGCTCTTCCTAG+GGG | - | chr4.2:82945526-82945545 | MS.gene92589:intron | 40.0% |
| !! | GAAATGGTGTTACGCATTTG+AGG | + | chr4.2:82945883-82945902 | None:intergenic | 40.0% |
| !! | TATAGGTGCTTTTGTTTGGG+AGG | + | chr4.2:82944764-82944783 | None:intergenic | 40.0% |
| !!! | ATGGCTTTTGAGGTTGAGAA+TGG | - | chr4.2:82946103-82946122 | MS.gene92589:CDS | 40.0% |
| !!! | CATGTTTTGGCACAAGGTTT+TGG | - | chr4.2:82945811-82945830 | MS.gene92589:intron | 40.0% |
| !!! | TGGCTTTTGAGGTTGAGAAT+GGG | - | chr4.2:82946104-82946123 | MS.gene92589:CDS | 40.0% |
| AACACCATTTCTGTGCCAGT+GGG | - | chr4.2:82945892-82945911 | MS.gene92589:intron | 45.0% | |
| ATTAAATTGCAGGGGAGTGG+TGG | - | chr4.2:82943714-82943733 | MS.gene92589:intron | 45.0% | |
| ATTGAGAAACCTCTACCCCT+AGG | + | chr4.2:82945544-82945563 | None:intergenic | 45.0% | |
| CAACACTTGGGAAGATTAGC+TGG | + | chr4.2:82946160-82946179 | None:intergenic | 45.0% | |
| CAAGAAGTCCCCATATTGCT+TGG | - | chr4.2:82943343-82943362 | MS.gene92589:CDS | 45.0% | |
| CCAACACTTGAAGAACGGTA+TGG | + | chr4.2:82944697-82944716 | None:intergenic | 45.0% | |
| CCATACCGTTCTTCAAGTGT+TGG | - | chr4.2:82944694-82944713 | MS.gene92589:intron | 45.0% | |
| CCCTCTCGAGCATTAATTGT+TGG | + | chr4.2:82941853-82941872 | None:intergenic | 45.0% | |
| CGAGCATTAATTGTTGGTCC+TGG | + | chr4.2:82941847-82941866 | None:intergenic | 45.0% | |
| CTAGAGCAATGCATCAATCC+AGG | - | chr4.2:82945451-82945470 | MS.gene92589:intron | 45.0% | |
| GCAAATGCAAGTGGCTTAGA+AGG | + | chr4.2:82945673-82945692 | None:intergenic | 45.0% | |
| GGGTAGAGGTTTCTCAATGT+TGG | - | chr4.2:82945546-82945565 | MS.gene92589:intron | 45.0% | |
| TAACACCATTTCTGTGCCAG+TGG | - | chr4.2:82945891-82945910 | MS.gene92589:intron | 45.0% | |
| TATTCTGGACCATCTGACCA+AGG | + | chr4.2:82943148-82943167 | None:intergenic | 45.0% | |
| TCCTGGTAAGGTTCCATTGA+CGG | + | chr4.2:82941830-82941849 | None:intergenic | 45.0% | |
| TGTGAGCTGTTGGTGTATCA+TGG | + | chr4.2:82944807-82944826 | None:intergenic | 45.0% | |
| TTGGAAACACACTTGCCATG+GGG | - | chr4.2:82946073-82946092 | MS.gene92589:intron | 45.0% | |
| ! | ACCAGATGGTATTGGGCATT+GGG | + | chr4.2:82943176-82943195 | None:intergenic | 45.0% |
| !! | GCTTAATGATAAGGGCACCA+TGG | + | chr4.2:82943285-82943304 | None:intergenic | 45.0% |
| !! | GGGCATTGGGTTACATATTC+TGG | + | chr4.2:82943163-82943182 | None:intergenic | 45.0% |
| !! | AAACAAAATTATAAATAATA+TGG | - | chr4.2:82942581-82942600 | MS.gene92589:CDS | 5.0% |
| !! | TTATTTAATAATTTATGAAT+TGG | + | chr4.2:82942364-82942383 | None:intergenic | 5.0% |
| AAAGCCATTGCTAACCCCCA+TGG | + | chr4.2:82946091-82946110 | None:intergenic | 50.0% | |
| ACCCAATGCCCAATACCATC+TGG | - | chr4.2:82943172-82943191 | MS.gene92589:intron | 50.0% | |
