Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057924.t1 | XP_013459054.1 | 92.8 | 483 | 13 | 3 | 1 | 461 | 1 | 483 | 1.00E-261 | 912.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057924.t1 | Q8VYG3 | 67.3 | 462 | 128 | 4 | 21 | 459 | 24 | 485 | 1.0e-182 | 641.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057924.t1 | A0A072UTZ1 | 92.8 | 483 | 13 | 3 | 1 | 461 | 1 | 483 | 7.3e-262 | 912.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057924.t1 | MTR_3g023740 | 92.754 | 483 | 13 | 3 | 1 | 461 | 1 | 483 | 0.0 | 923 |
MS.gene057924.t1 | MTR_3g105230 | 84.435 | 469 | 51 | 3 | 1 | 447 | 1 | 469 | 0.0 | 836 |
MS.gene057924.t1 | MTR_5g009970 | 47.357 | 454 | 214 | 6 | 29 | 457 | 40 | 493 | 2.06e-144 | 422 |
MS.gene057924.t1 | MTR_5g010000 | 46.696 | 454 | 217 | 5 | 29 | 457 | 39 | 492 | 3.63e-139 | 409 |
MS.gene057924.t1 | MTR_5g085730 | 42.084 | 499 | 250 | 8 | 1 | 460 | 1 | 499 | 1.24e-131 | 390 |
MS.gene057924.t1 | MTR_5g093590 | 43.312 | 471 | 228 | 5 | 29 | 460 | 33 | 503 | 2.08e-129 | 384 |
MS.gene057924.t1 | MTR_3g080190 | 43.096 | 478 | 234 | 6 | 22 | 461 | 32 | 509 | 2.43e-129 | 385 |
MS.gene057924.t1 | MTR_8g099410 | 43.923 | 469 | 225 | 7 | 27 | 458 | 25 | 492 | 2.10e-128 | 382 |
MS.gene057924.t1 | MTR_3g080810 | 43.913 | 460 | 221 | 8 | 30 | 455 | 35 | 491 | 4.76e-127 | 378 |
MS.gene057924.t1 | MTR_8g099410 | 43.923 | 469 | 225 | 7 | 27 | 458 | 25 | 492 | 6.45e-127 | 382 |
MS.gene057924.t1 | MTR_8g104820 | 43.290 | 462 | 223 | 10 | 30 | 455 | 30 | 488 | 6.46e-126 | 375 |
MS.gene057924.t1 | MTR_3g117500 | 43.384 | 461 | 224 | 8 | 30 | 455 | 24 | 482 | 4.70e-124 | 370 |
MS.gene057924.t1 | MTR_5g009970 | 45.894 | 414 | 199 | 6 | 69 | 457 | 6 | 419 | 1.97e-122 | 363 |
MS.gene057924.t1 | MTR_3g010330 | 42.457 | 464 | 235 | 5 | 25 | 458 | 20 | 481 | 4.18e-119 | 357 |
MS.gene057924.t1 | MTR_4g035955 | 42.795 | 458 | 225 | 7 | 29 | 455 | 13 | 464 | 4.02e-117 | 352 |
MS.gene057924.t1 | MTR_4g074960 | 41.365 | 469 | 236 | 8 | 29 | 459 | 27 | 494 | 2.26e-115 | 352 |
MS.gene057924.t1 | MTR_4g035975 | 42.217 | 469 | 228 | 11 | 30 | 459 | 27 | 491 | 1.54e-114 | 346 |
MS.gene057924.t1 | MTR_4g035930 | 40.529 | 454 | 241 | 4 | 29 | 455 | 14 | 465 | 1.98e-114 | 345 |
MS.gene057924.t1 | MTR_5g009970 | 44.388 | 392 | 193 | 6 | 91 | 457 | 1 | 392 | 3.21e-110 | 331 |
MS.gene057924.t1 | MTR_1g037340 | 42.174 | 460 | 233 | 6 | 30 | 458 | 25 | 482 | 3.58e-110 | 334 |
MS.gene057924.t1 | MTR_1g088190 | 41.685 | 463 | 214 | 9 | 30 | 458 | 39 | 479 | 2.71e-109 | 332 |
MS.gene057924.t1 | MTR_3g113720 | 38.248 | 468 | 245 | 8 | 31 | 459 | 58 | 520 | 1.31e-105 | 324 |
MS.gene057924.t1 | MTR_8g075990 | 37.607 | 468 | 248 | 9 | 31 | 459 | 64 | 526 | 1.60e-92 | 290 |
MS.gene057924.t1 | MTR_5g009970 | 45.062 | 324 | 164 | 4 | 148 | 457 | 1 | 324 | 3.06e-88 | 273 |
MS.gene057924.t1 | MTR_2g028480 | 36.253 | 491 | 241 | 14 | 30 | 460 | 111 | 589 | 1.24e-81 | 264 |
MS.gene057924.t1 | MTR_3g090540 | 32.692 | 520 | 271 | 15 | 8 | 460 | 76 | 583 | 7.49e-78 | 254 |
MS.gene057924.t1 | MTR_3g082440 | 35.845 | 491 | 240 | 18 | 30 | 460 | 116 | 591 | 5.90e-74 | 244 |
MS.gene057924.t1 | MTR_1g088190 | 40.461 | 304 | 127 | 7 | 30 | 300 | 39 | 321 | 7.74e-59 | 197 |
MS.gene057924.t1 | MTR_1g111340 | 50.909 | 165 | 36 | 4 | 236 | 389 | 1 | 131 | 2.99e-39 | 138 |
MS.gene057924.t1 | MTR_7g108925 | 43.709 | 151 | 83 | 2 | 309 | 458 | 50 | 199 | 3.93e-36 | 133 |
MS.gene057924.t1 | MTR_4g128810 | 27.123 | 424 | 199 | 15 | 43 | 460 | 14 | 333 | 8.47e-31 | 122 |
MS.gene057924.t1 | MTR_1g037320 | 39.583 | 192 | 99 | 4 | 91 | 266 | 1 | 191 | 1.25e-26 | 109 |
MS.gene057924.t1 | MTR_1g037320 | 42.623 | 122 | 68 | 2 | 335 | 455 | 169 | 289 | 4.46e-24 | 102 |
MS.gene057924.t1 | MTR_0393s0050 | 43.846 | 130 | 72 | 1 | 308 | 436 | 26 | 155 | 4.97e-26 | 104 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057924.t1 | AT3G43860 | 66.176 | 476 | 136 | 5 | 9 | 459 | 10 | 485 | 0.0 | 632 |
MS.gene057924.t1 | AT3G43860 | 66.176 | 476 | 136 | 5 | 9 | 459 | 10 | 485 | 0.0 | 632 |
MS.gene057924.t1 | AT4G23560 | 46.916 | 454 | 215 | 6 | 31 | 459 | 24 | 476 | 2.37e-133 | 393 |
