AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072561


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072561.t1 MTR_7g111980 90.223 583 44 6 1 579 1 574 0.0 1040
MS.gene072561.t1 MTR_7g111980 93.279 491 32 1 90 579 1 491 0.0 921
MS.gene072561.t1 MTR_7g111960 59.797 592 192 14 1 577 1 561 0.0 622
MS.gene072561.t1 MTR_7g112000 47.104 518 232 13 62 571 41 524 3.81e-131 394
MS.gene072561.t1 MTR_2g450080 29.091 550 332 15 64 571 53 586 3.38e-52 188
MS.gene072561.t1 MTR_8g104490 33.333 417 236 13 65 450 50 455 1.03e-51 185
MS.gene072561.t1 MTR_6g083730 34.604 341 202 8 61 387 48 381 7.40e-51 182
MS.gene072561.t1 MTR_4g090970 35.224 335 198 8 64 385 54 382 3.25e-50 183
MS.gene072561.t1 MTR_4g106810 28.782 542 322 19 65 577 40 546 1.67e-48 177
MS.gene072561.t1 MTR_8g104510 35.484 341 191 10 65 387 50 379 1.74e-48 176
MS.gene072561.t1 MTR_8g104490 33.763 388 227 12 82 450 14 390 2.16e-48 174
MS.gene072561.t1 MTR_2g011810 33.832 334 204 7 64 385 55 383 3.31e-48 178
MS.gene072561.t1 MTR_4g128600 33.433 335 204 8 64 385 52 380 7.86e-48 177
MS.gene072561.t1 MTR_6g083320 38.340 253 142 5 61 300 48 299 2.05e-42 157
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072561.t1 AT5G26920 39.233 339 183 8 57 386 37 361 2.59e-65 219
MS.gene072561.t1 AT5G26920 34.222 450 244 14 61 493 41 455 1.27e-64 221
MS.gene072561.t1 AT5G26920 33.630 449 240 14 61 493 41 447 1.45e-61 213
MS.gene072561.t1 AT5G57580 36.391 338 194 8 64 386 50 381 2.60e-56 201
MS.gene072561.t1 AT4G25800 36.202 337 196 8 64 386 39 370 4.09e-55 196
MS.gene072561.t1 AT4G25800 36.202 337 196 8 64 386 39 370 4.09e-55 196
MS.gene072561.t1 AT2G24300 35.821 335 197 8 65 386 51 380 3.43e-51 186
MS.gene072561.t1 AT2G24300 35.821 335 197 8 65 386 47 376 3.53e-51 186
MS.gene072561.t1 AT4G31000 29.944 531 324 18 64 571 50 555 6.12e-49 179
MS.gene072561.t1 AT2G24300 37.288 295 175 7 97 386 40 329 2.88e-48 177
MS.gene072561.t1 AT2G18750 33.832 334 202 9 64 385 56 382 3.40e-47 175
MS.gene072561.t1 AT2G18750 33.832 334 202 9 64 385 56 382 3.40e-47 175
MS.gene072561.t1 AT2G18750 33.832 334 202 9 64 385 56 382 3.40e-47 175
MS.gene072561.t1 AT5G62570 35.135 333 195 11 37 355 17 342 8.11e-47 169
MS.gene072561.t1 AT5G62570 36.012 336 194 11 64 387 31 357 8.18e-47 171
MS.gene072561.t1 AT5G62570 33.973 365 218 12 37 387 17 372 8.32e-47 172
MS.gene072561.t1 AT1G73805 34.921 315 185 9 64 368 49 353 9.62e-44 162
MS.gene072561.t1 AT5G62570 37.319 276 156 8 37 300 17 287 7.09e-41 150
MS.gene072561.t1 AT4G31000 28.776 490 293 17 97 571 86 534 2.44e-37 145

Find 117 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGAAAATTACAACTTATA+TGG 0.249341 7.3:+4455578 MS.gene072561:CDS
TGTCTTTAATGCAATTTATA+AGG 0.254202 7.3:+4454215 MS.gene072561:CDS
AAACAAGTTTGCATTCTTCT+TGG 0.267253 7.3:-4455747 None:intergenic
TCAAATGGGTCATATCAATA+AGG 0.269623 7.3:+4455711 MS.gene072561:CDS
CGAACATCCAGGACCTTAAA+AGG 0.293535 7.3:-4453655 None:intergenic
GCTTTGGGAAAATAGAAAAT+AGG 0.294223 7.3:+4454078 MS.gene072561:intron
CTCTCTTAATGAAGCTTCAT+TGG 0.301175 7.3:-4453940 None:intergenic
CTAGAAAGTCAGACTGTTGC+AGG 0.314296 7.3:-4454614 None:intergenic
AAAACACATACGGAAATAAA+AGG 0.316297 7.3:-4451467 None:intergenic
AAGAGACATACCTTGGGTTT+AGG 0.317099 7.3:-4451798 None:intergenic
CACCATATAGGACACATAAT+TGG 0.319161 7.3:-4453390 None:intergenic
CCAAGTGTTGTTGTATCAAT+TGG 0.338990 7.3:-4454534 None:intergenic
ATCCAATTATGTGTCCTATA+TGG 0.346907 7.3:+4453388 MS.gene072561:CDS
ACCTCCCTCAGCTTTGATCC+TGG 0.359913 7.3:-4453290 None:intergenic
CGTGGTATTTCTCTTATGTC+TGG 0.364419 7.3:-4455428 None:intergenic
ATTCAATTGGAGTGTGCATT+CGG 0.364879 7.3:+4453617 MS.gene072561:CDS
TAATATCCTCAATTCCTCTA+TGG 0.371453 7.3:+4455634 MS.gene072561:CDS
TTAAAGACAAGGAACGATAT+TGG 0.379176 7.3:-4454201 None:intergenic
ACGCTTATGTCCAACACATT+TGG 0.388946 7.3:+4453208 MS.gene072561:CDS
ATAGTTCAATCAAATTCAAT+TGG 0.395077 7.3:+4453604 MS.gene072561:CDS
GCAAGATTGCAAGGAATTCA+TGG 0.398753 7.3:+4454100 MS.gene072561:CDS
GACTTTGTGAAAATTCTGTT+TGG 0.402548 7.3:-4453268 None:intergenic
AGGTTGGGATTGCTATCAAA+TGG 0.410010 7.3:+4455696 MS.gene072561:CDS
TACATTGATGGGGATGGTTA+TGG 0.410884 7.3:+4455476 MS.gene072561:CDS
GGAACCCTTACTTCGAAAAC+TGG 0.411784 7.3:+4451601 MS.gene072561:CDS
TTCAATTGGAGTGTGCATTC+GGG 0.412066 7.3:+4453618 MS.gene072561:CDS
GACACATAATTGGATCTTCA+TGG 0.423184 7.3:-4453380 None:intergenic
CAAATGGGTCATATCAATAA+GGG 0.429109 7.3:+4455712 MS.gene072561:CDS
CCAATTGATACAACAACACT+TGG 0.429867 7.3:+4454534 MS.gene072561:CDS
ACAACAACACTTGGATTGGC+GGG 0.430460 7.3:+4454543 MS.gene072561:CDS
AGGGAAGAAACGGTCAATTT+CGG 0.433035 7.3:+4453569 MS.gene072561:CDS
CGCTTAGTACTGCTGGTTGA+AGG 0.436286 7.3:-4451393 None:intergenic
GTCCTGGATGTTCGAGGAAA+GGG 0.442948 7.3:+4453664 MS.gene072561:CDS
ATTTCTCTTATGTCTGGCAC+TGG 0.445144 7.3:-4455422 None:intergenic
TCATGGAATACAAACTGTTA+AGG 0.451447 7.3:+4453896 MS.gene072561:CDS
