Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31652.t1 | XP_024630954.1 | 82.1 | 369 | 17 | 3 | 1 | 320 | 125 | 493 | 2.40E-161 | 578.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31652.t1 | A0A396JEN7 | 82.1 | 369 | 17 | 3 | 1 | 320 | 125 | 493 | 1.7e-161 | 578.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene31652 | 0.820268 | 7.50E-53 | -1.69E-46 |
| MS.gene049159 | MS.gene31652 | 0.861693 | 8.58E-64 | -1.69E-46 |
| MS.gene049404 | MS.gene31652 | 0.845772 | 3.30E-59 | -1.69E-46 |
| MS.gene049435 | MS.gene31652 | 0.849851 | 2.48E-60 | -1.69E-46 |
| MS.gene049501 | MS.gene31652 | 0.848942 | 4.44E-60 | -1.69E-46 |
| MS.gene049850 | MS.gene31652 | 0.825531 | 4.46E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene31652 | 0.83801 | 3.71E-57 | -1.69E-46 |
| MS.gene050719 | MS.gene31652 | 0.806673 | 7.34E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene31652 | 0.803102 | 4.09E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene31652 | 0.809512 | 1.82E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene31652 | 0.843362 | 1.47E-58 | -1.69E-46 |
| MS.gene051247 | MS.gene31652 | 0.834207 | 3.42E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene31652 | 0.812098 | 5.03E-51 | -1.69E-46 |
| MS.gene051388 | MS.gene31652 | 0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene31652 | 0.810328 | 1.22E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene31652 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene31652 | 0.804981 | 1.66E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene31652 | 0.802499 | 5.45E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene31652 | 0.844153 | 9.02E-59 | -1.69E-46 |
| MS.gene051800 | MS.gene31652 | 0.833283 | 5.83E-56 | -1.69E-46 |
| MS.gene052020 | MS.gene31652 | 0.856127 | 3.97E-62 | -1.69E-46 |
| MS.gene05215 | MS.gene31652 | 0.805408 | 1.35E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene31652 | 0.818344 | 2.06E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene31652 | 0.831689 | 1.45E-55 | -1.69E-46 |
| MS.gene052582 | MS.gene31652 | 0.807378 | 5.21E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene31652 | 0.800406 | 1.46E-48 | -1.69E-46 |
| MS.gene052611 | MS.gene31652 | 0.842112 | 3.15E-58 | -1.69E-46 |
| MS.gene052612 | MS.gene31652 | 0.824293 | 8.73E-54 | -1.69E-46 |
| MS.gene052665 | MS.gene31652 | 0.801771 | 7.69E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene31652 | 0.817275 | 3.59E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene31652 | 0.819731 | 9.96E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene31652 | 0.833714 | 4.55E-56 | -1.69E-46 |
| MS.gene053079 | MS.gene31652 | 0.804758 | 1.85E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene31652 | 0.835468 | 1.65E-56 | -1.69E-46 |
| MS.gene053565 | MS.gene31652 | 0.812125 | 4.96E-51 | -1.69E-46 |