MS.gene057924.t1 | AT4G11050 | 45.396 | 467 | 217 | 7 | 30 | 459 | 26 | 491 | 4.18e-133 | 395 |
MS.gene057924.t1 | AT4G11050 | 45.396 | 467 | 217 | 7 | 30 | 459 | 26 | 491 | 1.77e-132 | 396 |
MS.gene057924.t1 | AT4G11050 | 45.396 | 467 | 217 | 7 | 30 | 459 | 26 | 491 | 1.93e-132 | 396 |
MS.gene057924.t1 | AT4G09740 | 46.272 | 456 | 219 | 6 | 29 | 459 | 22 | 476 | 1.09e-131 | 389 |
MS.gene057924.t1 | AT4G02290 | 44.805 | 462 | 219 | 8 | 30 | 458 | 52 | 510 | 5.44e-127 | 378 |
MS.gene057924.t1 | AT1G64390 | 44.325 | 467 | 222 | 7 | 30 | 459 | 25 | 490 | 6.42e-127 | 382 |
MS.gene057924.t1 | AT2G32990 | 43.590 | 468 | 226 | 6 | 27 | 456 | 36 | 503 | 1.16e-126 | 378 |
MS.gene057924.t1 | AT1G02800 | 45.022 | 462 | 216 | 9 | 30 | 458 | 43 | 499 | 2.08e-124 | 371 |
MS.gene057924.t1 | AT1G70710 | 43.534 | 464 | 224 | 10 | 30 | 459 | 28 | 487 | 3.86e-124 | 370 |
MS.gene057924.t1 | AT1G23210 | 42.672 | 464 | 228 | 10 | 30 | 459 | 28 | 487 | 3.02e-121 | 363 |
MS.gene057924.t1 | AT1G71380 | 42.609 | 460 | 231 | 7 | 30 | 459 | 24 | 480 | 9.26e-118 | 353 |
MS.gene057924.t1 | AT1G22880 | 42.391 | 460 | 232 | 7 | 30 | 459 | 24 | 480 | 2.22e-117 | 353 |
MS.gene057924.t1 | AT4G39010 | 40.385 | 468 | 241 | 8 | 28 | 459 | 27 | 492 | 4.44e-115 | 347 |
MS.gene057924.t1 | AT2G44550 | 41.575 | 457 | 234 | 7 | 30 | 455 | 33 | 487 | 9.27e-113 | 341 |
MS.gene057924.t1 | AT2G44540 | 40.851 | 470 | 242 | 8 | 22 | 457 | 23 | 490 | 3.64e-111 | 337 |
MS.gene057924.t1 | AT1G19940 | 42.140 | 458 | 225 | 9 | 30 | 452 | 48 | 500 | 1.08e-110 | 337 |
MS.gene057924.t1 | AT1G19940 | 42.140 | 458 | 225 | 9 | 30 | 452 | 48 | 500 | 1.08e-110 | 337 |
MS.gene057924.t1 | AT2G44560 | 39.796 | 490 | 259 | 8 | 1 | 458 | 6 | 491 | 5.09e-108 | 329 |
MS.gene057924.t1 | AT2G44570 | 41.328 | 467 | 239 | 8 | 25 | 458 | 28 | 492 | 1.04e-107 | 328 |
MS.gene057924.t1 | AT1G48930 | 41.290 | 465 | 235 | 7 | 29 | 456 | 29 | 492 | 2.97e-107 | 331 |
MS.gene057924.t1 | AT4G39000 | 38.065 | 465 | 252 | 5 | 30 | 459 | 25 | 488 | 4.84e-104 | 319 |
MS.gene057924.t1 | AT1G75680 | 41.319 | 455 | 223 | 10 | 31 | 448 | 58 | 505 | 9.65e-103 | 317 |
MS.gene057924.t1 | AT4G38990 | 38.380 | 469 | 242 | 10 | 30 | 455 | 23 | 487 | 1.66e-99 | 307 |
MS.gene057924.t1 | AT4G02290 | 41.687 | 403 | 195 | 9 | 91 | 458 | 1 | 398 | 8.64e-94 | 289 |
MS.gene057924.t1 | AT1G22880 | 39.850 | 399 | 207 | 7 | 91 | 459 | 1 | 396 | 2.55e-90 | 280 |
MS.gene057924.t1 | AT4G39010 | 38.043 | 368 | 192 | 6 | 24 | 356 | 23 | 389 | 6.95e-86 | 268 |
MS.gene057924.t1 | AT5G49720 | 36.253 | 491 | 241 | 15 | 30 | 460 | 108 | 586 | 4.97e-80 | 260 |
MS.gene057924.t1 | AT1G19940 | 39.779 | 362 | 180 | 7 | 30 | 355 | 48 | 407 | 1.53e-76 | 245 |
MS.gene057924.t1 | AT2G44570 | 39.945 | 363 | 184 | 7 | 25 | 355 | 28 | 388 | 2.88e-73 | 236 |
MS.gene057924.t1 | AT4G24260 | 35.772 | 492 | 242 | 16 | 30 | 460 | 108 | 586 | 2.62e-72 | 240 |
MS.gene057924.t1 | AT1G65610 | 36.382 | 492 | 235 | 18 | 30 | 460 | 116 | 590 | 4.46e-72 | 239 |
MS.gene057924.t1 | AT1G22880 | 43.333 | 300 | 139 | 5 | 30 | 300 | 24 | 321 | 4.05e-70 | 226 |
MS.gene057924.t1 | AT4G38990 | 36.036 | 333 | 166 | 6 | 30 | 334 | 23 | 336 | 1.27e-58 | 196 |
MS.gene057924.t1 | AT4G24260 | 33.075 | 387 | 192 | 12 | 30 | 355 | 108 | 488 | 1.02e-41 | 155 |
MS.gene057924.t1 | AT4G24260 | 37.308 | 260 | 124 | 8 | 30 | 257 | 108 | 360 | 3.46e-38 | 144 |
Find 107 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCATACTTACTTGCATTT+TGG | 0.192335 | 3.3:+15016713 | None:intergenic |
TCTAGCAAAGCTTGCTTCTT+TGG | 0.193643 | 3.3:-15015947 | MS.gene057924:CDS |
TCTTCGTTTGGTGACAAATT+TGG | 0.202470 | 3.3:+15016144 | None:intergenic |
AAACAGATGGATTACATATT+AGG | 0.203643 | 3.3:-15016249 | MS.gene057924:intron |
GGAAACTCCCTCCCAATAAT+AGG | 0.247610 | 3.3:-15018286 | MS.gene057924:CDS |
TCTCCAAGGGACCCTATTAT+TGG | 0.258473 | 3.3:+15018274 | None:intergenic |
ATTGAATAGGTTGACCTATC+AGG | 0.261586 | 3.3:-15017966 | MS.gene057924:intron |
TCTCCTCAATAAAGCAAAAT+TGG | 0.261612 | 3.3:-15017565 | MS.gene057924:intron |
AGGAGACGGCGAGCATATTT+AGG | 0.264621 | 3.3:+15017582 | None:intergenic |
CCAAATCCACATGAGCTAAC+TGG | 0.270045 | 3.3:-15016075 | MS.gene057924:CDS |
