AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064789


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064789.t1 MTR_3g114540 94.298 456 16 2 1 446 1 456 0.0 854
MS.gene064789.t1 MTR_3g114540 92.570 323 14 2 1 313 1 323 0.0 583
MS.gene064789.t1 MTR_1g095580 25.148 338 177 10 98 407 54 343 1.12e-13 72.8
MS.gene064789.t1 MTR_1g095580 25.271 277 153 7 98 359 54 291 1.16e-13 72.0
MS.gene064789.t1 MTR_1g095580 25.271 277 153 7 98 359 54 291 1.91e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064789.t1 AT1G76050 66.929 381 110 3 53 430 62 429 8.13e-179 506
MS.gene064789.t1 AT1G76050 66.415 265 73 3 53 314 62 313 4.04e-115 340
MS.gene064789.t1 AT3G52260 26.165 279 149 7 98 358 56 295 1.09e-16 81.6
MS.gene064789.t1 AT3G52260 26.165 279 149 7 98 358 56 295 3.81e-16 80.1
MS.gene064789.t1 AT3G52260 24.555 281 155 7 102 364 90 331 7.79e-14 73.6

Find 114 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTGCGCATGCCAAGTATT+TGG 0.214985 3.4:+98184035 MS.gene064789:CDS
TTGAAGTTCTAAAGTGAAAT+TGG 0.222929 3.4:-98179819 None:intergenic
GAATCTGATGATGAACTTAA+TGG 0.254410 3.4:+98181895 MS.gene064789:CDS
GGGGTACCTACTCCAGTTTC+TGG 0.276248 3.4:+98182240 MS.gene064789:CDS
ATCATACGAAGCCGGTTATT+AGG 0.304094 3.4:-98182291 None:intergenic
ACGTCTGGGACACTTGTAAA+TGG 0.307453 3.4:+98181805 MS.gene064789:CDS
TGCCTTCATGCTTTGACTCT+CGG 0.309092 3.4:+98184186 MS.gene064789:CDS
CGTGCGCATGCCAAGTATTT+GGG 0.328224 3.4:+98184036 MS.gene064789:CDS
GTTAGATTCTAGATTGTCTA+TGG 0.343480 3.4:+98181948 MS.gene064789:CDS
ACCTCAACACGTCCAGAAAC+TGG 0.356510 3.4:-98182252 None:intergenic
GCCTTCATGCTTTGACTCTC+GGG 0.373527 3.4:+98184187 MS.gene064789:CDS
CTGCTAGGTGATGAGGTATA+TGG 0.375337 3.4:+98184066 MS.gene064789:CDS
AAAGTAATTGAGATACTTGC+TGG 0.384759 3.4:+98182879 MS.gene064789:CDS
AAACAGTTTCTGAGCTAGAT+AGG 0.391798 3.4:+98184160 MS.gene064789:CDS
TTGAGCCAGCTTCGTAGAAT+TGG 0.391980 3.4:+98184388 MS.gene064789:CDS
GCAATGGGAGAGAAGTAAAA+TGG 0.392902 3.4:-98179847 None:intergenic
AAAATGTCATTAAAATCTAC+AGG 0.393988 3.4:-98184367 None:intergenic
TCTTTAGAAAATTCAACATT+TGG 0.398853 3.4:-98181850 None:intergenic
TCTAATCTGTGTACAATCCC+TGG 0.409587 3.4:-98181982 None:intergenic
GACGATGGTGGAATCAAATC+TGG 0.417745 3.4:+98179958 MS.gene064789:CDS
CCAGCACCTGGCAATACGTC+TGG 0.433660 3.4:+98181790 MS.gene064789:CDS
TAGAAAATTCAACATTTGGC+AGG 0.440551 3.4:-98181846 None:intergenic
GTTGAGTGGAAGTTGGAAAC+TGG 0.442106 3.4:+98182918 MS.gene064789:CDS
AGGTTTCAGCATCCTCATAC+AGG 0.447372 3.4:+98184316 MS.gene064789:intron
GTTTCTTTCAATGTCAGAGC+TGG 0.450108 3.4:+98181326 MS.gene064789:CDS
CAGAGGTACACCCAAATACT+TGG 0.452967 3.4:-98184046 None:intergenic
CACTACCAATTCTACGAAGC+TGG 0.462868 3.4:-98184393 None:intergenic
GGAAACTGGACGCACTCATC+AGG 0.468105 3.4:+98182932 MS.gene064789:CDS
GAATTACGCCGGCGTGCGGT+TGG 0.475378 3.4:+98179924 MS.gene064789:CDS
GTCTACGTTAGTCTCACTGC+CGG 0.477724 3.4:+98182219 MS.gene064789:CDS
GAAAATTGAGACTCGATAGT+TGG 0.478506 3.4:+98179980 MS.gene064789:CDS
TTATTAGGATCACGGCCAAC+AGG 0.479835 3.4:-98182276 None:intergenic
GTAGAAACGGATTTCGCAAT+GGG 0.481273 3.4:-98179862 None:intergenic
TTCGGAATTACCATGTGAGC+AGG 0.484681 3.4:-98181458 None:intergenic
CAACATTTGGCAGGTTGCAA+TGG 0.489674 3.4:-98181837 None:intergenic
ACCCTTCAGAAGAACTTGAC+TGG 0.494113 3.4:-98181927 None:intergenic
TGGATCTCTTCTCGCATCAA+TGG 0.494517 3.4:+98180000 MS.gene064789:CDS
TTTCTTTCAATGTCAGAGCT+GGG 0.495851 3.4:+98181327 MS.gene064789:CDS
TTGGCCGTGATCCTAATAAC+CGG 0.497077 3.4:+98182280 MS.gene064789:CDS
TGCATTGGTTGAGTGGAAGT+TGG 0.497604 3.4:+98182911 MS.gene064789:CDS
TCCAGTTTCTGGACGTGTTG+AGG 0.498584 3.4:+98182251 MS.gene064789:CDS
GCTGGACTCGTTCATGTCAA+TGG 0.501112 3.4:+98180057 MS.gene064789:CDS
TCACCTACTAGCCGCATGAC+GGG 0.501679 3.4:-98182346 None:intergenic
AACATTTCGCTATGCAAACT+CGG 0.501751 3.4:-98184135 None:intergenic
GTAGCTGTGCATTGGTTGAG+TGG 0.505625 3.4:+98182904 MS.gene064789:CDS
CAATGGCCGTGTTGTTGATA+AGG 0.509560 3.4:+98180074 MS.gene064789:CDS
GCAGCAGTTGAGAGCTGTGC+CGG 0.509649 3.4:+98181379 MS.gene064789:CDS
CATAAATAAACCTGCTCACA+TGG 0.510867 3.4:+98181448 MS.gene064789:CDS
TTTCACAGAATTGACTAGTC+CGG 0.511251 3.4:-98182322 None:intergenic
TCTACGTTAGTCTCACTGCC+GGG 0.511350 3.4:+98182220 MS.gene064789:CDS
GTTTATTTATGACTAGCAAA+TGG 0.513827 3.4:-98181436 None:intergenic
AGTGTCCCAGACGTATTGCC+AGG 0.521402 3.4:-98181796 None:intergenic
GTCCAGTCAAGTATTAAAGC+TGG 0.521976 3.4:+98180039 MS.gene064789:CDS
GCATCCTCATACAGGGGAGC+AGG 0.525403 3.4:+98184324 MS.gene064789:CDS
TGCAAACTCGGAGTTGTTCG+TGG 0.526136 3.4:-98184123 None:intergenic
TCCCAGTCAAGTTCTTCTGA+AGG 0.527724 3.4:+98181925 MS.gene064789:CDS
GTCCAGCTTTAATACTTGAC+TGG 0.528396 3.4:-98180041 None:intergenic
CCCTTCAGAAGAACTTGACT+GGG 0.529961 3.4:-98181926 None:intergenic
AAGCCCGTCATGCGGCTAGT+AGG 0.531246 3.4:+98182343 MS.gene064789:CDS
ATCATCGAAGAAAGTAGAAA+CGG 0.535644 3.4:-98179875 None:intergenic
TGCACCTGCTCCCCTGTATG+AGG 0.537559 3.4:-98184328 None:intergenic
CTTCGTATGATCGCTGTAGC+CGG 0.547253 3.4:+98182303 MS.gene064789:CDS
TTATCGCTTAACACCTCATG+TGG 0.549398 3.4:+98179763 MS.gene064789:CDS
