Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066427.t1 | XP_024627650.1 | 94.8 | 305 | 16 | 0 | 1 | 305 | 1 | 305 | 2.40E-158 | 568.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066427.t1 | Q9LMH0 | 69.6 | 303 | 87 | 3 | 1 | 303 | 1 | 298 | 7.3e-116 | 418.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066427.t1 | A0A072TQ46 | 94.8 | 305 | 16 | 0 | 1 | 305 | 1 | 305 | 1.7e-158 | 568.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene066427 | 0.809326 | 2.00E-50 | -1.69E-46 |
| MS.gene049159 | MS.gene066427 | 0.827587 | 1.44E-54 | -1.69E-46 |
| MS.gene049166 | MS.gene066427 | 0.801905 | 7.22E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene066427 | 0.810114 | 1.35E-50 | -1.69E-46 |
| MS.gene049756 | MS.gene066427 | 0.801049 | 1.08E-48 | -1.69E-46 |
| MS.gene04984 | MS.gene066427 | 0.829542 | 4.86E-55 | -1.69E-46 |
| MS.gene050084 | MS.gene066427 | 0.801086 | 1.06E-48 | -1.69E-46 |
| MS.gene050085 | MS.gene066427 | 0.82887 | 7.07E-55 | -1.69E-46 |
| MS.gene050114 | MS.gene066427 | 0.813129 | 2.99E-51 | -1.69E-46 |
| MS.gene050317 | MS.gene066427 | 0.831927 | 1.26E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene066427 | 0.815122 | 1.09E-51 | -1.69E-46 |
| MS.gene050737 | MS.gene066427 | 0.811759 | 5.96E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene066427 | 0.848325 | 6.59E-60 | -1.69E-46 |
| MS.gene051003 | MS.gene066427 | 0.809825 | 1.56E-50 | -1.69E-46 |
| MS.gene051184 | MS.gene066427 | 0.806256 | 8.98E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene066427 | 0.81756 | 3.10E-52 | -1.69E-46 |
| MS.gene051452 | MS.gene066427 | 0.823093 | 1.67E-53 | -1.69E-46 |
| MS.gene051757 | MS.gene066427 | 0.869298 | 3.44E-66 | -1.69E-46 |
| MS.gene051831 | MS.gene066427 | 0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene051975 | MS.gene066427 | 0.810255 | 1.26E-50 | -1.69E-46 |
| MS.gene052012 | MS.gene066427 | 0.804408 | 2.19E-49 | -1.69E-46 |
| MS.gene052286 | MS.gene066427 | 0.812877 | 3.40E-51 | -1.69E-46 |
| MS.gene052426 | MS.gene066427 | 0.808462 | 3.06E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene066427 | 0.830806 | 2.39E-55 | -1.69E-46 |
| MS.gene052856 | MS.gene066427 | 0.800984 | 1.12E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene066427 | 0.804324 | 2.28E-49 | -1.69E-46 |
| MS.gene053381 | MS.gene066427 | 0.831898 | 1.29E-55 | -1.69E-46 |
| MS.gene054823 | MS.gene066427 | 0.813979 | 1.95E-51 | -1.69E-46 |
| MS.gene05510 | MS.gene066427 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene066427 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene066427 | 0.818361 | 2.04E-52 | -1.69E-46 |
| MS.gene055441 | MS.gene066427 | 0.81195 | 5.42E-51 | -1.69E-46 |