GAATAGCCACCTTCTACAAC+TGG 0.452656 7.3:-4455509 None:intergenic
CTCTACTTCATATGTTAATG+AGG 0.454792 7.3:+4455370 MS.gene072561:CDS
GAATTCATTACACTAAGAAA+TGG 0.459824 7.3:+4453502 MS.gene072561:CDS
ATCTCTAAACCAGCAAGAAA+AGG 0.460286 7.3:+4454284 MS.gene072561:CDS
GGAGCTGAAATGTACATTGA+TGG 0.463707 7.3:+4455464 MS.gene072561:CDS
GAACCGAGAAGAACAACAAA+AGG 0.470127 7.3:+4451434 MS.gene072561:CDS
TGATACAACAACACTTGGAT+TGG 0.474933 7.3:+4454539 MS.gene072561:CDS
TAATGCAATTTATAAGGTTG+TGG 0.483276 7.3:+4454221 MS.gene072561:CDS
AAGTAAGGGTTCCAAGCAAA+AGG 0.485530 7.3:-4451591 None:intergenic
GACAAGCAGTTGGCCTCTCA+TGG 0.486364 7.3:+4453879 MS.gene072561:CDS
GCTCCGACGTGATTGTTTCG+TGG 0.498008 7.3:-4455446 None:intergenic
AAAGCAGTGTGGTGTAAGGT+TGG 0.498718 7.3:+4455680 MS.gene072561:CDS
AAGCGAATAAAACAACATCA+TGG 0.498950 7.3:+4451411 MS.gene072561:CDS
ATGAGGTATGGCGTCTGAAA+GGG 0.499358 7.3:+4453835 MS.gene072561:CDS
TACAACAACACTTGGATTGG+CGG 0.500047 7.3:+4454542 MS.gene072561:CDS
GAGCTGAAATGTACATTGAT+GGG 0.500184 7.3:+4455465 MS.gene072561:CDS
ATCAAAAGCAGTGTGGTGTA+AGG 0.502186 7.3:+4455676 MS.gene072561:CDS
GAAACGGTCAATTTCGGCTA+GGG 0.507035 7.3:+4453575 MS.gene072561:CDS
TTTAAGGTCCTGGATGTTCG+AGG 0.509003 7.3:+4453658 MS.gene072561:CDS
TTCATATGTTAATGAGGGAA+TGG 0.510467 7.3:+4455376 MS.gene072561:CDS
GATATATCAAAGGGAAGAAA+CGG 0.511181 7.3:+4453559 MS.gene072561:CDS
GCACTGGATCAACATAGATC+TGG 0.511948 7.3:-4455406 None:intergenic
CTTACAAACATTTCAATGAT+CGG 0.513255 7.3:+4454502 MS.gene072561:CDS
TCAAATTGCACCTCCAAGAG+AGG 0.517774 7.3:+4453453 MS.gene072561:CDS
AAGCAGTGTGGTGTAAGGTT+GGG 0.517845 7.3:+4455681 MS.gene072561:CDS
AGAAAATAGGCAAGATTGCA+AGG 0.529169 7.3:+4454091 MS.gene072561:intron
GGAAAAGAAGAACTGTTGAA+AGG 0.529919 7.3:+4453475 MS.gene072561:CDS
GATGAGGTATGGCGTCTGAA+AGG 0.532114 7.3:+4453834 MS.gene072561:CDS
GACTTTCTAGTTTGTCAGCA+AGG 0.534248 7.3:+4454627 MS.gene072561:CDS
TACCCTTTCCTCGAACATCC+AGG 0.537589 7.3:-4453666 None:intergenic
ATATATCCATAGAGGAATTG+AGG 0.540392 7.3:-4455640 None:intergenic
AACAGTTTGTATTCCATGAG+AGG 0.541937 7.3:-4453892 None:intergenic
GAGTTTACAGATATATCAAA+GGG 0.542863 7.3:+4453550 MS.gene072561:CDS
GGTTGGGATTGCTATCAAAT+GGG 0.547074 7.3:+4455697 MS.gene072561:CDS
AAATCAGCAACGCGTAGTCA+TGG 0.550182 7.3:+4453345 MS.gene072561:CDS
CATACGGAAATAAAAGGTGT+TGG 0.554012 7.3:-4451461 None:intergenic
TGAGTTTACAGATATATCAA+AGG 0.556394 7.3:+4453549 MS.gene072561:CDS
TGCAATTTATAAGGTTGTGG+AGG 0.556418 7.3:+4454224 MS.gene072561:CDS
TCTACTTCATATGTTAATGA+GGG 0.557125 7.3:+4455371 MS.gene072561:CDS
GGCTCGCATGTTGCATACAT+AGG 0.557498 7.3:-4455557 None:intergenic
CATCGTTGAATGATGAGGTA+TGG 0.559097 7.3:+4453823 MS.gene072561:CDS
CATACCTTGGGTTTAGGTGG+CGG 0.565063 7.3:-4451792 None:intergenic
GTTGTTGTATCAATTGGCAA+TGG 0.566856 7.3:-4454528 None:intergenic
TCACGCAGTTCAATTTGAAG+TGG 0.568198 7.3:-4453316 None:intergenic
AGACATACCTTGGGTTTAGG+TGG 0.570711 7.3:-4451795 None:intergenic
AGGAATTGAGGATATTAACA+TGG 0.571805 7.3:-4455628 None:intergenic
AGCGAATAAAACAACATCAT+GGG 0.573517 7.3:+4451412 MS.gene072561:CDS
GGTCCTGGATGTTCGAGGAA+AGG 0.575080 7.3:+4453663 MS.gene072561:CDS
CAAATTGCACCTCCAAGAGA+GGG 0.582196 7.3:+4453454 MS.gene072561:CDS
ACTGCTTGATATATCCATAG+AGG 0.587495 7.3:-4455648 None:intergenic
CAACGCGTAGTCATGGAAGA+AGG 0.592392 7.3:+4453352 MS.gene072561:CDS
GTGTCATTGACAGCGCTTGG+TGG 0.595299 7.3:+4454461 MS.gene072561:intron
ACGTCTCCTTCCAAATGTGT+TGG 0.598433 7.3:-4453218 None:intergenic
TGTAGAAGGTGGCTATTCGA+TGG 0.598654 7.3:+4455514 MS.gene072561:CDS
AAACGGTCAATTTCGGCTAG+GGG 0.604248 7.3:+4453576 MS.gene072561:CDS
CAATGAAGCTTCATTAAGAG+AGG 0.604707 7.3:+4453941 MS.gene072561:CDS
GTTCCTCAACCAGATACAAG+AGG 0.606042 7.3:+4451762 MS.gene072561:intron
AGAAACGGTCAATTTCGGCT+AGG 0.609606 7.3:+4453574 MS.gene072561:CDS
ATTGGAGTGTGCATTCGGGA+AGG 0.610490 7.3:+4453622 MS.gene072561:CDS
CAACAACACTTGGATTGGCG+GGG 0.619083 7.3:+4454544 MS.gene072561:CDS
AAGTCCAGGATCAAAGCTGA+GGG 0.620476 7.3:+4453286 MS.gene072561:CDS
TTATGTCCAACACATTTGGA+AGG 0.624378 7.3:+4453212 MS.gene072561:CDS
TATAAATTGCATTAAAGACA+AGG 0.627430 7.3:-4454212 None:intergenic
AAAGTCCAGGATCAAAGCTG+AGG 0.634583 7.3:+4453285 MS.gene072561:CDS
CAAGCAAAAGGCGAATGCAG+TGG 0.634985 7.3:-4451579 None:intergenic
TGGTAAACTTGACAAGCAGT+TGG 0.637384 7.3:+4453869 MS.gene072561:CDS
TAGTCGTAGTTGTGATGACA+AGG 0.637677 7.3:+4451359 MS.gene072561:CDS
TAGAAAGTCAGACTGTTGCA+GGG 0.643701 7.3:-4454613 None:intergenic
ACATATGAAGTAGAGATACA+TGG 0.644934 7.3:-4455362 None:intergenic
AAAAGAGGATTGGACAGCTG+AGG 0.645437 7.3:+4453420 MS.gene072561:CDS
TCGTCCATCGTTGAATGATG+AGG 0.648172 7.3:+4453818 MS.gene072561:CDS
GTACAAAATGCACAATATGA+CGG 0.648816 7.3:+4454579 MS.gene072561:CDS
TTCACCGCCACCTAAACCCA+AGG 0.650298 7.3:+4451788 MS.gene072561:CDS
TCCAGGATCAAAGCTGAGGG+AGG 0.652637 7.3:+4453289 MS.gene072561:CDS
GGAATTGAGGATATTAACAT+GGG 0.655798 7.3:-4455627 None:intergenic
