Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057923.t1 | XP_013459054.1 | 93.4 | 483 | 11 | 2 | 1 | 462 | 1 | 483 | 1.70E-264 | 921.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057923.t1 | Q8VYG3 | 67.3 | 462 | 129 | 3 | 21 | 460 | 24 | 485 | 1.2e-183 | 644.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057923.t1 | A0A072UTZ1 | 93.4 | 483 | 11 | 2 | 1 | 462 | 1 | 483 | 1.2e-264 | 921.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057923.t1 | MTR_3g023740 | 93.375 | 483 | 11 | 2 | 1 | 462 | 1 | 483 | 0.0 | 932 |
MS.gene057923.t1 | MTR_3g105230 | 84.435 | 469 | 52 | 2 | 1 | 448 | 1 | 469 | 0.0 | 840 |
MS.gene057923.t1 | MTR_5g009970 | 47.137 | 454 | 216 | 6 | 29 | 458 | 40 | 493 | 1.74e-144 | 422 |
MS.gene057923.t1 | MTR_5g010000 | 46.476 | 454 | 219 | 5 | 29 | 458 | 39 | 492 | 1.56e-138 | 407 |
MS.gene057923.t1 | MTR_5g085730 | 42.084 | 499 | 251 | 8 | 1 | 461 | 1 | 499 | 1.30e-131 | 390 |
MS.gene057923.t1 | MTR_5g093590 | 43.524 | 471 | 228 | 5 | 29 | 461 | 33 | 503 | 1.87e-129 | 384 |
MS.gene057923.t1 | MTR_3g080190 | 43.096 | 478 | 235 | 6 | 22 | 462 | 32 | 509 | 4.92e-129 | 384 |
MS.gene057923.t1 | MTR_3g080810 | 44.130 | 460 | 221 | 7 | 30 | 456 | 35 | 491 | 4.12e-128 | 380 |
MS.gene057923.t1 | MTR_8g099410 | 43.497 | 469 | 228 | 7 | 27 | 459 | 25 | 492 | 7.00e-128 | 380 |
MS.gene057923.t1 | MTR_8g104820 | 43.939 | 462 | 221 | 10 | 30 | 456 | 30 | 488 | 1.79e-127 | 379 |
MS.gene057923.t1 | MTR_8g099410 | 43.497 | 469 | 228 | 7 | 27 | 459 | 25 | 492 | 1.86e-126 | 380 |
MS.gene057923.t1 | MTR_3g117500 | 43.601 | 461 | 224 | 8 | 30 | 456 | 24 | 482 | 1.45e-124 | 371 |
MS.gene057923.t1 | MTR_5g009970 | 45.894 | 414 | 200 | 6 | 69 | 458 | 6 | 419 | 1.51e-123 | 367 |
MS.gene057923.t1 | MTR_4g035955 | 42.291 | 454 | 234 | 4 | 29 | 456 | 13 | 464 | 6.79e-119 | 356 |
MS.gene057923.t1 | MTR_3g010330 | 42.672 | 464 | 235 | 6 | 25 | 459 | 20 | 481 | 1.86e-118 | 355 |
MS.gene057923.t1 | MTR_4g035930 | 40.969 | 454 | 240 | 4 | 29 | 456 | 14 | 465 | 4.64e-116 | 349 |
MS.gene057923.t1 | MTR_4g074960 | 41.365 | 469 | 237 | 8 | 29 | 460 | 27 | 494 | 6.70e-116 | 353 |
MS.gene057923.t1 | MTR_4g035975 | 42.431 | 469 | 228 | 12 | 30 | 460 | 27 | 491 | 6.79e-115 | 347 |
MS.gene057923.t1 | MTR_5g009970 | 44.388 | 392 | 194 | 6 | 91 | 458 | 1 | 392 | 3.27e-111 | 334 |
MS.gene057923.t1 | MTR_1g088190 | 42.333 | 463 | 212 | 9 | 30 | 459 | 39 | 479 | 2.05e-110 | 335 |
MS.gene057923.t1 | MTR_1g037340 | 41.739 | 460 | 236 | 6 | 30 | 459 | 25 | 482 | 1.93e-109 | 332 |
MS.gene057923.t1 | MTR_3g113720 | 38.675 | 468 | 244 | 9 | 31 | 460 | 58 | 520 | 2.10e-104 | 321 |
MS.gene057923.t1 | MTR_8g075990 | 37.607 | 468 | 249 | 9 | 31 | 460 | 64 | 526 | 4.66e-92 | 289 |
MS.gene057923.t1 | MTR_5g009970 | 45.062 | 324 | 165 | 4 | 148 | 458 | 1 | 324 | 2.06e-89 | 276 |
MS.gene057923.t1 | MTR_2g028480 | 35.787 | 489 | 246 | 12 | 30 | 459 | 111 | 590 | 4.94e-82 | 265 |
MS.gene057923.t1 | MTR_3g090540 | 32.108 | 517 | 276 | 13 | 8 | 458 | 76 | 583 | 5.78e-77 | 251 |
MS.gene057923.t1 | MTR_3g082440 | 35.510 | 490 | 245 | 16 | 30 | 460 | 116 | 593 | 1.83e-74 | 246 |
MS.gene057923.t1 | MTR_1g088190 | 41.118 | 304 | 126 | 7 | 30 | 301 | 39 | 321 | 1.98e-59 | 198 |
MS.gene057923.t1 | MTR_1g111340 | 51.515 | 165 | 36 | 3 | 236 | 390 | 1 | 131 | 9.57e-42 | 145 |
MS.gene057923.t1 | MTR_7g108925 | 44.371 | 151 | 82 | 2 | 310 | 459 | 50 | 199 | 1.27e-36 | 134 |
MS.gene057923.t1 | MTR_4g128810 | 26.651 | 424 | 203 | 14 | 43 | 460 | 14 | 335 | 4.50e-30 | 120 |
MS.gene057923.t1 | MTR_1g037320 | 39.583 | 192 | 100 | 3 | 91 | 267 | 1 | 191 | 1.68e-27 | 111 |
MS.gene057923.t1 | MTR_1g037320 | 43.443 | 122 | 67 | 2 | 336 | 456 | 169 | 289 | 1.11e-24 | 103 |
MS.gene057923.t1 | MTR_0393s0050 | 44.186 | 129 | 71 | 1 | 310 | 437 | 27 | 155 | 5.28e-26 | 104 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057923.t1 | AT3G43860 | 66.176 | 476 | 137 | 4 | 9 | 460 | 10 | 485 | 0.0 | 634 |
MS.gene057923.t1 | AT3G43860 | 66.176 | 476 | 137 | 4 | 9 | 460 | 10 | 485 | 0.0 | 634 |