| MS.gene053621 | MS.gene31652 | 0.809151 | 2.18E-50 | -1.69E-46 |
| MS.gene053998 | MS.gene31652 | 0.801592 | 8.37E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene31652 | 0.813741 | 2.20E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene31652 | 0.806498 | 7.99E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene31652 | 0.835382 | 1.73E-56 | -1.69E-46 |
| MS.gene054467 | MS.gene31652 | 0.813214 | 2.87E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene31652 | 0.805127 | 1.55E-49 | -1.69E-46 |
| MS.gene05447 | MS.gene31652 | 0.807471 | 4.97E-50 | -1.69E-46 |
| MS.gene05462 | MS.gene31652 | 0.800056 | 1.72E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene31652 | 0.835036 | 2.12E-56 | -1.69E-46 |
| MS.gene05468 | MS.gene31652 | 0.800493 | 1.40E-48 | -1.69E-46 |
| MS.gene054775 | MS.gene31652 | 0.81798 | 2.49E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene31652 | 0.804989 | 1.66E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene31652 | 0.804403 | 2.20E-49 | -1.69E-46 |
| MS.gene055228 | MS.gene31652 | 0.800893 | 1.16E-48 | -1.69E-46 |
| MS.gene055357 | MS.gene31652 | 0.803849 | 2.86E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene31652 | 0.82041 | 6.96E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene31652 | 0.828507 | 8.65E-55 | -1.69E-46 |
| MS.gene055468 | MS.gene31652 | 0.800837 | 1.19E-48 | -1.69E-46 |
| MS.gene055608 | MS.gene31652 | 0.80812 | 3.62E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene31652 | 0.805538 | 1.27E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene31652 | 0.82656 | 2.54E-54 | -1.69E-46 |
| MS.gene055890 | MS.gene31652 | 0.812847 | 3.45E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene31652 | 0.820477 | 6.72E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene31652 | 0.803834 | 2.89E-49 | -1.69E-46 |
| MS.gene056162 | MS.gene31652 | 0.803265 | 3.79E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene31652 | 0.82819 | 1.03E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene31652 | 0.832904 | 7.24E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene31652 | 0.83722 | 5.91E-57 | -1.69E-46 |
| MS.gene056553 | MS.gene31652 | 0.843016 | 1.82E-58 | -1.69E-46 |
| MS.gene056595 | MS.gene31652 | 0.800357 | 1.50E-48 | -1.69E-46 |
| MS.gene057314 | MS.gene31652 | 0.812244 | 4.67E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene31652 | 0.812509 | 4.09E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene31652 | 0.808623 | 2.83E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene31652 | 0.870181 | 1.77E-66 | -1.69E-46 |
| MS.gene057915 | MS.gene31652 | 0.852904 | 3.40E-61 | -1.69E-46 |
| MS.gene058010 | MS.gene31652 | 0.844844 | 5.88E-59 | -1.69E-46 |
| MS.gene058037 | MS.gene31652 | 0.800606 | 1.33E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene31652 | 0.809925 | 1.49E-50 | -1.69E-46 |