ATTATTAGATGGCATCGAAG+AGG 0.671982 7.3:+4451316 None:intergenic
AGCTGAAATGTACATTGATG+GGG 0.679345 7.3:+4455466 MS.gene072561:CDS
GTGATAAATCAAAAGCAGTG+TGG 0.718101 7.3:+4455669 MS.gene072561:CDS
GAAATGTACATTGATGGGGA+TGG 0.735643 7.3:+4455470 MS.gene072561:CDS
ACATAATTGGATCTTCATGG+AGG 0.751325 7.3:-4453377 None:intergenic
CATACCTCATCATTCAACGA+TGG 0.753671 7.3:-4453822 None:intergenic
ATACCACGAAACAATCACGT+CGG 0.787963 7.3:+4455443 MS.gene072561:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATAAAACACATA+CGG - chr7.3:4451480-4451499 None:intergenic 10.0%
!! ATACTATTACTAATTAATAA+TGG + chr7.3:4451699-4451718 MS.gene072561:intron 10.0%
!! GATTAAAAAATTATGTAATT+AGG - chr7.3:4452417-4452436 None:intergenic 10.0%
!!! AATTTTCTTATTATAAATGT+TGG - chr7.3:4451921-4451940 None:intergenic 10.0%
!!! ATGTAATAATATTGATTTAT+TGG - chr7.3:4455136-4455155 None:intergenic 10.0%
!!! ATTTTCTTATTATAAATGTT+GGG - chr7.3:4451920-4451939 None:intergenic 10.0%
!! CGAATTATAATTTAATATGA+AGG + chr7.3:4452879-4452898 MS.gene072561:intron 15.0%
!! TAAATTTAAGAATCCATATA+AGG - chr7.3:4454374-4454393 None:intergenic 15.0%
!! TAGTAATTAGCTATTAAAAT+AGG + chr7.3:4453712-4453731 MS.gene072561:intron 15.0%
!!! AACTAAATAAAGAAGTATTA+GGG - chr7.3:4454018-4454037 None:intergenic 15.0%
!!! AATGAATTTGATTTTGAAAA+TGG + chr7.3:4452487-4452506 MS.gene072561:intron 15.0%
!!! ATATTTTGAAATATTATGTG+TGG + chr7.3:4453971-4453990 MS.gene072561:intron 15.0%
!!! ATGGATTATAATAATTTAAG+AGG + chr7.3:4452817-4452836 MS.gene072561:intron 15.0%
!!! TAATGTTGTATATGATTTTT+TGG + chr7.3:4454056-4454075 MS.gene072561:intron 15.0%
!!! TAGCAATTTTCTTATAATAA+TGG + chr7.3:4452798-4452817 MS.gene072561:intron 15.0%
!!! TATTGATATTTGTTTTTGTT+TGG + chr7.3:4453168-4453187 MS.gene072561:intron 15.0%
!! ATAGTTCAATCAAATTCAAT+TGG + chr7.3:4453604-4453623 MS.gene072561:CDS 20.0%
!! CTTCATGTATTTAAATATGA+GGG - chr7.3:4455039-4455058 None:intergenic 20.0%
!! GAAATTGAGTTTATATCTTT+CGG - chr7.3:4453108-4453127 None:intergenic 20.0%
!! GAATTTGGATTTACAAATTT+GGG - chr7.3:4452368-4452387 None:intergenic 20.0%
!! TAGTAATAGTATATACTACA+TGG - chr7.3:4451691-4451710 None:intergenic 20.0%
!! TATAAATTGCATTAAAGACA+AGG - chr7.3:4454215-4454234 None:intergenic 20.0%
!! TCTTCATGTATTTAAATATG+AGG - chr7.3:4455040-4455059 None:intergenic 20.0%
!! TGAATTTGGATTTACAAATT+TGG - chr7.3:4452369-4452388 None:intergenic 20.0%
!! TGTCTTTAATGCAATTTATA+AGG + chr7.3:4454215-4454234 MS.gene072561:CDS 20.0%
!!! ATATTGATTTATTGGTTTTC+TGG - chr7.3:4455128-4455147 None:intergenic 20.0%
!!! ATCTGAATTTGATTTTGAAA+TGG + chr7.3:4452434-4452453 MS.gene072561:intron 20.0%
!!! CAACTAAATAAAGAAGTATT+AGG - chr7.3:4454019-4454038 None:intergenic 20.0%
!!! TACTATACACAACTATATTT+TGG - chr7.3:4454412-4454431 None:intergenic 20.0%
! AAAACACATACGGAAATAAA+AGG - chr7.3:4451470-4451489 None:intergenic 25.0%
! AATTCAAACCTCTTAATGAA+TGG - chr7.3:4451852-4451871 None:intergenic 25.0%
! ACAATATCAACAATATTCCT+CGG - chr7.3:4452072-4452091 None:intergenic 25.0%
! ACAATATTGTTTCATCATGT+TGG + chr7.3:4452130-4452149 MS.gene072561:intron 25.0%
! AGAAAGAAAGGAACATTTAA+AGG - chr7.3:4451509-4451528 None:intergenic 25.0%
! AGACAAATATTGTGAAATGT+AGG + chr7.3:4454903-4454922 MS.gene072561:intron 25.0%
! AGCTAATTACTAACATTTGT+CGG - chr7.3:4453704-4453723 None:intergenic 25.0%
! AGTCAAATAGTAAGAAAGAA+AGG - chr7.3:4451521-4451540 None:intergenic 25.0%
! ATAAATCTTGTGTTGAAAAG+TGG + chr7.3:4452934-4452953 MS.gene072561:intron 25.0%
! ATCTACCAACATTATGATAT+AGG - chr7.3:4454323-4454342 None:intergenic 25.0%
! CCAGAAAATTACAACTTATA+TGG + chr7.3:4455578-4455597 MS.gene072561:CDS 25.0%
! CTTACAAACATTTCAATGAT+CGG + chr7.3:4454502-4454521 MS.gene072561:CDS 25.0%
! GAATTCATTACACTAAGAAA+TGG + chr7.3:4453502-4453521 MS.gene072561:CDS 25.0%
! GAGTTTACAGATATATCAAA+GGG + chr7.3:4453550-4453569 MS.gene072561:CDS 25.0%
! TAATGCAATTTATAAGGTTG+TGG + chr7.3:4454221-4454240 MS.gene072561:CDS 25.0%
! TCTACTTCATATGTTAATGA+GGG + chr7.3:4455371-4455390 MS.gene072561:CDS 25.0%
! TGAAAAAATTTCTGATTCCT+CGG + chr7.3:4452650-4452669 MS.gene072561:intron 25.0%
! TGAGTTTACAGATATATCAA+AGG + chr7.3:4453549-4453568 MS.gene072561:CDS 25.0%
!! ACCAAATCTATGTTTTATCT+CGG - chr7.3:4455067-4455086 None:intergenic 25.0%
!! ATATTCTGCATAAAACCTTT+TGG + chr7.3:4454675-4454694 MS.gene072561:intron 25.0%
!! CCATATAAGTTGTAATTTTC+TGG - chr7.3:4455581-4455600 None:intergenic 25.0%
!!! ATTTAATATGAAGGAGTGTT+AGG + chr7.3:4452888-4452907 MS.gene072561:intron 25.0%
!!! CTAGTAAAAGAAGCATTTAA+CGG - chr7.3:4454828-4454847 None:intergenic 25.0%
!!! CTTTACTTTTACTTGAACAA+CGG - chr7.3:4453069-4453088 None:intergenic 25.0%
!!! GTATATGATTTTTTGGCTTT+GGG + chr7.3:4454063-4454082 MS.gene072561:intron 25.0%
!!! TGTATATGATTTTTTGGCTT+TGG + chr7.3:4454062-4454081 MS.gene072561:intron 25.0%
!!! TTTTGTTTGGAATTTAGTTG+TGG + chr7.3:4453181-4453200 MS.gene072561:intron 25.0%