CTAGCAAAGCTTGCTTCTTT+GGG | 0.289529 | 3.3:-15015946 | MS.gene057924:CDS |
AGATCATACATGGTAGGATT+TGG | 0.292392 | 3.3:-15016210 | MS.gene057924:CDS |
TGGATAATAAAAGAGTATAT+TGG | 0.293882 | 3.3:-15018427 | MS.gene057924:CDS |
GCTGGAGACAATGTGAAATA+TGG | 0.300456 | 3.3:-15017930 | MS.gene057924:CDS |
CCCTTCTACTGCTCCTATTC+AGG | 0.300909 | 3.3:-15017332 | MS.gene057924:CDS |
CCAGTTAGCTCATGTGGATT+TGG | 0.301161 | 3.3:+15016075 | None:intergenic |
ATTTGAATCAACAAATGAAA+TGG | 0.338484 | 3.3:-15017847 | MS.gene057924:CDS |
ATTTGCTTGTAAGGACTATC+AGG | 0.344561 | 3.3:+15016986 | None:intergenic |
AACAGATGGATTACATATTA+GGG | 0.358207 | 3.3:-15016248 | MS.gene057924:intron |
GTCAAATTGATTTGCTTGTA+AGG | 0.358875 | 3.3:+15016977 | None:intergenic |
ACCATGTATGATCTTCCTTC+AGG | 0.359145 | 3.3:+15016219 | None:intergenic |
AAAATCTCTCATCTTCTTAG+AGG | 0.368360 | 3.3:-15018321 | MS.gene057924:CDS |
GCCTGAATAGGAGCAGTAGA+AGG | 0.378778 | 3.3:+15017331 | None:intergenic |
AGGAAACATGATACTTGTTA+AGG | 0.381146 | 3.3:-15018372 | MS.gene057924:CDS |
GTCCCACAAGCTTTAAGAAA+TGG | 0.381892 | 3.3:-15016113 | MS.gene057924:CDS |
GGATAATAAAAGAGTATATT+GGG | 0.382943 | 3.3:-15018426 | MS.gene057924:CDS |
ATATTCAAAATGCCATTAGA+TGG | 0.385203 | 3.3:-15017821 | MS.gene057924:CDS |
CAACAATGATGATCATCAAC+TGG | 0.390024 | 3.3:+15017735 | None:intergenic |
TTCTTAGAGGCACAAAGATC+AGG | 0.391595 | 3.3:-15018308 | MS.gene057924:CDS |
GGACAATTTATCTCTTCGTT+TGG | 0.393229 | 3.3:+15016132 | None:intergenic |
TTGGCACTGAAGCACCTCTA+TGG | 0.398776 | 3.3:+15016163 | None:intergenic |
GATCATACATGGTAGGATTT+GGG | 0.403815 | 3.3:-15016209 | MS.gene057924:CDS |
TATGTGCAAGGTTCGGTCTT+AGG | 0.410154 | 3.3:+15015994 | None:intergenic |
CAAATCCACATGAGCTAACT+GGG | 0.410353 | 3.3:-15016074 | MS.gene057924:CDS |
CTCCAAGGGACCCTATTATT+GGG | 0.421960 | 3.3:+15018275 | None:intergenic |
CTATGGTGAGCTTGTGTTGG+TGG | 0.424826 | 3.3:+15016180 | None:intergenic |
GAATTGGCAAAATCTCATAA+AGG | 0.424938 | 3.3:-15017374 | MS.gene057924:CDS |
TCACAGTTACTACATTATCA+TGG | 0.429191 | 3.3:-15017893 | MS.gene057924:CDS |
ATAATCTGTACCCCATCTAA+TGG | 0.430183 | 3.3:+15017809 | None:intergenic |
AGCTGAAACTTCTGCTGCTA+TGG | 0.438179 | 3.3:-15017637 | MS.gene057924:CDS |
TAGCCATTTCTTAAAGCTTG+TGG | 0.441135 | 3.3:+15016110 | None:intergenic |
TAACAAGTATCATGTTTCCT+TGG | 0.445707 | 3.3:+15018375 | None:intergenic |
ACATACATTATAGCCTGAAT+AGG | 0.446803 | 3.3:+15017319 | None:intergenic |
TTGAACTTGTCGTTGATGTC+AGG | 0.451159 | 3.3:+15016036 | None:intergenic |
GAAACTCCCTCCCAATAATA+GGG | 0.459252 | 3.3:-15018285 | MS.gene057924:CDS |
TTTGAATCAACAAATGAAAT+GGG | 0.459589 | 3.3:-15017846 | MS.gene057924:CDS |
TCTCATAAAGGAACCTATGA+TGG | 0.468029 | 3.3:-15017362 | MS.gene057924:CDS |
CTCCCAATAATAGGGTCCCT+TGG | 0.468192 | 3.3:-15018277 | MS.gene057924:CDS |
GGAAACATGATACTTGTTAA+GGG | 0.470689 | 3.3:-15018371 | MS.gene057924:CDS |
GGAGACTCAGCAATGGATGA+TGG | 0.473201 | 3.3:-15018251 | MS.gene057924:CDS |
ACATGGCTTGCTTTGTTCCA+AGG | 0.473298 | 3.3:-15018392 | MS.gene057924:CDS |
AGCCATTTCTTAAAGCTTGT+GGG | 0.474167 | 3.3:+15016111 | None:intergenic |
ACTTGCCAAATATAATCAAA+AGG | 0.476084 | 3.3:-15016784 | MS.gene057924:CDS |
TTGAATAGGTTGACCTATCA+GGG | 0.476637 | 3.3:-15017965 | MS.gene057924:intron |
GAGCTAACTGGGGCCATTGT+TGG | 0.483453 | 3.3:-15016063 | MS.gene057924:CDS |
AGTTGATGATCATCATTGTT+GGG | 0.484523 | 3.3:-15017733 | MS.gene057924:CDS |
GAAGGGACATTCTCCATCAT+AGG | 0.487500 | 3.3:+15017349 | None:intergenic |
TATTCAAAATGCCATTAGAT+GGG | 0.489997 | 3.3:-15017820 | MS.gene057924:CDS |
AAGCAAATCAATTTGACTCC+TGG | 0.494274 | 3.3:-15016971 | MS.gene057924:intron |
CAGTTGATGATCATCATTGT+TGG | 0.497946 | 3.3:-15017734 | MS.gene057924:CDS |
TGCTAGAACACCGGCTGCAA+GGG | 0.505101 | 3.3:+15015963 | None:intergenic |
TAAGGGTCAATTTAATTACA+AGG | 0.517252 | 3.3:-15018354 | MS.gene057924:CDS |
TTGCTGAGTCTCCTCTCCAA+GGG | 0.521853 | 3.3:+15018261 | None:intergenic |
CACAGTTACTACATTATCAT+GGG | 0.527654 | 3.3:-15017892 | MS.gene057924:CDS |
ATTAACATATGTGCAAGGTT+CGG | 0.528389 | 3.3:+15015987 | None:intergenic |
CCTCTATGGTGAGCTTGTGT+TGG | 0.530222 | 3.3:+15016177 | None:intergenic |