| AGAACGTCAACGGTTTGACC+AGG | + | chr4.2:82944628-82944647 | None:intergenic | 50.0% | |
| AGCTGCCACCAGATGGTATT+GGG | + | chr4.2:82943183-82943202 | None:intergenic | 50.0% | |
| ATGCATTTGACTCCGCTGGT+GGG | + | chr4.2:82943787-82943806 | None:intergenic | 50.0% | |
| CAATGCATCAATCCAGGACC+AGG | - | chr4.2:82945457-82945476 | MS.gene92589:intron | 50.0% | |
| CAATGCCCAATACCATCTGG+TGG | - | chr4.2:82943175-82943194 | MS.gene92589:intron | 50.0% | |
| CAGGTTATCACTGCCGTCAA+TGG | - | chr4.2:82941814-82941833 | MS.gene92589:intron | 50.0% | |
| GGCACTGTTGTTCCAAGAGT+AGG | + | chr4.2:82946130-82946149 | None:intergenic | 50.0% | |
| GTGCGTGTGTGTCAGATTCA+TGG | + | chr4.2:82945155-82945174 | None:intergenic | 50.0% | |
| GTGTACCCTCTTGTCCAGTT+AGG | + | chr4.2:82943222-82943241 | None:intergenic | 50.0% | |
| GTTGAGAATGGGCCTACTCT+TGG | - | chr4.2:82946115-82946134 | MS.gene92589:CDS | 50.0% | |
| GTTGATGCATTTGACTCCGC+TGG | + | chr4.2:82943791-82943810 | None:intergenic | 50.0% | |
| TAGCTGCCACCAGATGGTAT+TGG | + | chr4.2:82943184-82943203 | None:intergenic | 50.0% | |
| TAGGTATAGCTGCCACCAGA+TGG | + | chr4.2:82943190-82943209 | None:intergenic | 50.0% | |
| TGGAAACACACTTGCCATGG+GGG | - | chr4.2:82946074-82946093 | MS.gene92589:intron | 50.0% | |
| TTGACGGCAGTGATAACCTG+TGG | + | chr4.2:82941814-82941833 | None:intergenic | 50.0% | |
| TTTGCTCTTCCTAGGGGTAG+AGG | - | chr4.2:82945532-82945551 | MS.gene92589:intron | 50.0% | |
| ! | CACCAGATGGTATTGGGCAT+TGG | + | chr4.2:82943177-82943196 | None:intergenic | 50.0% |
| ! | CACTTGGGAAGATTAGCTGG+TGG | + | chr4.2:82946157-82946176 | None:intergenic | 50.0% |
| ! | CTGGACAAGAGGGTACACTT+TGG | - | chr4.2:82943224-82943243 | MS.gene92589:intron | 50.0% |
| ! | GACAAGAGGGTACACTTTGG+TGG | - | chr4.2:82943227-82943246 | MS.gene92589:intron | 50.0% |
| ! | TTCCTACGTGCTACTGTCCA+TGG | - | chr4.2:82943265-82943284 | MS.gene92589:intron | 50.0% |
| ! | TTGGGAAGATTAGCTGGTGG+AGG | + | chr4.2:82946154-82946173 | None:intergenic | 50.0% |
| !! | GGGGTTAGCAATGGCTTTTG+AGG | - | chr4.2:82946093-82946112 | MS.gene92589:CDS | 50.0% |
| ACAACACAACGACCTGGTCC+TGG | + | chr4.2:82945472-82945491 | None:intergenic | 55.0% | |
| ACCATTTCTGTGCCAGTGGG+AGG | - | chr4.2:82945895-82945914 | MS.gene92589:intron | 55.0% | |
| AGATACGGGTAACCCACCAG+CGG | - | chr4.2:82943772-82943791 | MS.gene92589:intron | 55.0% | |
| ATAACAGCCCATCCTCCCAC+TGG | + | chr4.2:82945910-82945929 | None:intergenic | 55.0% | |
| CACCATGGACAGTAGCACGT+AGG | + | chr4.2:82943270-82943289 | None:intergenic | 55.0% | |
| CGGCAGTGATAACCTGTGGA+CGG | + | chr4.2:82941810-82941829 | None:intergenic | 55.0% | |