| MS.gene055623 | MS.gene066427 | 0.83618 | 1.09E-56 | -1.69E-46 |
| MS.gene056181 | MS.gene066427 | 0.806641 | 7.45E-50 | -1.69E-46 |
| MS.gene056760 | MS.gene066427 | 0.810801 | 9.62E-51 | -1.69E-46 |
| MS.gene056787 | MS.gene066427 | 0.865879 | 4.29E-65 | -1.69E-46 |
| MS.gene056849 | MS.gene066427 | 0.832796 | 7.71E-56 | -1.69E-46 |
| MS.gene056986 | MS.gene066427 | 0.808705 | 2.72E-50 | -1.69E-46 |
| MS.gene057055 | MS.gene066427 | 0.804827 | 1.79E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene066427 | 0.826724 | 2.32E-54 | -1.69E-46 |
| MS.gene057234 | MS.gene066427 | 0.800659 | 1.30E-48 | -1.69E-46 |
| MS.gene057360 | MS.gene066427 | 0.821559 | 3.79E-53 | -1.69E-46 |
| MS.gene058054 | MS.gene066427 | 0.804612 | 1.99E-49 | -1.69E-46 |
| MS.gene058055 | MS.gene066427 | 0.810076 | 1.38E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene066427 | 0.816992 | 4.15E-52 | -1.69E-46 |
| MS.gene058238 | MS.gene066427 | 0.801546 | 8.56E-49 | -1.69E-46 |
| MS.gene058278 | MS.gene066427 | 0.813277 | 2.78E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene066427 | 0.808672 | 2.76E-50 | -1.69E-46 |
| MS.gene058646 | MS.gene066427 | 0.821631 | 3.64E-53 | -1.69E-46 |
| MS.gene058654 | MS.gene066427 | 0.825759 | 3.93E-54 | -1.69E-46 |
| MS.gene058758 | MS.gene066427 | 0.815245 | 1.02E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene066427 | 0.813303 | 2.74E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene066427 | 0.816593 | 5.11E-52 | -1.69E-46 |
| MS.gene059290 | MS.gene066427 | 0.812981 | 3.23E-51 | -1.69E-46 |
| MS.gene059360 | MS.gene066427 | 0.82754 | 1.48E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene066427 | 0.811917 | 5.51E-51 | -1.69E-46 |
| MS.gene059830 | MS.gene066427 | 0.80954 | 1.80E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene066427 | 0.814787 | 1.29E-51 | -1.69E-46 |
| MS.gene060084 | MS.gene066427 | 0.811608 | 6.43E-51 | -1.69E-46 |
| MS.gene06010 | MS.gene066427 | 0.859357 | 4.37E-63 | -1.69E-46 |
| MS.gene06011 | MS.gene066427 | 0.812558 | 3.99E-51 | -1.69E-46 |
| MS.gene060296 | MS.gene066427 | 0.815026 | 1.14E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene066427 | 0.817045 | 4.04E-52 | -1.69E-46 |
| MS.gene060685 | MS.gene066427 | 0.815451 | 9.19E-52 | -1.69E-46 |
| MS.gene060702 | MS.gene066427 | 0.829113 | 6.17E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene066427 | 0.801045 | 1.08E-48 | -1.69E-46 |
| MS.gene060870 | MS.gene066427 | 0.818159 | 2.27E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene066427 | 0.820503 | 6.63E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066427.t1 | MTR_8g030830 | 96.066 | 305 | 12 | 0 | 1 | 305 | 1 | 305 | 0.0 | 583 |