AAACAAGTTTGCATTCTTCT+TGG - chr7.3:4455750-4455769 None:intergenic 30.0%
AAGCGAATAAAACAACATCA+TGG + chr7.3:4451411-4451430 MS.gene072561:CDS 30.0%
ACATATGAAGTAGAGATACA+TGG - chr7.3:4455365-4455384 None:intergenic 30.0%
AGCGAATAAAACAACATCAT+GGG + chr7.3:4451412-4451431 MS.gene072561:CDS 30.0%
AGGAATTGAGGATATTAACA+TGG - chr7.3:4455631-4455650 None:intergenic 30.0%
ATATATCCATAGAGGAATTG+AGG - chr7.3:4455643-4455662 None:intergenic 30.0%
ATATCCTAATTCTATCTGTC+TGG + chr7.3:4454801-4454820 MS.gene072561:intron 30.0%
ATATTGTGAAATGTAGGCTA+AGG + chr7.3:4454909-4454928 MS.gene072561:intron 30.0%
ATCCAATTATGTGTCCTATA+TGG + chr7.3:4453388-4453407 MS.gene072561:CDS 30.0%
CAAATGGGTCATATCAATAA+GGG + chr7.3:4455712-4455731 MS.gene072561:CDS 30.0%
CGTTGTTCAAGTAAAAGTAA+AGG + chr7.3:4453067-4453086 MS.gene072561:intron 30.0%
CTCTACTTCATATGTTAATG+AGG + chr7.3:4455370-4455389 MS.gene072561:CDS 30.0%
CTGAAAACTAGTAATAATCC+TGG + chr7.3:4455003-4455022 MS.gene072561:intron 30.0%
GACTTTGTGAAAATTCTGTT+TGG - chr7.3:4453271-4453290 None:intergenic 30.0%
GAGTTAGTAGTATCAAAGTT+TGG - chr7.3:4451728-4451747 None:intergenic 30.0%
GATATATCAAAGGGAAGAAA+CGG + chr7.3:4453559-4453578 MS.gene072561:CDS 30.0%
GCTACATTTCACTATAACTT+CGG - chr7.3:4454959-4454978 None:intergenic 30.0%
GGAATTGAGGATATTAACAT+GGG - chr7.3:4455630-4455649 None:intergenic 30.0%
GTACAAAATGCACAATATGA+CGG + chr7.3:4454579-4454598 MS.gene072561:CDS 30.0%
GTACAGGTCAAAAAGAAATT+GGG + chr7.3:4455324-4455343 MS.gene072561:intron 30.0%
TAAAGGGGAATATAGTAAGA+GGG - chr7.3:4451649-4451668 None:intergenic 30.0%
TAATATCCTCAATTCCTCTA+TGG + chr7.3:4455634-4455653 MS.gene072561:CDS 30.0%
TAATTACTAACATTTGTCGG+AGG - chr7.3:4453701-4453720 None:intergenic 30.0%
TAGTATATACTACATGGTGA+TGG - chr7.3:4451685-4451704 None:intergenic 30.0%
TCAAATGGGTCATATCAATA+AGG + chr7.3:4455711-4455730 MS.gene072561:CDS 30.0%
TCATGGAATACAAACTGTTA+AGG + chr7.3:4453896-4453915 MS.gene072561:CDS 30.0%
TCCGAGATAAAACATAGATT+TGG + chr7.3:4455063-4455082 MS.gene072561:intron 30.0%
TGCATCCTATATCATAATGT+TGG + chr7.3:4454315-4454334 MS.gene072561:intron 30.0%
TTAAAGACAAGGAACGATAT+TGG - chr7.3:4454204-4454223 None:intergenic 30.0%
TTCACACATTAAAGAAGACT+GGG + chr7.3:4451945-4451964 MS.gene072561:intron 30.0%
TTCATATGTTAATGAGGGAA+TGG + chr7.3:4455376-4455395 MS.gene072561:CDS 30.0%
! AATGGATCTGAAATTGATTG+AGG + chr7.3:4452452-4452471 MS.gene072561:intron 30.0%
! ATATGGTGACTTTGAAAAAG+AGG + chr7.3:4453405-4453424 MS.gene072561:CDS 30.0%
! GAAAAAGTCTCAAGTTGTAT+AGG + chr7.3:4454713-4454732 MS.gene072561:intron 30.0%
!! GCTTTGGGAAAATAGAAAAT+AGG + chr7.3:4454078-4454097 MS.gene072561:intron 30.0%
!! GTTGAAGACAATTGATTTTC+TGG - chr7.3:4452304-4452323 None:intergenic 30.0%
!! GTTTTCAGGACAAATAGAAA+AGG - chr7.3:4454991-4455010 None:intergenic 30.0%
!!! AGTTTTGAAATGCATCCAAA+AGG - chr7.3:4454693-4454712 None:intergenic 30.0%
!!! CAGGATTATTACTAGTTTTC+AGG - chr7.3:4455005-4455024 None:intergenic 30.0%
!!! CTTTTTCAAAGTCACCATAT+AGG - chr7.3:4453405-4453424 None:intergenic 30.0%
!!! GAAGAAATGTTTTGTTTGTG+AGG + chr7.3:4452585-4452604 MS.gene072561:intron 30.0%
AAACCTCTTAATGAATGGAC+TGG - chr7.3:4451847-4451866 None:intergenic 35.0%
AAACTTGACAAACCTTTCTG+TGG + chr7.3:4455176-4455195 MS.gene072561:intron 35.0%
AAATTTGGGTATGCGAATCT+CGG - chr7.3:4452354-4452373 None:intergenic 35.0%
AACAGTTTGTATTCCATGAG+AGG - chr7.3:4453895-4453914 None:intergenic 35.0%
AACATTAAACTCCAACACAC+AGG + chr7.3:4452190-4452209 MS.gene072561:intron 35.0%
ACAGAAAGGTTTGTCAAGTT+TGG - chr7.3:4455177-4455196 None:intergenic 35.0%
ACATAATTGGATCTTCATGG+AGG - chr7.3:4453380-4453399 None:intergenic 35.0%
ACATTAAACTCCAACACACA+GGG + chr7.3:4452191-4452210 MS.gene072561:intron 35.0%
ACTGCTTGATATATCCATAG+AGG - chr7.3:4455651-4455670 None:intergenic 35.0%
AGAAAATAGGCAAGATTGCA+AGG + chr7.3:4454091-4454110 MS.gene072561:intron 35.0%
AGCATTAAAGAGACATACCT+TGG - chr7.3:4451808-4451827 None:intergenic 35.0%
AGCTGAAATGTACATTGATG+GGG + chr7.3:4455466-4455485 MS.gene072561:CDS 35.0%
ATAAATGTTGGGAGTAGACA+AGG - chr7.3:4451909-4451928 None:intergenic 35.0%
ATCTCTAAACCAGCAAGAAA+AGG + chr7.3:4454284-4454303 MS.gene072561:CDS 35.0%
ATTCAATTGGAGTGTGCATT+CGG + chr7.3:4453617-4453636 MS.gene072561:CDS 35.0%
CAATGAAGCTTCATTAAGAG+AGG + chr7.3:4453941-4453960 MS.gene072561:CDS 35.0%
CACCATATAGGACACATAAT+TGG - chr7.3:4453393-4453412 None:intergenic 35.0%
CCAATTGATACAACAACACT+TGG + chr7.3:4454534-4454553 MS.gene072561:CDS 35.0%
CTAAAGGGGAATATAGTAAG+AGG - chr7.3:4451650-4451669 None:intergenic 35.0%
CTCTCTTAATGAAGCTTCAT+TGG - chr7.3:4453943-4453962 None:intergenic 35.0%
CTGAAAGGGATACGTAAAAA+TGG + chr7.3:4453849-4453868 MS.gene072561:CDS 35.0%
GAATATAGTAAGAGGGTGAA+TGG - chr7.3:4451642-4451661 None:intergenic 35.0%
GACACATAATTGGATCTTCA+TGG - chr7.3:4453383-4453402 None:intergenic 35.0%
GAGCTGAAATGTACATTGAT+GGG + chr7.3:4455465-4455484 MS.gene072561:CDS 35.0%