MS.gene057923.t1 | AT4G23560 | 46.476 | 454 | 218 | 6 | 31 | 460 | 24 | 476 | 1.91e-132 | 391 |
MS.gene057923.t1 | AT4G11050 | 44.968 | 467 | 220 | 7 | 30 | 460 | 26 | 491 | 2.48e-132 | 393 |
MS.gene057923.t1 | AT4G11050 | 44.968 | 467 | 220 | 7 | 30 | 460 | 26 | 491 | 1.37e-131 | 394 |
MS.gene057923.t1 | AT4G11050 | 44.968 | 467 | 220 | 7 | 30 | 460 | 26 | 491 | 1.62e-131 | 394 |
MS.gene057923.t1 | AT4G09740 | 46.053 | 456 | 221 | 6 | 29 | 460 | 22 | 476 | 3.73e-131 | 388 |
MS.gene057923.t1 | AT4G02290 | 44.589 | 462 | 221 | 7 | 30 | 459 | 52 | 510 | 1.02e-127 | 380 |
MS.gene057923.t1 | AT1G64390 | 43.897 | 467 | 225 | 7 | 30 | 460 | 25 | 490 | 2.59e-126 | 380 |
MS.gene057923.t1 | AT2G32990 | 43.376 | 468 | 228 | 6 | 27 | 457 | 36 | 503 | 7.29e-126 | 376 |
MS.gene057923.t1 | AT1G70710 | 43.534 | 464 | 225 | 9 | 30 | 460 | 28 | 487 | 3.88e-125 | 373 |
MS.gene057923.t1 | AT1G02800 | 44.805 | 462 | 218 | 8 | 30 | 459 | 43 | 499 | 7.94e-125 | 372 |
MS.gene057923.t1 | AT1G23210 | 42.457 | 464 | 230 | 9 | 30 | 460 | 28 | 487 | 4.55e-122 | 365 |
MS.gene057923.t1 | AT1G22880 | 43.261 | 460 | 229 | 8 | 30 | 460 | 24 | 480 | 2.25e-118 | 355 |
MS.gene057923.t1 | AT1G71380 | 43.261 | 460 | 229 | 8 | 30 | 460 | 24 | 480 | 2.53e-118 | 355 |
MS.gene057923.t1 | AT4G39010 | 40.678 | 472 | 243 | 9 | 24 | 460 | 23 | 492 | 9.47e-116 | 349 |
MS.gene057923.t1 | AT2G44550 | 41.357 | 457 | 236 | 7 | 30 | 456 | 33 | 487 | 1.11e-111 | 338 |
MS.gene057923.t1 | AT2G44540 | 40.638 | 470 | 244 | 8 | 22 | 458 | 23 | 490 | 2.24e-110 | 335 |
MS.gene057923.t1 | AT1G19940 | 41.921 | 458 | 227 | 9 | 30 | 453 | 48 | 500 | 3.76e-110 | 335 |
MS.gene057923.t1 | AT1G19940 | 41.921 | 458 | 227 | 9 | 30 | 453 | 48 | 500 | 3.76e-110 | 335 |
MS.gene057923.t1 | AT2G44570 | 41.113 | 467 | 241 | 8 | 25 | 459 | 28 | 492 | 2.98e-107 | 327 |
MS.gene057923.t1 | AT2G44560 | 39.592 | 490 | 261 | 8 | 1 | 459 | 6 | 491 | 4.70e-107 | 327 |
MS.gene057923.t1 | AT1G48930 | 40.860 | 465 | 238 | 7 | 29 | 457 | 29 | 492 | 6.50e-107 | 330 |
MS.gene057923.t1 | AT4G39000 | 38.280 | 465 | 252 | 5 | 30 | 460 | 25 | 488 | 7.34e-105 | 321 |
MS.gene057923.t1 | AT1G75680 | 41.228 | 456 | 223 | 10 | 31 | 449 | 58 | 505 | 2.92e-102 | 315 |
MS.gene057923.t1 | AT4G38990 | 38.806 | 469 | 241 | 10 | 30 | 456 | 23 | 487 | 1.86e-100 | 310 |
MS.gene057923.t1 | AT4G02290 | 41.646 | 401 | 199 | 7 | 91 | 459 | 1 | 398 | 2.89e-95 | 293 |
MS.gene057923.t1 | AT1G22880 | 40.602 | 399 | 205 | 8 | 91 | 460 | 1 | 396 | 3.09e-91 | 283 |
MS.gene057923.t1 | AT4G39010 | 38.043 | 368 | 193 | 6 | 24 | 357 | 23 | 389 | 7.64e-86 | 268 |
MS.gene057923.t1 | AT5G49720 | 35.583 | 489 | 247 | 14 | 30 | 459 | 108 | 587 | 2.27e-80 | 261 |
MS.gene057923.t1 | AT1G19940 | 39.612 | 361 | 183 | 7 | 30 | 356 | 48 | 407 | 2.10e-75 | 243 |
MS.gene057923.t1 | AT1G65610 | 35.510 | 490 | 248 | 16 | 30 | 462 | 116 | 594 | 1.22e-73 | 243 |
MS.gene057923.t1 | AT4G24260 | 35.306 | 490 | 247 | 14 | 30 | 459 | 108 | 587 | 5.82e-73 | 241 |
MS.gene057923.t1 | AT2G44570 | 39.669 | 363 | 186 | 7 | 25 | 356 | 28 | 388 | 2.75e-72 | 234 |
MS.gene057923.t1 | AT1G22880 | 44.333 | 300 | 137 | 6 | 30 | 301 | 24 | 321 | 2.01e-70 | 227 |
MS.gene057923.t1 | AT4G38990 | 36.336 | 333 | 166 | 6 | 30 | 335 | 23 | 336 | 6.85e-59 | 197 |
MS.gene057923.t1 | AT4G24260 | 32.558 | 387 | 195 | 12 | 30 | 356 | 108 | 488 | 1.75e-42 | 157 |
MS.gene057923.t1 | AT4G24260 | 33.131 | 329 | 157 | 10 | 30 | 301 | 108 | 430 | 1.20e-38 | 146 |
Find 103 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCGTTTGGTGATAAATT+TGG | 0.163056 | 3.3:+15022117 | None:intergenic |
TCTAGCAAAGCTTGCTTCTT+TGG | 0.193643 | 3.3:-15021920 | MS.gene057923:CDS |
AAACAGATGGATTACATATT+AGG | 0.203643 | 3.3:-15022222 | MS.gene057923:intron |
TTATATACTTACTTGCATTT+TGG | 0.211501 | 3.3:+15022697 | None:intergenic |
ATTGAATAGGTTGACCTATC+AGG | 0.261586 | 3.3:-15023973 | MS.gene057923:intron |
TCTCCTCAATAAAGCAAAAT+TGG | 0.261612 | 3.3:-15023572 | MS.gene057923:intron |