TAGGTTGTGCATCCAGCACC+TGG 0.549682 3.4:+98181778 MS.gene064789:intron
CCAGACGTATTGCCAGGTGC+TGG 0.551763 3.4:-98181790 None:intergenic
CTAATCTGTGTACAATCCCT+GGG 0.557086 3.4:-98181981 None:intergenic
CCCAGTCAAGTTCTTCTGAA+GGG 0.559475 3.4:+98181926 MS.gene064789:CDS
TTCGATGATTCAAACTCCAA+CGG 0.562551 3.4:+98179889 MS.gene064789:CDS
GGACGTGTTGAGGTTCCTGT+TGG 0.563398 3.4:+98182261 MS.gene064789:CDS
TGGGTTACTAGTTGTCGCTA+AGG 0.563661 3.4:+98182017 MS.gene064789:CDS
GAAGAAATTGTCGACGATGG+TGG 0.564642 3.4:+98179946 MS.gene064789:CDS
TGTACCTCTGCTAGGTGATG+AGG 0.565230 3.4:+98184059 MS.gene064789:CDS
TGAAAGTATTTCTCACTCAA+AGG 0.574310 3.4:+98184414 MS.gene064789:CDS
GGTTTCAGCATCCTCATACA+GGG 0.574635 3.4:+98184317 MS.gene064789:intron
AAGTAATTGAGATACTTGCT+GGG 0.576544 3.4:+98182880 MS.gene064789:CDS
CAGCACCTGGCAATACGTCT+GGG 0.578291 3.4:+98181791 MS.gene064789:CDS
AGTAGAAACGGATTTCGCAA+TGG 0.578492 3.4:-98179863 None:intergenic
TGTGCCGGAAAACATACCTC+TGG 0.579322 3.4:+98181394 MS.gene064789:CDS
GCATGGTCTTGTCATTGCTA+CGG 0.579433 3.4:+98184100 MS.gene064789:CDS
TCTATGGCATCAATTCGCCC+AGG 0.580707 3.4:+98181964 MS.gene064789:CDS
AGATTAGACAAAGGCACGAG+TGG 0.588012 3.4:+98181997 MS.gene064789:CDS
ATCACCTACTAGCCGCATGA+CGG 0.592873 3.4:-98182347 None:intergenic
TTCTTTCAATGTCAGAGCTG+GGG 0.593498 3.4:+98181328 MS.gene064789:CDS
CTAGGTGATGAGGTATATGG+AGG 0.595073 3.4:+98184069 MS.gene064789:CDS
TATTTGGGTGTACCTCTGCT+AGG 0.595506 3.4:+98184051 MS.gene064789:CDS
GTTTCAGCATCCTCATACAG+GGG 0.596383 3.4:+98184318 MS.gene064789:CDS
AAATGTCATTAAAATCTACA+GGG 0.601078 3.4:-98184366 None:intergenic
ACCCGAGAGTCAAAGCATGA+AGG 0.607294 3.4:-98184188 None:intergenic
TTCTGTGAAAGCCCGTCATG+CGG 0.607595 3.4:+98182335 MS.gene064789:CDS
AGAGTCAAAGCATGAAGGCA+AGG 0.615312 3.4:-98184183 None:intergenic
TCAAGCTACGCACTATCAAG+AGG 0.626322 3.4:+98182196 MS.gene064789:CDS
AAACGAATTACGCCGGCGTG+CGG 0.629163 3.4:+98179920 MS.gene064789:CDS
CTATGGCATCAATTCGCCCA+GGG 0.635497 3.4:+98181965 MS.gene064789:CDS
CAAGCTACGCACTATCAAGA+GGG 0.647303 3.4:+98182197 MS.gene064789:CDS
GATTAGACAAAGGCACGAGT+GGG 0.651038 3.4:+98181998 MS.gene064789:CDS
AGTAATTGAGATACTTGCTG+GGG 0.652006 3.4:+98182881 MS.gene064789:CDS
CTACAGCGATCATACGAAGC+CGG 0.657140 3.4:-98182299 None:intergenic
ATATGGAGGGACGAAAAGCA+TGG 0.659140 3.4:+98184083 MS.gene064789:CDS
TGAGATCAAATGTACGATTG+CGG 0.665499 3.4:+98181352 MS.gene064789:CDS
TTGGAAGAAATTGTCGACGA+TGG 0.672159 3.4:+98179943 MS.gene064789:CDS
AATTTCTTCCAACCGCACGC+CGG 0.673764 3.4:-98179932 None:intergenic
AACACCACAAAATCCACATG+AGG 0.679176 3.4:-98179776 None:intergenic
GAAGCCGGTTATTAGGATCA+CGG 0.679316 3.4:-98182284 None:intergenic
ACACGTCCAGAAACTGGAGT+AGG 0.683054 3.4:-98182246 None:intergenic
TCTTCATAAACTATATCCAG+AGG 0.684572 3.4:-98181410 None:intergenic
CTACGTTAGTCTCACTGCCG+GGG 0.686770 3.4:+98182221 MS.gene064789:CDS
AGAAACTGGAGTAGGTACCC+CGG 0.688257 3.4:-98182238 None:intergenic
TAGGTGATGAGGTATATGGA+GGG 0.689938 3.4:+98184070 MS.gene064789:CDS
ATGTCATTAAAATCTACAGG+GGG 0.696305 3.4:-98184364 None:intergenic
AATGTCATTAAAATCTACAG+GGG 0.696801 3.4:-98184365 None:intergenic
TATACCTCATCACCTAGCAG+AGG 0.705895 3.4:-98184063 None:intergenic
AGACTACCTTATCAACAACA+CGG 0.706446 3.4:-98180080 None:intergenic
ATTGTACACAGATTAGACAA+AGG 0.708980 3.4:+98181988 MS.gene064789:CDS
GTAATTGAGATACTTGCTGG+GGG 0.718933 3.4:+98182882 MS.gene064789:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTAAAATAGATTTAG+AGG + chr3.4:98183785-98183804 MS.gene064789:intron 10.0%
!! TAATATTACATATTACATTT+GGG + chr3.4:98182764-98182783 MS.gene064789:intron 10.0%
!! TACTAATATTGAATTATATT+AGG + chr3.4:98182407-98182426 MS.gene064789:intron 10.0%
!!! ATTTTCATTCTAAATTAATT+AGG + chr3.4:98181235-98181254 MS.gene064789:intron 10.0%
!! GTAATATTACATATTACATT+TGG + chr3.4:98182763-98182782 MS.gene064789:intron 15.0%
!! TAAATTAATTAGGTTCTTTA+AGG + chr3.4:98181245-98181264 MS.gene064789:intron 15.0%
!! TTAGAAGATATTATAAGTTT+AGG - chr3.4:98183991-98184010 None:intergenic 15.0%
!! TTTACATATAATGTATTCTT+AGG + chr3.4:98183129-98183148 MS.gene064789:intron 15.0%
!!! ATATTACATATATTTTGCAA+TGG - chr3.4:98182750-98182769 None:intergenic 15.0%
!!! GTTTTCATATATTATATCTT+AGG - chr3.4:98183232-98183251 None:intergenic 15.0%
!! AAAATGTCATTAAAATCTAC+AGG - chr3.4:98184370-98184389 None:intergenic 20.0%
!! AAATAACCAAACAAAAAACT+GGG - chr3.4:98181143-98181162 None:intergenic 20.0%
!! AAATATTCTGAGTATAATAG+TGG + chr3.4:98180975-98180994 MS.gene064789:intron 20.0%
!! AAATGTAAACATTTGATTCA+AGG + chr3.4:98183371-98183390 MS.gene064789:intron 20.0%
!! AAATGTCATTAAAATCTACA+GGG - chr3.4:98184369-98184388 None:intergenic 20.0%
!! AAGTGTTTCATGTAATAAAA+AGG + chr3.4:98183421-98183440 MS.gene064789:intron 20.0%
!! ATAAATATATTCTAGGTCTA+GGG - chr3.4:98181116-98181135 None:intergenic 20.0%
!! ATCATTTAAACATTCAAGAA+TGG - chr3.4:98180811-98180830 None:intergenic 20.0%
!! TTACATAGTTTAAACATCTT+AGG + chr3.4:98183316-98183335 MS.gene064789:intron 20.0%
!! TTTGAGAAGTTTATTCAAAA+AGG + chr3.4:98182793-98182812 MS.gene064789:intron 20.0%
