Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25715.t1 | KEH35215.1 | 87 | 368 | 45 | 1 | 5 | 369 | 267 | 634 | 1.20E-180 | 642.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25715.t1 | F4JXC5 | 57.8 | 367 | 150 | 3 | 5 | 367 | 410 | 775 | 5.7e-115 | 415.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25715.t1 | A0A072V0H9 | 87.0 | 368 | 45 | 1 | 5 | 369 | 282 | 649 | 8.6e-181 | 642.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene25715 | 0.812044 | 5.17E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene25715 | 0.812347 | 4.44E-51 | -1.69E-46 |
| MS.gene049369 | MS.gene25715 | 0.810994 | 8.74E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene25715 | 0.848445 | 6.10E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene25715 | 0.811636 | 6.34E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene25715 | 0.867838 | 1.02E-65 | -1.69E-46 |
| MS.gene050670 | MS.gene25715 | 0.838191 | 3.33E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene25715 | 0.852876 | 3.46E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene25715 | 0.838589 | 2.63E-57 | -1.69E-46 |
| MS.gene050950 | MS.gene25715 | 0.84534 | 4.32E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene25715 | 0.835663 | 1.47E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene25715 | 0.875277 | 3.50E-68 | -1.69E-46 |
| MS.gene051525 | MS.gene25715 | 0.835877 | 1.30E-56 | -1.69E-46 |
| MS.gene051612 | MS.gene25715 | 0.806374 | 8.49E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene25715 | 0.806782 | 6.96E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene25715 | 0.821204 | 4.57E-53 | -1.69E-46 |
| MS.gene052322 | MS.gene25715 | 0.802981 | 4.33E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene25715 | 0.812827 | 3.49E-51 | -1.69E-46 |
| MS.gene052414 | MS.gene25715 | 0.81779 | 2.75E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene25715 | 0.85737 | 1.71E-62 | -1.69E-46 |
| MS.gene052481 | MS.gene25715 | 0.808001 | 3.84E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene25715 | 0.85015 | 2.04E-60 | -1.69E-46 |
| MS.gene052503 | MS.gene25715 | 0.838206 | 3.30E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene25715 | 0.849912 | 2.38E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene25715 | 0.830286 | 3.20E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene25715 | 0.829422 | 5.19E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene25715 | 0.818268 | 2.14E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene25715 | 0.801632 | 8.22E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene25715 | 0.812915 | 3.33E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene25715 | 0.828257 | 9.94E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene25715 | 0.818478 | 1.92E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene25715 | 0.822036 | 2.94E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene25715 | 0.816704 | 4.82E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene25715 | 0.849252 | 3.64E-60 | -1.69E-46 |
| MS.gene053873 | MS.gene25715 | 0.809026 | 2.32E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene25715 | 0.833521 | 5.08E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene25715 | 0.839972 | 1.15E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene25715 | 0.828318 | 9.61E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene25715 | 0.816036 | 6.80E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene25715 | 0.809255 | 2.07E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene25715 | 0.826864 | 2.15E-54 | -1.69E-46 |
| MS.gene055909 | MS.gene25715 | 0.843176 | 1.65E-58 | -1.69E-46 |
| MS.gene055911 | MS.gene25715 | 0.841829 | 3.75E-58 | -1.69E-46 |
| MS.gene056166 | MS.gene25715 | 0.82325 | 1.53E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene25715 | 0.816122 | 6.51E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene25715 | 0.805291 | 1.43E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene25715 | 0.800512 | 1.39E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene25715 | 0.86043 | 2.08E-63 | -1.69E-46 |
| MS.gene056514 | MS.gene25715 | 0.800513 | 1.39E-48 | -1.69E-46 |
| MS.gene05664 | MS.gene25715 | 0.828449 | 8.93E-55 | -1.69E-46 |
| MS.gene05666 | MS.gene25715 | 0.828998 | 6.58E-55 | -1.69E-46 |
| MS.gene056877 | MS.gene25715 | 0.8256 | 4.29E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene25715 | 0.822293 | 2.56E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene25715 | 0.833139 | 6.33E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene25715 | 0.855106 | 7.88E-62 | -1.69E-46 |
| MS.gene057658 | MS.gene25715 | 0.809916 | 1.49E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene25715 | 0.83177 | 1.38E-55 | -1.69E-46 |
| MS.gene057823 | MS.gene25715 | 0.800703 | 1.27E-48 | -1.69E-46 |
| MS.gene057856 | MS.gene25715 | 0.835428 | 1.69E-56 | -1.69E-46 |