AGGAGACGGCGAGCATATTT+AGG | 0.264621 | 3.3:+15023589 | None:intergenic |
CCAAATCCACATGAGCTAAC+TGG | 0.270045 | 3.3:-15022048 | MS.gene057923:CDS |
TGGATAATAAAAGAGTATAT+TGG | 0.277192 | 3.3:-15024430 | MS.gene057923:CDS |
CTAGCAAAGCTTGCTTCTTT+GGG | 0.289529 | 3.3:-15021919 | MS.gene057923:CDS |
AGATCATACATGGTAGGATT+TGG | 0.292392 | 3.3:-15022183 | MS.gene057923:CDS |
GTCAAATTAATTTGCTTGTA+AGG | 0.297987 | 3.3:+15022961 | None:intergenic |
GCTGGAGACAATGTGAAATA+TGG | 0.300456 | 3.3:-15023937 | MS.gene057923:CDS |
CCCTTCTACTGCTCCTATTC+AGG | 0.300909 | 3.3:-15023319 | MS.gene057923:CDS |
CCAGTTAGCTCATGTGGATT+TGG | 0.301161 | 3.3:+15022048 | None:intergenic |
TTTGAAGCAACAAATGAAAT+AGG | 0.311811 | 3.3:-15023853 | MS.gene057923:CDS |
ATTTGCTTGTAAGGACTATC+AGG | 0.334629 | 3.3:+15022970 | None:intergenic |
TTCTTAGAGGCGCAAAGATC+AGG | 0.334942 | 3.3:-15024311 | MS.gene057923:CDS |
GGAAACTCCCTCCTAGTAAT+AGG | 0.349849 | 3.3:-15024289 | MS.gene057923:CDS |
AAAATCTCTCATCTTCTTAG+AGG | 0.350453 | 3.3:-15024324 | MS.gene057923:CDS |
AACAGATGGATTACATATTA+GGG | 0.358207 | 3.3:-15022221 | MS.gene057923:intron |
ACCATGTATGATCTTCCTTC+AGG | 0.359145 | 3.3:+15022192 | None:intergenic |
GGATAATAAAAGAGTATATT+GGG | 0.376123 | 3.3:-15024429 | MS.gene057923:CDS |
GCCTGAATAGGAGCAGTAGA+AGG | 0.378778 | 3.3:+15023318 | None:intergenic |
AGGAAACATGATACTTGTTA+AGG | 0.381146 | 3.3:-15024375 | MS.gene057923:CDS |
ATATTCAAAATGCCATTAGA+TGG | 0.385203 | 3.3:-15023828 | MS.gene057923:CDS |
CAACAATGATGATCATCAAC+TGG | 0.390024 | 3.3:+15023742 | None:intergenic |
TTGGCACTGAAGCACCTCTA+TGG | 0.398776 | 3.3:+15022136 | None:intergenic |
GATCATACATGGTAGGATTT+GGG | 0.403815 | 3.3:-15022182 | MS.gene057923:CDS |
TATGTGCAAGGTTCGGTCTT+AGG | 0.410154 | 3.3:+15021967 | None:intergenic |
CAAATCCACATGAGCTAACT+GGG | 0.410353 | 3.3:-15022047 | MS.gene057923:CDS |
CTATGGTGAGCTTGTGTTGG+TGG | 0.424826 | 3.3:+15022153 | None:intergenic |
GAATTGGCAAAATCTCATAA+AGG | 0.424938 | 3.3:-15023361 | MS.gene057923:CDS |
ATAATCTGTACCCCATCTAA+TGG | 0.430183 | 3.3:+15023816 | None:intergenic |
TCACAGTTACTACATTATCA+TGG | 0.431674 | 3.3:-15023900 | MS.gene057923:CDS |
GGACAGTTTATCTCTTCGTT+TGG | 0.432535 | 3.3:+15022105 | None:intergenic |
AGCTGAAACTTCTGCTGCTA+TGG | 0.438179 | 3.3:-15023644 | MS.gene057923:CDS |
TAGCCATTTCTTAAAGCTTG+TGG | 0.441135 | 3.3:+15022083 | None:intergenic |
TAACAAGTATCATGTTTCCT+TGG | 0.445707 | 3.3:+15024378 | None:intergenic |
GTCCCACAAGCTTTAAGAAA+TGG | 0.446283 | 3.3:-15022086 | MS.gene057923:CDS |
ACATACATTATAGCCTGAAT+AGG | 0.446803 | 3.3:+15023306 | None:intergenic |
AAGCAAATTAATTTGACTCC+TGG | 0.449579 | 3.3:-15022955 | MS.gene057923:intron |
TTGAACTTGTCGTTGATGTC+AGG | 0.451159 | 3.3:+15022009 | None:intergenic |
CTCCTAGTAATAGGCTCCCT+TGG | 0.456996 | 3.3:-15024280 | MS.gene057923:CDS |
TCTCATAAAGGAACCTATGA+TGG | 0.468029 | 3.3:-15023349 | MS.gene057923:CDS |
GGAAACATGATACTTGTTAA+GGG | 0.470689 | 3.3:-15024374 | MS.gene057923:CDS |
ACATGGCTTGCTTTGTTCCA+AGG | 0.473298 | 3.3:-15024395 | MS.gene057923:CDS |
GGAGACTCAGCAGTGGATGA+TGG | 0.473612 | 3.3:-15024254 | MS.gene057923:CDS |
AGCCATTTCTTAAAGCTTGT+GGG | 0.474167 | 3.3:+15022084 | None:intergenic |
ACTTGCCAAATATAATCAAA+AGG | 0.476084 | 3.3:-15022768 | MS.gene057923:CDS |
TTGAATAGGTTGACCTATCA+GGG | 0.476637 | 3.3:-15023972 | MS.gene057923:intron |
GAGCTAACTGGGGCCATTGT+TGG | 0.483453 | 3.3:-15022036 | MS.gene057923:CDS |
AGTTGATGATCATCATTGTT+GGG | 0.484523 | 3.3:-15023740 | MS.gene057923:CDS |
GAAGGGACATTCTCCATCAT+AGG | 0.487500 | 3.3:+15023336 | None:intergenic |
TATTCAAAATGCCATTAGAT+GGG | 0.489997 | 3.3:-15023827 | MS.gene057923:CDS |
CAGTTGATGATCATCATTGT+TGG | 0.497946 | 3.3:-15023741 | MS.gene057923:CDS |
CTGCTGAGTCTCCTCTCCAA+GGG | 0.516126 | 3.3:+15024264 | None:intergenic |
TAAGGGTCAATTTAATTACA+AGG | 0.517252 | 3.3:-15024357 | MS.gene057923:CDS |
CTCCAAGGGAGCCTATTACT+AGG | 0.523457 | 3.3:+15024278 | None:intergenic |
ATTAACATATGTGCAAGGTT+CGG | 0.528389 | 3.3:+15021960 | None:intergenic |
CACAGTTACTACATTATCAT+GGG | 0.530052 | 3.3:-15023899 | MS.gene057923:CDS |