TTGCTAGAACACCGGCTGCA+AGG | 0.530745 | 3.3:+15015962 | None:intergenic |
ATGTATAGGATGAGCTAATG+TGG | 0.532805 | 3.3:-15017213 | MS.gene057924:intron |
CTAACTGGGGCCATTGTTGG+TGG | 0.545679 | 3.3:-15016060 | MS.gene057924:CDS |
GCTGGTGGCATATTGTGTAT+TGG | 0.548328 | 3.3:+15016839 | None:intergenic |
TTTGGCAAAATCAAGGAGAT+GGG | 0.548916 | 3.3:+15016731 | None:intergenic |
CTGGAGACAATGTGAAATAT+GGG | 0.550838 | 3.3:-15017929 | MS.gene057924:CDS |
TATGTTAATTCCCTTGCAGC+CGG | 0.552392 | 3.3:-15015973 | MS.gene057924:CDS |
ATTGCTGAGTCTCCTCTCCA+AGG | 0.554564 | 3.3:+15018260 | None:intergenic |
ATGGCCCCAGTTAGCTCATG+TGG | 0.556380 | 3.3:+15016069 | None:intergenic |
AGCAAGCTTTGCTAGAACAC+CGG | 0.556441 | 3.3:+15015954 | None:intergenic |
GGGTTTATTCATATGAGAGA+TGG | 0.573447 | 3.3:-15016864 | MS.gene057924:CDS |
TATAATCAAAAGGTCAAATG+TGG | 0.574640 | 3.3:-15016774 | MS.gene057924:CDS |
TCTTAGAGGCACAAAGATCA+GGG | 0.576198 | 3.3:-15018307 | MS.gene057924:CDS |
CATGGCTATACATGGCAACA+AGG | 0.579656 | 3.3:-15017183 | MS.gene057924:CDS |
CTTGAAGCATTTAAAGCACA+CGG | 0.583523 | 3.3:-15017034 | MS.gene057924:CDS |
TCCTGAAGGAAGATCATACA+TGG | 0.586107 | 3.3:-15016220 | MS.gene057924:CDS |
GGCTGCAACATGGCTATACA+TGG | 0.586171 | 3.3:-15017191 | MS.gene057924:CDS |
TCAGCTGCAATCTCAGTACC+AGG | 0.587163 | 3.3:+15017654 | None:intergenic |
CCTGAATAGGAGCAGTAGAA+GGG | 0.590602 | 3.3:+15017332 | None:intergenic |
CCAACACAAGCTCACCATAG+AGG | 0.591866 | 3.3:-15016177 | MS.gene057924:CDS |
GATGTCAGGTCCACCAACAA+TGG | 0.594292 | 3.3:+15016050 | None:intergenic |
AGCTAATGTGGGCTGCAACA+TGG | 0.614595 | 3.3:-15017201 | MS.gene057924:CDS |
GAAGGAAGATCATACATGGT+AGG | 0.615068 | 3.3:-15016216 | MS.gene057924:CDS |
GTAGTAACTGTGAATGCCAT+TGG | 0.617815 | 3.3:+15017903 | None:intergenic |
AAGGGACCCTATTATTGGGA+GGG | 0.618747 | 3.3:+15018279 | None:intergenic |
AGTGAACAAGAAAGATGTGC+TGG | 0.624046 | 3.3:+15016821 | None:intergenic |
AATAATAGGGTCCCTTGGAG+AGG | 0.629528 | 3.3:-15018272 | MS.gene057924:CDS |
CAAGGGACCCTATTATTGGG+AGG | 0.629896 | 3.3:+15018278 | None:intergenic |
TGTGAAATATGGGCTACCAA+TGG | 0.631971 | 3.3:-15017919 | MS.gene057924:CDS |
GCTTGTAAGGACTATCAGGA+AGG | 0.637627 | 3.3:+15016990 | None:intergenic |
TGTATAGGATGAGCTAATGT+GGG | 0.640123 | 3.3:-15017212 | MS.gene057924:intron |
TTGGAGAGGAGACTCAGCAA+TGG | 0.645168 | 3.3:-15018258 | MS.gene057924:CDS |
ATTCAAAATGCCATTAGATG+GGG | 0.646428 | 3.3:-15017819 | MS.gene057924:CDS |
AGGGAATTAACATATGTGCA+AGG | 0.651111 | 3.3:+15015982 | None:intergenic |
AACAATGATGATCATCAACT+GGG | 0.657794 | 3.3:+15017736 | None:intergenic |
ATTGGGTCATCATTGCAACA+TGG | 0.666261 | 3.3:-15018409 | MS.gene057924:CDS |
TGAATAGGTTGACCTATCAG+GGG | 0.682641 | 3.3:-15017964 | MS.gene057924:intron |
GAATAGGTTGACCTATCAGG+GGG | 0.686550 | 3.3:-15017963 | MS.gene057924:intron |
TTAATTGATAGTAACACACC+TGG | 0.700118 | 3.3:-15017672 | MS.gene057924:CDS |
GAACAAGAAAGATGTGCTGG+TGG | 0.714032 | 3.3:+15016824 | None:intergenic |
AAATCCACATGAGCTAACTG+GGG | 0.756843 | 3.3:-15016073 | MS.gene057924:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATAATGTATTTTTTTAAG+GGG | + | chr3.3:15017693-15017712 | None:intergenic | 10.0% |
!! | ATATTTAAATATGATTATGC+AGG | - | chr3.3:15017482-15017501 | MS.gene057924:intron | 15.0% |
!!! | TACATATAATCTATTTCTTT+GGG | + | chr3.3:15016603-15016622 | None:intergenic | 15.0% |
!!! | TTGATTTTATTGAATTGAAT+AGG | - | chr3.3:15016391-15016410 | MS.gene057924:intron | 15.0% |
!! | AAGAAATAGATTATATGTAG+AGG | - | chr3.3:15016604-15016623 | MS.gene057924:intron | 20.0% |
!! | ACGTAGAAAATGAATAATTT+GGG | - | chr3.3:15016359-15016378 | MS.gene057924:intron | 20.0% |
!! | ACTAAGAGTGAATTAATATT+GGG | - | chr3.3:15017105-15017124 | MS.gene057924:intron | 20.0% |
!! | ATAAACATATATAATCGTAG+AGG | - | chr3.3:15018019-15018038 | MS.gene057924:intron | 20.0% |
!! | ATGTAATTGGTATATTGTTT+AGG | + | chr3.3:15016868-15016887 | None:intergenic | 20.0% |
!! | ATTGTTTAGGCTTAAATATA+AGG | + | chr3.3:15016855-15016874 | None:intergenic | 20.0% |
!! | ATTTGAATCAACAAATGAAA+TGG | - | chr3.3:15016523-15016542 | MS.gene057924:intron | 20.0% |