!!! AAATGTTGAATTTTCTAAAG+AGG + chr3.4:98181852-98181871 MS.gene064789:CDS 20.0%
!!! AATACTTGATGATTAAATTC+AGG + chr3.4:98181607-98181626 MS.gene064789:intron 20.0%
!!! ATTACTACGAATTTTCTATT+TGG + chr3.4:98180156-98180175 MS.gene064789:intron 20.0%
!!! TAAGATAACTTTTGTTTGAA+TGG + chr3.4:98183205-98183224 MS.gene064789:intron 20.0%
!!! TCTTTAGAAAATTCAACATT+TGG - chr3.4:98181853-98181872 None:intergenic 20.0%
! AATGTCATTAAAATCTACAG+GGG - chr3.4:98184368-98184387 None:intergenic 25.0%
! ACATATAATGTATTCTTAGG+TGG + chr3.4:98183132-98183151 MS.gene064789:intron 25.0%
! AGGTCAAATGTTAAAAAAGA+TGG + chr3.4:98183336-98183355 MS.gene064789:intron 25.0%
! ATAAATGTGTACACAAATGT+TGG - chr3.4:98182507-98182526 None:intergenic 25.0%
! CATAAATATATTCTAGGTCT+AGG - chr3.4:98181117-98181136 None:intergenic 25.0%
! GAAATAACCAAACAAAAAAC+TGG - chr3.4:98181144-98181163 None:intergenic 25.0%
! GGGATACATAAATATATTCT+AGG - chr3.4:98181123-98181142 None:intergenic 25.0%
! GTTTATTTATGACTAGCAAA+TGG - chr3.4:98181439-98181458 None:intergenic 25.0%
! TAAAAGTTCCTTAGTAAGAA+AGG + chr3.4:98183690-98183709 MS.gene064789:intron 25.0%
! TCGAATATTTAGATGAGAAA+GGG + chr3.4:98180604-98180623 MS.gene064789:intron 25.0%
! TGTTTAAACTATGTAACTTG+TGG - chr3.4:98183312-98183331 None:intergenic 25.0%
! TTCGAATATTTAGATGAGAA+AGG + chr3.4:98180603-98180622 MS.gene064789:intron 25.0%
! TTTATTACATGAAACACTTG+AGG - chr3.4:98183420-98183439 None:intergenic 25.0%
!! AGAAATTTTCAGAAGGAAAA+GGG + chr3.4:98181705-98181724 MS.gene064789:intron 25.0%
!! ATATATCCCTTGTTTATTTG+TGG + chr3.4:98180557-98180576 MS.gene064789:intron 25.0%
!! ATTTATGATTTGCAAACAAG+AGG - chr3.4:98181215-98181234 None:intergenic 25.0%
!! GTTTTATATCAACTGCTTAA+TGG + chr3.4:98182815-98182834 MS.gene064789:intron 25.0%
!! TCAAAGGCCAAATTTTTAAA+AGG + chr3.4:98184430-98184449 MS.gene064789:CDS 25.0%
!! TGAATTATATTAGGTGCTTT+TGG + chr3.4:98182416-98182435 MS.gene064789:intron 25.0%
!! TGTTTGGTTATTTCATCAAT+TGG + chr3.4:98181150-98181169 MS.gene064789:intron 25.0%
!! TTTCTTACTAAGGAACTTTT+AGG - chr3.4:98183691-98183710 None:intergenic 25.0%
!!! AAAGGCCAAATTTTTAAAAG+GGG + chr3.4:98184432-98184451 MS.gene064789:CDS 25.0%
!!! CAAAGGCCAAATTTTTAAAA+GGG + chr3.4:98184431-98184450 MS.gene064789:CDS 25.0%
!!! CAATACCCCTTTTAAAAATT+TGG - chr3.4:98184440-98184459 None:intergenic 25.0%
!!! TAAAATTGTGAAGTCACTTT+TGG - chr3.4:98180435-98180454 None:intergenic 25.0%
!!! TTGAAGTTCTAAAGTGAAAT+TGG - chr3.4:98179822-98179841 None:intergenic 25.0%
AAAAAAGATGGAGAAACAGA+GGG + chr3.4:98183348-98183367 MS.gene064789:intron 30.0%
AAAGTAATTGAGATACTTGC+TGG + chr3.4:98182879-98182898 MS.gene064789:CDS 30.0%
AAATAACATCTTAGAGCAAG+TGG - chr3.4:98181484-98181503 None:intergenic 30.0%
AAATCCAGATCATTCAATCT+TGG + chr3.4:98180533-98180552 MS.gene064789:intron 30.0%
AACCAAAATCCATGTTTATG+AGG - chr3.4:98180272-98180291 None:intergenic 30.0%
AACTGACCACAAATAAACAA+GGG - chr3.4:98180566-98180585 None:intergenic 30.0%
AAGAAAAAACCCTAGCTTAA+AGG + chr3.4:98183263-98183282 MS.gene064789:intron 30.0%
AAGAAAGGTAGATTAGATCA+AGG + chr3.4:98183705-98183724 MS.gene064789:intron 30.0%
AAGTAATTGAGATACTTGCT+GGG + chr3.4:98182880-98182899 MS.gene064789:CDS 30.0%
AATGAGTGAAAATACTACAC+GGG + chr3.4:98183567-98183586 MS.gene064789:intron 30.0%
ACATTGCATAGATGTACTAA+CGG + chr3.4:98183071-98183090 MS.gene064789:intron 30.0%
ACCATTACTTAGGACATTTA+AGG + chr3.4:98180930-98180949 MS.gene064789:intron 30.0%
AGAACTTGTAGACACAAATT+CGG - chr3.4:98180133-98180152 None:intergenic 30.0%
ATAACTTCGTAGCTAAACTT+TGG + chr3.4:98184229-98184248 MS.gene064789:intron 30.0%
ATATCAAGGCATACAAATAC+TGG - chr3.4:98182139-98182158 None:intergenic 30.0%
ATCATCGAAGAAAGTAGAAA+CGG - chr3.4:98179878-98179897 None:intergenic 30.0%
ATGTCATTAAAATCTACAGG+GGG - chr3.4:98184367-98184386 None:intergenic 30.0%
ATTGTACACAGATTAGACAA+AGG + chr3.4:98181988-98182007 MS.gene064789:CDS 30.0%
CAGAGATCCATTAATATCAA+TGG + chr3.4:98180409-98180428 MS.gene064789:intron 30.0%
CCTACAGGTTAAAAGTTAAA+TGG - chr3.4:98182557-98182576 None:intergenic 30.0%
CTAATCTACCTTTCTTACTA+AGG - chr3.4:98183701-98183720 None:intergenic 30.0%
GAATGAGTGAAAATACTACA+CGG + chr3.4:98183566-98183585 MS.gene064789:intron 30.0%
GCTCAACTACAAATTAAGAA+AGG - chr3.4:98181285-98181304 None:intergenic 30.0%
GTAAACATTTGATTCAAGGA+AGG + chr3.4:98183375-98183394 MS.gene064789:intron 30.0%
GTGATGAGTTAACTAATAGA+AGG - chr3.4:98180385-98180404 None:intergenic 30.0%
GTTAGATTCTAGATTGTCTA+TGG + chr3.4:98181948-98181967 MS.gene064789:CDS 30.0%
TAAAAAAGATGGAGAAACAG+AGG + chr3.4:98183347-98183366 MS.gene064789:intron 30.0%
TAGAAAATTCAACATTTGGC+AGG - chr3.4:98181849-98181868 None:intergenic 30.0%
TAGGCTTTACTATATTACAG+TGG - chr3.4:98183972-98183991 None:intergenic 30.0%
TATCAAGGCATACAAATACT+GGG - chr3.4:98182138-98182157 None:intergenic 30.0%
TATCTACTGTACAATTATGC+AGG - chr3.4:98181526-98181545 None:intergenic 30.0%
TATTCCAAGATTGAATGATC+TGG - chr3.4:98180540-98180559 None:intergenic 30.0%
TATTTGTATGCCTTGATATC+AGG + chr3.4:98182140-98182159 MS.gene064789:intron 30.0%