CCTCTATGGTGAGCTTGTGT+TGG | 0.530222 | 3.3:+15022150 | None:intergenic |
CTAACTGGGGCCATTGTTGG+TGG | 0.545679 | 3.3:-15022033 | MS.gene057923:CDS |
GCTGGTGGCATATTGTGTAT+TGG | 0.548328 | 3.3:+15022823 | None:intergenic |
TTTGGCAAAATCAAGGAGAT+GGG | 0.548916 | 3.3:+15022715 | None:intergenic |
CTGGAGACAATGTGAAATAT+GGG | 0.550838 | 3.3:-15023936 | MS.gene057923:CDS |
ACTGCTGAGTCTCCTCTCCA+AGG | 0.554564 | 3.3:+15024263 | None:intergenic |
ATGGCCCCAGTTAGCTCATG+TGG | 0.556380 | 3.3:+15022042 | None:intergenic |
TCTTAGAGGCGCAAAGATCA+GGG | 0.558185 | 3.3:-15024310 | MS.gene057923:CDS |
ATATATAGGATGAGCTAATG+TGG | 0.565889 | 3.3:-15023200 | MS.gene057923:intron |
TTGCTAGAACACCGACTGCA+AGG | 0.568169 | 3.3:+15021935 | None:intergenic |
GGGTTTATTCATATGAGAGA+TGG | 0.573447 | 3.3:-15022848 | MS.gene057923:CDS |
TATAATCAAAAGGTCAAATG+TGG | 0.574640 | 3.3:-15022758 | MS.gene057923:CDS |
CATGGCTATACATGGCAACA+AGG | 0.579656 | 3.3:-15023170 | MS.gene057923:CDS |
CTTGAAGCATTTAAAGCACA+CGG | 0.583523 | 3.3:-15023018 | MS.gene057923:CDS |
TCCTGAAGGAAGATCATACA+TGG | 0.586107 | 3.3:-15022193 | MS.gene057923:CDS |
GGCTGCAACATGGCTATACA+TGG | 0.586171 | 3.3:-15023178 | MS.gene057923:CDS |
TCAGCTGCAATCTCAGTACC+AGG | 0.587163 | 3.3:+15023661 | None:intergenic |
TATATAGGATGAGCTAATGT+GGG | 0.588691 | 3.3:-15023199 | MS.gene057923:intron |
CCTGAATAGGAGCAGTAGAA+GGG | 0.590602 | 3.3:+15023319 | None:intergenic |
CCAACACAAGCTCACCATAG+AGG | 0.591866 | 3.3:-15022150 | MS.gene057923:CDS |
GATGTCAGGTCCACCAACAA+TGG | 0.594292 | 3.3:+15022023 | None:intergenic |
TATGTTAATTCCCTTGCAGT+CGG | 0.610815 | 3.3:-15021946 | MS.gene057923:CDS |
AGCTAATGTGGGCTGCAACA+TGG | 0.614595 | 3.3:-15023188 | MS.gene057923:CDS |
GAAGGAAGATCATACATGGT+AGG | 0.615068 | 3.3:-15022189 | MS.gene057923:CDS |
CAAGGGAGCCTATTACTAGG+AGG | 0.615815 | 3.3:+15024281 | None:intergenic |
TGCTAGAACACCGACTGCAA+GGG | 0.617282 | 3.3:+15021936 | None:intergenic |
GTAGTAACTGTGAATGCCAT+TGG | 0.617815 | 3.3:+15023910 | None:intergenic |
AAGGGAGCCTATTACTAGGA+GGG | 0.619110 | 3.3:+15024282 | None:intergenic |
AGTGAACAAGAAAGATGTGC+TGG | 0.624046 | 3.3:+15022805 | None:intergenic |
TGTGAAATATGGGCTACCAA+TGG | 0.631971 | 3.3:-15023926 | MS.gene057923:CDS |
GCTTGTAAGGACTATCAGGA+AGG | 0.637627 | 3.3:+15022974 | None:intergenic |
AGTAATAGGCTCCCTTGGAG+AGG | 0.643999 | 3.3:-15024275 | MS.gene057923:CDS |
ATTCAAAATGCCATTAGATG+GGG | 0.646428 | 3.3:-15023826 | MS.gene057923:CDS |
AGGGAATTAACATATGTGCA+AGG | 0.651111 | 3.3:+15021955 | None:intergenic |
AACAATGATGATCATCAACT+GGG | 0.657794 | 3.3:+15023743 | None:intergenic |
ATTGGGTCATCATTGCAACA+TGG | 0.666261 | 3.3:-15024412 | MS.gene057923:CDS |
TGAATAGGTTGACCTATCAG+GGG | 0.682641 | 3.3:-15023971 | MS.gene057923:intron |
TTGGAGAGGAGACTCAGCAG+TGG | 0.683745 | 3.3:-15024261 | MS.gene057923:CDS |
GAATAGGTTGACCTATCAGG+GGG | 0.686550 | 3.3:-15023970 | MS.gene057923:intron |
TTAATTGATAGTAACACACC+TGG | 0.700118 | 3.3:-15023679 | MS.gene057923:CDS |
GAACAAGAAAGATGTGCTGG+TGG | 0.714032 | 3.3:+15022808 | None:intergenic |
AAATCCACATGAGCTAACTG+GGG | 0.756843 | 3.3:-15022046 | MS.gene057923:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATAATGTATTTTTTTAAG+GGG | + | chr3.3:15023692-15023711 | None:intergenic | 10.0% |
!! | ATATTTAAATATGATTATGC+AGG | - | chr3.3:15023474-15023493 | MS.gene057923:intron | 15.0% |
!!! | TACATATAATCTATTTCTTT+GGG | + | chr3.3:15022572-15022591 | None:intergenic | 15.0% |
!!! | TTGATTTTATTGAATTGAAT+AGG | - | chr3.3:15022360-15022379 | MS.gene057923:intron | 15.0% |
!! | AAGAAATAGATTATATGTAG+AGG | - | chr3.3:15022573-15022592 | MS.gene057923:intron | 20.0% |
!! | ACGTACAAAATGAATAATTT+GGG | - | chr3.3:15022328-15022347 | MS.gene057923:intron | 20.0% |
!! | ACTAAGAGTGAATTAATATT+GGG | - | chr3.3:15023094-15023113 | MS.gene057923:intron | 20.0% |
!! | TAATTGGTATATTATTGTCT+AGG | + | chr3.3:15022838-15022857 | None:intergenic | 20.0% |
!! | TACGTACAAAATGAATAATT+TGG | - | chr3.3:15022327-15022346 | MS.gene057923:intron | 20.0% |