| MS.gene058829 | MS.gene31652 | 0.820672 | 6.06E-53 | -1.69E-46 |
| MS.gene058919 | MS.gene31652 | 0.809381 | 1.95E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene31652 | 0.833381 | 5.51E-56 | -1.69E-46 |
| MS.gene059015 | MS.gene31652 | 0.811818 | 5.79E-51 | -1.69E-46 |
| MS.gene059570 | MS.gene31652 | 0.823352 | 1.45E-53 | -1.69E-46 |
| MS.gene059625 | MS.gene31652 | 0.803553 | 3.30E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene31652 | 0.807828 | 4.18E-50 | -1.69E-46 |
| MS.gene05973 | MS.gene31652 | 0.800343 | 1.51E-48 | -1.69E-46 |
| MS.gene059842 | MS.gene31652 | 0.800037 | 1.74E-48 | -1.69E-46 |
| MS.gene059937 | MS.gene31652 | 0.804826 | 1.79E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene31652 | 0.819127 | 1.37E-52 | -1.69E-46 |
| MS.gene060137 | MS.gene31652 | -0.810955 | 8.91E-51 | -1.69E-46 |
| MS.gene060167 | MS.gene31652 | 0.821955 | 3.07E-53 | -1.69E-46 |
| MS.gene060312 | MS.gene31652 | 0.818832 | 1.60E-52 | -1.69E-46 |
| MS.gene060322 | MS.gene31652 | 0.813583 | 2.38E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene31652 | 0.824428 | 8.12E-54 | -1.69E-46 |
| MS.gene060587 | MS.gene31652 | 0.819856 | 9.32E-53 | -1.69E-46 |
| MS.gene060781 | MS.gene31652 | 0.807832 | 4.17E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene31652 | 0.803165 | 3.97E-49 | -1.69E-46 |
| MS.gene060918 | MS.gene31652 | 0.828187 | 1.03E-54 | -1.69E-46 |
| MS.gene060998 | MS.gene31652 | 0.830517 | 2.81E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31652.t1 | AT5G24340 | 53.678 | 367 | 119 | 6 | 1 | 320 | 124 | 486 | 7.65e-116 | 344 |
| MS.gene31652.t1 | AT5G24340 | 53.678 | 367 | 119 | 6 | 1 | 320 | 124 | 486 | 1.46e-115 | 343 |
Find 54 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGAATATTTAAGGTCTTTC+AGG | 0.172278 | 1.1:+11897405 | MS.gene31652:CDS |
| TTGCTTGCTCGGAATATTTA+AGG | 0.172649 | 1.1:+11897396 | MS.gene31652:CDS |
| TGGACTGTCACCAACTTTAT+TGG | 0.183295 | 1.1:+11899923 | MS.gene31652:CDS |
| TGGACAGGTTGAACCGTATT+TGG | 0.193079 | 1.1:+11895382 | None:intergenic |
| TCTTGTTAAAATAAGCAATT+TGG | 0.207919 | 1.1:-11899879 | None:intergenic |
| AAGAAGCAGTTGCCAATTAA+TGG | 0.266519 | 1.1:+11898570 | MS.gene31652:CDS |
| GTTGGGGATTTCACTATCTA+AGG | 0.266528 | 1.1:+11895499 | MS.gene31652:CDS |
| TCTCTGGGAAGCCCATTAAT+TGG | 0.275370 | 1.1:-11898582 | None:intergenic |
| TTAACAAGAATTTAGAGTTT+TGG | 0.282841 | 1.1:+11899893 | MS.gene31652:CDS |
| TTGGGTTGAAAGAGCTATTC+AGG | 0.285803 | 1.1:+11898304 | MS.gene31652:CDS |
| TTCTTGTTCTGATGTTGTTC+AGG | 0.290742 | 1.1:+11898395 | MS.gene31652:CDS |
| GGACTGTCACCAACTTTATT+GGG | 0.348017 | 1.1:+11899924 | MS.gene31652:CDS |
| GATCTTCGTTAATATTTAGT+TGG | 0.370178 | 1.1:-11899759 | None:intergenic |