| MS.gene058007 | MS.gene25715 | 0.837249 | 5.81E-57 | -1.69E-46 |
| MS.gene058019 | MS.gene25715 | 0.846789 | 1.74E-59 | -1.69E-46 |
| MS.gene058376 | MS.gene25715 | 0.849559 | 2.99E-60 | -1.69E-46 |
| MS.gene058444 | MS.gene25715 | 0.838815 | 2.30E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene25715 | 0.801196 | 1.01E-48 | -1.69E-46 |
| MS.gene058700 | MS.gene25715 | 0.865073 | 7.69E-65 | -1.69E-46 |
| MS.gene05883 | MS.gene25715 | 0.833111 | 6.43E-56 | -1.69E-46 |
| MS.gene058995 | MS.gene25715 | 0.821364 | 4.20E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene25715 | 0.801541 | 8.58E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene25715 | 0.839359 | 1.66E-57 | -1.69E-46 |
| MS.gene059455 | MS.gene25715 | 0.844113 | 9.25E-59 | -1.69E-46 |
| MS.gene059536 | MS.gene25715 | 0.835142 | 1.99E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene25715 | 0.826347 | 2.85E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene25715 | 0.805406 | 1.36E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene25715 | 0.805484 | 1.31E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene25715 | 0.801533 | 8.61E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene25715 | 0.859529 | 3.88E-63 | -1.69E-46 |
| MS.gene060482 | MS.gene25715 | 0.808802 | 2.59E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene25715 | 0.850792 | 1.35E-60 | -1.69E-46 |
| MS.gene060835 | MS.gene25715 | 0.837776 | 4.26E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene25715 | 0.847012 | 1.51E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene25715 | 0.809654 | 1.70E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene25715 | 0.800367 | 1.49E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25715.t1 | MTR_3g082200 | 86.957 | 368 | 45 | 1 | 5 | 369 | 267 | 634 | 0.0 | 660 |
| MS.gene25715.t1 | MTR_3g082200 | 86.957 | 368 | 45 | 1 | 5 | 369 | 282 | 649 | 0.0 | 660 |
| MS.gene25715.t1 | MTR_3g082200 | 86.957 | 368 | 45 | 1 | 5 | 369 | 405 | 772 | 0.0 | 660 |
| MS.gene25715.t1 | MTR_4g134320 | 55.795 | 371 | 156 | 4 | 3 | 369 | 402 | 768 | 1.35e-148 | 438 |
| MS.gene25715.t1 | MTR_7g098070 | 55.556 | 369 | 156 | 4 | 5 | 369 | 400 | 764 | 4.40e-144 | 427 |
| MS.gene25715.t1 | MTR_4g103495 | 54.201 | 369 | 163 | 3 | 5 | 367 | 256 | 624 | 2.03e-140 | 413 |
| MS.gene25715.t1 | MTR_5g055920 | 53.887 | 373 | 166 | 3 | 1 | 367 | 295 | 667 | 2.08e-138 | 409 |
| MS.gene25715.t1 | MTR_4g103480 | 53.930 | 369 | 164 | 3 | 5 | 367 | 419 | 787 | 2.60e-137 | 410 |
| MS.gene25715.t1 | MTR_4g103450 | 53.659 | 369 | 165 | 3 | 5 | 367 | 376 | 744 | 3.46e-135 | 403 |
| MS.gene25715.t1 | MTR_4g103490 | 53.117 | 369 | 167 | 3 | 5 | 367 | 416 | 784 | 1.96e-134 | 402 |
| MS.gene25715.t1 | MTR_4g103400 | 52.861 | 367 | 161 | 4 | 6 | 360 | 403 | 769 | 2.07e-132 | 397 |
| MS.gene25715.t1 | MTR_3g061110 | 53.639 | 371 | 165 | 3 | 3 | 367 | 384 | 753 | 3.17e-132 | 396 |
| MS.gene25715.t1 | MTR_4g103430 | 50.943 | 371 | 176 | 3 | 2 | 366 | 398 | 768 | 1.01e-129 | 390 |
| MS.gene25715.t1 | MTR_5g096750 | 51.482 | 371 | 165 | 4 | 3 | 367 | 404 | 765 | 3.77e-125 | 378 |
| MS.gene25715.t1 | MTR_4g103495 | 55.625 | 320 | 137 | 2 | 5 | 319 | 405 | 724 | 2.83e-122 | 370 |
| MS.gene25715.t1 | MTR_5g085690 | 49.344 | 381 | 173 | 5 | 3 | 366 | 411 | 788 | 3.11e-114 | 350 |
| MS.gene25715.t1 | MTR_7g081420 | 47.423 | 388 | 172 | 9 | 3 | 367 | 407 | 785 | 8.41e-106 | 328 |
| MS.gene25715.t1 | MTR_7g081750 | 46.766 | 402 | 168 | 9 | 3 | 367 | 406 | 798 | 2.87e-104 | 325 |
| MS.gene25715.t1 | MTR_7g081580 | 47.520 | 383 | 182 | 9 | 1 | 367 | 405 | 784 | 8.22e-104 | 323 |
| MS.gene25715.t1 | MTR_0047s0120 | 44.324 | 370 | 194 | 7 | 6 | 364 | 386 | 754 | 3.22e-99 | 310 |
| MS.gene25715.t1 | MTR_5g016120 | 44.892 | 372 | 191 | 7 | 6 | 365 | 390 | 759 | 5.85e-99 | 310 |
| MS.gene25715.t1 | MTR_7g481600 | 45.692 | 383 | 189 | 9 | 1 | 367 | 405 | 784 | 2.85e-98 | 309 |
| MS.gene25715.t1 | MTR_7g075900 | 42.513 | 374 | 202 | 7 | 5 | 366 | 399 | 771 | 3.76e-97 | 305 |
| MS.gene25715.t1 | MTR_7g081380 | 44.500 | 400 | 184 | 10 | 3 | 367 | 411 | 807 | 6.15e-96 | 303 |
| MS.gene25715.t1 | MTR_7g081500 | 47.493 | 379 | 184 | 9 | 3 | 367 | 406 | 783 | 8.34e-96 | 302 |
| MS.gene25715.t1 | MTR_2g042130 | 43.968 | 373 | 197 | 8 | 3 | 364 | 399 | 770 | 1.96e-94 | 298 |
| MS.gene25715.t1 | MTR_4g073540 | 42.597 | 385 | 204 | 8 | 1 | 369 | 387 | 770 | 5.61e-93 | 295 |
| MS.gene25715.t1 | MTR_8g021130 | 43.342 | 383 | 196 | 9 | 3 | 367 | 396 | 775 | 9.61e-93 | 294 |
| MS.gene25715.t1 | MTR_3g102810 | 41.270 | 378 | 204 | 6 | 5 | 365 | 377 | 753 | 2.49e-92 | 292 |
| MS.gene25715.t1 | MTR_8g022870 | 43.194 | 382 | 197 | 8 | 5 | 366 | 394 | 775 | 6.94e-92 | 292 |
| MS.gene25715.t1 | MTR_4g095360 | 40.751 | 373 | 209 | 7 | 5 | 366 | 383 | 754 | 2.84e-90 | 287 |
| MS.gene25715.t1 | MTR_4g125180 | 42.895 | 373 | 201 | 8 | 3 | 364 | 378 | 749 | 2.96e-90 | 287 |