!!! | ATGAAATTGATCTTCAATTT+TGG | + | chr3.3:15022223-15022242 | None:intergenic | 20.0% |
!!! | CATTTTTCTTAACATGTAAT+TGG | + | chr3.3:15022854-15022873 | None:intergenic | 20.0% |
!!! | CTACATATAATCTATTTCTT+TGG | + | chr3.3:15022573-15022592 | None:intergenic | 20.0% |
!!! | GATAATTCAACTTTTTCTAA+TGG | - | chr3.3:15022269-15022288 | MS.gene057923:intron | 20.0% |
!!! | GGATAATAAAAGAGTATATT+GGG | - | chr3.3:15021917-15021936 | MS.gene057923:CDS | 20.0% |
!!! | TGGATAATAAAAGAGTATAT+TGG | - | chr3.3:15021916-15021935 | MS.gene057923:CDS | 20.0% |
!!! | TTATATACTTACTTGCATTT+TGG | + | chr3.3:15023652-15023671 | None:intergenic | 20.0% |
!!! | TTTGACCTTTTGATTATATT+TGG | + | chr3.3:15023586-15023605 | None:intergenic | 20.0% |
! | AAATGTACATGTAATTTACC+AGG | + | chr3.3:15023412-15023431 | None:intergenic | 25.0% |
! | AATAGATTATATGTAGAGGT+AGG | - | chr3.3:15022577-15022596 | MS.gene057923:intron | 25.0% |
! | ACTTGCCAAATATAATCAAA+AGG | - | chr3.3:15023578-15023597 | MS.gene057923:CDS | 25.0% |
! | ATAGACATATATAATCGTAG+AGG | - | chr3.3:15024022-15024041 | MS.gene057923:intron | 25.0% |
! | ATAGATTATATGTAGAGGTA+GGG | - | chr3.3:15022578-15022597 | MS.gene057923:intron | 25.0% |
! | ATATTCAAAATGCCATTAGA+TGG | - | chr3.3:15022518-15022537 | MS.gene057923:intron | 25.0% |
! | CACTAAGAGTGAATTAATAT+TGG | - | chr3.3:15023093-15023112 | MS.gene057923:intron | 25.0% |
! | TAAGGGTCAATTTAATTACA+AGG | - | chr3.3:15021989-15022008 | MS.gene057923:CDS | 25.0% |
! | TATAATCAAAAGGTCAAATG+TGG | - | chr3.3:15023588-15023607 | MS.gene057923:CDS | 25.0% |
! | TATTCAAAATGCCATTAGAT+GGG | - | chr3.3:15022519-15022538 | MS.gene057923:intron | 25.0% |
! | TTAAATATGATTATGCAGGT+GGG | - | chr3.3:15023478-15023497 | MS.gene057923:intron | 25.0% |
! | TTAATGTGATGCGTATATAT+AGG | - | chr3.3:15023132-15023151 | MS.gene057923:CDS | 25.0% |
! | TTTAAATATGATTATGCAGG+TGG | - | chr3.3:15023477-15023496 | MS.gene057923:intron | 25.0% |
! | TTTGTCTCTAAATATTAGTG+AGG | - | chr3.3:15022197-15022216 | MS.gene057923:CDS | 25.0% |
!! | TTTGAAGCAACAAATGAAAT+AGG | - | chr3.3:15022493-15022512 | MS.gene057923:intron | 25.0% |
!!! | AAACAGATGGATTACATATT+AGG | - | chr3.3:15024124-15024143 | MS.gene057923:intron | 25.0% |
!!! | AACAGATGGATTACATATTA+GGG | - | chr3.3:15024125-15024144 | MS.gene057923:intron | 25.0% |
!!! | ATACCAATTTTGCTTTATTG+AGG | + | chr3.3:15022780-15022799 | None:intergenic | 25.0% |
!!! | GTCAAATTAATTTGCTTGTA+AGG | + | chr3.3:15023388-15023407 | None:intergenic | 25.0% |
!!! | TTACATTTTGAAGGTCAAAA+AGG | - | chr3.3:15023304-15023323 | MS.gene057923:intron | 25.0% |
AAAATCTCTCATCTTCTTAG+AGG | - | chr3.3:15022022-15022041 | MS.gene057923:CDS | 30.0% | |
AACAATGATGATCATCAACT+GGG | + | chr3.3:15022606-15022625 | None:intergenic | 30.0% | |
ACATACATTATAGCCTGAAT+AGG | + | chr3.3:15023043-15023062 | None:intergenic | 30.0% | |
ACATCATACTACTACTACAT+CGG | + | chr3.3:15023863-15023882 | None:intergenic | 30.0% | |
AGCATATGTAATAGCAACTT+TGG | + | chr3.3:15024050-15024069 | None:intergenic | 30.0% | |
ATATATAGGATGAGCTAATG+TGG | - | chr3.3:15023146-15023165 | MS.gene057923:CDS | 30.0% | |
ATATTAGGGAAAAATCCTGA+AGG | - | chr3.3:15024139-15024158 | MS.gene057923:intron | 30.0% | |
ATATTCCCAACCAATACTAT+AGG | + | chr3.3:15022924-15022943 | None:intergenic | 30.0% | |
ATCAACATGCCTAAAAACAA+TGG | + | chr3.3:15022737-15022756 | None:intergenic | 30.0% | |
ATTAACATATGTGCAAGGTT+CGG | + | chr3.3:15024389-15024408 | None:intergenic | 30.0% | |
ATTCAAAATGCCATTAGATG+GGG | - | chr3.3:15022520-15022539 | MS.gene057923:intron | 30.0% | |
CACAGTTACTACATTATCAT+GGG | - | chr3.3:15022447-15022466 | MS.gene057923:intron | 30.0% | |
CACTCTTAGTGAATTAAGAA+AGG | + | chr3.3:15023084-15023103 | None:intergenic | 30.0% | |
GAATTGGCAAAATCTCATAA+AGG | - | chr3.3:15022985-15023004 | MS.gene057923:CDS | 30.0% | |
GTTGAAGTAACCTATAGTAT+TGG | - | chr3.3:15022911-15022930 | MS.gene057923:intron | 30.0% | |
TAACAAGTATCATGTTTCCT+TGG | + | chr3.3:15021971-15021990 | None:intergenic | 30.0% | |