| MS.gene066427.t1 | MTR_8g446960 | 96.066 | 305 | 12 | 0 | 1 | 305 | 1 | 305 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066427.t1 | AT1G13870 | 70.627 | 303 | 84 | 4 | 1 | 303 | 1 | 298 | 6.99e-157 | 440 |
Find 60 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTCTTTGAATAACATTA+AGG | 0.212951 | 8.1:+72092780 | MS.gene066427:CDS |
| CGATGCAATATTTGAAGATT+TGG | 0.217452 | 8.1:+72092936 | MS.gene066427:CDS |
| AGAATTTAAGAGGAGTTCTT+AGG | 0.298956 | 8.1:+72092713 | MS.gene066427:CDS |
| CCAGCTAATGGCATTTCTAT+AGG | 0.311339 | 8.1:+72093252 | MS.gene066427:CDS |
| TGGTGTTTGGCTCGTGCTGC+AGG | 0.319369 | 8.1:+72092820 | MS.gene066427:CDS |
| TCCCATCTATTTCTTCTCTC+TGG | 0.324920 | 8.1:-72092976 | None:intergenic |
| CCGATATGAGCTATGGTGTT+TGG | 0.374786 | 8.1:+72092807 | MS.gene066427:CDS |
| TGACGATTCTTTGAGAGCTT+CGG | 0.376709 | 8.1:-72092605 | None:intergenic |
| GGCTAGACTTAGCGCAGCTT+TGG | 0.378208 | 8.1:-72092584 | None:intergenic |
| CAGCTAATGGCATTTCTATA+GGG | 0.379509 | 8.1:+72093253 | MS.gene066427:CDS |
| AGGATGATGGTTGTAGAAAA+TGG | 0.390890 | 8.1:+72092875 | MS.gene066427:CDS |
| GATTCTTTGAATAACATTAA+GGG | 0.396934 | 8.1:+72092781 | MS.gene066427:CDS |
| AACCAGAGAGAAGAAATAGA+TGG | 0.404380 | 8.1:+72092974 | MS.gene066427:CDS |
| CTTGGTATGCTACCAGCTAA+TGG | 0.416633 | 8.1:+72093240 | MS.gene066427:CDS |
| TACTGTGATGTTGAGGATGA+TGG | 0.439873 | 8.1:+72092862 | MS.gene066427:CDS |
| CGCACATTCATGAAATTGAC+AGG | 0.447358 | 8.1:+72093339 | MS.gene066427:CDS |
| GAAGCGCAATCTCGTGATCT+TGG | 0.451998 | 8.1:+72093222 | MS.gene066427:CDS |
| ATCAATCTTTCGAGATCAGT+TGG | 0.454210 | 8.1:+72093291 | MS.gene066427:CDS |
| GTGTTGCTTTATCCAGCTCA+TGG | 0.454264 | 8.1:-72093176 | None:intergenic |
| ACTGATCTCGAAAGATTGAT+AGG | 0.457284 | 8.1:-72093288 | None:intergenic |
| CCATCAGAGAAGAATTTAAG+AGG | 0.458052 | 8.1:+72092703 | MS.gene066427:CDS |
| GATTACTTGAACAGAGAACT+TGG | 0.460253 | 8.1:+72093426 | MS.gene066427:CDS |
| CGTCGCAACCTACGAAGCTC+TGG | 0.462348 | 8.1:-72093318 | None:intergenic |
| TGCAAATTCTCTCCATGAGC+TGG | 0.472289 | 8.1:+72093164 | MS.gene066427:CDS |
| GAAGTTTGAGTCGCAATAGT+TGG | 0.474380 | 8.1:-72093129 | None:intergenic |
| GAGACCTCCTCCTTCTGATT+CGG | 0.480952 | 8.1:+72093380 | MS.gene066427:CDS |
| TTCGTAGTTTCAAATGGCAC+TGG | 0.481368 | 8.1:+72092528 | None:intergenic |
| TTCTTAGGTCAGAAGTTGAC+AGG | 0.485003 | 8.1:+72092728 | MS.gene066427:CDS |
| CCTCTTAAATTCTTCTCTGA+TGG | 0.488428 | 8.1:-72092703 | None:intergenic |
| AAGCTTGTTTCCATCTTGAT+CGG | 0.496584 | 8.1:+72092659 | MS.gene066427:CDS |
| CAATATTTGAAGATTTGGTA+AGG | 0.503933 | 8.1:+72092941 | MS.gene066427:CDS |
| CCTATAGAAATGCCATTAGC+TGG | 0.505528 | 8.1:-72093252 | None:intergenic |
| TCAATCTTTCGAGATCAGTT+GGG | 0.511829 | 8.1:+72093292 | MS.gene066427:CDS |