TCATATATTGCATTTGCAAG+AGG + chr3.4:98180709-98180728 MS.gene064789:intron 30.0%
TCTTCATAAACTATATCCAG+AGG - chr3.4:98181413-98181432 None:intergenic 30.0%
TGGGTCTATTGTGTAAAAAT+TGG + chr3.4:98183624-98183643 MS.gene064789:intron 30.0%
TTGTAAGTGAGAGAACTAAA+GGG + chr3.4:98183002-98183021 MS.gene064789:intron 30.0%
TTTAAATGATGCACCCAAAT+TGG + chr3.4:98180821-98180840 MS.gene064789:intron 30.0%
TTTATAAGCTAATGACCTAC+AGG - chr3.4:98182572-98182591 None:intergenic 30.0%
TTTGAGAACTACCATTACTT+AGG + chr3.4:98180920-98180939 MS.gene064789:intron 30.0%
! AAAGTTGATTACTATCTGTC+AGG + chr3.4:98182853-98182872 MS.gene064789:intron 30.0%
! AACTTTAGAGAAATCCTAAG+TGG + chr3.4:98182969-98182988 MS.gene064789:intron 30.0%
! AATTGATAGCACTATTGGTT+TGG + chr3.4:98184280-98184299 MS.gene064789:intron 30.0%
! ATGACAATTGATAGCACTAT+TGG + chr3.4:98184275-98184294 MS.gene064789:intron 30.0%
! ATGTAACTTGTGGTATTGTA+TGG - chr3.4:98183302-98183321 None:intergenic 30.0%
! CAACTTTTACCTTTAAGCTA+GGG - chr3.4:98183275-98183294 None:intergenic 30.0%
! CAGAAATTTTCAGAAGGAAA+AGG + chr3.4:98181704-98181723 MS.gene064789:intron 30.0%
! CTTTTGGCCATTGATATTAA+TGG - chr3.4:98180419-98180438 None:intergenic 30.0%
! GAATCTGATGATGAACTTAA+TGG + chr3.4:98181895-98181914 MS.gene064789:CDS 30.0%
! TAATTTGTAGTTGAGCATTG+TGG + chr3.4:98181289-98181308 MS.gene064789:intron 30.0%
! TTTTGCCTTTAGTGATTGAA+TGG - chr3.4:98183732-98183751 None:intergenic 30.0%
!! CCATTTAACTTTTAACCTGT+AGG + chr3.4:98182554-98182573 MS.gene064789:intron 30.0%
!! TACTTTTCGAACAAGTATTG+TGG - chr3.4:98181055-98181074 None:intergenic 30.0%
!! TCATAAACATGGATTTTGGT+TGG + chr3.4:98180271-98180290 MS.gene064789:intron 30.0%
!! TGAAAGTATTTCTCACTCAA+AGG + chr3.4:98184414-98184433 MS.gene064789:CDS 30.0%
!! TTTTAAGTGAGTGCAAACTA+TGG - chr3.4:98182623-98182642 None:intergenic 30.0%
!!! ATGTATCCCAGTTTTTTGTT+TGG + chr3.4:98181134-98181153 MS.gene064789:intron 30.0%
AAAACATGGTCGAATTTCCA+TGG + chr3.4:98183044-98183063 MS.gene064789:intron 35.0%
AAAATCCATGTTTATGAGGC+TGG - chr3.4:98180268-98180287 None:intergenic 35.0%
AAACAGTTTCTGAGCTAGAT+AGG + chr3.4:98184160-98184179 MS.gene064789:CDS 35.0%
AAATCCATGTTTATGAGGCT+GGG - chr3.4:98180267-98180286 None:intergenic 35.0%
AACATTTCGCTATGCAAACT+CGG - chr3.4:98184138-98184157 None:intergenic 35.0%
AACATTTGATTCAAGGAAGG+TGG + chr3.4:98183378-98183397 MS.gene064789:intron 35.0%
AAGGACCATTCAATCACTAA+AGG + chr3.4:98183724-98183743 MS.gene064789:intron 35.0%
AGACTACCTTATCAACAACA+CGG - chr3.4:98180083-98180102 None:intergenic 35.0%
AGATTTAGAGGACAATGCTT+TGG + chr3.4:98183797-98183816 MS.gene064789:intron 35.0%
ATACTACACGGGATATGATT+AGG + chr3.4:98183578-98183597 MS.gene064789:intron 35.0%
CAAATTCGGAACAGTTGAAA+TGG - chr3.4:98180119-98180138 None:intergenic 35.0%
CAAGGAAAGACTTCCAATTT+GGG - chr3.4:98180837-98180856 None:intergenic 35.0%
CAATCACTAAAGGCAAAAGA+AGG + chr3.4:98183734-98183753 MS.gene064789:intron 35.0%
CATAAATAAACCTGCTCACA+TGG + chr3.4:98181448-98181467 MS.gene064789:CDS 35.0%
CATTATATGCTCTTCAACCT+AGG + chr3.4:98181759-98181778 MS.gene064789:intron 35.0%
CCTAGCTTAAAGGTAAAAGT+TGG + chr3.4:98183273-98183292 MS.gene064789:intron 35.0%
CCTCTGTTTATAATGAGTCA+GGG - chr3.4:98180476-98180495 None:intergenic 35.0%
CCTGACTCATTATAAACAGA+GGG + chr3.4:98180474-98180493 MS.gene064789:intron 35.0%
CTCATTATAAACAGAGGGAT+TGG + chr3.4:98180479-98180498 MS.gene064789:intron 35.0%
GAAAATTGAGACTCGATAGT+TGG + chr3.4:98179980-98179999 MS.gene064789:CDS 35.0%
GAACTGACCACAAATAAACA+AGG - chr3.4:98180567-98180586 None:intergenic 35.0%
GAAGTCATAGATTCAAGTCA+TGG - chr3.4:98180741-98180760 None:intergenic 35.0%
GAATGTTCATCCTGATATCA+AGG - chr3.4:98182153-98182172 None:intergenic 35.0%
GCCTTAAATGTCCTAAGTAA+TGG - chr3.4:98180934-98180953 None:intergenic 35.0%
GTATGAGAATGAGTGTTTGA+TGG + chr3.4:98183490-98183509 MS.gene064789:intron 35.0%
GTTGTAAGTGAGAGAACTAA+AGG + chr3.4:98183001-98183020 MS.gene064789:intron 35.0%
TAGTACATCTATGCAATGTC+CGG - chr3.4:98183070-98183089 None:intergenic 35.0%
TGAGATCAAATGTACGATTG+CGG + chr3.4:98181352-98181371 MS.gene064789:CDS 35.0%
TTACAGATGTAGTCTCAACT+AGG - chr3.4:98180872-98180891 None:intergenic 35.0%
TTAGCGTTCAAGCAATAGAT+GGG + chr3.4:98183605-98183624 MS.gene064789:intron 35.0%
TTCGATGATTCAAACTCCAA+CGG + chr3.4:98179889-98179908 MS.gene064789:CDS 35.0%
TTTACCATCGGAGTAAAACA+TGG + chr3.4:98183030-98183049 MS.gene064789:intron 35.0%
TTTCTTTCAATGTCAGAGCT+GGG + chr3.4:98181327-98181346 MS.gene064789:CDS 35.0%
! AAAAAGGTACAACTCAAGCT+AGG + chr3.4:98183437-98183456 MS.gene064789:intron 35.0%
! AAAAGGTACAACTCAAGCTA+GGG + chr3.4:98183438-98183457 MS.gene064789:intron 35.0%
! ACAACAAGATTATGCCACTT+AGG - chr3.4:98182986-98183005 None:intergenic 35.0%
! AGCCTCATAAACATGGATTT+TGG + chr3.4:98180267-98180286 MS.gene064789:intron 35.0%
! AGTAATTGAGATACTTGCTG+GGG + chr3.4:98182881-98182900 MS.gene064789:CDS 35.0%
! CCAACTTTTACCTTTAAGCT+AGG - chr3.4:98183276-98183295 None:intergenic 35.0%
! CCATGTCAGAAATTTTCAGA+AGG + chr3.4:98181698-98181717 MS.gene064789:intron 35.0%
! CCTTCTGAAAATTTCTGACA+TGG - chr3.4:98181701-98181720 None:intergenic 35.0%