GCATTAAAGAGACATACCTT+GGG - chr7.3:4451807-4451826 None:intergenic 35.0%
GGAAAAGAAGAACTGTTGAA+AGG + chr7.3:4453475-4453494 MS.gene072561:CDS 35.0%
GTGATAAATCAAAAGCAGTG+TGG + chr7.3:4455669-4455688 MS.gene072561:CDS 35.0%
GTTCACACATTAAAGAAGAC+TGG + chr7.3:4451944-4451963 MS.gene072561:intron 35.0%
GTTGTTGTATCAATTGGCAA+TGG - chr7.3:4454531-4454550 None:intergenic 35.0%
TAAATGTTGGGAGTAGACAA+GGG - chr7.3:4451908-4451927 None:intergenic 35.0%
TAATTAGGGTGAACGAATCT+AGG - chr7.3:4452402-4452421 None:intergenic 35.0%
TATTCAGAGTGGACCTTATA+TGG + chr7.3:4454358-4454377 MS.gene072561:intron 35.0%
TCTGAATATTCACAGCCAAA+GGG - chr7.3:4454346-4454365 None:intergenic 35.0%
TGATACAACAACACTTGGAT+TGG + chr7.3:4454539-4454558 MS.gene072561:CDS 35.0%
TGCAAGACAAAATGTTAGTC+TGG - chr7.3:4454856-4454875 None:intergenic 35.0%
TGCAATTTATAAGGTTGTGG+AGG + chr7.3:4454224-4454243 MS.gene072561:CDS 35.0%
TGCTATTGACACATTAGAGA+AGG - chr7.3:4452783-4452802 None:intergenic 35.0%
TGTTTCATCATGTTGGAAAG+TGG + chr7.3:4452137-4452156 MS.gene072561:intron 35.0%
TTATGTCCAACACATTTGGA+AGG + chr7.3:4453212-4453231 MS.gene072561:CDS 35.0%
TTTCCAGTCCATTCATTAAG+AGG + chr7.3:4451841-4451860 MS.gene072561:intron 35.0%
! AAACACAAACCTTTTCTTGC+TGG - chr7.3:4454296-4454315 None:intergenic 35.0%
! ACAGAATTTTCACAAAGTCC+AGG + chr7.3:4453272-4453291 MS.gene072561:CDS 35.0%
! ACTGCGGATTTATGGATTTT+GGG + chr7.3:4452561-4452580 MS.gene072561:intron 35.0%
! ACTTTTACTTGAACAACGGT+TGG - chr7.3:4453065-4453084 None:intergenic 35.0%
! ATAATGTTGGTAGATCCCTT+TGG + chr7.3:4454328-4454347 MS.gene072561:intron 35.0%
! CATACGGAAATAAAAGGTGT+TGG - chr7.3:4451464-4451483 None:intergenic 35.0%
! CCAAGTGTTGTTGTATCAAT+TGG - chr7.3:4454537-4454556 None:intergenic 35.0%
! GATCTGAAATTGATTGAGGT+GGG + chr7.3:4452456-4452475 MS.gene072561:intron 35.0%
! GTGACTTTGAAAAAGAGGAT+TGG + chr7.3:4453410-4453429 MS.gene072561:CDS 35.0%
! TCACATTTTCCAGTTGTAGA+AGG + chr7.3:4455500-4455519 MS.gene072561:CDS 35.0%
! TGATTGCAGATTGCATTTTG+CGG + chr7.3:4452523-4452542 MS.gene072561:intron 35.0%
! TTTTATTCGCTTAGTACTGC+TGG - chr7.3:4451403-4451422 None:intergenic 35.0%
! TTTTTCTGACTGCGGATTTA+TGG + chr7.3:4452553-4452572 MS.gene072561:intron 35.0%
!! GGTGAAATTTTGTTGTGTCA+TGG + chr7.3:4455084-4455103 MS.gene072561:intron 35.0%
!!! TCTCCTTTTGTTGTTCTTCT+CGG - chr7.3:4451440-4451459 None:intergenic 35.0%
AAGAGACATACCTTGGGTTT+AGG - chr7.3:4451801-4451820 None:intergenic 40.0%
AAGTAAGGGTTCCAAGCAAA+AGG - chr7.3:4451594-4451613 None:intergenic 40.0%
ACGCTTATGTCCAACACATT+TGG + chr7.3:4453208-4453227 MS.gene072561:CDS 40.0%
AGGGAAGAAACGGTCAATTT+CGG + chr7.3:4453569-4453588 MS.gene072561:CDS 40.0%
AGGTTGGGATTGCTATCAAA+TGG + chr7.3:4455696-4455715 MS.gene072561:CDS 40.0%
ATACCACGAAACAATCACGT+CGG + chr7.3:4455443-4455462 MS.gene072561:CDS 40.0%
ATCAAAAGCAGTGTGGTGTA+AGG + chr7.3:4455676-4455695 MS.gene072561:CDS 40.0%
ATGGAGCAAGAAAGGTCTAA+AGG - chr7.3:4451666-4451685 None:intergenic 40.0%
ATTGACACATTAGAGAAGGC+TGG - chr7.3:4452779-4452798 None:intergenic 40.0%
ATTTCTCTTATGTCTGGCAC+TGG - chr7.3:4455425-4455444 None:intergenic 40.0%
CATACCTCATCATTCAACGA+TGG - chr7.3:4453825-4453844 None:intergenic 40.0%
CATCGTTGAATGATGAGGTA+TGG + chr7.3:4453823-4453842 MS.gene072561:CDS 40.0%
CGTGGTATTTCTCTTATGTC+TGG - chr7.3:4455431-4455450 None:intergenic 40.0%
CTCTGAATATTCACAGCCAA+AGG - chr7.3:4454347-4454366 None:intergenic 40.0%
CTGCCGAGGAATTAAAAATC+CGG - chr7.3:4452715-4452734 None:intergenic 40.0%
GAAATGTACATTGATGGGGA+TGG + chr7.3:4455470-4455489 MS.gene072561:CDS 40.0%
GAACCGAGAAGAACAACAAA+AGG + chr7.3:4451434-4451453 MS.gene072561:CDS 40.0%
GAATCTCGGTGAACGAATTT+GGG - chr7.3:4452340-4452359 None:intergenic 40.0%
GCAAGATTGCAAGGAATTCA+TGG + chr7.3:4454100-4454119 MS.gene072561:CDS 40.0%
GGAGCTGAAATGTACATTGA+TGG + chr7.3:4455464-4455483 MS.gene072561:CDS 40.0%
GGTTGGGATTGCTATCAAAT+GGG + chr7.3:4455697-4455716 MS.gene072561:CDS 40.0%
TAATGAAGTTCCCTGTGTGT+TGG - chr7.3:4452204-4452223 None:intergenic 40.0%
TACATTGATGGGGATGGTTA+TGG + chr7.3:4455476-4455495 MS.gene072561:CDS 40.0%
TAGAAAGTCAGACTGTTGCA+GGG - chr7.3:4454616-4454635 None:intergenic 40.0%
TAGTCGTAGTTGTGATGACA+AGG + chr7.3:4451359-4451378 MS.gene072561:CDS 40.0%
TCACGCAGTTCAATTTGAAG+TGG - chr7.3:4453319-4453338 None:intergenic 40.0%
TGGAGCAAGAAAGGTCTAAA+GGG - chr7.3:4451665-4451684 None:intergenic 40.0%
TGGTAAACTTGACAAGCAGT+TGG + chr7.3:4453869-4453888 MS.gene072561:CDS 40.0%
TTAACTACCGAGGATTTCCT+CGG + chr7.3:4452676-4452695 MS.gene072561:intron 40.0%
TTAACTACCGAGGATTTCCT+CGG - chr7.3:4452695-4452676 None:intergenic 40.0%
TTACTTGAACAACGGTTGGT+TGG - chr7.3:4453061-4453080 None:intergenic 40.0%
TTCAATTGGAGTGTGCATTC+GGG + chr7.3:4453618-4453637 MS.gene072561:CDS 40.0%
TTGACACATTAGAGAAGGCT+GGG - chr7.3:4452778-4452797 None:intergenic 40.0%
TTGGCTGTGAATATTCAGAG+TGG + chr7.3:4454347-4454366 MS.gene072561:intron 40.0%