TAGAGTGACTATCTAATACT+TGG | - | chr3.3:15024096-15024115 | MS.gene057923:intron | 30.0% | |
TAGATTATATGTAGAGGTAG+GGG | - | chr3.3:15022579-15022598 | MS.gene057923:intron | 30.0% | |
TATATAGGATGAGCTAATGT+GGG | - | chr3.3:15023147-15023166 | MS.gene057923:CDS | 30.0% | |
TCACAGTTACTACATTATCA+TGG | - | chr3.3:15022446-15022465 | MS.gene057923:intron | 30.0% | |
TCTCCTCAATAAAGCAAAAT+TGG | - | chr3.3:15022774-15022793 | MS.gene057923:CDS | 30.0% | |
! | AAGCAAATTAATTTGACTCC+TGG | - | chr3.3:15023391-15023410 | MS.gene057923:intron | 30.0% |
! | AGGAAACATGATACTTGTTA+AGG | - | chr3.3:15021971-15021990 | MS.gene057923:CDS | 30.0% |
! | AGTTGCTATTACATATGCTT+TGG | - | chr3.3:15024051-15024070 | MS.gene057923:intron | 30.0% |
! | ATTTATTTCTCCCAATTTCC+TGG | - | chr3.3:15022953-15022972 | MS.gene057923:intron | 30.0% |
! | CTCTTTGTCTTCATATTTTC+TGG | + | chr3.3:15022637-15022656 | None:intergenic | 30.0% |
! | GGAAACATGATACTTGTTAA+GGG | - | chr3.3:15021972-15021991 | MS.gene057923:CDS | 30.0% |
! | TCTTCGTTTGGTGATAAATT+TGG | + | chr3.3:15024232-15024251 | None:intergenic | 30.0% |
! | TTAATTGATAGTAACACACC+TGG | - | chr3.3:15022667-15022686 | MS.gene057923:intron | 30.0% |
! | TTTGTCTTCATATTTTCTGG+TGG | + | chr3.3:15022634-15022653 | None:intergenic | 30.0% |
!! | AAGTAACCTATAGTATTGGT+TGG | - | chr3.3:15022915-15022934 | MS.gene057923:intron | 30.0% |
!! | AGTAACCTATAGTATTGGTT+GGG | - | chr3.3:15022916-15022935 | MS.gene057923:intron | 30.0% |
!! | AGTTGATGATCATCATTGTT+GGG | - | chr3.3:15022606-15022625 | MS.gene057923:intron | 30.0% |
!! | ATTTTGCTTTATTGAGGAGA+CGG | + | chr3.3:15022774-15022793 | None:intergenic | 30.0% |
AGATCATACATGGTAGGATT+TGG | - | chr3.3:15024163-15024182 | MS.gene057923:intron | 35.0% | |
AGCACATGTTATAGCAACTT+TGG | + | chr3.3:15023987-15024006 | None:intergenic | 35.0% | |
AGCCATTTCTTAAAGCTTGT+GGG | + | chr3.3:15024265-15024284 | None:intergenic | 35.0% | |
AGGGAATTAACATATGTGCA+AGG | + | chr3.3:15024394-15024413 | None:intergenic | 35.0% | |
AGTTGCTATAACATGTGCTT+TGG | - | chr3.3:15023988-15024007 | MS.gene057923:intron | 35.0% | |
ATAATCTGTACCCCATCTAA+TGG | + | chr3.3:15022533-15022552 | None:intergenic | 35.0% | |
ATACTTGGATGGTAAACAGA+TGG | - | chr3.3:15024111-15024130 | MS.gene057923:intron | 35.0% | |
ATTTGCTTGTAAGGACTATC+AGG | + | chr3.3:15023379-15023398 | None:intergenic | 35.0% | |
CAACAATGATGATCATCAAC+TGG | + | chr3.3:15022607-15022626 | None:intergenic | 35.0% | |
CTGGAGACAATGTGAAATAT+GGG | - | chr3.3:15022410-15022429 | MS.gene057923:intron | 35.0% | |
CTTGAACTCCAGCATATTTA+AGG | + | chr3.3:15023270-15023289 | None:intergenic | 35.0% | |
GATCATACATGGTAGGATTT+GGG | - | chr3.3:15024164-15024183 | MS.gene057923:intron | 35.0% | |
GGGTTTATTCATATGAGAGA+TGG | - | chr3.3:15023498-15023517 | MS.gene057923:intron | 35.0% | |
GTGACTATCTAATACTTGGA+TGG | - | chr3.3:15024100-15024119 | MS.gene057923:intron | 35.0% | |
TAGCCATTTCTTAAAGCTTG+TGG | + | chr3.3:15024266-15024285 | None:intergenic | 35.0% | |
TAGTGTAGCAGAATTCAGTT+GGG | - | chr3.3:15023243-15023262 | MS.gene057923:intron | 35.0% | |
TATGTTAATTCCCTTGCAGT+CGG | - | chr3.3:15024400-15024419 | MS.gene057923:CDS | 35.0% | |
TCTCATAAAGGAACCTATGA+TGG | - | chr3.3:15022997-15023016 | MS.gene057923:CDS | 35.0% | |
TTTGGCAAAATCAAGGAGAT+GGG | + | chr3.3:15023634-15023653 | None:intergenic | 35.0% | |
! | ATTGAATAGGTTGACCTATC+AGG | - | chr3.3:15022373-15022392 | MS.gene057923:intron | 35.0% |
! | CTCACTCAGTTACATTTTGA+AGG | - | chr3.3:15023295-15023314 | MS.gene057923:intron | 35.0% |
! | CTTGAAGCATTTAAAGCACA+CGG | - | chr3.3:15023328-15023347 | MS.gene057923:CDS | 35.0% |
! | TTGAATAGGTTGACCTATCA+GGG | - | chr3.3:15022374-15022393 | MS.gene057923:intron | 35.0% |
! | TTTTGGCAAAATCAAGGAGA+TGG | + | chr3.3:15023635-15023654 | None:intergenic | 35.0% |
!! | CAGTTGATGATCATCATTGT+TGG | - | chr3.3:15022605-15022624 | MS.gene057923:intron | 35.0% |
!! | CTGCTTCTTCCATTGTTTTT+AGG | - | chr3.3:15022725-15022744 | MS.gene057923:CDS | 35.0% |
!! | CTTGCATTTTGGCAAAATCA+AGG | + | chr3.3:15023641-15023660 | None:intergenic | 35.0% |