! TTTCACAGAATTGACTAGTC+CGG - chr3.4:98182325-98182344 None:intergenic 35.0%
!! ACTAGGAGATTATTTCTGCA+AGG - chr3.4:98180855-98180874 None:intergenic 35.0%
!! ATATCCAGAGGTATGTTTTC+CGG - chr3.4:98181401-98181420 None:intergenic 35.0%
!!! AACATGGATTTTGGTTGGTT+AGG + chr3.4:98180276-98180295 MS.gene064789:intron 35.0%
!!! AGATAGTGCGACACTTTTTT+TGG + chr3.4:98181541-98181560 MS.gene064789:intron 35.0%
!!! AGCTAGGGTTTTTTCTTCTT+TGG - chr3.4:98183260-98183279 None:intergenic 35.0%
AACACCACAAAATCCACATG+AGG - chr3.4:98179779-98179798 None:intergenic 40.0%
AAGAATGGAAGTCTTGCAGT+TGG - chr3.4:98180796-98180815 None:intergenic 40.0%
ACATCTTAGAGCAAGTGGTT+CGG - chr3.4:98181479-98181498 None:intergenic 40.0%
ACTGTACAATAGACCCACAA+TGG - chr3.4:98180690-98180709 None:intergenic 40.0%
AGTCACTAACTGCAACAAGA+TGG - chr3.4:98180901-98180920 None:intergenic 40.0%
AGTTAAATGGACCACACAGA+AGG - chr3.4:98182544-98182563 None:intergenic 40.0%
AGTTGAAAATCCCTTCTGTG+TGG + chr3.4:98182530-98182549 MS.gene064789:intron 40.0%
ATAGCTCTTGTCTGAGTCTA+GGG + chr3.4:98180660-98180679 MS.gene064789:intron 40.0%
ATCATACGAAGCCGGTTATT+AGG - chr3.4:98182294-98182313 None:intergenic 40.0%
CCACTTTATTCTGTAGTGCT+AGG + chr3.4:98181647-98181666 MS.gene064789:intron 40.0%
CCCTCTGTTTATAATGAGTC+AGG - chr3.4:98180477-98180496 None:intergenic 40.0%
CCCTGACTCATTATAAACAG+AGG + chr3.4:98180473-98180492 MS.gene064789:intron 40.0%
CCTAGCACTACAGAATAAAG+TGG - chr3.4:98181650-98181669 None:intergenic 40.0%
CCTCCTTTCTCTTCTAAATG+CGG + chr3.4:98180237-98180256 MS.gene064789:intron 40.0%
CTAATCTGTGTACAATCCCT+GGG - chr3.4:98181984-98182003 None:intergenic 40.0%
CTACTGTACAATTATGCAGG+TGG - chr3.4:98181523-98181542 None:intergenic 40.0%
CTCCTTTCTCTTCTAAATGC+GGG + chr3.4:98180238-98180257 MS.gene064789:intron 40.0%
GAACCAAAAACGAATTACGC+CGG + chr3.4:98179913-98179932 MS.gene064789:CDS 40.0%
GAATCTCAACCTAGATCGTT+TGG + chr3.4:98183649-98183668 MS.gene064789:intron 40.0%
GAGAGTCGAGAGGAAATAAA+TGG + chr3.4:98183154-98183173 MS.gene064789:intron 40.0%
GCAAGGAAAGACTTCCAATT+TGG - chr3.4:98180838-98180857 None:intergenic 40.0%
GCAATGGGAGAGAAGTAAAA+TGG - chr3.4:98179850-98179869 None:intergenic 40.0%
GCACTACAGAATAAAGTGGT+TGG - chr3.4:98181646-98181665 None:intergenic 40.0%
GCATATCATCTGGAGAAGAA+GGG + chr3.4:98180311-98180330 MS.gene064789:intron 40.0%
GTCCAGTCAAGTATTAAAGC+TGG + chr3.4:98180039-98180058 MS.gene064789:CDS 40.0%
GTCGAGAGGAAATAAATGGA+AGG + chr3.4:98183158-98183177 MS.gene064789:intron 40.0%
GTTAAATGGACCACACAGAA+GGG - chr3.4:98182543-98182562 None:intergenic 40.0%
GTTAGCGTTCAAGCAATAGA+TGG + chr3.4:98183604-98183623 MS.gene064789:intron 40.0%
GTTGGTTAGGAAGATCTAGA+GGG + chr3.4:98180289-98180308 MS.gene064789:intron 40.0%
GTTTCTTTCAATGTCAGAGC+TGG + chr3.4:98181326-98181345 MS.gene064789:CDS 40.0%
TAAATGGAAGGTTAGAGACG+TGG + chr3.4:98183170-98183189 MS.gene064789:intron 40.0%
TACCCGCATTTAGAAGAGAA+AGG - chr3.4:98180243-98180262 None:intergenic 40.0%
TAGGTGATGAGGTATATGGA+GGG + chr3.4:98184070-98184089 MS.gene064789:CDS 40.0%
TATAGCTCTTGTCTGAGTCT+AGG + chr3.4:98180659-98180678 MS.gene064789:intron 40.0%
TCTAATCTGTGTACAATCCC+TGG - chr3.4:98181985-98182004 None:intergenic 40.0%
TGAGACTACATCTGTAATGC+TGG + chr3.4:98180875-98180894 MS.gene064789:intron 40.0%
TTATCGCTTAACACCTCATG+TGG + chr3.4:98179763-98179782 MS.gene064789:CDS 40.0%
TTCAAGGAAGGTGGTTGAAA+TGG + chr3.4:98183387-98183406 MS.gene064789:intron 40.0%
TTCTTTCAATGTCAGAGCTG+GGG + chr3.4:98181328-98181347 MS.gene064789:CDS 40.0%
TTGGAAGAAATTGTCGACGA+TGG + chr3.4:98179943-98179962 MS.gene064789:CDS 40.0%
TTTAGATGAGAAAGGGCAAC+AGG + chr3.4:98180611-98180630 MS.gene064789:intron 40.0%
! AAAAGCATGCTGCAAAGTGT+TGG - chr3.4:98183111-98183130 None:intergenic 40.0%
! AACACCTCATGTGGATTTTG+TGG + chr3.4:98179772-98179791 MS.gene064789:CDS 40.0%
! AGTAGAAACGGATTTCGCAA+TGG - chr3.4:98179866-98179885 None:intergenic 40.0%
! GTAATTGAGATACTTGCTGG+GGG + chr3.4:98182882-98182901 MS.gene064789:CDS 40.0%
! GTAGAAACGGATTTCGCAAT+GGG - chr3.4:98179865-98179884 None:intergenic 40.0%
! GTCAGGGACTAATTTGTACT+CGG - chr3.4:98180460-98180479 None:intergenic 40.0%
! GTCCAGCTTTAATACTTGAC+TGG - chr3.4:98180044-98180063 None:intergenic 40.0%
! TAGATCAAGTGTTGTGCTGA+AGG + chr3.4:98181011-98181030 MS.gene064789:intron 40.0%
! TTGGAATGCTTTTGTTGCTG+TGG - chr3.4:98179803-98179822 None:intergenic 40.0%
!! AGACCAAGTCTTATTCCACT+AGG - chr3.4:98183882-98183901 None:intergenic 40.0%
!! CAAGTCTTATTCCACTAGGT+GGG - chr3.4:98183878-98183897 None:intergenic 40.0%
!! GGCATGCTTTAGAATCATCT+TGG - chr3.4:98181095-98181114 None:intergenic 40.0%
!! TAAAGGGTGCTGTTTACCAT+CGG + chr3.4:98183018-98183037 MS.gene064789:intron 40.0%
!!! ATTCGTTTTTGGTTCTCCGT+TGG - chr3.4:98179908-98179927 None:intergenic 40.0%
!!! GGCTGGTTTTAATGTGTATG+TGG + chr3.4:98180359-98180378 MS.gene064789:intron 40.0%
AAGGAAGGTGGTTGAAATGG+AGG + chr3.4:98183390-98183409 MS.gene064789:intron 45.0%
AAGGTGGTTGAAATGGAGGA+GGG + chr3.4:98183394-98183413 MS.gene064789:intron 45.0%
ACATTAAAACCAGCCTGCCT+AGG - chr3.4:98180354-98180373 None:intergenic 45.0%