| MS.gene25715.t1 | MTR_5g025010 | 42.400 | 375 | 194 | 7 | 2 | 367 | 357 | 718 | 4.14e-89 | 283 |
| MS.gene25715.t1 | MTR_5g025010 | 42.400 | 375 | 194 | 7 | 2 | 367 | 389 | 750 | 9.81e-89 | 283 |
| MS.gene25715.t1 | MTR_1g102350 | 41.711 | 374 | 203 | 8 | 5 | 366 | 406 | 776 | 3.97e-88 | 282 |
| MS.gene25715.t1 | MTR_1g018510 | 41.099 | 382 | 201 | 7 | 5 | 364 | 344 | 723 | 6.47e-88 | 280 |
| MS.gene25715.t1 | MTR_2g018135 | 41.711 | 374 | 204 | 6 | 3 | 366 | 413 | 782 | 9.97e-88 | 281 |
| MS.gene25715.t1 | MTR_4g102400 | 41.979 | 374 | 203 | 8 | 1 | 366 | 385 | 752 | 7.04e-84 | 270 |
| MS.gene25715.t1 | MTR_8g072440 | 39.788 | 377 | 199 | 10 | 2 | 367 | 352 | 711 | 1.57e-83 | 268 |
| MS.gene25715.t1 | MTR_7g098630 | 40.731 | 383 | 210 | 7 | 2 | 368 | 381 | 762 | 3.02e-83 | 271 |
| MS.gene25715.t1 | MTR_8g072440 | 39.788 | 377 | 199 | 10 | 2 | 367 | 394 | 753 | 3.48e-83 | 268 |
| MS.gene25715.t1 | MTR_8g083220 | 39.314 | 379 | 204 | 9 | 3 | 369 | 413 | 777 | 5.16e-82 | 266 |
| MS.gene25715.t1 | MTR_2g018125 | 39.840 | 374 | 211 | 6 | 3 | 366 | 414 | 783 | 9.92e-82 | 265 |
| MS.gene25715.t1 | MTR_4g053630 | 40.000 | 375 | 211 | 9 | 3 | 369 | 287 | 655 | 7.71e-81 | 260 |
| MS.gene25715.t1 | MTR_4g053630 | 40.000 | 375 | 211 | 9 | 3 | 369 | 364 | 732 | 3.06e-80 | 260 |
| MS.gene25715.t1 | MTR_5g011310 | 40.162 | 371 | 206 | 5 | 5 | 366 | 390 | 753 | 1.55e-77 | 253 |
| MS.gene25715.t1 | MTR_5g011190 | 41.398 | 372 | 200 | 6 | 5 | 366 | 390 | 753 | 2.64e-77 | 253 |
| MS.gene25715.t1 | MTR_5g011340 | 40.701 | 371 | 204 | 5 | 5 | 366 | 387 | 750 | 4.23e-77 | 252 |
| MS.gene25715.t1 | MTR_5g011370 | 41.129 | 372 | 201 | 6 | 5 | 366 | 410 | 773 | 4.33e-76 | 250 |
| MS.gene25715.t1 | MTR_5g011320 | 40.000 | 370 | 207 | 5 | 5 | 366 | 383 | 745 | 1.89e-75 | 248 |
| MS.gene25715.t1 | MTR_4g053635 | 38.830 | 376 | 211 | 12 | 3 | 369 | 310 | 675 | 3.11e-75 | 246 |
| MS.gene25715.t1 | MTR_8g042670 | 37.401 | 377 | 219 | 8 | 2 | 367 | 264 | 634 | 2.96e-74 | 242 |
| MS.gene25715.t1 | MTR_3g104930 | 38.727 | 377 | 210 | 10 | 6 | 366 | 390 | 761 | 5.62e-74 | 244 |
| MS.gene25715.t1 | MTR_8g042670 | 37.401 | 377 | 219 | 8 | 2 | 367 | 388 | 758 | 3.62e-73 | 242 |
| MS.gene25715.t1 | MTR_8g042710 | 36.412 | 379 | 223 | 10 | 2 | 367 | 391 | 764 | 3.90e-73 | 242 |
| MS.gene25715.t1 | MTR_8g005710 | 38.522 | 379 | 199 | 14 | 4 | 369 | 344 | 701 | 4.76e-72 | 238 |
| MS.gene25715.t1 | MTR_5g011260 | 38.814 | 371 | 211 | 5 | 5 | 366 | 388 | 751 | 7.04e-72 | 238 |
| MS.gene25715.t1 | MTR_5g011270 | 39.084 | 371 | 210 | 5 | 5 | 366 | 388 | 751 | 3.17e-71 | 236 |
| MS.gene25715.t1 | MTR_7g034380 | 38.196 | 377 | 201 | 13 | 3 | 367 | 336 | 692 | 1.75e-70 | 233 |
| MS.gene25715.t1 | MTR_1g048110 | 37.398 | 369 | 202 | 12 | 12 | 369 | 383 | 733 | 3.14e-70 | 233 |
| MS.gene25715.t1 | MTR_1g006990 | 38.043 | 368 | 201 | 13 | 12 | 369 | 387 | 737 | 6.36e-69 | 230 |
| MS.gene25715.t1 | MTR_1g007030 | 37.772 | 368 | 202 | 13 | 12 | 369 | 385 | 735 | 8.86e-69 | 229 |
| MS.gene25715.t1 | MTR_1g078110 | 39.633 | 381 | 206 | 11 | 5 | 369 | 384 | 756 | 1.31e-67 | 227 |
| MS.gene25715.t1 | MTR_8g079900 | 36.559 | 372 | 214 | 9 | 3 | 366 | 286 | 643 | 2.03e-67 | 224 |
| MS.gene25715.t1 | MTR_8g079900 | 36.559 | 372 | 214 | 9 | 3 | 366 | 384 | 741 | 8.58e-67 | 224 |
| MS.gene25715.t1 | MTR_3g114420 | 39.498 | 319 | 180 | 6 | 61 | 369 | 452 | 767 | 1.08e-66 | 224 |
| MS.gene25715.t1 | MTR_5g011280 | 37.903 | 372 | 214 | 6 | 5 | 366 | 391 | 755 | 1.58e-66 | 224 |
| MS.gene25715.t1 | MTR_6g055570 | 38.005 | 371 | 201 | 14 | 11 | 369 | 379 | 732 | 2.43e-66 | 223 |
| MS.gene25715.t1 | MTR_8g006680 | 39.623 | 371 | 186 | 14 | 11 | 369 | 381 | 725 | 4.06e-66 | 223 |
| MS.gene25715.t1 | MTR_8g005300 | 39.623 | 371 | 186 | 14 | 11 | 369 | 381 | 725 | 4.06e-66 | 223 |
| MS.gene25715.t1 | MTR_8g005640 | 39.623 | 371 | 186 | 14 | 11 | 369 | 381 | 725 | 4.06e-66 | 223 |
| MS.gene25715.t1 | MTR_8g024420 | 38.978 | 372 | 200 | 12 | 15 | 366 | 357 | 721 | 5.86e-66 | 222 |
| MS.gene25715.t1 | MTR_2g042650 | 37.105 | 380 | 173 | 13 | 11 | 369 | 311 | 645 | 1.05e-65 | 220 |
| MS.gene25715.t1 | MTR_8g027260 | 40.000 | 305 | 167 | 7 | 72 | 369 | 359 | 654 | 2.32e-65 | 219 |
| MS.gene25715.t1 | MTR_2g049200 | 39.481 | 385 | 201 | 13 | 5 | 369 | 386 | 758 | 9.32e-65 | 219 |
| MS.gene25715.t1 | MTR_8g033150 | 36.800 | 375 | 209 | 13 | 3 | 366 | 367 | 724 | 1.05e-64 | 219 |
| MS.gene25715.t1 | MTR_8g033150 | 36.800 | 375 | 209 | 13 | 3 | 366 | 394 | 751 | 1.53e-64 | 219 |
| MS.gene25715.t1 | MTR_3g464790 | 37.752 | 347 | 190 | 7 | 30 | 366 | 401 | 731 | 2.81e-63 | 215 |
| MS.gene25715.t1 | MTR_7g075890 | 34.817 | 382 | 207 | 11 | 3 | 366 | 540 | 897 | 3.89e-63 | 217 |
| MS.gene25715.t1 | MTR_8g024390 | 37.270 | 381 | 213 | 11 | 5 | 366 | 384 | 757 | 4.83e-63 | 215 |
| MS.gene25715.t1 | MTR_1g079120 | 40.793 | 353 | 172 | 13 | 37 | 366 | 422 | 760 | 7.38e-62 | 211 |