| ATCCTTCGAAGTGCAAATCT+TGG | 0.374118 | 1.1:+11898285 | MS.gene31652:CDS |
| ACCATTTGTGGAGAATTGTT+GGG | 0.393604 | 1.1:+11895482 | MS.gene31652:CDS |
| AGAAGCAGTTGCCAATTAAT+GGG | 0.394347 | 1.1:+11898571 | MS.gene31652:CDS |
| CAAAACATTTACGTTGTGTT+GGG | 0.402928 | 1.1:+11899033 | MS.gene31652:CDS |
| TTGTCAGAAAACATGGTGAT+AGG | 0.426512 | 1.1:+11898496 | MS.gene31652:CDS |
| ATACTCTATTACCTTGGTTC+AGG | 0.430519 | 1.1:-11899086 | None:intergenic |
| AAGAGTTTGTCAACCATTTG+TGG | 0.436956 | 1.1:+11895470 | MS.gene31652:CDS |
| CCATAGCTGCATATGTCATC+TGG | 0.441623 | 1.1:-11897366 | None:intergenic |
| TCCTTCGAAGTGCAAATCTT+GGG | 0.443609 | 1.1:+11898286 | MS.gene31652:CDS |
| GGTTCAGGCTTCTTTGAAGA+AGG | 0.443658 | 1.1:-11899071 | None:intergenic |
| AGGAGCTCCAATGTAGTGAT+TGG | 0.446279 | 1.1:+11897320 | MS.gene31652:intron |
| CCCCAACAATTCTCCACAAA+TGG | 0.450171 | 1.1:-11895483 | None:intergenic |
| GTCATCTGGTCTTCTGTAAG+AGG | 0.455188 | 1.1:-11897352 | None:intergenic |
| AACCATTTGTGGAGAATTGT+TGG | 0.467719 | 1.1:+11895481 | MS.gene31652:CDS |
| GCAAAACATTTACGTTGTGT+TGG | 0.472670 | 1.1:+11899032 | MS.gene31652:CDS |
| GTTCAGGTGATACCTTCAGC+AGG | 0.480716 | 1.1:+11898411 | MS.gene31652:CDS |
| ATGGATGCTCATTGCTTGCT+CGG | 0.498298 | 1.1:+11897385 | MS.gene31652:CDS |
| ACAATACCTCCCAATAAAGT+TGG | 0.500595 | 1.1:-11899933 | None:intergenic |
| CCAGATGACATATGCAGCTA+TGG | 0.508239 | 1.1:+11897366 | MS.gene31652:CDS |
| ATAGCCTCTTCAGTTGAAAG+TGG | 0.510202 | 1.1:-11899829 | None:intergenic |
| TGAATCACTGCCCCTGCTGA+AGG | 0.517305 | 1.1:-11898423 | None:intergenic |
| CCATTTGTGGAGAATTGTTG+GGG | 0.523216 | 1.1:+11895483 | MS.gene31652:CDS |
| ACCCAAGATTTGCACTTCGA+AGG | 0.527891 | 1.1:-11898287 | None:intergenic |
| ATTTAAGGTCTTTCAGGCAA+CGG | 0.532461 | 1.1:+11897411 | MS.gene31652:CDS |
| GAGGCTATTGAAGCTGCAAA+GGG | 0.542175 | 1.1:+11899844 | MS.gene31652:CDS |
| AGAGGCTATTGAAGCTGCAA+AGG | 0.553698 | 1.1:+11899843 | MS.gene31652:CDS |
| GAAGCCACTTTCAACTGAAG+AGG | 0.554381 | 1.1:+11899825 | MS.gene31652:CDS |
| TGATTCAAAAGTCATCATGT+AGG | 0.563710 | 1.1:+11898439 | MS.gene31652:CDS |
| TTGAAAATTGTCAGAAAACA+TGG | 0.565414 | 1.1:+11898489 | MS.gene31652:CDS |
| GATTCAAAAGTCATCATGTA+GGG | 0.569974 | 1.1:+11898440 | MS.gene31652:CDS |
| TCAAGATGCACAAAATGCAA+TGG | 0.575984 | 1.1:+11899790 | MS.gene31652:CDS |
| ACACTCGTAATATCCAAATA+CGG | 0.580297 | 1.1:-11895395 | None:intergenic |
| ATTTAGAGAACTTTGATGAG+TGG | 0.582031 | 1.1:+11898610 | MS.gene31652:CDS |
| ATGTAGGGATACTAAGCCAA+TGG | 0.584459 | 1.1:+11898455 | MS.gene31652:CDS |
| GAGAACTTTGATGAGTGGCA+AGG | 0.591373 | 1.1:+11898615 | MS.gene31652:CDS |
| TTCAGGTGATACCTTCAGCA+GGG | 0.596087 | 1.1:+11898412 | MS.gene31652:CDS |
| CTGTCACCAACTTTATTGGG+AGG | 0.600563 | 1.1:+11899927 | MS.gene31652:CDS |
| GTTGTGACCAATCACTACAT+TGG | 0.602180 | 1.1:-11897327 | None:intergenic |