AAATCCACATGAGCTAACTG+GGG | - | chr3.3:15024300-15024319 | MS.gene057923:CDS | 40.0% | |
ACCATGTATGATCTTCCTTC+AGG | + | chr3.3:15024157-15024176 | None:intergenic | 40.0% | |
AGTGAACAAGAAAGATGTGC+TGG | + | chr3.3:15023544-15023563 | None:intergenic | 40.0% | |
AGTTGGGACCTTAAATATGC+TGG | - | chr3.3:15023259-15023278 | MS.gene057923:intron | 40.0% | |
ATTGGGTCATCATTGCAACA+TGG | - | chr3.3:15021934-15021953 | MS.gene057923:CDS | 40.0% | |
CAAATCCACATGAGCTAACT+GGG | - | chr3.3:15024299-15024318 | MS.gene057923:CDS | 40.0% | |
CATCATAATATCCCCCTGAT+AGG | + | chr3.3:15022390-15022409 | None:intergenic | 40.0% | |
CTAGTGTAGCAGAATTCAGT+TGG | - | chr3.3:15023242-15023261 | MS.gene057923:intron | 40.0% | |
GAAGGAAGATCATACATGGT+AGG | - | chr3.3:15024157-15024176 | MS.gene057923:intron | 40.0% | |
GCTGGAGACAATGTGAAATA+TGG | - | chr3.3:15022409-15022428 | MS.gene057923:intron | 40.0% | |
GGACAGTTTATCTCTTCGTT+TGG | + | chr3.3:15024244-15024263 | None:intergenic | 40.0% | |
GTAGTAACTGTGAATGCCAT+TGG | + | chr3.3:15022439-15022458 | None:intergenic | 40.0% | |
TCCTGAAGGAAGATCATACA+TGG | - | chr3.3:15024153-15024172 | MS.gene057923:intron | 40.0% | |
TTGAACTTGTCGTTGATGTC+AGG | + | chr3.3:15024340-15024359 | None:intergenic | 40.0% | |
! | CTAGCAAAGCTTGCTTCTTT+GGG | - | chr3.3:15024427-15024446 | MS.gene057923:CDS | 40.0% |
! | TCTAGCAAAGCTTGCTTCTT+TGG | - | chr3.3:15024426-15024445 | MS.gene057923:CDS | 40.0% |
! | TGAATAGGTTGACCTATCAG+GGG | - | chr3.3:15022375-15022394 | MS.gene057923:intron | 40.0% |
! | TGTGAAATATGGGCTACCAA+TGG | - | chr3.3:15022420-15022439 | MS.gene057923:intron | 40.0% |
!! | GTCCCACAAGCTTTAAGAAA+TGG | - | chr3.3:15024260-15024279 | MS.gene057923:CDS | 40.0% |
AAGGGAGCCTATTACTAGGA+GGG | + | chr3.3:15022067-15022086 | None:intergenic | 45.0% | |
ACACCATACCACAATCGTAG+AGG | - | chr3.3:15023959-15023978 | MS.gene057923:CDS | 45.0% | |
AGCTGAAACTTCTGCTGCTA+TGG | - | chr3.3:15022702-15022721 | MS.gene057923:intron | 45.0% | |
CATGGCTATACATGGCAACA+AGG | - | chr3.3:15023176-15023195 | MS.gene057923:CDS | 45.0% | |
CCAAATCCACATGAGCTAAC+TGG | - | chr3.3:15024298-15024317 | MS.gene057923:CDS | 45.0% | |
CCAGTTAGCTCATGTGGATT+TGG | + | chr3.3:15024301-15024320 | None:intergenic | 45.0% | |
CCTGAATAGGAGCAGTAGAA+GGG | + | chr3.3:15023030-15023049 | None:intergenic | 45.0% | |
CGAAAAGCTGCCAGGAAATT+GGG | + | chr3.3:15022966-15022985 | None:intergenic | 45.0% | |
CTTTGGATCCTCTACGATTG+TGG | + | chr3.3:15023970-15023989 | None:intergenic | 45.0% | |
GAACAAGAAAGATGTGCTGG+TGG | + | chr3.3:15023541-15023560 | None:intergenic | 45.0% | |
GAAGGGACATTCTCCATCAT+AGG | + | chr3.3:15023013-15023032 | None:intergenic | 45.0% | |
GATCCTCTACGATTGTGGTA+TGG | + | chr3.3:15023965-15023984 | None:intergenic | 45.0% | |
GCTGGTGGCATATTGTGTAT+TGG | + | chr3.3:15023526-15023545 | None:intergenic | 45.0% | |
GCTTGTAAGGACTATCAGGA+AGG | + | chr3.3:15023375-15023394 | None:intergenic | 45.0% | |
GGAAACTCCCTCCTAGTAAT+AGG | - | chr3.3:15022057-15022076 | MS.gene057923:CDS | 45.0% | |
TCAGGGGGATATTATGATGC+TGG | - | chr3.3:15022391-15022410 | MS.gene057923:intron | 45.0% | |
TCGAAAAGCTGCCAGGAAAT+TGG | + | chr3.3:15022967-15022986 | None:intergenic | 45.0% | |
! | GAATAGGTTGACCTATCAGG+GGG | - | chr3.3:15022376-15022395 | MS.gene057923:intron | 45.0% |
! | TATGTGCAAGGTTCGGTCTT+AGG | + | chr3.3:15024382-15024401 | None:intergenic | 45.0% |
! | TCTTAGAGGCGCAAAGATCA+GGG | - | chr3.3:15022036-15022055 | MS.gene057923:CDS | 45.0% |
! | TGATGTTGCAGCTTTAGCGA+CGG | - | chr3.3:15023877-15023896 | MS.gene057923:CDS | 45.0% |
! | TTCCTGGCAGCTTTTCGAAT+TGG | - | chr3.3:15022969-15022988 | MS.gene057923:CDS | 45.0% |
! | TTCTTAGAGGCGCAAAGATC+AGG | - | chr3.3:15022035-15022054 | MS.gene057923:CDS | 45.0% |
!! | ACATGGCTTGCTTTGTTCCA+AGG | - | chr3.3:15021951-15021970 | MS.gene057923:CDS | 45.0% |
!!! | ATAAATAATGTATTTTTTTA+AGG | + | chr3.3:15023694-15023713 | None:intergenic | 5.0% |
!!! | TAAATAATGTATTTTTTTAA+GGG | + | chr3.3:15023693-15023712 | None:intergenic | 5.0% |