ACCCTTCAGAAGAACTTGAC+TGG - chr3.4:98181930-98181949 None:intergenic 45.0%
AGAGTCAAAGCATGAAGGCA+AGG - chr3.4:98184186-98184205 None:intergenic 45.0%
AGGTTTCAGCATCCTCATAC+AGG + chr3.4:98184316-98184335 MS.gene064789:intron 45.0%
AGTTGTGCAGTGTGCACTAA+CGG - chr3.4:98180511-98180530 None:intergenic 45.0%
ATATGGAGGGACGAAAAGCA+TGG + chr3.4:98184083-98184102 MS.gene064789:CDS 45.0%
ATGTTGTCAATCCCACCTAG+TGG + chr3.4:98183864-98183883 MS.gene064789:intron 45.0%
CAACATTTGGCAGGTTGCAA+TGG - chr3.4:98181840-98181859 None:intergenic 45.0%
CAAGCTACGCACTATCAAGA+GGG + chr3.4:98182197-98182216 MS.gene064789:CDS 45.0%
CACACATGACCAAACGATCT+AGG - chr3.4:98183661-98183680 None:intergenic 45.0%
CACTACCAATTCTACGAAGC+TGG - chr3.4:98184396-98184415 None:intergenic 45.0%
CATTGTGGTGATACTTGAGC+AGG + chr3.4:98181304-98181323 MS.gene064789:intron 45.0%
CCACCTAGTGGAATAAGACT+TGG + chr3.4:98183876-98183895 MS.gene064789:intron 45.0%
CCCAGTCAAGTTCTTCTGAA+GGG + chr3.4:98181926-98181945 MS.gene064789:CDS 45.0%
CCCTTCAGAAGAACTTGACT+GGG - chr3.4:98181929-98181948 None:intergenic 45.0%
CCGCATTTAGAAGAGAAAGG+AGG - chr3.4:98180240-98180259 None:intergenic 45.0%
CTAGATCGTTTGGTCATGTG+TGG + chr3.4:98183659-98183678 MS.gene064789:intron 45.0%
CTAGGTGATGAGGTATATGG+AGG + chr3.4:98184069-98184088 MS.gene064789:CDS 45.0%
CTGCTAGGTGATGAGGTATA+TGG + chr3.4:98184066-98184085 MS.gene064789:CDS 45.0%
CTGGAGAAGAAGGGTTAAGT+TGG + chr3.4:98180320-98180339 MS.gene064789:intron 45.0%
CTTGCAGTTGGCAAAGTGAT+AGG - chr3.4:98180784-98180803 None:intergenic 45.0%
GAAGAAATTGTCGACGATGG+TGG + chr3.4:98179946-98179965 MS.gene064789:CDS 45.0%
GAAGCCGGTTATTAGGATCA+CGG - chr3.4:98182287-98182306 None:intergenic 45.0%
GGCATATCATCTGGAGAAGA+AGG + chr3.4:98180310-98180329 MS.gene064789:intron 45.0%
GGTTTCAGCATCCTCATACA+GGG + chr3.4:98184317-98184336 MS.gene064789:intron 45.0%
GTAACCCAGCCTCATAAACA+TGG + chr3.4:98180260-98180279 MS.gene064789:intron 45.0%
GTTGAGTGGAAGTTGGAAAC+TGG + chr3.4:98182918-98182937 MS.gene064789:CDS 45.0%
GTTTCAGCATCCTCATACAG+GGG + chr3.4:98184318-98184337 MS.gene064789:CDS 45.0%
TATACCTCATCACCTAGCAG+AGG - chr3.4:98184066-98184085 None:intergenic 45.0%
TATTTGGGTGTACCTCTGCT+AGG + chr3.4:98184051-98184070 MS.gene064789:CDS 45.0%
TCAAGCTACGCACTATCAAG+AGG + chr3.4:98182196-98182215 MS.gene064789:CDS 45.0%
TCCCAGTCAAGTTCTTCTGA+AGG + chr3.4:98181925-98181944 MS.gene064789:CDS 45.0%
TGAGTGCAAACTATGGAGCA+TGG - chr3.4:98182616-98182635 None:intergenic 45.0%
TGCCTTCATGCTTTGACTCT+CGG + chr3.4:98184186-98184205 MS.gene064789:CDS 45.0%
TGCGGCTAGTAGGTGATTTA+TGG + chr3.4:98182353-98182372 MS.gene064789:intron 45.0%
TGGATCTCTTCTCGCATCAA+TGG + chr3.4:98180000-98180019 MS.gene064789:CDS 45.0%
TGGGTTACTAGTTGTCGCTA+AGG + chr3.4:98182017-98182036 MS.gene064789:CDS 45.0%
TTATTAGGATCACGGCCAAC+AGG - chr3.4:98182279-98182298 None:intergenic 45.0%
TTCGGAATTACCATGTGAGC+AGG - chr3.4:98181461-98181480 None:intergenic 45.0%
TTGAGCCAGCTTCGTAGAAT+TGG + chr3.4:98184388-98184407 MS.gene064789:CDS 45.0%
TTGGCCGTGATCCTAATAAC+CGG + chr3.4:98182280-98182299 MS.gene064789:CDS 45.0%
! ACGTCTGGGACACTTGTAAA+TGG + chr3.4:98181805-98181824 MS.gene064789:CDS 45.0%
! AGATTAGACAAAGGCACGAG+TGG + chr3.4:98181997-98182016 MS.gene064789:CDS 45.0%
! AGTCTAGGGCAAACCATTGT+GGG + chr3.4:98180674-98180693 MS.gene064789:intron 45.0%
! CAATGGCCGTGTTGTTGATA+AGG + chr3.4:98180074-98180093 MS.gene064789:CDS 45.0%
! CAGAGGTACACCCAAATACT+TGG - chr3.4:98184049-98184068 None:intergenic 45.0%
! GATCTAGAGGGCATATCATC+TGG + chr3.4:98180301-98180320 MS.gene064789:intron 45.0%
! GATTAGACAAAGGCACGAGT+GGG + chr3.4:98181998-98182017 MS.gene064789:CDS 45.0%
! GGTTGGTTAGGAAGATCTAG+AGG + chr3.4:98180288-98180307 MS.gene064789:intron 45.0%
! GGTTTGGTTCATTGTCGTGT+AGG + chr3.4:98184296-98184315 MS.gene064789:intron 45.0%
! TCGACCATGTTTTACTCCGA+TGG - chr3.4:98183037-98183056 None:intergenic 45.0%
!! CCAAGTCTTATTCCACTAGG+TGG - chr3.4:98183879-98183898 None:intergenic 45.0%
!! GACGATGGTGGAATCAAATC+TGG + chr3.4:98179958-98179977 MS.gene064789:CDS 45.0%
!! GCATGGTCTTGTCATTGCTA+CGG + chr3.4:98184100-98184119 MS.gene064789:CDS 45.0%
!! TGCATTGGTTGAGTGGAAGT+TGG + chr3.4:98182911-98182930 MS.gene064789:CDS 45.0%
!! TTAAGTTGGCATGCCAACCT+AGG + chr3.4:98180334-98180353 MS.gene064789:intron 45.0%
AATTTCTTCCAACCGCACGC+CGG - chr3.4:98179935-98179954 None:intergenic 50.0%
ACACGTCCAGAAACTGGAGT+AGG - chr3.4:98182249-98182268 None:intergenic 50.0%
ACCCGAGAGTCAAAGCATGA+AGG - chr3.4:98184191-98184210 None:intergenic 50.0%
ACCTCAACACGTCCAGAAAC+TGG - chr3.4:98182255-98182274 None:intergenic 50.0%
AGAAACTGGAGTAGGTACCC+CGG - chr3.4:98182241-98182260 None:intergenic 50.0%
ATCACCTACTAGCCGCATGA+CGG - chr3.4:98182350-98182369 None:intergenic 50.0%
ATCTATGCAATGTCCGGCCA+TGG - chr3.4:98183064-98183083 None:intergenic 50.0%
ATGAGAAAGGGCAACAGGCA+AGG + chr3.4:98180616-98180635 MS.gene064789:intron 50.0%
CATGGTCGAATTTCCATGGC+CGG + chr3.4:98183048-98183067 MS.gene064789:intron 50.0%
CGTGCGCATGCCAAGTATTT+GGG + chr3.4:98184036-98184055 MS.gene064789:CDS 50.0%