| MS.gene25715.t1 | MTR_8g024380 | 38.776 | 392 | 192 | 15 | 5 | 366 | 385 | 758 | 2.27e-61 | 210 |
| MS.gene25715.t1 | MTR_3g010080 | 35.946 | 370 | 209 | 13 | 11 | 369 | 382 | 734 | 1.99e-60 | 207 |
| MS.gene25715.t1 | MTR_7g118080 | 36.997 | 373 | 210 | 9 | 15 | 369 | 393 | 758 | 1.36e-59 | 205 |
| MS.gene25715.t1 | MTR_6g055410 | 35.092 | 379 | 195 | 16 | 4 | 369 | 374 | 714 | 1.05e-58 | 202 |
| MS.gene25715.t1 | MTR_7g079310 | 40.777 | 309 | 167 | 11 | 70 | 366 | 459 | 763 | 3.81e-57 | 199 |
| MS.gene25715.t1 | MTR_2g044630 | 36.957 | 368 | 182 | 15 | 11 | 366 | 376 | 705 | 1.30e-56 | 196 |
| MS.gene25715.t1 | MTR_7g079300 | 40.379 | 317 | 174 | 10 | 62 | 366 | 452 | 765 | 1.07e-55 | 195 |
| MS.gene25715.t1 | MTR_8g024370 | 36.579 | 380 | 219 | 11 | 5 | 366 | 381 | 756 | 3.92e-55 | 193 |
| MS.gene25715.t1 | MTR_7g104200 | 35.561 | 374 | 211 | 10 | 6 | 366 | 385 | 741 | 4.99e-55 | 192 |
| MS.gene25715.t1 | MTR_6g075370 | 32.143 | 364 | 165 | 10 | 2 | 355 | 384 | 675 | 3.15e-52 | 184 |
| MS.gene25715.t1 | MTR_2g042640 | 37.003 | 327 | 150 | 12 | 11 | 328 | 332 | 611 | 7.91e-50 | 176 |
| MS.gene25715.t1 | MTR_4g127480 | 34.243 | 403 | 218 | 15 | 6 | 369 | 422 | 816 | 1.00e-49 | 179 |
| MS.gene25715.t1 | MTR_2g037850 | 34.000 | 400 | 213 | 16 | 6 | 364 | 422 | 811 | 9.30e-46 | 167 |
| MS.gene25715.t1 | MTR_3g452290 | 29.810 | 369 | 177 | 11 | 4 | 369 | 282 | 571 | 4.54e-42 | 155 |
| MS.gene25715.t1 | MTR_3g451220 | 29.810 | 369 | 177 | 11 | 4 | 369 | 282 | 571 | 4.54e-42 | 155 |
| MS.gene25715.t1 | MTR_8g089230 | 31.017 | 403 | 227 | 16 | 6 | 366 | 452 | 845 | 2.84e-41 | 154 |
| MS.gene25715.t1 | MTR_7g081660 | 45.304 | 181 | 95 | 4 | 190 | 367 | 374 | 553 | 7.21e-40 | 149 |
| MS.gene25715.t1 | MTR_3g114140 | 36.680 | 259 | 149 | 7 | 78 | 325 | 169 | 423 | 1.19e-39 | 145 |
| MS.gene25715.t1 | MTR_8g042710 | 37.186 | 199 | 115 | 6 | 2 | 193 | 391 | 586 | 6.60e-36 | 138 |
| MS.gene25715.t1 | MTR_3g114410 | 39.899 | 198 | 106 | 4 | 2 | 192 | 390 | 581 | 1.03e-35 | 137 |
| MS.gene25715.t1 | MTR_2g070260 | 37.931 | 203 | 112 | 6 | 160 | 356 | 1 | 195 | 1.32e-35 | 129 |
| MS.gene25715.t1 | MTR_4g132620 | 32.000 | 275 | 164 | 9 | 100 | 360 | 542 | 807 | 1.51e-35 | 138 |
| MS.gene25715.t1 | MTR_4g053665 | 32.540 | 252 | 130 | 7 | 119 | 369 | 1 | 213 | 1.59e-34 | 127 |
| MS.gene25715.t1 | MTR_4g126230 | 31.783 | 258 | 155 | 8 | 47 | 295 | 3 | 248 | 4.04e-34 | 126 |
| MS.gene25715.t1 | MTR_2g046740 | 31.724 | 290 | 162 | 10 | 100 | 366 | 562 | 838 | 1.76e-33 | 132 |
| MS.gene25715.t1 | MTR_4g071560 | 33.645 | 214 | 134 | 3 | 3 | 209 | 325 | 537 | 7.23e-33 | 129 |
| MS.gene25715.t1 | MTR_5g081130 | 35.758 | 165 | 96 | 4 | 209 | 366 | 11 | 172 | 4.83e-27 | 106 |
| MS.gene25715.t1 | MTR_5g044060 | 43.511 | 131 | 62 | 3 | 98 | 221 | 11 | 136 | 9.90e-25 | 99.8 |
| MS.gene25715.t1 | MTR_8g027660 | 31.884 | 207 | 113 | 6 | 171 | 369 | 63 | 249 | 3.40e-22 | 94.7 |
| MS.gene25715.t1 | MTR_5g011300 | 50.515 | 97 | 48 | 0 | 160 | 256 | 1 | 97 | 8.22e-22 | 89.4 |
| MS.gene25715.t1 | MTR_4g118440 | 28.745 | 247 | 118 | 11 | 118 | 355 | 1 | 198 | 2.85e-20 | 88.6 |
| MS.gene25715.t1 | MTR_7g079295 | 38.217 | 157 | 86 | 6 | 218 | 366 | 356 | 509 | 1.97e-17 | 84.0 |
| MS.gene25715.t1 | MTR_3g114400 | 30.168 | 179 | 94 | 7 | 200 | 366 | 3 | 162 | 2.49e-12 | 65.1 |
| MS.gene25715.t1 | MTR_3g005755 | 46.575 | 73 | 33 | 3 | 150 | 218 | 236 | 306 | 3.88e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25715.t1 | AT2G04160 | 58.065 | 372 | 151 | 3 | 1 | 367 | 400 | 771 | 1.14e-145 | 431 |
| MS.gene25715.t1 | AT5G59810 | 57.766 | 367 | 150 | 3 | 5 | 367 | 410 | 775 | 1.18e-140 | 418 |
| MS.gene25715.t1 | AT5G67360 | 45.822 | 371 | 191 | 6 | 5 | 366 | 385 | 754 | 2.18e-106 | 329 |
| MS.gene25715.t1 | AT2G05920 | 45.040 | 373 | 192 | 8 | 3 | 364 | 377 | 747 | 1.78e-97 | 306 |
| MS.gene25715.t1 | AT4G34980 | 41.842 | 380 | 205 | 8 | 3 | 366 | 379 | 758 | 2.92e-92 | 292 |
| MS.gene25715.t1 | AT3G14240 | 41.969 | 386 | 202 | 7 | 3 | 366 | 384 | 769 | 6.03e-90 | 286 |
| MS.gene25715.t1 | AT3G14067 | 41.775 | 383 | 205 | 7 | 3 | 367 | 386 | 768 | 7.55e-89 | 284 |
| MS.gene25715.t1 | AT1G01900 | 41.379 | 377 | 205 | 6 | 5 | 366 | 396 | 771 | 3.64e-84 | 271 |
| MS.gene25715.t1 | AT5G45650 | 39.247 | 372 | 210 | 5 | 6 | 366 | 422 | 788 | 1.73e-82 | 267 |
| MS.gene25715.t1 | AT5G45650 | 39.247 | 372 | 210 | 5 | 6 | 366 | 422 | 788 | 1.73e-82 | 267 |
| MS.gene25715.t1 | AT5G51750 | 38.830 | 376 | 216 | 7 | 3 | 366 | 401 | 774 | 4.35e-81 | 263 |
| MS.gene25715.t1 | AT1G04110 | 40.106 | 379 | 211 | 7 | 3 | 366 | 393 | 770 | 2.73e-80 | 261 |
| MS.gene25715.t1 | AT5G59090 | 42.513 | 374 | 184 | 13 | 5 | 366 | 372 | 726 | 4.61e-78 | 254 |
| MS.gene25715.t1 | AT5G59090 | 42.513 | 374 | 184 | 13 | 5 | 366 | 374 | 728 | 4.78e-78 | 254 |
| MS.gene25715.t1 | AT1G20160 | 38.583 | 381 | 214 | 9 | 3 | 368 | 349 | 724 | 1.17e-77 | 253 |
| MS.gene25715.t1 | AT5G59090 | 42.513 | 374 | 179 | 13 | 5 | 366 | 374 | 723 | 1.41e-77 | 253 |