! AAAATACGTTTTTGCCCCCT+CGG + chr7.3:4451978-4451997 MS.gene072561:intron 40.0%
! ACCTACCAGTTTTCGAAGTA+AGG - chr7.3:4451609-4451628 None:intergenic 40.0%
! ACTGCCGAGGAATTTAAAAC+CGG + chr7.3:4452007-4452026 MS.gene072561:intron 40.0%
! AGGTAGAAGCGAACCTTTTA+AGG + chr7.3:4453642-4453661 MS.gene072561:CDS 40.0%
! AGTTCTTCTTTTCCCTCTCT+TGG - chr7.3:4453469-4453488 None:intergenic 40.0%
! CATTTTCCAGTTGTAGAAGG+TGG + chr7.3:4455503-4455522 MS.gene072561:CDS 40.0%
! CCTACCAGTTTTCGAAGTAA+GGG - chr7.3:4451608-4451627 None:intergenic 40.0%
! GACTGCGGATTTATGGATTT+TGG + chr7.3:4452560-4452579 MS.gene072561:intron 40.0%
! GGATCTGAAATTGATTGAGG+TGG + chr7.3:4452455-4452474 MS.gene072561:intron 40.0%
! GTGGAGGTGACTTTTGATAA+TGG + chr7.3:4454240-4454259 MS.gene072561:CDS 40.0%
! TACAACAACACTTGGATTGG+CGG + chr7.3:4454542-4454561 MS.gene072561:CDS 40.0%
! TACTTGAACAACGGTTGGTT+GGG - chr7.3:4453060-4453079 None:intergenic 40.0%
! TAGGCATGTGATGGTGAATT+TGG - chr7.3:4452383-4452402 None:intergenic 40.0%
!! ATAGGTGTTGAGTCTTGAAG+AGG + chr7.3:4454731-4454750 MS.gene072561:intron 40.0%
!! ATGAAGGAGTGTTAGGACAA+TGG + chr7.3:4452895-4452914 MS.gene072561:intron 40.0%
!! CAGCCGGATTTTTAATTCCT+CGG + chr7.3:4452709-4452728 MS.gene072561:intron 40.0%
!! GACTTTCTAGTTTGTCAGCA+AGG + chr7.3:4454627-4454646 MS.gene072561:CDS 40.0%
!! TAGGTGTTGAGTCTTGAAGA+GGG + chr7.3:4454732-4454751 MS.gene072561:intron 40.0%
AAAAGAGGATTGGACAGCTG+AGG + chr7.3:4453420-4453439 MS.gene072561:CDS 45.0%
AAACGGTCAATTTCGGCTAG+GGG + chr7.3:4453576-4453595 MS.gene072561:CDS 45.0%
AAAGCAGTGTGGTGTAAGGT+TGG + chr7.3:4455680-4455699 MS.gene072561:CDS 45.0%
AAAGTCCAGGATCAAAGCTG+AGG + chr7.3:4453285-4453304 MS.gene072561:CDS 45.0%
AAATCAGCAACGCGTAGTCA+TGG + chr7.3:4453345-4453364 MS.gene072561:CDS 45.0%
AAGCAGTGTGGTGTAAGGTT+GGG + chr7.3:4455681-4455700 MS.gene072561:CDS 45.0%
AAGTCCAGGATCAAAGCTGA+GGG + chr7.3:4453286-4453305 MS.gene072561:CDS 45.0%
ACGTCTCCTTCCAAATGTGT+TGG - chr7.3:4453221-4453240 None:intergenic 45.0%
AGAAACGGTCAATTTCGGCT+AGG + chr7.3:4453574-4453593 MS.gene072561:CDS 45.0%
AGACATACCTTGGGTTTAGG+TGG - chr7.3:4451798-4451817 None:intergenic 45.0%
ATCATGTTGGAAAGTGGCAG+GGG + chr7.3:4452143-4452162 MS.gene072561:intron 45.0%
ATGAGGTATGGCGTCTGAAA+GGG + chr7.3:4453835-4453854 MS.gene072561:CDS 45.0%
CAAATTGCACCTCCAAGAGA+GGG + chr7.3:4453454-4453473 MS.gene072561:CDS 45.0%
CATCATGTTGGAAAGTGGCA+GGG + chr7.3:4452142-4452161 MS.gene072561:intron 45.0%
CCCTTACTTCGAAAACTGGT+AGG + chr7.3:4451605-4451624 MS.gene072561:intron 45.0%
CGAACATCCAGGACCTTAAA+AGG - chr7.3:4453658-4453677 None:intergenic 45.0%
CGAATCTCGGTGAACGAATT+TGG - chr7.3:4452341-4452360 None:intergenic 45.0%
CGGACCAGACAGATAGAATT+AGG - chr7.3:4454808-4454827 None:intergenic 45.0%
CTAGAAAGTCAGACTGTTGC+AGG - chr7.3:4454617-4454636 None:intergenic 45.0%
GAAACGGTCAATTTCGGCTA+GGG + chr7.3:4453575-4453594 MS.gene072561:CDS 45.0%
GAACGAATCTAGGCATGTGA+TGG - chr7.3:4452392-4452411 None:intergenic 45.0%
GAATAGCCACCTTCTACAAC+TGG - chr7.3:4455512-4455531 None:intergenic 45.0%
GCACTGGATCAACATAGATC+TGG - chr7.3:4455409-4455428 None:intergenic 45.0%
GGAACCCTTACTTCGAAAAC+TGG + chr7.3:4451601-4451620 MS.gene072561:CDS 45.0%
GGAGCAAGAAAGGTCTAAAG+GGG - chr7.3:4451664-4451683 None:intergenic 45.0%
GTTCCTCAACCAGATACAAG+AGG + chr7.3:4451762-4451781 MS.gene072561:intron 45.0%
GTTTAGTGACTGCCACAGAA+AGG - chr7.3:4455191-4455210 None:intergenic 45.0%
TATGAGGGATGCTATACACC+AGG - chr7.3:4455024-4455043 None:intergenic 45.0%
TCAAATTGCACCTCCAAGAG+AGG + chr7.3:4453453-4453472 MS.gene072561:CDS 45.0%
TCATCATGTTGGAAAGTGGC+AGG + chr7.3:4452141-4452160 MS.gene072561:intron 45.0%
TCGTCCATCGTTGAATGATG+AGG + chr7.3:4453818-4453837 MS.gene072561:CDS 45.0%
TGTAGAAGGTGGCTATTCGA+TGG + chr7.3:4455514-4455533 MS.gene072561:CDS 45.0%
TTAACTGCCGAGGAAATCCT+CGG + chr7.3:4452036-4452055 MS.gene072561:intron 45.0%
TTAACTGCCGAGGAAATCCT+CGG - chr7.3:4452055-4452036 None:intergenic 45.0%
TTATGAACAGTGCGAGAGAG+AGG + chr7.3:4452611-4452630 MS.gene072561:intron 45.0%
! AAAATACGCTTTTGCCCCCT+CGG - chr7.3:4452745-4452764 None:intergenic 45.0%
! TCTTCTTTTCCCTCTCTTGG+AGG - chr7.3:4453466-4453485 None:intergenic 45.0%
! TTTAAGGTCCTGGATGTTCG+AGG + chr7.3:4453658-4453677 MS.gene072561:CDS 45.0%
!! ACAACAACACTTGGATTGGC+GGG + chr7.3:4454543-4454562 MS.gene072561:CDS 45.0%
!! ACATGGTGATGGAGCAAGAA+AGG - chr7.3:4451674-4451693 None:intergenic 45.0%
!!! AAGCGAACCTTTTAAGGTCC+TGG + chr7.3:4453648-4453667 MS.gene072561:CDS 45.0%
!!! GACTGCGTTTTTTCTGACTG+CGG + chr7.3:4452545-4452564 MS.gene072561:intron 45.0%
!!! GCAGCCGGTTTTAAATTCCT+CGG - chr7.3:4452014-4452033 None:intergenic 45.0%
!! ATTAAAAAATTATGTAATTA+GGG - chr7.3:4452416-4452435 None:intergenic 5.0%
ATTGGAGTGTGCATTCGGGA+AGG + chr7.3:4453622-4453641 MS.gene072561:CDS 50.0%
CAACGCGTAGTCATGGAAGA+AGG + chr7.3:4453352-4453371 MS.gene072561:CDS 50.0%
CAAGCAAAAGGCGAATGCAG+TGG - chr7.3:4451582-4451601 None:intergenic 50.0%