CTACAGCGATCATACGAAGC+CGG - chr3.4:98182302-98182321 None:intergenic 50.0%
CTATGGCATCAATTCGCCCA+GGG + chr3.4:98181965-98181984 MS.gene064789:CDS 50.0%
CTTCGTATGATCGCTGTAGC+CGG + chr3.4:98182303-98182322 MS.gene064789:CDS 50.0%
GAAGGTGGTTGAAATGGAGG+AGG + chr3.4:98183393-98183412 MS.gene064789:intron 50.0%
GACAAGAGCTATACAGCACC+AGG - chr3.4:98180652-98180671 None:intergenic 50.0%
GATCGTTTGGTCATGTGTGG+AGG + chr3.4:98183662-98183681 MS.gene064789:intron 50.0%
GCCTTCATGCTTTGACTCTC+GGG + chr3.4:98184187-98184206 MS.gene064789:CDS 50.0%
GCTGGACTCGTTCATGTCAA+TGG + chr3.4:98180057-98180076 MS.gene064789:CDS 50.0%
TAAAACCAGCCTGCCTAGGT+TGG - chr3.4:98180350-98180369 None:intergenic 50.0%
TCGTGCGCATGCCAAGTATT+TGG + chr3.4:98184035-98184054 MS.gene064789:CDS 50.0%
TCTATGGCATCAATTCGCCC+AGG + chr3.4:98181964-98181983 MS.gene064789:CDS 50.0%
TGCAAACTCGGAGTTGTTCG+TGG - chr3.4:98184126-98184145 None:intergenic 50.0%
TGTACCTCTGCTAGGTGATG+AGG + chr3.4:98184059-98184078 MS.gene064789:CDS 50.0%
TGTGCCGGAAAACATACCTC+TGG + chr3.4:98181394-98181413 MS.gene064789:CDS 50.0%
TTCTGTGAAAGCCCGTCATG+CGG + chr3.4:98182335-98182354 MS.gene064789:CDS 50.0%
TTCTTAGGTGGAGAGTCGAG+AGG + chr3.4:98183144-98183163 MS.gene064789:intron 50.0%
! ACGCCGGCGTAATTCGTTTT+TGG - chr3.4:98179919-98179938 None:intergenic 50.0%
! GAGTCTAGGGCAAACCATTG+TGG + chr3.4:98180673-98180692 MS.gene064789:intron 50.0%
! GTCTACGTTAGTCTCACTGC+CGG + chr3.4:98182219-98182238 MS.gene064789:CDS 50.0%
! TCCAGTTTCTGGACGTGTTG+AGG + chr3.4:98182251-98182270 MS.gene064789:CDS 50.0%
! TCTACGTTAGTCTCACTGCC+GGG + chr3.4:98182220-98182239 MS.gene064789:CDS 50.0%
!! GTAGCTGTGCATTGGTTGAG+TGG + chr3.4:98182904-98182923 MS.gene064789:CDS 50.0%
AAACGAATTACGCCGGCGTG+CGG + chr3.4:98179920-98179939 MS.gene064789:CDS 55.0%
AGTGTCCCAGACGTATTGCC+AGG - chr3.4:98181799-98181818 None:intergenic 55.0%
CAGCACCTGGCAATACGTCT+GGG + chr3.4:98181791-98181810 MS.gene064789:CDS 55.0%
GGAAACTGGACGCACTCATC+AGG + chr3.4:98182932-98182951 MS.gene064789:CDS 55.0%
GGACGTGTTGAGGTTCCTGT+TGG + chr3.4:98182261-98182280 MS.gene064789:CDS 55.0%
TAGGTTGTGCATCCAGCACC+TGG + chr3.4:98181778-98181797 MS.gene064789:intron 55.0%
TCACCTACTAGCCGCATGAC+GGG - chr3.4:98182349-98182368 None:intergenic 55.0%
! CTACGTTAGTCTCACTGCCG+GGG + chr3.4:98182221-98182240 MS.gene064789:CDS 55.0%
! GGGGTACCTACTCCAGTTTC+TGG + chr3.4:98182240-98182259 MS.gene064789:CDS 55.0%
!! AGGTGCTGGATGCACAACCT+AGG - chr3.4:98181779-98181798 None:intergenic 55.0%
AAGCCCGTCATGCGGCTAGT+AGG + chr3.4:98182343-98182362 MS.gene064789:CDS 60.0%
AGGCAAGGCAACAGGCAACC+TGG + chr3.4:98180631-98180650 MS.gene064789:intron 60.0%
AGGGCAACAGGCAAGGCAAC+AGG + chr3.4:98180623-98180642 MS.gene064789:intron 60.0%
CCAGACGTATTGCCAGGTGC+TGG - chr3.4:98181793-98181812 None:intergenic 60.0%
CCAGCACCTGGCAATACGTC+TGG + chr3.4:98181790-98181809 MS.gene064789:CDS 60.0%
GCAGCAGTTGAGAGCTGTGC+CGG + chr3.4:98181379-98181398 MS.gene064789:CDS 60.0%
GCATCCTCATACAGGGGAGC+AGG + chr3.4:98184324-98184343 MS.gene064789:CDS 60.0%
GTTGGCATGCCAACCTAGGC+AGG + chr3.4:98180338-98180357 MS.gene064789:intron 60.0%
TGCACCTGCTCCCCTGTATG+AGG - chr3.4:98184331-98184350 None:intergenic 60.0%
TGCTGGGGGTAGCTGTGCAT+TGG + chr3.4:98182896-98182915 MS.gene064789:CDS 60.0%
GAATTACGCCGGCGTGCGGT+TGG + chr3.4:98179924-98179943 MS.gene064789:CDS 65.0%
GCATGCCAACCTAGGCAGGC+TGG + chr3.4:98180342-98180361 MS.gene064789:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 98179760 98184462 98179760 ID=MS.gene064789
chr3.4 mRNA 98179760 98184462 98179760 ID=MS.gene064789.t1;Parent=MS.gene064789
chr3.4 exon 98179760 98180095 98179760 ID=MS.gene064789.t1.exon1;Parent=MS.gene064789.t1
chr3.4 CDS 98179760 98180095 98179760 ID=cds.MS.gene064789.t1;Parent=MS.gene064789.t1
chr3.4 exon 98181326 98181469 98181326 ID=MS.gene064789.t1.exon2;Parent=MS.gene064789.t1
chr3.4 CDS 98181326 98181469 98181326 ID=cds.MS.gene064789.t1;Parent=MS.gene064789.t1
chr3.4 exon 98181781 98182038 98181781 ID=MS.gene064789.t1.exon3;Parent=MS.gene064789.t1
chr3.4 CDS 98181781 98182038 98181781 ID=cds.MS.gene064789.t1;Parent=MS.gene064789.t1
chr3.4 exon 98182162 98182364 98182162 ID=MS.gene064789.t1.exon4;Parent=MS.gene064789.t1
chr3.4 CDS 98182162 98182364 98182162 ID=cds.MS.gene064789.t1;Parent=MS.gene064789.t1
chr3.4 exon 98182875 98182953 98182875 ID=MS.gene064789.t1.exon5;Parent=MS.gene064789.t1
chr3.4 CDS 98182875 98182953 98182875 ID=cds.MS.gene064789.t1;Parent=MS.gene064789.t1
chr3.4 exon 98184033 98184208 98184033 ID=MS.gene064789.t1.exon6;Parent=MS.gene064789.t1
chr3.4 CDS 98184033 98184208 98184033 ID=cds.MS.gene064789.t1;Parent=MS.gene064789.t1
chr3.4 exon 98184318 98184462 98184318 ID=MS.gene064789.t1.exon7;Parent=MS.gene064789.t1
chr3.4 CDS 98184318 98184462 98184318 ID=cds.MS.gene064789.t1;Parent=MS.gene064789.t1
Gene Sequence

>MS.gene064789