| MS.gene25715.t1 | AT1G20160 | 38.583 | 381 | 214 | 9 | 3 | 368 | 388 | 763 | 2.64e-77 | 253 |
| MS.gene25715.t1 | AT5G59100 | 39.578 | 379 | 202 | 11 | 2 | 369 | 378 | 740 | 2.36e-76 | 250 |
| MS.gene25715.t1 | AT3G46850 | 39.785 | 372 | 199 | 11 | 5 | 368 | 382 | 736 | 9.77e-72 | 238 |
| MS.gene25715.t1 | AT3G46840 | 39.623 | 371 | 201 | 10 | 5 | 368 | 382 | 736 | 1.27e-71 | 237 |
| MS.gene25715.t1 | AT5G59120 | 40.642 | 374 | 191 | 13 | 5 | 366 | 373 | 727 | 1.28e-71 | 237 |
| MS.gene25715.t1 | AT5G58840 | 39.726 | 365 | 193 | 10 | 9 | 366 | 362 | 706 | 6.04e-70 | 232 |
| MS.gene25715.t1 | AT4G10520 | 38.611 | 360 | 201 | 10 | 16 | 367 | 398 | 745 | 3.93e-69 | 231 |
| MS.gene25715.t1 | AT4G10550 | 40.164 | 366 | 196 | 12 | 13 | 367 | 358 | 711 | 8.83e-69 | 229 |
| MS.gene25715.t1 | AT4G10550 | 40.164 | 366 | 196 | 12 | 13 | 367 | 358 | 711 | 8.83e-69 | 229 |
| MS.gene25715.t1 | AT4G10550 | 40.164 | 366 | 196 | 12 | 13 | 367 | 414 | 767 | 1.62e-68 | 230 |
| MS.gene25715.t1 | AT4G10550 | 40.164 | 366 | 196 | 12 | 13 | 367 | 430 | 783 | 2.26e-68 | 229 |
| MS.gene25715.t1 | AT4G10540 | 42.262 | 336 | 178 | 10 | 37 | 367 | 440 | 764 | 2.68e-68 | 229 |
| MS.gene25715.t1 | AT5G45640 | 36.317 | 391 | 202 | 10 | 5 | 369 | 385 | 754 | 3.59e-68 | 228 |
| MS.gene25715.t1 | AT5G11940 | 38.674 | 362 | 200 | 8 | 17 | 367 | 403 | 753 | 1.17e-67 | 227 |
| MS.gene25715.t1 | AT4G21650 | 42.560 | 336 | 175 | 11 | 38 | 367 | 438 | 761 | 1.34e-67 | 227 |
| MS.gene25715.t1 | AT4G00230 | 36.800 | 375 | 210 | 11 | 3 | 366 | 385 | 743 | 2.58e-67 | 226 |
| MS.gene25715.t1 | AT4G21640 | 41.420 | 338 | 174 | 9 | 38 | 367 | 407 | 728 | 9.78e-67 | 224 |
| MS.gene25715.t1 | AT4G21630 | 40.822 | 365 | 191 | 13 | 12 | 367 | 406 | 754 | 1.41e-66 | 224 |
| MS.gene25715.t1 | AT4G26330 | 38.769 | 325 | 188 | 6 | 52 | 366 | 398 | 721 | 2.27e-66 | 223 |
| MS.gene25715.t1 | AT4G26330 | 38.769 | 325 | 188 | 6 | 52 | 366 | 412 | 735 | 2.39e-66 | 223 |
| MS.gene25715.t1 | AT5G58830 | 37.637 | 364 | 198 | 9 | 11 | 366 | 363 | 705 | 5.50e-66 | 222 |
| MS.gene25715.t1 | AT5G59130 | 39.566 | 369 | 195 | 12 | 6 | 366 | 338 | 686 | 5.75e-66 | 221 |
| MS.gene25715.t1 | AT5G59130 | 39.566 | 369 | 195 | 12 | 6 | 366 | 377 | 725 | 1.45e-65 | 221 |
| MS.gene25715.t1 | AT5G59130 | 39.566 | 369 | 195 | 12 | 6 | 366 | 373 | 721 | 1.60e-65 | 221 |
| MS.gene25715.t1 | AT1G66210 | 39.071 | 366 | 198 | 12 | 11 | 367 | 402 | 751 | 4.48e-65 | 220 |
| MS.gene25715.t1 | AT1G32970 | 39.118 | 363 | 198 | 12 | 16 | 367 | 373 | 723 | 1.31e-64 | 218 |
| MS.gene25715.t1 | AT4G10510 | 39.344 | 366 | 200 | 11 | 13 | 367 | 341 | 695 | 1.49e-64 | 218 |
| MS.gene25715.t1 | AT4G10510 | 39.344 | 366 | 200 | 11 | 13 | 367 | 356 | 710 | 1.76e-64 | 218 |
| MS.gene25715.t1 | AT4G10510 | 39.344 | 366 | 200 | 11 | 13 | 367 | 400 | 754 | 3.59e-64 | 218 |
| MS.gene25715.t1 | AT4G10510 | 39.344 | 366 | 200 | 11 | 13 | 367 | 412 | 766 | 4.88e-64 | 218 |
| MS.gene25715.t1 | AT5G58820 | 39.403 | 335 | 182 | 9 | 39 | 366 | 380 | 700 | 2.03e-63 | 215 |
| MS.gene25715.t1 | AT1G20150 | 36.364 | 385 | 218 | 11 | 3 | 366 | 392 | 770 | 6.58e-63 | 214 |
| MS.gene25715.t1 | AT1G66220 | 34.688 | 369 | 209 | 10 | 10 | 367 | 398 | 745 | 9.11e-63 | 214 |
| MS.gene25715.t1 | AT5G03620 | 36.154 | 390 | 201 | 10 | 6 | 366 | 388 | 758 | 1.04e-62 | 214 |
| MS.gene25715.t1 | AT1G32940 | 38.196 | 377 | 210 | 11 | 3 | 367 | 347 | 712 | 2.06e-62 | 213 |
| MS.gene25715.t1 | AT1G32940 | 38.196 | 377 | 210 | 11 | 3 | 367 | 347 | 712 | 2.06e-62 | 213 |
| MS.gene25715.t1 | AT5G59190 | 35.714 | 378 | 215 | 12 | 2 | 369 | 332 | 691 | 4.33e-62 | 211 |
| MS.gene25715.t1 | AT1G32940 | 38.196 | 377 | 210 | 11 | 3 | 367 | 398 | 763 | 5.49e-62 | 212 |
| MS.gene25715.t1 | AT1G32950 | 37.666 | 377 | 212 | 11 | 3 | 367 | 346 | 711 | 1.32e-61 | 210 |
| MS.gene25715.t1 | AT1G32950 | 37.666 | 377 | 212 | 11 | 3 | 367 | 397 | 762 | 1.96e-61 | 211 |
| MS.gene25715.t1 | AT5G59130 | 38.482 | 369 | 189 | 13 | 6 | 366 | 377 | 715 | 1.60e-60 | 207 |
| MS.gene25715.t1 | AT4G10530 | 35.556 | 360 | 199 | 10 | 16 | 367 | 402 | 736 | 4.78e-60 | 206 |
| MS.gene25715.t1 | AT1G32960 | 36.340 | 377 | 217 | 12 | 3 | 367 | 401 | 766 | 5.89e-60 | 206 |
| MS.gene25715.t1 | AT4G21326 | 39.039 | 333 | 188 | 7 | 39 | 367 | 367 | 688 | 1.76e-59 | 204 |
| MS.gene25715.t1 | AT4G15040 | 34.048 | 373 | 218 | 11 | 3 | 366 | 332 | 685 | 3.02e-52 | 184 |
| MS.gene25715.t1 | AT4G15040 | 34.048 | 373 | 218 | 11 | 3 | 366 | 332 | 685 | 3.02e-52 | 184 |
| MS.gene25715.t1 | AT5G67090 | 36.188 | 362 | 197 | 11 | 7 | 355 | 375 | 715 | 6.07e-51 | 181 |
| MS.gene25715.t1 | AT4G21323 | 34.959 | 369 | 220 | 9 | 10 | 367 | 435 | 794 | 8.50e-50 | 179 |
| MS.gene25715.t1 | AT4G30020 | 34.406 | 404 | 209 | 20 | 6 | 365 | 419 | 810 | 5.33e-46 | 168 |
| MS.gene25715.t1 | AT4G30020 | 34.406 | 404 | 209 | 20 | 6 | 365 | 419 | 810 | 5.33e-46 | 168 |