!! | CTCAAAACAAAATCATTATT+AGG | - | chr3.3:15016169-15016188 | MS.gene057924:CDS | 20.0% |
!! | TACGTAGAAAATGAATAATT+TGG | - | chr3.3:15016358-15016377 | MS.gene057924:intron | 20.0% |
!! | TTTGAATCAACAAATGAAAT+GGG | - | chr3.3:15016524-15016543 | MS.gene057924:intron | 20.0% |
!!! | ATGAAATTGATCTTCAATTT+TGG | + | chr3.3:15016254-15016273 | None:intergenic | 20.0% |
!!! | CTACATATAATCTATTTCTT+TGG | + | chr3.3:15016604-15016623 | None:intergenic | 20.0% |
!!! | GATAATTCAACTTTTTCTAA+CGG | - | chr3.3:15016300-15016319 | MS.gene057924:intron | 20.0% |
!!! | GGATAATAAAAGAGTATATT+GGG | - | chr3.3:15015944-15015963 | MS.gene057924:CDS | 20.0% |
!!! | TGGATAATAAAAGAGTATAT+TGG | - | chr3.3:15015943-15015962 | MS.gene057924:CDS | 20.0% |
!!! | TTTGACCTTTTGATTATATT+TGG | + | chr3.3:15017594-15017613 | None:intergenic | 20.0% |
! | AAATGTACATGTAATTTACC+AGG | + | chr3.3:15017420-15017439 | None:intergenic | 25.0% |
! | AATAGATTATATGTAGAGGT+AGG | - | chr3.3:15016608-15016627 | MS.gene057924:intron | 25.0% |
! | ACTTGCCAAATATAATCAAA+AGG | - | chr3.3:15017586-15017605 | MS.gene057924:CDS | 25.0% |
! | ATAGATTATATGTAGAGGTA+GGG | - | chr3.3:15016609-15016628 | MS.gene057924:intron | 25.0% |
! | ATATTCAAAATGCCATTAGA+TGG | - | chr3.3:15016549-15016568 | MS.gene057924:intron | 25.0% |
! | ATTGAAGTAACCTATTGTAT+TGG | - | chr3.3:15016922-15016941 | MS.gene057924:intron | 25.0% |
! | CACTAAGAGTGAATTAATAT+TGG | - | chr3.3:15017104-15017123 | MS.gene057924:intron | 25.0% |
! | TAAGGGTCAATTTAATTACA+AGG | - | chr3.3:15016016-15016035 | MS.gene057924:CDS | 25.0% |
! | TATAATCAAAAGGTCAAATG+TGG | - | chr3.3:15017596-15017615 | MS.gene057924:CDS | 25.0% |
! | TATATATTATCAAGCAGACT+TGG | - | chr3.3:15017729-15017748 | MS.gene057924:CDS | 25.0% |
! | TATTCAAAATGCCATTAGAT+GGG | - | chr3.3:15016550-15016569 | MS.gene057924:intron | 25.0% |
! | TTAAATATGATTATGCAGGT+GGG | - | chr3.3:15017486-15017505 | MS.gene057924:intron | 25.0% |
! | TTAATGTGATGCATATGTAT+AGG | - | chr3.3:15017143-15017162 | MS.gene057924:CDS | 25.0% |
! | TTTAAATATGATTATGCAGG+TGG | - | chr3.3:15017485-15017504 | MS.gene057924:intron | 25.0% |
! | TTTGTCTCTAAATATTAGTG+AGG | - | chr3.3:15016228-15016247 | MS.gene057924:CDS | 25.0% |
!! | CAGTTTTCTATACATGTAAT+TGG | + | chr3.3:15016881-15016900 | None:intergenic | 25.0% |
!!! | AAACAGATGGATTACATATT+AGG | - | chr3.3:15018121-15018140 | MS.gene057924:intron | 25.0% |
!!! | AACAGATGGATTACATATTA+GGG | - | chr3.3:15018122-15018141 | MS.gene057924:intron | 25.0% |
!!! | ATACCAATTTTGCTTTATTG+AGG | + | chr3.3:15016811-15016830 | None:intergenic | 25.0% |
!!! | TTACATTTTGAAGGTCAAAA+AGG | - | chr3.3:15017312-15017331 | MS.gene057924:intron | 25.0% |
AAAATCTCTCATCTTCTTAG+AGG | - | chr3.3:15016049-15016068 | MS.gene057924:CDS | 30.0% | |
AACAATGATGATCATCAACT+GGG | + | chr3.3:15016637-15016656 | None:intergenic | 30.0% | |
ACATACATTATAGCCTGAAT+AGG | + | chr3.3:15017054-15017073 | None:intergenic | 30.0% | |
AGCATATGTAATAGCAACTT+TGG | + | chr3.3:15018047-15018066 | None:intergenic | 30.0% | |
AGTTGCTATAACATGTGATT+TGG | - | chr3.3:15017985-15018004 | MS.gene057924:intron | 30.0% | |
ATATTAGGGAAAAATCCTGA+AGG | - | chr3.3:15018136-15018155 | MS.gene057924:intron | 30.0% | |
ATATTCCCAACCAATACAAT+AGG | + | chr3.3:15016935-15016954 | None:intergenic | 30.0% | |
ATCAACATGCCTAAAAACAA+TGG | + | chr3.3:15016768-15016787 | None:intergenic | 30.0% | |
ATCACATGTTATAGCAACTT+TGG | + | chr3.3:15017984-15018003 | None:intergenic | 30.0% | |
ATTAACATATGTGCAAGGTT+CGG | + | chr3.3:15018386-15018405 | None:intergenic | 30.0% | |
ATTCAAAATGCCATTAGATG+GGG | - | chr3.3:15016551-15016570 | MS.gene057924:intron | 30.0% | |
CACAGTTACTACATTATCAT+GGG | - | chr3.3:15016478-15016497 | MS.gene057924:intron | 30.0% | |
CACTCTTAGTGAATTAAGAA+AGG | + | chr3.3:15017095-15017114 | None:intergenic | 30.0% | |
GAATTGGCAAAATCTCATAA+AGG | - | chr3.3:15016996-15017015 | MS.gene057924:CDS | 30.0% | |
TAACAAGTATCATGTTTCCT+TGG | + | chr3.3:15015998-15016017 | None:intergenic | 30.0% | |
TAGAGTGACTATCTAATACT+TGG | - | chr3.3:15018093-15018112 | MS.gene057924:intron | 30.0% | |
TAGATTATATGTAGAGGTAG+GGG | - | chr3.3:15016610-15016629 | MS.gene057924:intron | 30.0% | |