ATGTTATCGCTTAACACCTCATGTGGATTTTGTGGTGTTTCCACAGCAACAAAAGCATTCCAATTTCACTTTAGAACTTCAACTTCACCATTTTACTTCTCTCCCATTGCGAAATCCGTTTCTACTTTCTTCGATGATTCAAACTCCAACGGAGAACCAAAAACGAATTACGCCGGCGTGCGGTTGGAAGAAATTGTCGACGATGGTGGAATCAAATCTGGAAAATTGAGACTCGATAGTTGGATCTCTTCTCGCATCAATGGCATCAGTAGAGCTCGTGTCCAGTCAAGTATTAAAGCTGGACTCGTTCATGTCAATGGCCGTGTTGTTGATAAGGTAGTCTTAAACTCTATTTTCCATTTCAACTGTTCCGAATTTGTGTCTACAAGTTCTCTAATTACTACGAATTTTCTATTTGGTAAAGTGTAAACTAAAGCTGCAGTAGTAGTAGTAGTAGTAGTAAGTAATTCTTAGCGACCTCCTTTCTCTTCTAAATGCGGGTAACCCAGCCTCATAAACATGGATTTTGGTTGGTTAGGAAGATCTAGAGGGCATATCATCTGGAGAAGAAGGGTTAAGTTGGCATGCCAACCTAGGCAGGCTGGTTTTAATGTGTATGTGGCCTTCTATTAGTTAACTCATCACTTAACAGAGATCCATTAATATCAATGGCCAAAAGTGACTTCACAATTTTATACCGAGTACAAATTAGTCCCTGACTCATTATAAACAGAGGGATTGGAATTAACCGTTAGTGCACACTGCACAACTATAAATCCAGATCATTCAATCTTGGAATATATCCCTTGTTTATTTGTGGTCAGTTCATGAAAGTGAAAATATTTCGAATATTTAGATGAGAAAGGGCAACAGGCAAGGCAACAGGCAACCTGGTGCTGTATAGCTCTTGTCTGAGTCTAGGGCAAACCATTGTGGGTCTATTGTACAGTCATATATTGCATTTGCAAGAGGTTAATTCCATGACTTGAATCTATGACTTCTTAGTTACACAATGACGATTCCTATCACTTTGCCAACTGCAAGACTTCCATTCTTGAATGTTTAAATGATGCACCCAAATTGGAAGTCTTTCCTTGCAGAAATAATCTCCTAGTTGAGACTACATCTGTAATGCTGGCCATCTTGTTGCAGTTAGTGACTTTGAGAACTACCATTACTTAGGACATTTAAGGCATTAAGACATTAATCATTATCAAATATTCTGAGTATAATAGTGGCTCTTAGTGTTTGTAGATCAAGTGTTGTGCTGAAGGATTCATGTTTTTCTAATTCCACAATACTTGTTCGAAAAGTAAAAAATGATATATGATTCCAAGATGATTCTAAAGCATGCCCTAGACCTAGAATATATTTATGTATCCCAGTTTTTTGTTTGGTTATTTCATCAATTGGAGCATCAATCAGAACATTATGATTCACTGAAATGTGAAACCTCTTGTTTGCAAATCATAAATATTTTCATTCTAAATTAATTAGGTTCTTTAAGGTGTCTATAGTTGTTCCTTTCTTAATTTGTAGTTGAGCATTGTGGTGATACTTGAGCAGGTTTCTTTCAATGTCAGAGCTGGGGATGAGATCAAATGTACGATTGCGGAGTTGCAGCAGTTGAGAGCTGTGCCGGAAAACATACCTCTGGATATAGTTTATGAAGATGACCATTTGCTAGTCATAAATAAACCTGCTCACATGGTAATTCCGAACCACTTGCTCTAAGATGTTATTTTTAAATCTTGCATGATCCACCTGCATAATTGTACAGTAGATAGTGCGACACTTTTTTTGGTTTATAAATTGATTTCTCTTGATTTTTAAACTATCATAAGTTCAATACTTGATGATTAAATTCAGGCTGTTTGAACTAACCAACCACTTTATTCTGTAGTGCTAGGAGCTATTTTTTTTAAAATTGAGTTCTAACCATGTCAGAAATTTTCAGAAGGAAAAGGGAAACTAACTCAATATTGATATTGACAAATGTCATTATATGCTCTTCAACCTAGGTTGTGCATCCAGCACCTGGCAATACGTCTGGGACACTTGTAAATGGCATTCTGCACCATTGCAACCTGCCAAATGTTGAATTTTCTAAAGAGGAAGCTCTTTCAGATACAGAAGAATCTGATGATGAACTTAATGGTTTCTCATCCCAGTCAAGTTCTTCTGAAGGGTTAGATTCTAGATTGTCTATGGCATCAATTCGCCCAGGGATTGTACACAGATTAGACAAAGGCACGAGTGGGTTACTAGTTGTCGCTAAGGTGCTTTTACATTTTCTCATTACTTGTCACAAGTGTCAAATTTCAATGAAGAATGAAATTCTTCTGACACTTCAGAATATTAACACTCATCTAACACCCAGTATTTGTATGCCTTGATATCAGGATGAACATTCTCATATGAAATTGTCTGAACAATTCAAGCTACGCACTATCAAGAGGGTCTACGTTAGTCTCACTGCCGGGGTACCTACTCCAGTTTCTGGACGTGTTGAGGTTCCTGTTGGCCGTGATCCTAATAACCGGCTTCGTATGATCGCTGTAGCCGGACTAGTCAATTCTGTGAAAGCCCGTCATGCGGCTAGTAGGTGATTTATGGTACTTTTACACTTCATTTATTATTAGTTATTTACTAATATTGAATTATATTAGGTGCTTTTGGTCATATTTGACTATTGAAAAATTGACAATGCATCAACTAAAAATATAAACATAAATGTGTATTTTCCAACATTTGTGTACACATTTATATGAGTTGAAAATCCCTTCTGTGTGGTCCATTTAACTTTTAACCTGTAGGTCATTAGCTTATAAAAACTTCTTAGTTAAAATAAGTCCATGCTCCATAGTTTGCACTCACTTAAAATTTCTTATCAGCTTGCAGATGATTATATAAAATTAATAAGAACTGAAAAATTAGAAATGCAAAAACTAATTTAAATTTAGAGAAGATGTTTTAAAAATTCATAGCCATTGCAAAATATATGTAATATTACATATTACATTTGGGATGTTTTTTGAGAAGTTTATTCAAAAAGGTTTTATATCAACTGCTTAATGGCTTTCTATTCATCTAAAAGTTGATTACTATCTGTCAGGTACAAAGTAATTGAGATACTTGCTGGGGGTAGCTGTGCATTGGTTGAGTGGAAGTTGGAAACTGGACGCACTCATCAGGTACATATCTTTAGAAACTTTAGAGAAATCCTAAGTGGCATAATCTTGTTGTAAGTGAGAGAACTAAAGGGTGCTGTTTACCATCGGAGTAAAACATGGTCGAATTTCCATGGCCGGACATTGCATAGATGTACTAACGGAGCATATTTAAGAGCCAACACTTTGCAGCATGCTTTTTACATATAATGTATTCTTAGGTGGAGAGTCGAGAGGAAATAAATGGAAGGTTAGAGACGTGGAGACAAGCTTTATAAGATAACTTTTGTTTGAATGGACCTAAGATATAATATATGAAAACTTTAGCCAAAGAAGAAAAAACCCTAGCTTAAAGGTAAAAGTTGGAAACCATACAATACCACAAGTTACATAGTTTAAACATCTTAGGTCAAATGTTAAAAAAGATGGAGAAACAGAGGGAAATGTAAACATTTGATTCAAGGAAGGTGGTTGAAATGGAGGAGGGCCTCAAGTGTTTCATGTAATAAAAAGGTACAACTCAAGCTAGGGAACATTTTATCGATCAACTATAATATATTGTATGAGAATGAGTGTTTGATGGTGAAAACAAACATGAGAATGAACTCACTATAGTAGAGATGAAAATGATGCGCTGAATGAGTGAAAATACTACACGGGATATGATTAGGAATGTTAGCGTTCAAGCAATAGATGGGTCTATTGTGTAAAAATTGGCTGAATCTCAACCTAGATCGTTTGGTCATGTGTGGAGGAGACCTAAAAGTTCCTTAGTAAGAAAGGTAGATTAGATCAAGGACCATTCAATCACTAAAGGCAAAAGAAGGCAAAAAATAAAATAAAAATGATCGTCAAAAATATTAAAATAGATTTAGAGGACAATGCTTTGGTTATAGTCATGATTTTTTATATAATATTATAGTGTCGTCTGATCATGTTGTCAATCCCACCTAGTGGAATAAGACTTGGTCTTAGTAGTTTTAAGAATTTATATACAAATATTTAAAATCTACAAATATATATATTTTTAAAAAATATTCCACTGTAATATAGTAAAGCCTAAACTTATAATATCTTCTAAAAAATGCACACTTGTTTTGTAGATTCGTGCGCATGCCAAGTATTTGGGTGTACCTCTGCTAGGTGATGAGGTATATGGAGGGACGAAAAGCATGGTCTTGTCATTGCTACGGCCACGAACAACTCCGAGTTTGCATAGCGAAATGTTTAAAACAGTTTCTGAGCTAGATAGGCCTTGCCTTCATGCTTTGACTCTCGGGTAACATGATAAAAGCTTTTATAACTTCGTAGCTAAACTTTGGTTCACAGTTTATATGCATAATTCATGACAATTGATAGCACTATTGGTTTGGTTCATTGTCGTGTAGGTTTCAGCATCCTCATACAGGGGAGCAGGTGCACTTTTCATGTGAGCCCCCTGTAGATTTTAATGACATTTTGAGCCAGCTTCGTAGAATTGGTAGTGAAAGTATTTCTCACTCAAAGGCCAAATTTTTAAAAGGGGTATTGTAA

Protein sequence

>MS.gene064789.t1

MLSLNTSCGFCGVSTATKAFQFHFRTSTSPFYFSPIAKSVSTFFDDSNSNGEPKTNYAGVRLEEIVDDGGIKSGKLRLDSWISSRINGISRARVQSSIKAGLVHVNGRVVDKVSFNVRAGDEIKCTIAELQQLRAVPENIPLDIVYEDDHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEALSDTEESDDELNGFSSQSSSSEGLDSRLSMASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYVSLTAGVPTPVSGRVEVPVGRDPNNRLRMIAVAGLVNSVKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHAKYLGVPLLGDEVYGGTKSMVLSLLRPRTTPSLHSEMFKTVSELDRPCLHALTLGFQHPHTGEQVHFSCEPPVDFNDILSQLRRIGSESISHSKAKFLKGVL