CATACCTTGGGTTTAGGTGG+CGG - chr7.3:4451795-4451814 None:intergenic 50.0%
CGGTGAACGAATTTGGGCAT+GGG - chr7.3:4452334-4452353 None:intergenic 50.0%
GATGAGGTATGGCGTCTGAA+AGG + chr7.3:4453834-4453853 MS.gene072561:CDS 50.0%
GGCTCGCATGTTGCATACAT+AGG - chr7.3:4455560-4455579 None:intergenic 50.0%
GGTGAATCGCCTCTTGTATC+TGG - chr7.3:4451774-4451793 None:intergenic 50.0%
GTCCTGGATGTTCGAGGAAA+GGG + chr7.3:4453664-4453683 MS.gene072561:CDS 50.0%
GTTGGTTGGGTCAGACAAAC+TGG - chr7.3:4453047-4453066 None:intergenic 50.0%
TACCCTTTCCTCGAACATCC+AGG - chr7.3:4453669-4453688 None:intergenic 50.0%
TCGCCTCTTGTATCTGGTTG+AGG - chr7.3:4451768-4451787 None:intergenic 50.0%
TCGGTGAACGAATTTGGGCA+TGG - chr7.3:4452335-4452354 None:intergenic 50.0%
! CACTGCATTCGCCTTTTGCT+TGG + chr7.3:4451580-4451599 MS.gene072561:CDS 50.0%
! CGCTTAGTACTGCTGGTTGA+AGG - chr7.3:4451396-4451415 None:intergenic 50.0%
! CTTGTGTCATTGACAGCGCT+TGG + chr7.3:4454458-4454477 MS.gene072561:intron 50.0%
!! CAACAACACTTGGATTGGCG+GGG + chr7.3:4454544-4454563 MS.gene072561:CDS 50.0%
GCTCCGACGTGATTGTTTCG+TGG - chr7.3:4455449-4455468 None:intergenic 55.0%
GGTCCTGGATGTTCGAGGAA+AGG + chr7.3:4453663-4453682 MS.gene072561:CDS 55.0%
TCCAGGATCAAAGCTGAGGG+AGG + chr7.3:4453289-4453308 MS.gene072561:CDS 55.0%
TCCTCGGCAGTTAACTACCG+AGG + chr7.3:4452666-4452685 MS.gene072561:intron 55.0%
TCCTCGGCAGTTAACTACCG+AGG - chr7.3:4452685-4452666 None:intergenic 55.0%
TCCTCGGTAGTTAACTGCCG+AGG + chr7.3:4452052-4452071 MS.gene072561:intron 55.0%
TCCTCGGTAGTTAACTGCCG+AGG - chr7.3:4452071-4452052 None:intergenic 55.0%
TTCACCGCCACCTAAACCCA+AGG + chr7.3:4451788-4451807 MS.gene072561:CDS 55.0%
! ACCTCCCTCAGCTTTGATCC+TGG - chr7.3:4453293-4453312 None:intergenic 55.0%
! GACAAGCAGTTGGCCTCTCA+TGG + chr7.3:4453879-4453898 MS.gene072561:CDS 55.0%
! GTGTCATTGACAGCGCTTGG+TGG + chr7.3:4454461-4454480 MS.gene072561:intron 55.0%
AGTGGCAGGGGACGTGATTC+TGG + chr7.3:4452155-4452174 MS.gene072561:intron 60.0%
CCTCGGCAGTTAACTGCAGC+CGG + chr7.3:4452693-4452712 MS.gene072561:intron 60.0%
CCTCGGCAGTTAACTGCAGC+CGG - chr7.3:4452712-4452693 None:intergenic 60.0%
CCTCGGCAGTTAACTGCCGA+GGG + chr7.3:4451995-4452014 MS.gene072561:intron 60.0%
CCTCGGCAGTTAACTGCCGA+GGG - chr7.3:4452014-4451995 None:intergenic 60.0%
CTCGGCAGTTAACTGCCGAG+GGG + chr7.3:4451996-4452015 MS.gene072561:intron 60.0%
CTCGGCAGTTAACTGCCGAG+GGG - chr7.3:4452015-4451996 None:intergenic 60.0%
GCAGGGGACGTGATTCTGGA+AGG + chr7.3:4452159-4452178 MS.gene072561:intron 60.0%
TCCTCGGCAGTTAACTGCCG+AGG + chr7.3:4452725-4452744 MS.gene072561:intron 60.0%
TCCTCGGCAGTTAACTGCCG+AGG - chr7.3:4452744-4452725 None:intergenic 60.0%
TCGGCAGTTAACTGCCGAGG+GGG + chr7.3:4451997-4452016 MS.gene072561:intron 60.0%
TCGGCAGTTAACTGCCGAGG+GGG - chr7.3:4452016-4451997 None:intergenic 60.0%
CCCTCGGCAGTTAACTGCCG+AGG + chr7.3:4451994-4452013 MS.gene072561:intron 65.0%
CCCTCGGCAGTTAACTGCCG+AGG - chr7.3:4452013-4451994 None:intergenic 65.0%
CCGGCTGCAGTTAACTGCCG+AGG + chr7.3:4452026-4452045 MS.gene072561:intron 65.0%
CCGGCTGCAGTTAACTGCCG+AGG - chr7.3:4452045-4452026 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 4451324 4455781 4451324 ID=MS.gene072561
chr7.3 mRNA 4451324 4455781 4451324 ID=MS.gene072561.t1;Parent=MS.gene072561
chr7.3 exon 4451324 4451478 4451324 ID=MS.gene072561.t1.exon1;Parent=MS.gene072561.t1
chr7.3 CDS 4451324 4451478 4451324 ID=cds.MS.gene072561.t1;Parent=MS.gene072561.t1
chr7.3 exon 4451562 4451622 4451562 ID=MS.gene072561.t1.exon2;Parent=MS.gene072561.t1
chr7.3 CDS 4451562 4451622 4451562 ID=cds.MS.gene072561.t1;Parent=MS.gene072561.t1
chr7.3 exon 4451775 4451809 4451775 ID=MS.gene072561.t1.exon3;Parent=MS.gene072561.t1
chr7.3 CDS 4451775 4451809 4451775 ID=cds.MS.gene072561.t1;Parent=MS.gene072561.t1
chr7.3 exon 4453198 4453685 4453198 ID=MS.gene072561.t1.exon4;Parent=MS.gene072561.t1
chr7.3 CDS 4453198 4453685 4453198 ID=cds.MS.gene072561.t1;Parent=MS.gene072561.t1
chr7.3 exon 4453802 4453962 4453802 ID=MS.gene072561.t1.exon5;Parent=MS.gene072561.t1
chr7.3 CDS 4453802 4453962 4453802 ID=cds.MS.gene072561.t1;Parent=MS.gene072561.t1
chr7.3 exon 4454093 4454305 4454093 ID=MS.gene072561.t1.exon6;Parent=MS.gene072561.t1
chr7.3 CDS 4454093 4454305 4454093 ID=cds.MS.gene072561.t1;Parent=MS.gene072561.t1
chr7.3 exon 4454474 4454648 4454474 ID=MS.gene072561.t1.exon7;Parent=MS.gene072561.t1
chr7.3 CDS 4454474 4454648 4454474 ID=cds.MS.gene072561.t1;Parent=MS.gene072561.t1
chr7.3 exon 4455330 4455781 4455330 ID=MS.gene072561.t1.exon8;Parent=MS.gene072561.t1
chr7.3 CDS 4455330 4455781 4455330 ID=cds.MS.gene072561.t1;Parent=MS.gene072561.t1
Gene Sequence

>MS.gene072561