| AACTTTGATTCCGATCAAGA+TGG | 0.519631 | 8.1:-72092669 | None:intergenic |
| TTTGTTTGAGTTGAAATCAT+CGG | 0.521912 | 8.1:+72093005 | MS.gene066427:CDS |
| CCAAACACCATAGCTCATAT+CGG | 0.531120 | 8.1:-72092807 | None:intergenic |
| TTGGGTTGCCAGAGCTTCGT+AGG | 0.533470 | 8.1:+72093310 | MS.gene066427:CDS |
| AATCAAGAGCGAAGGGAGAA+AGG | 0.534973 | 8.1:+72092898 | MS.gene066427:CDS |
| ACCAGAGAGAAGAAATAGAT+GGG | 0.553983 | 8.1:+72092975 | MS.gene066427:CDS |
| TGTTGTTTACTGTGATGTTG+AGG | 0.554593 | 8.1:+72092855 | MS.gene066427:CDS |
| TTGCAGTATCTTCACATCGC+GGG | 0.554850 | 8.1:-72093106 | None:intergenic |
| GGTGTTTGGCTCGTGCTGCA+GGG | 0.562065 | 8.1:+72092821 | MS.gene066427:CDS |
| GATGATTTCAACTCAAACAA+AGG | 0.581112 | 8.1:-72093003 | None:intergenic |
| TATTTGAAGATTTGGTAAGG+AGG | 0.589953 | 8.1:+72092944 | MS.gene066427:CDS |
| AGGGTTACCGATATGAGCTA+TGG | 0.591762 | 8.1:+72092800 | MS.gene066427:CDS |
| CAGGGCAAACAAGTTTGAGT+GGG | 0.594880 | 8.1:+72093358 | MS.gene066427:CDS |
| GAAAATGGAATCAAGAGCGA+AGG | 0.596859 | 8.1:+72092890 | MS.gene066427:CDS |
| ACAGGGCAAACAAGTTTGAG+TGG | 0.597798 | 8.1:+72093357 | MS.gene066427:CDS |
| TTAGCACTATCCGAATCAGA+AGG | 0.613709 | 8.1:-72093390 | None:intergenic |
| AAAATGGAATCAAGAGCGAA+GGG | 0.624157 | 8.1:+72092891 | MS.gene066427:CDS |
| GACAGCATCATCTACAACGG+AGG | 0.629029 | 8.1:-72093052 | None:intergenic |
| ATGGCACTGGTTGTAATATG+TGG | 0.645253 | 8.1:+72092541 | MS.gene066427:CDS |
| CTATCCGAATCAGAAGGAGG+AGG | 0.657212 | 8.1:-72093384 | None:intergenic |
| GATCTCGAAAGATTGATAGG+AGG | 0.664316 | 8.1:-72093285 | None:intergenic |
| GCACTATCCGAATCAGAAGG+AGG | 0.671033 | 8.1:-72093387 | None:intergenic |
| GCTGGATAAAGCAACACAAG+AGG | 0.673279 | 8.1:+72093182 | MS.gene066427:CDS |
| ATATGTGGTCAACCATGCAG+TGG | 0.681649 | 8.1:+72092556 | MS.gene066427:CDS |
| GTTGCAGTATCTTCACATCG+CGG | 0.688808 | 8.1:-72093107 | None:intergenic |
| AGAGACAGCATCATCTACAA+CGG | 0.703655 | 8.1:-72093055 | None:intergenic |
| GCACATTCATGAAATTGACA+GGG | 0.710510 | 8.1:+72093340 | MS.gene066427:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTCTTTGAATAACATTAA+GGG | + | chr8.1:72092781-72092800 | MS.gene066427:CDS | 20.0% |
| !! | TGATTCTTTGAATAACATTA+AGG | + | chr8.1:72092780-72092799 | MS.gene066427:CDS | 20.0% |
| !! | CAATATTTGAAGATTTGGTA+AGG | + | chr8.1:72092941-72092960 | MS.gene066427:CDS | 25.0% |
| !!! | TTTGTTTGAGTTGAAATCAT+CGG | + | chr8.1:72093005-72093024 | MS.gene066427:CDS | 25.0% |
| AGAATTTAAGAGGAGTTCTT+AGG | + | chr8.1:72092713-72092732 | MS.gene066427:CDS | 30.0% | |
| CGATGCAATATTTGAAGATT+TGG | + | chr8.1:72092936-72092955 | MS.gene066427:CDS | 30.0% | |
| CTCTTACATAACCAAAAAAG+TGG | + | chr8.1:72093074-72093093 | MS.gene066427:CDS | 30.0% | |