TCACAGTTACTACATTATCA+TGG | - | chr3.3:15016477-15016496 | MS.gene057924:intron | 30.0% | |
TCTCCTCAATAAAGCAAAAT+TGG | - | chr3.3:15016805-15016824 | MS.gene057924:CDS | 30.0% | |
! | AAGTAACCTATTGTATTGGT+TGG | - | chr3.3:15016926-15016945 | MS.gene057924:intron | 30.0% |
! | AGGAAACATGATACTTGTTA+AGG | - | chr3.3:15015998-15016017 | MS.gene057924:CDS | 30.0% |
! | AGTTGCTATTACATATGCTT+TGG | - | chr3.3:15018048-15018067 | MS.gene057924:intron | 30.0% |
! | CTCTTTGTCTTCATATTTTC+TGG | + | chr3.3:15016668-15016687 | None:intergenic | 30.0% |
! | GGAAACATGATACTTGTTAA+GGG | - | chr3.3:15015999-15016018 | MS.gene057924:CDS | 30.0% |
! | TTAATTGATAGTAACACACC+TGG | - | chr3.3:15016698-15016717 | MS.gene057924:intron | 30.0% |
! | TTGCATACTTACTTGCATTT+TGG | + | chr3.3:15017660-15017679 | None:intergenic | 30.0% |
! | TTTGTCTTCATATTTTCTGG+TGG | + | chr3.3:15016665-15016684 | None:intergenic | 30.0% |
!! | AGTAACCTATTGTATTGGTT+GGG | - | chr3.3:15016927-15016946 | MS.gene057924:intron | 30.0% |
!! | AGTTGATGATCATCATTGTT+GGG | - | chr3.3:15016637-15016656 | MS.gene057924:intron | 30.0% |
!! | ATTTTGCTTTATTGAGGAGA+CGG | + | chr3.3:15016805-15016824 | None:intergenic | 30.0% |
!! | GTCAAATTGATTTGCTTGTA+AGG | + | chr3.3:15017396-15017415 | None:intergenic | 30.0% |
AAGCAAATCAATTTGACTCC+TGG | - | chr3.3:15017399-15017418 | MS.gene057924:intron | 35.0% | |
AGATCATACATGGTAGGATT+TGG | - | chr3.3:15018160-15018179 | MS.gene057924:intron | 35.0% | |
AGCCATTTCTTAAAGCTTGT+GGG | + | chr3.3:15018262-15018281 | None:intergenic | 35.0% | |
AGGGAATTAACATATGTGCA+AGG | + | chr3.3:15018391-15018410 | None:intergenic | 35.0% | |
AGTATGATGTTGCAGCTTTA+GGG | - | chr3.3:15017870-15017889 | MS.gene057924:CDS | 35.0% | |
ATAATCTGTACCCCATCTAA+TGG | + | chr3.3:15016564-15016583 | None:intergenic | 35.0% | |
ATACTTGGATGGTAAACAGA+TGG | - | chr3.3:15018108-15018127 | MS.gene057924:intron | 35.0% | |
ATGTATAGGATGAGCTAATG+TGG | - | chr3.3:15017157-15017176 | MS.gene057924:CDS | 35.0% | |
ATTTGCTTGTAAGGACTATC+AGG | + | chr3.3:15017387-15017406 | None:intergenic | 35.0% | |
CAACAATGATGATCATCAAC+TGG | + | chr3.3:15016638-15016657 | None:intergenic | 35.0% | |
CTGGAGACAATGTGAAATAT+GGG | - | chr3.3:15016441-15016460 | MS.gene057924:intron | 35.0% | |
CTTGAACTCCAGCATATTTA+AGG | + | chr3.3:15017278-15017297 | None:intergenic | 35.0% | |
GATCATACATGGTAGGATTT+GGG | - | chr3.3:15018161-15018180 | MS.gene057924:intron | 35.0% | |
GGACAATTTATCTCTTCGTT+TGG | + | chr3.3:15018241-15018260 | None:intergenic | 35.0% | |
GGGTTTATTCATATGAGAGA+TGG | - | chr3.3:15017506-15017525 | MS.gene057924:intron | 35.0% | |
GTGACTATCTAATACTTGGA+TGG | - | chr3.3:15018097-15018116 | MS.gene057924:intron | 35.0% | |
TAGCCATTTCTTAAAGCTTG+TGG | + | chr3.3:15018263-15018282 | None:intergenic | 35.0% | |
TAGTATGATGTTGCAGCTTT+AGG | - | chr3.3:15017869-15017888 | MS.gene057924:CDS | 35.0% | |
TAGTGTAGCAGAATTCAGTT+GGG | - | chr3.3:15017251-15017270 | MS.gene057924:intron | 35.0% | |
TCTCATAAAGGAACCTATGA+TGG | - | chr3.3:15017008-15017027 | MS.gene057924:CDS | 35.0% | |
TGTATAGGATGAGCTAATGT+GGG | - | chr3.3:15017158-15017177 | MS.gene057924:CDS | 35.0% | |
TTTGGCAAAATCAAGGAGAT+GGG | + | chr3.3:15017642-15017661 | None:intergenic | 35.0% | |
! | ATTGAATAGGTTGACCTATC+AGG | - | chr3.3:15016404-15016423 | MS.gene057924:intron | 35.0% |
! | CTCACTCAGTTACATTTTGA+AGG | - | chr3.3:15017303-15017322 | MS.gene057924:intron | 35.0% |
! | CTTGAAGCATTTAAAGCACA+CGG | - | chr3.3:15017336-15017355 | MS.gene057924:CDS | 35.0% |
! | TCTTCGTTTGGTGACAAATT+TGG | + | chr3.3:15018229-15018248 | None:intergenic | 35.0% |
! | TTGAATAGGTTGACCTATCA+GGG | - | chr3.3:15016405-15016424 | MS.gene057924:intron | 35.0% |
! | TTTTGGCAAAATCAAGGAGA+TGG | + | chr3.3:15017643-15017662 | None:intergenic | 35.0% |
!! | CAGTTGATGATCATCATTGT+TGG | - | chr3.3:15016636-15016655 | MS.gene057924:intron | 35.0% |
!! | CTGCTTCTTCCATTGTTTTT+AGG | - | chr3.3:15016756-15016775 | MS.gene057924:CDS | 35.0% |
!! | CTTGCATTTTGGCAAAATCA+AGG | + | chr3.3:15017649-15017668 | None:intergenic | 35.0% |
AAATCCACATGAGCTAACTG+GGG | - | chr3.3:15018297-15018316 | MS.gene057924:CDS | 40.0% | |