AGGAGACGGCGAGCATATTT+AGG | + | chr3.3:15022760-15022779 | None:intergenic | 50.0% | |
AGTAATAGGCTCCCTTGGAG+AGG | - | chr3.3:15022071-15022090 | MS.gene057923:CDS | 50.0% | |
CAAGGGAGCCTATTACTAGG+AGG | + | chr3.3:15022068-15022087 | None:intergenic | 50.0% | |
CCAACACAAGCTCACCATAG+AGG | - | chr3.3:15024196-15024215 | MS.gene057923:intron | 50.0% | |
CCCTTCTACTGCTCCTATTC+AGG | - | chr3.3:15023027-15023046 | MS.gene057923:CDS | 50.0% | |
CCTCTATGGTGAGCTTGTGT+TGG | + | chr3.3:15024199-15024218 | None:intergenic | 50.0% | |
CTATGGTGAGCTTGTGTTGG+TGG | + | chr3.3:15024196-15024215 | None:intergenic | 50.0% | |
CTCCAAGGGAGCCTATTACT+AGG | + | chr3.3:15022071-15022090 | None:intergenic | 50.0% | |
CTCCTAGTAATAGGCTCCCT+TGG | - | chr3.3:15022066-15022085 | MS.gene057923:CDS | 50.0% | |
GATGTCAGGTCCACCAACAA+TGG | + | chr3.3:15024326-15024345 | None:intergenic | 50.0% | |
GCCTGAATAGGAGCAGTAGA+AGG | + | chr3.3:15023031-15023050 | None:intergenic | 50.0% | |
GGCTGCAACATGGCTATACA+TGG | - | chr3.3:15023168-15023187 | MS.gene057923:CDS | 50.0% | |
TCAGCTGCAATCTCAGTACC+AGG | + | chr3.3:15022688-15022707 | None:intergenic | 50.0% | |
TGCCAATTCGAAAAGCTGCC+AGG | + | chr3.3:15022974-15022993 | None:intergenic | 50.0% | |
! | AGCTAATGTGGGCTGCAACA+TGG | - | chr3.3:15023158-15023177 | MS.gene057923:CDS | 50.0% |
! | TGCTAGAACACCGACTGCAA+GGG | + | chr3.3:15024413-15024432 | None:intergenic | 50.0% |
! | TTGCTAGAACACCGACTGCA+AGG | + | chr3.3:15024414-15024433 | None:intergenic | 50.0% |
! | TTGGCACTGAAGCACCTCTA+TGG | + | chr3.3:15024213-15024232 | None:intergenic | 50.0% |
ACTGCTGAGTCTCCTCTCCA+AGG | + | chr3.3:15022086-15022105 | None:intergenic | 55.0% | |
ATGGCCCCAGTTAGCTCATG+TGG | + | chr3.3:15024307-15024326 | None:intergenic | 55.0% | |
CTAACTGGGGCCATTGTTGG+TGG | - | chr3.3:15024313-15024332 | MS.gene057923:CDS | 55.0% | |
CTGCTGAGTCTCCTCTCCAA+GGG | + | chr3.3:15022085-15022104 | None:intergenic | 55.0% | |
GAGCTAACTGGGGCCATTGT+TGG | - | chr3.3:15024310-15024329 | MS.gene057923:CDS | 55.0% | |
GGAGACTCAGCAGTGGATGA+TGG | - | chr3.3:15022092-15022111 | MS.gene057923:CDS | 55.0% | |
TTGGAGAGGAGACTCAGCAG+TGG | - | chr3.3:15022085-15022104 | MS.gene057923:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 15021915 | 15024453 | 15021915 | ID=MS.gene057923 |
chr3.3 | mRNA | 15021915 | 15024453 | 15021915 | ID=MS.gene057923.t1;Parent=MS.gene057923 |
chr3.3 | exon | 15024241 | 15024453 | 15024241 | ID=MS.gene057923.t1.exon1;Parent=MS.gene057923.t1 |
chr3.3 | CDS | 15024241 | 15024453 | 15024241 | ID=cds.MS.gene057923.t1;Parent=MS.gene057923.t1 |
chr3.3 | exon | 15023803 | 15023986 | 15023803 | ID=MS.gene057923.t1.exon2;Parent=MS.gene057923.t1 |
chr3.3 | CDS | 15023803 | 15023986 | 15023803 | ID=cds.MS.gene057923.t1;Parent=MS.gene057923.t1 |
chr3.3 | exon | 15023573 | 15023769 | 15023573 | ID=MS.gene057923.t1.exon3;Parent=MS.gene057923.t1 |
chr3.3 | CDS | 15023573 | 15023769 | 15023573 | ID=cds.MS.gene057923.t1;Parent=MS.gene057923.t1 |
chr3.3 | exon | 15023312 | 15023389 | 15023312 | ID=MS.gene057923.t1.exon4;Parent=MS.gene057923.t1 |
chr3.3 | CDS | 15023312 | 15023389 | 15023312 | ID=cds.MS.gene057923.t1;Parent=MS.gene057923.t1 |
chr3.3 | exon | 15023109 | 15023214 | 15023109 | ID=MS.gene057923.t1.exon5;Parent=MS.gene057923.t1 |
chr3.3 | CDS | 15023109 | 15023214 | 15023109 | ID=cds.MS.gene057923.t1;Parent=MS.gene057923.t1 |
chr3.3 | exon | 15022956 | 15023078 | 15022956 | ID=MS.gene057923.t1.exon6;Parent=MS.gene057923.t1 |
chr3.3 | CDS | 15022956 | 15023078 | 15022956 | ID=cds.MS.gene057923.t1;Parent=MS.gene057923.t1 |
chr3.3 | exon | 15022709 | 15022872 | 15022709 | ID=MS.gene057923.t1.exon7;Parent=MS.gene057923.t1 |
chr3.3 | CDS | 15022709 | 15022872 | 15022709 | ID=cds.MS.gene057923.t1;Parent=MS.gene057923.t1 |
chr3.3 | exon | 15021915 | 15022238 | 15021915 | ID=MS.gene057923.t1.exon8;Parent=MS.gene057923.t1 |
chr3.3 | CDS | 15021915 | 15022238 | 15021915 | ID=cds.MS.gene057923.t1;Parent=MS.gene057923.t1 |
Gene Sequence |
Protein sequence |