| GATGATTTCAACTCAAACAA+AGG | - | chr8.1:72093006-72093025 | None:intergenic | 30.0% | |
| ! | TATTTGAAGATTTGGTAAGG+AGG | + | chr8.1:72092944-72092963 | MS.gene066427:CDS | 30.0% |
| AAAATGGAATCAAGAGCGAA+GGG | + | chr8.1:72092891-72092910 | MS.gene066427:CDS | 35.0% | |
| AACCAGAGAGAAGAAATAGA+TGG | + | chr8.1:72092974-72092993 | MS.gene066427:CDS | 35.0% | |
| AACTTTGATTCCGATCAAGA+TGG | - | chr8.1:72092672-72092691 | None:intergenic | 35.0% | |
| ACCAGAGAGAAGAAATAGAT+GGG | + | chr8.1:72092975-72092994 | MS.gene066427:CDS | 35.0% | |
| ACTGATCTCGAAAGATTGAT+AGG | - | chr8.1:72093291-72093310 | None:intergenic | 35.0% | |
| ATCAATCTTTCGAGATCAGT+TGG | + | chr8.1:72093291-72093310 | MS.gene066427:CDS | 35.0% | |
| CAGCTAATGGCATTTCTATA+GGG | + | chr8.1:72093253-72093272 | MS.gene066427:CDS | 35.0% | |
| CCATCAGAGAAGAATTTAAG+AGG | + | chr8.1:72092703-72092722 | MS.gene066427:CDS | 35.0% | |
| CCTCTTAAATTCTTCTCTGA+TGG | - | chr8.1:72092706-72092725 | None:intergenic | 35.0% | |
| GATTACTTGAACAGAGAACT+TGG | + | chr8.1:72093426-72093445 | MS.gene066427:CDS | 35.0% | |
| GCACATTCATGAAATTGACA+GGG | + | chr8.1:72093340-72093359 | MS.gene066427:CDS | 35.0% | |
| TCAATCTTTCGAGATCAGTT+GGG | + | chr8.1:72093292-72093311 | MS.gene066427:CDS | 35.0% | |
| ! | AAGCTTGTTTCCATCTTGAT+CGG | + | chr8.1:72092659-72092678 | MS.gene066427:CDS | 35.0% |
| ! | AGGATGATGGTTGTAGAAAA+TGG | + | chr8.1:72092875-72092894 | MS.gene066427:CDS | 35.0% |
| ! | GACTCAAACTTCACGTTTTT+CGG | + | chr8.1:72093140-72093159 | MS.gene066427:CDS | 35.0% |
| ! | TGTTGTTTACTGTGATGTTG+AGG | + | chr8.1:72092855-72092874 | MS.gene066427:CDS | 35.0% |
| !!! | GGTTTTTGAGTCCACTTTTT+TGG | - | chr8.1:72093088-72093107 | None:intergenic | 35.0% |
| AGAGACAGCATCATCTACAA+CGG | - | chr8.1:72093058-72093077 | None:intergenic | 40.0% | |
| CCAAACACCATAGCTCATAT+CGG | - | chr8.1:72092810-72092829 | None:intergenic | 40.0% | |
| CCAGCTAATGGCATTTCTAT+AGG | + | chr8.1:72093252-72093271 | MS.gene066427:CDS | 40.0% | |
| CCTATAGAAATGCCATTAGC+TGG | - | chr8.1:72093255-72093274 | None:intergenic | 40.0% | |
| CGCACATTCATGAAATTGAC+AGG | + | chr8.1:72093339-72093358 | MS.gene066427:CDS | 40.0% | |
| GAAAATGGAATCAAGAGCGA+AGG | + | chr8.1:72092890-72092909 | MS.gene066427:CDS | 40.0% | |
| GAAGTTTGAGTCGCAATAGT+TGG | - | chr8.1:72093132-72093151 | None:intergenic | 40.0% | |
| GATCTCGAAAGATTGATAGG+AGG | - | chr8.1:72093288-72093307 | None:intergenic | 40.0% | |
| TACTGTGATGTTGAGGATGA+TGG | + | chr8.1:72092862-72092881 | MS.gene066427:CDS | 40.0% | |
| TTAGCACTATCCGAATCAGA+AGG | - | chr8.1:72093393-72093412 | None:intergenic | 40.0% | |
| TTCTTAGGTCAGAAGTTGAC+AGG | + | chr8.1:72092728-72092747 | MS.gene066427:CDS | 40.0% | |
| ! | TCCCATCTATTTCTTCTCTC+TGG | - | chr8.1:72092979-72092998 | None:intergenic | 40.0% |