| MS.gene25715.t1 | AT4G30020 | 34.406 | 404 | 209 | 20 | 6 | 365 | 419 | 810 | 5.33e-46 | 168 |
| MS.gene25715.t1 | AT4G30020 | 34.406 | 404 | 209 | 20 | 6 | 365 | 419 | 810 | 5.33e-46 | 168 |
| MS.gene25715.t1 | AT1G32980 | 43.478 | 184 | 100 | 4 | 156 | 335 | 3 | 186 | 3.32e-43 | 149 |
| MS.gene25715.t1 | AT5G44530 | 31.204 | 407 | 225 | 15 | 6 | 368 | 440 | 835 | 1.15e-42 | 159 |
| MS.gene25715.t1 | AT2G19170 | 34.080 | 402 | 213 | 19 | 6 | 365 | 418 | 809 | 1.16e-42 | 159 |
| MS.gene25715.t1 | AT2G19170 | 34.080 | 402 | 213 | 19 | 6 | 365 | 418 | 809 | 1.16e-42 | 159 |
| MS.gene25715.t1 | AT1G30600 | 30.521 | 403 | 232 | 14 | 6 | 366 | 430 | 826 | 1.41e-42 | 158 |
| MS.gene25715.t1 | AT4G20430 | 30.424 | 401 | 232 | 13 | 6 | 366 | 455 | 848 | 3.79e-40 | 151 |
| MS.gene25715.t1 | AT4G20430 | 30.424 | 401 | 232 | 13 | 6 | 366 | 455 | 848 | 3.79e-40 | 151 |
| MS.gene25715.t1 | AT4G00230 | 40.722 | 194 | 106 | 4 | 3 | 194 | 385 | 571 | 1.25e-38 | 145 |
| MS.gene25715.t1 | AT4G20430 | 33.216 | 283 | 166 | 7 | 100 | 366 | 549 | 824 | 2.83e-38 | 146 |
| MS.gene25715.t1 | AT2G39850 | 34.663 | 326 | 163 | 17 | 75 | 369 | 462 | 768 | 3.29e-38 | 145 |
| MS.gene25715.t1 | AT5G44530 | 29.398 | 432 | 225 | 16 | 6 | 368 | 440 | 860 | 6.90e-38 | 145 |
| MS.gene25715.t1 | AT5G58840 | 44.371 | 151 | 82 | 2 | 42 | 192 | 384 | 532 | 1.05e-34 | 134 |
| MS.gene25715.t1 | AT1G62340 | 31.017 | 403 | 229 | 17 | 6 | 369 | 440 | 832 | 1.30e-34 | 135 |
| MS.gene25715.t1 | AT5G03620 | 38.776 | 196 | 104 | 3 | 6 | 192 | 388 | 576 | 7.23e-31 | 124 |
| MS.gene25715.t1 | AT5G59110 | 40.123 | 162 | 87 | 5 | 214 | 366 | 6 | 166 | 1.65e-25 | 101 |
| MS.gene25715.t1 | AT1G32940 | 37.379 | 206 | 111 | 7 | 3 | 200 | 398 | 593 | 4.35e-25 | 107 |
| MS.gene25715.t1 | AT1G20160 | 34.146 | 123 | 74 | 2 | 3 | 120 | 388 | 508 | 1.02e-13 | 72.8 |
Find 0 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCATTTCATAAATATTC+CGG | + | 24220:15600-15619 | MS.gene25715:intron | 15.0% |
| !!! | TTTTTGAACTTCAATATATT+TGG | - | 24220:17555-17574 | None:intergenic | 15.0% |
| !! | AATATATCATCAAAAGAAGT+TGG | - | 24220:15815-15834 | None:intergenic | 20.0% |
| !! | ATATTGAAGTTCAAAAATGT+TGG | + | 24220:17558-17577 | MS.gene25715:CDS | 20.0% |
| !! | GTAAAATTGAAAGTTAAGAA+AGG | + | 24220:17600-17619 | MS.gene25715:CDS | 20.0% |
| !!! | TACTGTAATTTTCTATCAAT+AGG | + | 24220:15849-15868 | MS.gene25715:intron | 20.0% |
| ! | AAATTCTTATGGCATTTGTA+AGG | - | 24220:17384-17403 | None:intergenic | 25.0% |
| ! | ACATAACAATAGATTACAAG+AGG | - | 24220:16607-16626 | None:intergenic | 25.0% |
| ! | ATTTCCACTATTGTTATCAT+TGG | - | 24220:16254-16273 | None:intergenic | 25.0% |
| ! | CAACAACAATATTTGTAAAC+CGG | - | 24220:15622-15641 | None:intergenic | 25.0% |
| ! | TAAATAGCTTTCACAACTAA+TGG | - | 24220:17693-17712 | None:intergenic | 25.0% |
| ! | TCAATTAGATCAAGTTACAT+TGG | - | 24220:16097-16116 | None:intergenic | 25.0% |
| ! | TCTAACATAAATTTCTCTGA+TGG | + | 24220:16307-16326 | MS.gene25715:CDS | 25.0% |
| ! | TGAGTAAGACAAATTGAATT+CGG | - | 24220:16748-16767 | None:intergenic | 25.0% |
| ! | TTGGTTAAATTCGCATTATA+CGG | - | 24220:17022-17041 | None:intergenic | 25.0% |
| !! | ATAATTGGGTAGAATTTTTG+TGG | - | 24220:15987-16006 | None:intergenic | 25.0% |
| !! | ATGCATTTTGTTAGAATTTC+TGG | + | 24220:15577-15596 | MS.gene25715:intron | 25.0% |
| !!! | CATCTGTTGCTTTAATAATT+GGG | - | 24220:16001-16020 | None:intergenic | 25.0% |
| !!! | TTAGTATGCAATTTTGTTGT+TGG | - | 24220:16484-16503 | None:intergenic | 25.0% |
| ACAAGGACATCAAAAAATGT+TGG | + | 24220:17468-17487 | MS.gene25715:CDS | 30.0% | |
| ACACAAAAGTTGAGATTTCT+TGG | - | 24220:16930-16949 | None:intergenic | 30.0% | |
| ACACTTAAAACTTGATCGTT+TGG | + | 24220:16420-16439 | MS.gene25715:intron | 30.0% | |
| ATGAAAATATTGCCATGATG+GGG | - | 24220:16513-16532 | None:intergenic | 30.0% | |
| ATTCAATTTGTCTTACTCAC+CGG | + | 24220:16749-16768 | MS.gene25715:CDS | 30.0% | |
| CACAAAAGTTGAGATTTCTT+GGG | - | 24220:16929-16948 | None:intergenic | 30.0% | |
| GAGAAATTTATGTTAGAAGC+AGG | - | 24220:16304-16323 | None:intergenic | 30.0% | |
| GATGAAAATATTGCCATGAT+GGG | - | 24220:16514-16533 | None:intergenic | 30.0% | |
| TAAAGCAACAGATGCTAAAT+TGG | + | 24220:16007-16026 | MS.gene25715:intron | 30.0% | |
| TGACTCTCAATTATCTTGTT+TGG | + | 24220:15923-15942 | MS.gene25715:intron | 30.0% | |
| TGAGGATACTGAAATTCTTA+TGG | - | 24220:17395-17414 | None:intergenic | 30.0% | |
| TTCAACTTCTTATGTGCATT+AGG | + | 24220:17321-17340 | MS.gene25715:CDS | 30.0% | |
| TTCACTAGTTATGTTCTTCT+TGG | + | 24220:15746-15765 | MS.gene25715:intron | 30.0% | |
| ! | ATCGTTTGGACTTAACTTTT+AGG | + | 24220:16434-16453 | MS.gene25715:intron | 30.0% |
| ! | ATCTTGTTTGGTTCAATCAA+CGG | + | 24220:15935-15954 | MS.gene25715:intron | 30.0% |
| ! | ATGGCAATATTTTCATCCAA+AGG | + | 24220:16517-16536 | MS.gene25715:CDS | 30.0% |
| ! | TGGCAATATTTTCATCCAAA+GGG | + | 24220:16518-16537 | MS.gene25715:CDS | 30.0% |