ACCATGTATGATCTTCCTTC+AGG | + | chr3.3:15018154-15018173 | None:intergenic | 40.0% | |
AGTGAACAAGAAAGATGTGC+TGG | + | chr3.3:15017552-15017571 | None:intergenic | 40.0% | |
AGTTGGGACCTTAAATATGC+TGG | - | chr3.3:15017267-15017286 | MS.gene057924:intron | 40.0% | |
ATTGGGTCATCATTGCAACA+TGG | - | chr3.3:15015961-15015980 | MS.gene057924:CDS | 40.0% | |
CAAATCCACATGAGCTAACT+GGG | - | chr3.3:15018296-15018315 | MS.gene057924:CDS | 40.0% | |
CATCATAATATCCCCCTGAT+AGG | + | chr3.3:15016421-15016440 | None:intergenic | 40.0% | |
CGAAAAGCTGCTAGGAAATT+GGG | + | chr3.3:15016977-15016996 | None:intergenic | 40.0% | |
CTAGTGTAGCAGAATTCAGT+TGG | - | chr3.3:15017250-15017269 | MS.gene057924:intron | 40.0% | |
GAAACTCCCTCCCAATAATA+GGG | - | chr3.3:15016085-15016104 | MS.gene057924:CDS | 40.0% | |
GAAGGAAGATCATACATGGT+AGG | - | chr3.3:15018154-15018173 | MS.gene057924:intron | 40.0% | |
GCTGCAACATCATACTACAT+CGG | + | chr3.3:15017866-15017885 | None:intergenic | 40.0% | |
GCTGGAGACAATGTGAAATA+TGG | - | chr3.3:15016440-15016459 | MS.gene057924:intron | 40.0% | |
GTAGTAACTGTGAATGCCAT+TGG | + | chr3.3:15016470-15016489 | None:intergenic | 40.0% | |
TATGTTAATTCCCTTGCAGC+CGG | - | chr3.3:15018397-15018416 | MS.gene057924:CDS | 40.0% | |
TCCTGAAGGAAGATCATACA+TGG | - | chr3.3:15018150-15018169 | MS.gene057924:intron | 40.0% | |
TCGAAAAGCTGCTAGGAAAT+TGG | + | chr3.3:15016978-15016997 | None:intergenic | 40.0% | |
TTGAACTTGTCGTTGATGTC+AGG | + | chr3.3:15018337-15018356 | None:intergenic | 40.0% | |
! | CTAGCAAAGCTTGCTTCTTT+GGG | - | chr3.3:15018424-15018443 | MS.gene057924:CDS | 40.0% |
! | TCTAGCAAAGCTTGCTTCTT+TGG | - | chr3.3:15018423-15018442 | MS.gene057924:CDS | 40.0% |
! | TCTTAGAGGCACAAAGATCA+GGG | - | chr3.3:15016063-15016082 | MS.gene057924:CDS | 40.0% |
! | TGAATAGGTTGACCTATCAG+GGG | - | chr3.3:15016406-15016425 | MS.gene057924:intron | 40.0% |
! | TGTGAAATATGGGCTACCAA+TGG | - | chr3.3:15016451-15016470 | MS.gene057924:intron | 40.0% |
! | TTCCTAGCAGCTTTTCGAAT+TGG | - | chr3.3:15016980-15016999 | MS.gene057924:CDS | 40.0% |
! | TTCTTAGAGGCACAAAGATC+AGG | - | chr3.3:15016062-15016081 | MS.gene057924:CDS | 40.0% |
!! | ATTGTGGTATGGTGTTGTCA+CGG | + | chr3.3:15017951-15017970 | None:intergenic | 40.0% |
!! | GTCCCACAAGCTTTAAGAAA+TGG | - | chr3.3:15018257-15018276 | MS.gene057924:CDS | 40.0% |
AAGGGACCCTATTATTGGGA+GGG | + | chr3.3:15016094-15016113 | None:intergenic | 45.0% | |
AATAATAGGGTCCCTTGGAG+AGG | - | chr3.3:15016098-15016117 | MS.gene057924:CDS | 45.0% | |
ACACCATACCACAATCGTAG+AGG | - | chr3.3:15017956-15017975 | MS.gene057924:CDS | 45.0% | |
AGCAAGCTTTGCTAGAACAC+CGG | + | chr3.3:15018419-15018438 | None:intergenic | 45.0% | |
AGCTGAAACTTCTGCTGCTA+TGG | - | chr3.3:15016733-15016752 | MS.gene057924:CDS | 45.0% | |
CATGGCTATACATGGCAACA+AGG | - | chr3.3:15017187-15017206 | MS.gene057924:CDS | 45.0% | |
CCAAATCCACATGAGCTAAC+TGG | - | chr3.3:15018295-15018314 | MS.gene057924:CDS | 45.0% | |
CCAGTTAGCTCATGTGGATT+TGG | + | chr3.3:15018298-15018317 | None:intergenic | 45.0% | |
CCTGAATAGGAGCAGTAGAA+GGG | + | chr3.3:15017041-15017060 | None:intergenic | 45.0% | |
CTCCAAGGGACCCTATTATT+GGG | + | chr3.3:15016098-15016117 | None:intergenic | 45.0% | |
CTTTGGATCCTCTACGATTG+TGG | + | chr3.3:15017967-15017986 | None:intergenic | 45.0% | |
GAACAAGAAAGATGTGCTGG+TGG | + | chr3.3:15017549-15017568 | None:intergenic | 45.0% | |
GAAGGGACATTCTCCATCAT+AGG | + | chr3.3:15017024-15017043 | None:intergenic | 45.0% | |
GATCCTCTACGATTGTGGTA+TGG | + | chr3.3:15017962-15017981 | None:intergenic | 45.0% | |
GCTGGTGGCATATTGTGTAT+TGG | + | chr3.3:15017534-15017553 | None:intergenic | 45.0% | |
GCTTGTAAGGACTATCAGGA+AGG | + | chr3.3:15017383-15017402 | None:intergenic | 45.0% | |
GGAAACTCCCTCCCAATAAT+AGG | - | chr3.3:15016084-15016103 | MS.gene057924:CDS | 45.0% | |
TCAGGGGGATATTATGATGC+TGG | - | chr3.3:15016422-15016441 | MS.gene057924:intron | 45.0% | |
TCTCCAAGGGACCCTATTAT+TGG | + | chr3.3:15016099-15016118 | None:intergenic | 45.0% | |
TGCCAATTCGAAAAGCTGCT+AGG | + | chr3.3:15016985-15017004 | None:intergenic | 45.0% | |
! | GAATAGGTTGACCTATCAGG+GGG | - | chr3.3:15016407-15016426 | MS.gene057924:intron | 45.0% |