| ! | TGACGATTCTTTGAGAGCTT+CGG | - | chr8.1:72092608-72092627 | None:intergenic | 40.0% |
| !! | ATGGCACTGGTTGTAATATG+TGG | + | chr8.1:72092541-72092560 | MS.gene066427:CDS | 40.0% |
| AATCAAGAGCGAAGGGAGAA+AGG | + | chr8.1:72092898-72092917 | MS.gene066427:CDS | 45.0% | |
| ACAGGGCAAACAAGTTTGAG+TGG | + | chr8.1:72093357-72093376 | MS.gene066427:CDS | 45.0% | |
| AGGGTTACCGATATGAGCTA+TGG | + | chr8.1:72092800-72092819 | MS.gene066427:CDS | 45.0% | |
| ATATGTGGTCAACCATGCAG+TGG | + | chr8.1:72092556-72092575 | MS.gene066427:CDS | 45.0% | |
| CAGGGCAAACAAGTTTGAGT+GGG | + | chr8.1:72093358-72093377 | MS.gene066427:CDS | 45.0% | |
| CCGATATGAGCTATGGTGTT+TGG | + | chr8.1:72092807-72092826 | MS.gene066427:CDS | 45.0% | |
| CTTGGTATGCTACCAGCTAA+TGG | + | chr8.1:72093240-72093259 | MS.gene066427:CDS | 45.0% | |
| GCTGGATAAAGCAACACAAG+AGG | + | chr8.1:72093182-72093201 | MS.gene066427:CDS | 45.0% | |
| GTTGCAGTATCTTCACATCG+CGG | - | chr8.1:72093110-72093129 | None:intergenic | 45.0% | |
| TGCAAATTCTCTCCATGAGC+TGG | + | chr8.1:72093164-72093183 | MS.gene066427:CDS | 45.0% | |
| TTGCAGTATCTTCACATCGC+GGG | - | chr8.1:72093109-72093128 | None:intergenic | 45.0% | |
| !! | GCTTTGGATTTTCCACTGCA+TGG | - | chr8.1:72092571-72092590 | None:intergenic | 45.0% |
| !! | GTGTTGCTTTATCCAGCTCA+TGG | - | chr8.1:72093179-72093198 | None:intergenic | 45.0% |
| CTATCCGAATCAGAAGGAGG+AGG | - | chr8.1:72093387-72093406 | None:intergenic | 50.0% | |
| GAAGCGCAATCTCGTGATCT+TGG | + | chr8.1:72093222-72093241 | MS.gene066427:CDS | 50.0% | |
| GACAGCATCATCTACAACGG+AGG | - | chr8.1:72093055-72093074 | None:intergenic | 50.0% | |
| GAGACCTCCTCCTTCTGATT+CGG | + | chr8.1:72093380-72093399 | MS.gene066427:CDS | 50.0% | |
| GCACTATCCGAATCAGAAGG+AGG | - | chr8.1:72093390-72093409 | None:intergenic | 50.0% | |
| GGCTAGACTTAGCGCAGCTT+TGG | - | chr8.1:72092587-72092606 | None:intergenic | 55.0% | |
| ! | TTGGGTTGCCAGAGCTTCGT+AGG | + | chr8.1:72093310-72093329 | MS.gene066427:CDS | 55.0% |
| CGTCGCAACCTACGAAGCTC+TGG | - | chr8.1:72093321-72093340 | None:intergenic | 60.0% | |
| ! | GGTGTTTGGCTCGTGCTGCA+GGG | + | chr8.1:72092821-72092840 | MS.gene066427:CDS | 60.0% |
| ! | TGGTGTTTGGCTCGTGCTGC+AGG | + | chr8.1:72092820-72092839 | MS.gene066427:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 72092541 | 72093458 | 72092541 | ID=MS.gene066427 |
| chr8.1 | mRNA | 72092541 | 72093458 | 72092541 | ID=MS.gene066427.t1;Parent=MS.gene066427 |
| chr8.1 | exon | 72092541 | 72093458 | 72092541 | ID=MS.gene066427.t1.exon1;Parent=MS.gene066427.t1 |
| chr8.1 | CDS | 72092541 | 72093458 | 72092541 | ID=cds.MS.gene066427.t1;Parent=MS.gene066427.t1 |
| Gene Sequence |
| Protein sequence |