| !! | ATTAACACCTTTAGAATCTC+GGG | - | 24220:16559-16578 | None:intergenic | 30.0% |
| !! | GATTAACACCTTTAGAATCT+CGG | - | 24220:16560-16579 | None:intergenic | 30.0% |
| !! | GCATCTGTTGCTTTAATAAT+TGG | - | 24220:16002-16021 | None:intergenic | 30.0% |
| AAAATAGTAGTGTGCCTGAA+TGG | + | 24220:16172-16191 | MS.gene25715:CDS | 35.0% | |
| AAGGATACAAGGTTCTCAAA+AGG | - | 24220:16814-16833 | None:intergenic | 35.0% | |
| ACATGAACAATGTATGTTCC+TGG | - | 24220:17498-17517 | None:intergenic | 35.0% | |
| AGAAATCTAGCAGTCTAGTT+TGG | + | 24220:16366-16385 | MS.gene25715:intron | 35.0% | |
| AGACTGCTAGATTTCTTACT+TGG | - | 24220:16362-16381 | None:intergenic | 35.0% | |
| AGGTTGAGATGAATACTACA+CGG | - | 24220:17131-17150 | None:intergenic | 35.0% | |
| AGTTATGTTCTTCTTGGCAA+CGG | + | 24220:15752-15771 | MS.gene25715:intron | 35.0% | |
| ATAGCAGATTTAATAGCAGC+CGG | - | 24220:16845-16864 | None:intergenic | 35.0% | |
| CACTATTGTTATCATTGGCA+AGG | - | 24220:16249-16268 | None:intergenic | 35.0% | |
| CTGTGATTGAAGGATAGTTT+AGG | - | 24220:17419-17438 | None:intergenic | 35.0% | |
| CTTGCCAATGATAACAATAG+TGG | + | 24220:16247-16266 | MS.gene25715:CDS | 35.0% | |
| GCAACAAAGAGTTATGTGTT+TGG | + | 24220:17627-17646 | MS.gene25715:CDS | 35.0% | |
| GGATGAAAATATTGCCATGA+TGG | - | 24220:16515-16534 | None:intergenic | 35.0% | |
| GTTATGTCATAAACAAGTCC+AGG | - | 24220:17288-17307 | None:intergenic | 35.0% | |
| GTTGTAGCTGAAAATGATAG+AGG | - | 24220:17165-17184 | None:intergenic | 35.0% | |
| TCTCAATTCAGCACTTACAT+TGG | - | 24220:17041-17060 | None:intergenic | 35.0% | |
| TGAAAATATTGCCATGATGG+GGG | - | 24220:16512-16531 | None:intergenic | 35.0% | |
| TTGTCGATCTCTTCATTAGT+TGG | - | 24220:16722-16741 | None:intergenic | 35.0% | |
| TTTGATGCAGTAGCATCATT+TGG | - | 24220:15677-15696 | None:intergenic | 35.0% | |
| ! | AAAATGTTGGTGAAGAGAAG+AGG | + | 24220:17571-17590 | MS.gene25715:CDS | 35.0% |
| ! | AGATTTGGAACTGTGATTGA+AGG | - | 24220:17429-17448 | None:intergenic | 35.0% |
| ! | TCTTGTTTGGTTCAATCAAC+GGG | + | 24220:15936-15955 | MS.gene25715:intron | 35.0% |
| !! | TTGAAGGATAGTTTAGGTTG+AGG | - | 24220:17413-17432 | None:intergenic | 35.0% |
| AAATCTGCTATCATGACCAC+AGG | + | 24220:16854-16873 | MS.gene25715:CDS | 40.0% | |
| AGCTACAACATTAGACAACG+AGG | + | 24220:17176-17195 | MS.gene25715:intron | 40.0% | |
| ATCACAGTTCCAAATCTCTC+TGG | + | 24220:17432-17451 | MS.gene25715:CDS | 40.0% | |
| ATCTCGGGTACAATGGTATT+TGG | - | 24220:16544-16563 | None:intergenic | 40.0% | |
| CAAGAGTTTCTTCTTACCTG+TGG | - | 24220:16873-16892 | None:intergenic | 40.0% | |
| CAAGCAACACCATTTAGCTA+CGG | + | 24220:17228-17247 | MS.gene25715:CDS | 40.0% | |
| CACAGGTAAGAAGAAACTCT+TGG | + | 24220:16871-16890 | MS.gene25715:intron | 40.0% | |
| CATTGTACCCGAGATTCTAA+AGG | + | 24220:16549-16568 | MS.gene25715:CDS | 40.0% | |
| GGATGTGTAATATAAGCCAC+TGG | - | 24220:16463-16482 | None:intergenic | 40.0% | |
| GTGTAGTATTCATCTCAACC+TGG | + | 24220:17130-17149 | MS.gene25715:intron | 40.0% | |
| TACAATGGTATTTGGCCCTT+TGG | - | 24220:16536-16555 | None:intergenic | 40.0% | |
| TCGCATTATACGGAAGTTCA+AGG | - | 24220:17012-17031 | None:intergenic | 40.0% | |
| TGAGAACCTTGTATCCTTCT+TGG | + | 24220:16816-16835 | MS.gene25715:CDS | 40.0% | |
| TGATAGAGGACAATTAGACC+AGG | - | 24220:17151-17170 | None:intergenic | 40.0% | |
| TTAGAAGCAGGAAGAACATG+AGG | - | 24220:16292-16311 | None:intergenic | 40.0% | |
| TTCATGTTCAGAACCCAAGT+GGG | + | 24220:17511-17530 | MS.gene25715:CDS | 40.0% | |
| ! | ATGTGTTTGGTACGCTGATT+TGG | + | 24220:17640-17659 | MS.gene25715:CDS | 40.0% |
| ! | CTTGTTTGGTTCAATCAACG+GGG | + | 24220:15937-15956 | MS.gene25715:intron | 40.0% |
| ! | CTTTTGGTACCATCCAGAAT+TGG | - | 24220:17207-17226 | None:intergenic | 40.0% |
| ! | TCAAAAAATGTTGGTGCTCC+AGG | + | 24220:17477-17496 | MS.gene25715:CDS | 40.0% |
| ! | TTGTTTGGTTCAATCAACGG+GGG | + | 24220:15938-15957 | MS.gene25715:intron | 40.0% |
| !! | CTTAACTTTTAGGTCTCCAG+TGG | + | 24220:16444-16463 | MS.gene25715:intron | 40.0% |
| !! | CTTTAGAATCTCGGGTACAA+TGG | - | 24220:16551-16570 | None:intergenic | 40.0% |
| !!! | AAATGGTGTTGCTTGGCTTT+TGG | - | 24220:17223-17242 | None:intergenic | 40.0% |
| ACAGAAACAGTGATCCCACT+TGG | - | 24220:17528-17547 | None:intergenic | 45.0% | |
| ATAGTAGTGTGCCTGAATGG+AGG | + | 24220:16175-16194 | MS.gene25715:CDS | 45.0% | |
| CAGAAACAGTGATCCCACTT+GGG | - | 24220:17527-17546 | None:intergenic | 45.0% | |
| CCAAACAGTGCAATAGATCC+TGG | + | 24220:17267-17286 | MS.gene25715:CDS | 45.0% | |
| CCAGGATCTATTGCACTGTT+TGG | - | 24220:17270-17289 | None:intergenic | 45.0% | |
| CTGAATGGAGGAGTGGATAA+GGG | + | 24220:16187-16206 | MS.gene25715:CDS | 45.0% | |
| CTGCAATTCCCGAAATGTGA+GGG | - | 24220:16790-16809 | None:intergenic | 45.0% | |
| CTGGATCACAAGAAGGTGAA+GGG | + | 24220:16148-16167 | MS.gene25715:CDS | 45.0% | |
| CTGGATCAGTGACAGTTACA+AGG | + | 24220:17451-17470 | MS.gene25715:CDS | 45.0% | |