! | TATGTGCAAGGTTCGGTCTT+AGG | + | chr3.3:15018379-15018398 | None:intergenic | 45.0% |
!! | ACATGGCTTGCTTTGTTCCA+AGG | - | chr3.3:15015978-15015997 | MS.gene057924:CDS | 45.0% |
!!! | ATAAATAATGTATTTTTTTA+AGG | + | chr3.3:15017695-15017714 | None:intergenic | 5.0% |
!!! | TAAATAATGTATTTTTTTAA+GGG | + | chr3.3:15017694-15017713 | None:intergenic | 5.0% |
AGGAGACGGCGAGCATATTT+AGG | + | chr3.3:15016791-15016810 | None:intergenic | 50.0% | |
ATTGCTGAGTCTCCTCTCCA+AGG | + | chr3.3:15016113-15016132 | None:intergenic | 50.0% | |
CAAGGGACCCTATTATTGGG+AGG | + | chr3.3:15016095-15016114 | None:intergenic | 50.0% | |
CCAACACAAGCTCACCATAG+AGG | - | chr3.3:15018193-15018212 | MS.gene057924:intron | 50.0% | |
CCCTTCTACTGCTCCTATTC+AGG | - | chr3.3:15017038-15017057 | MS.gene057924:CDS | 50.0% | |
CCTCTATGGTGAGCTTGTGT+TGG | + | chr3.3:15018196-15018215 | None:intergenic | 50.0% | |
CTATGGTGAGCTTGTGTTGG+TGG | + | chr3.3:15018193-15018212 | None:intergenic | 50.0% | |
CTCCCAATAATAGGGTCCCT+TGG | - | chr3.3:15016093-15016112 | MS.gene057924:CDS | 50.0% | |
GATGTCAGGTCCACCAACAA+TGG | + | chr3.3:15018323-15018342 | None:intergenic | 50.0% | |
GCCTGAATAGGAGCAGTAGA+AGG | + | chr3.3:15017042-15017061 | None:intergenic | 50.0% | |
GGAGACTCAGCAATGGATGA+TGG | - | chr3.3:15016119-15016138 | MS.gene057924:CDS | 50.0% | |
GGCTGCAACATGGCTATACA+TGG | - | chr3.3:15017179-15017198 | MS.gene057924:CDS | 50.0% | |
TCAGCTGCAATCTCAGTACC+AGG | + | chr3.3:15016719-15016738 | None:intergenic | 50.0% | |
TTGCTGAGTCTCCTCTCCAA+GGG | + | chr3.3:15016112-15016131 | None:intergenic | 50.0% | |
TTGGAGAGGAGACTCAGCAA+TGG | - | chr3.3:15016112-15016131 | MS.gene057924:CDS | 50.0% | |
! | AGCTAATGTGGGCTGCAACA+TGG | - | chr3.3:15017169-15017188 | MS.gene057924:CDS | 50.0% |
! | TTGGCACTGAAGCACCTCTA+TGG | + | chr3.3:15018210-15018229 | None:intergenic | 50.0% |
ATGGCCCCAGTTAGCTCATG+TGG | + | chr3.3:15018304-15018323 | None:intergenic | 55.0% | |
CTAACTGGGGCCATTGTTGG+TGG | - | chr3.3:15018310-15018329 | MS.gene057924:CDS | 55.0% | |
GAGCTAACTGGGGCCATTGT+TGG | - | chr3.3:15018307-15018326 | MS.gene057924:CDS | 55.0% | |
! | TGCTAGAACACCGGCTGCAA+GGG | + | chr3.3:15018410-15018429 | None:intergenic | 55.0% |
! | TTGCTAGAACACCGGCTGCA+AGG | + | chr3.3:15018411-15018430 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 15015942 | 15018450 | 15015942 | ID=MS.gene057924 |
chr3.3 | mRNA | 15015942 | 15018450 | 15015942 | ID=MS.gene057924.t1;Parent=MS.gene057924 |
chr3.3 | exon | 15018238 | 15018450 | 15018238 | ID=MS.gene057924.t1.exon1;Parent=MS.gene057924.t1 |
chr3.3 | CDS | 15018238 | 15018450 | 15018238 | ID=cds.MS.gene057924.t1;Parent=MS.gene057924.t1 |
chr3.3 | exon | 15017796 | 15017979 | 15017796 | ID=MS.gene057924.t1.exon2;Parent=MS.gene057924.t1 |
chr3.3 | CDS | 15017796 | 15017979 | 15017796 | ID=cds.MS.gene057924.t1;Parent=MS.gene057924.t1 |
chr3.3 | exon | 15017566 | 15017762 | 15017566 | ID=MS.gene057924.t1.exon3;Parent=MS.gene057924.t1 |
chr3.3 | CDS | 15017566 | 15017762 | 15017566 | ID=cds.MS.gene057924.t1;Parent=MS.gene057924.t1 |
chr3.3 | exon | 15017325 | 15017402 | 15017325 | ID=MS.gene057924.t1.exon4;Parent=MS.gene057924.t1 |
chr3.3 | CDS | 15017325 | 15017402 | 15017325 | ID=cds.MS.gene057924.t1;Parent=MS.gene057924.t1 |
chr3.3 | exon | 15017125 | 15017227 | 15017125 | ID=MS.gene057924.t1.exon5;Parent=MS.gene057924.t1 |
chr3.3 | CDS | 15017125 | 15017227 | 15017125 | ID=cds.MS.gene057924.t1;Parent=MS.gene057924.t1 |
chr3.3 | exon | 15016972 | 15017094 | 15016972 | ID=MS.gene057924.t1.exon6;Parent=MS.gene057924.t1 |
chr3.3 | CDS | 15016972 | 15017094 | 15016972 | ID=cds.MS.gene057924.t1;Parent=MS.gene057924.t1 |
chr3.3 | exon | 15016725 | 15016888 | 15016725 | ID=MS.gene057924.t1.exon7;Parent=MS.gene057924.t1 |
chr3.3 | CDS | 15016725 | 15016888 | 15016725 | ID=cds.MS.gene057924.t1;Parent=MS.gene057924.t1 |
chr3.3 | exon | 15015942 | 15016265 | 15015942 | ID=MS.gene057924.t1.exon8;Parent=MS.gene057924.t1 |
chr3.3 | CDS | 15015942 | 15016265 | 15015942 | ID=cds.MS.gene057924.t1;Parent=MS.gene057924.t1 |
Gene Sequence |
Protein sequence |