| CGTGGAACTGGAACCCAATG+TGG | + | chr4.2:82945391-82945410 | None:intergenic | 55.0% | |
| GATGCATTTGACTCCGCTGG+TGG | + | chr4.2:82943788-82943807 | None:intergenic | 55.0% | |
| GCCGTCAATGGAACCTTACC+AGG | - | chr4.2:82941826-82941845 | MS.gene92589:intron | 55.0% | |
| TCCTCCCACTGGCACAGAAA+TGG | + | chr4.2:82945899-82945918 | None:intergenic | 55.0% | |
| TCGCTCATACCCCTTCCCAA+AGG | - | chr4.2:82943315-82943334 | MS.gene92589:CDS | 55.0% | |
| TTCTGTGCCAGTGGGAGGAT+GGG | - | chr4.2:82945900-82945919 | MS.gene92589:intron | 55.0% | |
| TTTCTGTGCCAGTGGGAGGA+TGG | - | chr4.2:82945899-82945918 | MS.gene92589:intron | 55.0% | |
| ! | CTTGCCATGGGGGTTAGCAA+TGG | - | chr4.2:82946084-82946103 | MS.gene92589:intron | 55.0% |
| ! | GGAAGATTAGCTGGTGGAGG+AGG | + | chr4.2:82946151-82946170 | None:intergenic | 55.0% |
| GGGTATGAGCGACCTAGTCG+TGG | + | chr4.2:82943307-82943326 | None:intergenic | 60.0% | |
| TCAGCGATTGTGCCGTCCAC+AGG | - | chr4.2:82941795-82941814 | MS.gene92589:intron | 60.0% | |
| GACGTTGTGGTGCTTGCGCC+TGG | - | chr4.2:82944607-82944626 | MS.gene92589:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 82940964 | 82946180 | 82940964 | ID=MS.gene92589 |
| chr4.2 | mRNA | 82940964 | 82946180 | 82940964 | ID=MS.gene92589.t1;Parent=MS.gene92589 |
| chr4.2 | exon | 82946088 | 82946180 | 82946088 | ID=MS.gene92589.t1.exon1;Parent=MS.gene92589.t1 |
| chr4.2 | CDS | 82946088 | 82946180 | 82946088 | ID=cds.MS.gene92589.t1;Parent=MS.gene92589.t1 |
| chr4.2 | exon | 82945215 | 82945366 | 82945215 | ID=MS.gene92589.t1.exon2;Parent=MS.gene92589.t1 |
| chr4.2 | CDS | 82945215 | 82945366 | 82945215 | ID=cds.MS.gene92589.t1;Parent=MS.gene92589.t1 |
| chr4.2 | exon | 82943780 | 82944024 | 82943780 | ID=MS.gene92589.t1.exon3;Parent=MS.gene92589.t1 |
| chr4.2 | CDS | 82943780 | 82944024 | 82943780 | ID=cds.MS.gene92589.t1;Parent=MS.gene92589.t1 |
| chr4.2 | exon | 82943290 | 82943418 | 82943290 | ID=MS.gene92589.t1.exon4;Parent=MS.gene92589.t1 |
| chr4.2 | CDS | 82943290 | 82943418 | 82943290 | ID=cds.MS.gene92589.t1;Parent=MS.gene92589.t1 |
| chr4.2 | exon | 82942297 | 82942686 | 82942297 | ID=MS.gene92589.t1.exon5;Parent=MS.gene92589.t1 |
| chr4.2 | CDS | 82942297 | 82942686 | 82942297 | ID=cds.MS.gene92589.t1;Parent=MS.gene92589.t1 |
| chr4.2 | exon | 82941192 | 82941770 | 82941192 | ID=MS.gene92589.t1.exon6;Parent=MS.gene92589.t1 |
| chr4.2 | CDS | 82941192 | 82941770 | 82941192 | ID=cds.MS.gene92589.t1;Parent=MS.gene92589.t1 |
| chr4.2 | exon | 82940964 | 82941094 | 82940964 | ID=MS.gene92589.t1.exon7;Parent=MS.gene92589.t1 |
| chr4.2 | CDS | 82940964 | 82941094 | 82940964 | ID=cds.MS.gene92589.t1;Parent=MS.gene92589.t1 |
| Gene Sequence |
| Protein sequence |