ATGGCATCGAAGAGGACATCTCATAGTGATAGTACTAGTCGTAGTTGTGATGACAAGGATCTTTATGTTCCTTCAACCAGCAGTACTAAGCGAATAAAACAACATCATGGGAACCGAGAAGAACAACAAAAGGAGATCCAACACCTTTTATTTCCGTATGTGTTTTATTTTTATTTGATGTACCTTTAAATGTTCCTTTCTTTCTTACTATTTGACTTGACTTCTTTTGTTTTTGCAGCACTATCAGATTCAGTGCCACTGCATTCGCCTTTTGCTTGGAACCCTTACTTCGAAAACTGGTAGGTAATTAACTAACCATTCACCCTCTTACTATATTCCCCTTTAGACCTTTCTTGCTCCATCACCATGTAGTATATACTATTACTAATTAATAATGGATACCAAACTTTGATACTACTAACTCTTATGTTCTGTTTTGTTCCTCAACCAGATACAAGAGGCGATTCACCGCCACCTAAACCCAAGGTATGTCTCTTTAATGCTTCTTTGTCAAATGTTTCCAGTCCATTCATTAAGAGGTTTGAATTTTGTTTTGTTTTTGTGAGAGTGAAAATAATTTACCCTTGTCTACTCCCAACATTTATAATAAGAAAATTGTTGTTCACACATTAAAGAAGACTGGGACACACATGTAAAATACGTTTTTGCCCCCTCGGCAGTTAACTGCCGAGGAATTTAAAACCGGCTGCAGTTAACTGCCGAGGAAATCCTCGGTAGTTAACTGCCGAGGAATATTGTTGATATTGTTATTTGTTGTTATTTGTTCTATCATGTTTTTTTTTAAGACAATATTGTTTCATCATGTTGGAAAGTGGCAGGGGACGTGATTCTGGAAGGAGTTTAGAAACATTAAACTCCAACACACAGGGAACTTCATTAAGCAAGCATTTGCAACACAAGCTTCAACACACACAAATCAAATTTGCAACACAAGCTTCAACACACACAAATCAAATCCAGAAAATCAATTGTCTTCAACACACAAACCCATGCCCAAATTCGTTCACCGAGATTCGCATACCCAAATTTGTAAATCCAAATTCACCATCACATGCCTAGATTCGTTCACCCTAATTACATAATTTTTTAATCTGAATTTGATTTTGAAATGGATCTGAAATTGATTGAGGTGGGAAGTGTAAAATGAATTTGATTTTGAAAATGGAAGATGATGAAGATGATTGCAGATTGCATTTTGCGGACTGCGTTTTTTCTGACTGCGGATTTATGGATTTTGGGAGAAGAAATGTTTTGTTTGTGAGGATGTTATGAACAGTGCGAGAGAGAGGAAGAGAAGATGAACAGTGAAAAAATTTCTGATTCCTCGGCAGTTAACTACCGAGGATTTCCTCGGCAGTTAACTGCAGCCGGATTTTTAATTCCTCGGCAGTTAACTGCCGAGGGGGCAAAAGCGTATTTTACATGTGTGTCCCAGCCTTCTCTAATGTGTCAATAGCAATTTTCTTATAATAATGGATTATAATAATTTAAGAGGTATGTCTCTCAAATTGTTTTTTATTTTTTATTATCAAAACGAATTATAATTTAATATGAAGGAGTGTTAGGACAATGGTTAAGAAAGTAAATATATAAATCTTGTGTTGAAAAGTGGTGAATTTAATGTTTTATAAATTTATAAATTATTATTTTTAATTTAAAACTATTACTTTCGTTTCTTTTAACTAATGTTTTTAGAACACCAGTTTGTCTGACCCAACCAACCGTTGTTCAAGTAAAAGTAAAGGCTACAAAATTTAAGACCGAAAGATATAAACTCAATTTCAATTTTAAATTACAATCATTTCACAAAGCAAAATTAATTATATTGATATTTGTTTTTGTTTGGAATTTAGTTGTGGATTGACGCTTATGTCCAACACATTTGGAAGGAGACGTTTGCAATTGTATTTCATGAACAAATTGCCAAACAGAATTTTCACAAAGTCCAGGATCAAAGCTGAGGGAGGTGAACCACTTCAAATTGAACTGCGTGATGTTGAAAATCAGCAACGCGTAGTCATGGAAGAAGGTTCCTCCATGAAGATCCAATTATGTGTCCTATATGGTGACTTTGAAAAAGAGGATTGGACAGCTGAGGAATTTAATACTCAAATTGCACCTCCAAGAGAGGGAAAAGAAGAACTGTTGAAAGGAAATGAATTCATTACACTAAGAAATGGAGTTGCTGATATCGACAAAGAGATTGAGTTTACAGATATATCAAAGGGAAGAAACGGTCAATTTCGGCTAGGGGTTAAAATAGTTCAATCAAATTCAATTGGAGTGTGCATTCGGGAAGGTAGAAGCGAACCTTTTAAGGTCCTGGATGTTCGAGGAAAGGGTAAGTTCTAAACCTCCGACAAATGTTAGTAATTAGCTATTAAAATAGGTATATGTGATCTCTTGACTTTGATTTTTATTACATTTTTTATGTGCTTTGACATTTGATCATTTCAGATTACGAGAAACACGATCGTCCATCGTTGAATGATGAGGTATGGCGTCTGAAAGGGATACGTAAAAATGGTAAACTTGACAAGCAGTTGGCCTCTCATGGAATACAAACTGTTAAGGATTTTTTAAGATTGTACATAACCAATGAAGCTTCATTAAGAGAGGTAAGAAAATATTTTGAAATATTATGTGTGGTATTATGATTCTTTACTTTAGCCCTAATACTTCTTTATTTAGTTGTTTGATACTTTTGACATTAATGTTGTATATGATTTTTTGGCTTTGGGAAAATAGAAAATAGGCAAGATTGCAAGGAATTCATGGAATACAATTGTTGCACATGCTAAAGATTGTGATGTAGACGATGCTGATGAGCGCTACATCTATTACGCAACTGAACAACCAATATCGTTCCTTGTCTTTAATGCAATTTATAAGGTTGTGGAGGTGACTTTTGATAATGGACAAAACGCTCGTTCTATTCAATCTCTAAACCAGCAAGAAAAGGTTTGTGTTTGCATCCTATATCATAATGTTGGTAGATCCCTTTGGCTGTGAATATTCAGAGTGGACCTTATATGGATTCTTAAATTTAGTGATTCATATCTTACCAAAATATAGTTGTGTATAGTACTCATATCTCTTATATGATCAAAACACTTGTGTCATTGACAGCGCTTGGTGGAAAGAGTTAAGCAACGTGCTTACAAACATTTCAATGATCGGAATCCATTGCCAATTGATACAACAACACTTGGATTGGCGGGGACATTGACAAGTGTACAAAATGCACAATATGACGGTCAAAATCAAGCCCTGCAACAGTCTGACTTTCTAGTTTGTCAGCAAGGTACTCTATAATCTATATATACACTTATATTCTGCATAAAACCTTTTGGATGCATTTCAAAACTGAAAAAGTCTCAAGTTGTATAGGTGTTGAGTCTTGAAGAGGGTATATAACTACGTTTAAAAACTACTAATTTTCAATTTTTTTCGTTGATATCCTAATTCTATCTGTCTGGTCCGTTAAATGCTTCTTTTACTAGTTGTGCCAGACTAACATTTTGTCTTGCAGATATATAAAAATTTGACAGTTACATAAGACAAATATTGTGAAATGTAGGCTAAGGTATTCAATTCAAGCATATATAAAACCGAAGTTATAGTGAAATGTAGCACATTGTTTCCTTTTCTATTTGTCCTGAAAACTAGTAATAATCCTGGTGTATAGCATCCCTCATATTTAAATACATGAAGAAATTCCGAGATAAAACATAGATTTGGTGAAATTTTGTTGTGTCATGGCATGTGTATTTATTTCTACCAGAAAACCAATAAATCAATATTATTACATATGTAAATAAATACAATACCAAACTTGACAAACCTTTCTGTGGCAGTCACTAAACTTTCTTGTTTGTCATATATGTGAGTTTTTGTTATAGTTTTTGTCTTATTTTTGTCGATCATGTTCTTAATATTGTATACTTTGCTCTAATATTTTAGTATTTTACTATATCTTGTACAGGTCAAAAAGAAATTGGGCAAAGTTATGTTCAACCATGTATCTCTACTTCATATGTTAATGAGGGAATGGATAATTACCAGATCTATGTTGATCCAGTGCCAGACATAAGAGAAATACCACGAAACAATCACGTCGGAGCTGAAATGTACATTGATGGGGATGGTTATGGATCACATTTTCCAGTTGTAGAAGGTGGCTATTCGATGGAGAATCTCATGAATGACTATCCTATGTATGCAACATGCGAGCCAGAAAATTACAACTTATATGGTTTCTCTGATGTAGCTGAGTGTAGCACCCATGTTAATATCCTCAATTCCTCTATGGATATATCAAGCAGTGATAAATCAAAAGCAGTGTGGTGTAAGGTTGGGATTGCTATCAAATGGGTCATATCAATAAGGGCTGCAGCTGCTGCCAAGAAGAATGCAAACTTGTTTTATTTTAACTAA

Protein sequence

>MS.gene072561.t1

MASKRTSHSDSTSRSCDDKDLYVPSTSSTKRIKQHHGNREEQQKEIQHLLFPTIRFSATAFAFCLEPLLRKLIQEAIHRHLNPSCGLTLMSNTFGRRRLQLYFMNKLPNRIFTKSRIKAEGGEPLQIELRDVENQQRVVMEEGSSMKIQLCVLYGDFEKEDWTAEEFNTQIAPPREGKEELLKGNEFITLRNGVADIDKEIEFTDISKGRNGQFRLGVKIVQSNSIGVCIREGRSEPFKVLDVRGKDYEKHDRPSLNDEVWRLKGIRKNGKLDKQLASHGIQTVKDFLRLYITNEASLREKIGKIARNSWNTIVAHAKDCDVDDADERYIYYATEQPISFLVFNAIYKVVEVTFDNGQNARSIQSLNQQEKRLVERVKQRAYKHFNDRNPLPIDTTTLGLAGTLTSVQNAQYDGQNQALQQSDFLVCQQGQKEIGQSYVQPCISTSYVNEGMDNYQIYVDPVPDIREIPRNNHVGAEMYIDGDGYGSHFPVVEGGYSMENLMNDYPMYATCEPENYNLYGFSDVAECSTHVNILNSSMDISSSDKSKAVWCKVGIAIKWVISIRAAAAAKKNANLFYFN