| CTTGTATCCTTCTTGGAGTC+CGG | + | 24220:16823-16842 | MS.gene25715:CDS | 45.0% | |
| GAACTCTCTATCCATTGTGC+TGG | - | 24220:15729-15748 | None:intergenic | 45.0% | |
| GCACCAACTGTGATATACCA+AGG | - | 24220:15707-15726 | None:intergenic | 45.0% | |
| GCTCCTTGGTATATCACAGT+TGG | + | 24220:15701-15720 | MS.gene25715:intron | 45.0% | |
| GGAGAACAAGCTCTTATAGC+TGG | + | 24220:16208-16227 | MS.gene25715:CDS | 45.0% | |
| GTCACTGATCCAGAGAGATT+TGG | - | 24220:17444-17463 | None:intergenic | 45.0% | |
| GTTCATGTTCAGAACCCAAG+TGG | + | 24220:17510-17529 | MS.gene25715:CDS | 45.0% | |
| TCTGGATCACAAGAAGGTGA+AGG | + | 24220:16147-16166 | MS.gene25715:CDS | 45.0% | |
| TGGCAACGGTTTAAGCTTCA+AGG | + | 24220:15766-15785 | MS.gene25715:intron | 45.0% | |
| ! | CTGCATCAAATCTAGCTCCT+TGG | + | 24220:15687-15706 | MS.gene25715:intron | 45.0% |
| ! | TCTAGCAGTCTAGTTTGGTG+TGG | + | 24220:16371-16390 | MS.gene25715:intron | 45.0% |
| !! | CGTAGCTAAATGGTGTTGCT+TGG | - | 24220:17230-17249 | None:intergenic | 45.0% |
| !! | GTACGCTGATTTGGTCAGAT+GGG | + | 24220:17649-17668 | MS.gene25715:CDS | 45.0% |
| ACACCATTTAGCTACGGAGC+AGG | + | 24220:17234-17253 | MS.gene25715:CDS | 50.0% | |
| ATGTCGAGCCCTCACATTTC+GGG | + | 24220:16779-16798 | MS.gene25715:CDS | 50.0% | |
| CATGTCGAGCCCTCACATTT+CGG | + | 24220:16778-16797 | MS.gene25715:CDS | 50.0% | |
| CCTCACATTTCGGGAATTGC+AGG | + | 24220:16788-16807 | MS.gene25715:CDS | 50.0% | |
| CCTGAATGGAGGAGTGGATA+AGG | + | 24220:16186-16205 | MS.gene25715:CDS | 50.0% | |
| CCTGCAATTCCCGAAATGTG+AGG | - | 24220:16791-16810 | None:intergenic | 50.0% | |
| CCTTATCCACTCCTCCATTC+AGG | - | 24220:16189-16208 | None:intergenic | 50.0% | |
| CGGACTCCAAGAAGGATACA+AGG | - | 24220:16825-16844 | None:intergenic | 50.0% | |
| GCAGCAAGCTTTGCCAGAAT+GGG | + | 24220:16122-16141 | MS.gene25715:intron | 50.0% | |
| TACTAAACCAGCCCCCATCA+TGG | + | 24220:16498-16517 | MS.gene25715:CDS | 50.0% | |
| TATCACAGCACCAGGTGTGT+CGG | + | 24220:16667-16686 | MS.gene25715:CDS | 50.0% | |
| TGCAGCAAGCTTTGCCAGAA+TGG | + | 24220:16121-16140 | MS.gene25715:intron | 50.0% | |
| TGGCTCTTCAGCTTCAGTGA+AGG | - | 24220:16702-16721 | None:intergenic | 50.0% | |
| TGGGACTCTGGATCACAAGA+AGG | + | 24220:16141-16160 | MS.gene25715:CDS | 50.0% | |
| TGTCCTGCTCCGTAGCTAAA+TGG | - | 24220:17240-17259 | None:intergenic | 50.0% | |
| TGTGATCCAGAGTCCCATTC+TGG | - | 24220:16138-16157 | None:intergenic | 50.0% | |
| ! | AATATTGCCATGATGGGGGC+TGG | - | 24220:16508-16527 | None:intergenic | 50.0% |
| ! | GTTGTTGTTGCTTGCTCTGC+TGG | + | 24220:15641-15660 | MS.gene25715:intron | 50.0% |
| !! | ACACCTGGTGCTGTGATATC+AGG | - | 24220:16665-16684 | None:intergenic | 50.0% |
| !! | GCTCTTATAGCTGGTGCTGT+AGG | + | 24220:16217-16236 | MS.gene25715:CDS | 50.0% |
| !! | GGTACGCTGATTTGGTCAGA+TGG | + | 24220:17648-17667 | MS.gene25715:CDS | 50.0% |
| !! | TATAGCTGGTGCTGTAGGAG+TGG | + | 24220:16222-16241 | MS.gene25715:CDS | 50.0% |
| AGTGTGCCTGAATGGAGGAG+TGG | + | 24220:16180-16199 | MS.gene25715:CDS | 55.0% | |
| ATAGCAGCCGGACTCCAAGA+AGG | - | 24220:16833-16852 | None:intergenic | 55.0% | |
| CAACGAGGCAGAGCCAATTC+TGG | + | 24220:17191-17210 | MS.gene25715:CDS | 55.0% | |
| CAGCCTGATATCACAGCACC+AGG | + | 24220:16659-16678 | MS.gene25715:intron | 55.0% | |
| CGAAATGTGAGGGCTCGACA+TGG | - | 24220:16780-16799 | None:intergenic | 55.0% | |
| GAGGCAGAGCCAATTCTGGA+TGG | + | 24220:17195-17214 | MS.gene25715:CDS | 55.0% | |
| GCTGCTATAACCGACACACC+TGG | - | 24220:16680-16699 | None:intergenic | 55.0% | |
| GCTTGCTCTGCTGGCAATGA+TGG | + | 24220:15650-15669 | MS.gene25715:intron | 55.0% | |
| GCTTTGCCAGAATGGGACTC+TGG | + | 24220:16129-16148 | MS.gene25715:CDS | 55.0% | |
| !! | CACAGTTGGTGCCAGCACAA+TGG | + | 24220:15715-15734 | MS.gene25715:intron | 55.0% |
| AGGGCTCGACATGGATGTGC+CGG | - | 24220:16771-16790 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 24220 | gene | 15547 | 17713 | 15547 | ID=MS.gene25715 |
| 24220 | mRNA | 15547 | 17713 | 15547 | ID=MS.gene25715.t1;Parent=MS.gene25715 |
| 24220 | exon | 15547 | 15554 | 15547 | ID=MS.gene25715.t1.exon1;Parent=MS.gene25715.t1 |
| 24220 | CDS | 15547 | 15554 | 15547 | ID=cds.MS.gene25715.t1;Parent=MS.gene25715.t1 |
| 24220 | exon | 16126 | 16362 | 16126 | ID=MS.gene25715.t1.exon2;Parent=MS.gene25715.t1 |
| 24220 | CDS | 16126 | 16362 | 16126 | ID=cds.MS.gene25715.t1;Parent=MS.gene25715.t1 |
| 24220 | exon | 16456 | 16570 | 16456 | ID=MS.gene25715.t1.exon3;Parent=MS.gene25715.t1 |
| 24220 | CDS | 16456 | 16570 | 16456 | ID=cds.MS.gene25715.t1;Parent=MS.gene25715.t1 |
| 24220 | exon | 16662 | 16875 | 16662 | ID=MS.gene25715.t1.exon4;Parent=MS.gene25715.t1 |
| 24220 | CDS | 16662 | 16875 | 16662 | ID=cds.MS.gene25715.t1;Parent=MS.gene25715.t1 |
| 24220 | exon | 17178 | 17713 | 17178 | ID=MS.gene25715.t1.exon5;Parent=MS.gene25715.t1 |
| 24220 | CDS | 17178 | 17713 | 17178 | ID=cds.MS.gene25715.t1;Parent=MS.gene25715.t1 |
| Gene Sequence |
| Protein sequence |