| GATGCACAAAATGCAATGGA+AGG | 0.607518 | 1.1:+11899794 | MS.gene31652:CDS |
| TCAGGTGATACCTTCAGCAG+GGG | 0.648948 | 1.1:+11898413 | MS.gene31652:CDS |
| CTTCAAAGAAGCCTGAACCA+AGG | 0.685428 | 1.1:+11899075 | MS.gene31652:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAAAAACTAGTTT+TGG | + | chr1.1:11895901-11895920 | MS.gene31652:intron | 10.0% |
| !! | AAAAAAACATAAATGTTCTT+TGG | - | chr1.1:11896799-11896818 | None:intergenic | 15.0% |
| !! | ACATGAATAAAATAATTGTA+AGG | - | chr1.1:11896555-11896574 | None:intergenic | 15.0% |
| !! | ATTCTGTAACTAATAATATT+TGG | - | chr1.1:11897066-11897085 | None:intergenic | 15.0% |
| !! | TATGTTTATTGAGTTTAAAA+AGG | + | chr1.1:11897088-11897107 | MS.gene31652:intron | 15.0% |
| !! | TTATACTTAGATTAGTATAA+AGG | + | chr1.1:11899612-11899631 | MS.gene31652:intron | 15.0% |
| !!! | ATAATACTTTTCTAAATCAA+AGG | - | chr1.1:11895938-11895957 | None:intergenic | 15.0% |
| !! | AAGAATATTTAAGCTTTACA+TGG | - | chr1.1:11896491-11896510 | None:intergenic | 20.0% |
| !! | AGTCAAATTAATATTTAACC+TGG | + | chr1.1:11899558-11899577 | MS.gene31652:intron | 20.0% |
| !! | ATATTTATTGAAATGCGTTA+TGG | + | chr1.1:11898905-11898924 | MS.gene31652:intron | 20.0% |
| !! | ATGTATATAATAGGACATAA+GGG | + | chr1.1:11897183-11897202 | MS.gene31652:intron | 20.0% |
| !! | CTAGTTTCTATCTTAAAAAA+AGG | - | chr1.1:11895977-11895996 | None:intergenic | 20.0% |
| !! | TAAGTTCATTATTATTTGTG+TGG | + | chr1.1:11899147-11899166 | MS.gene31652:intron | 20.0% |
| !! | TAGTATAACATTATCTTTCA+AGG | + | chr1.1:11899438-11899457 | MS.gene31652:intron | 20.0% |
| !! | TCTTGTTAAAATAAGCAATT+TGG | - | chr1.1:11899882-11899901 | None:intergenic | 20.0% |
| !! | TGAGTTTAAAAAGGAATAAT+AGG | + | chr1.1:11897097-11897116 | MS.gene31652:intron | 20.0% |
| !! | TTTAAAAAATGCAAACTGAA+AGG | - | chr1.1:11897908-11897927 | None:intergenic | 20.0% |
| !!! | AATTTGACTTAAAAAATCCA+TGG | - | chr1.1:11899547-11899566 | None:intergenic | 20.0% |
| !!! | CGAATTAATTTTAAACTAGA+GGG | - | chr1.1:11897565-11897584 | None:intergenic | 20.0% |
| !!! | GTATAGAATGTTAATTTTCA+TGG | + | chr1.1:11899476-11899495 | MS.gene31652:intron | 20.0% |
| !!! | TATATGGCTTATTTTATAAC+TGG | + | chr1.1:11897705-11897724 | MS.gene31652:intron | 20.0% |
| !!! | TCGTTTGTTAAAATAAATAG+TGG | + | chr1.1:11897931-11897950 | MS.gene31652:intron | 20.0% |
| !!! | TTAACAAGAATTTAGAGTTT+TGG | + | chr1.1:11899893-11899912 | MS.gene31652:CDS | 20.0% |
| !!! | TTTTTTTGTCTTTCTTGATA+TGG | - | chr1.1:11897770-11897789 | None:intergenic | 20.0% |
| ! | AAATTTCATTCCTAAGTAGA+TGG | + | chr1.1:11896723-11896742 | MS.gene31652:intron | 25.0% |
| ! | AATAATACTGTAGGATACAA+AGG | - | chr1.1:11895873-11895892 | None:intergenic | 25.0% |
| ! | AATTTCTTCAGAAGAGTTTA+TGG | - | chr1.1:11897667-11897686 | None:intergenic | 25.0% |
| ! | ACCCAAAAAATTGAATTGAA+TGG | - | chr1.1:11895546-11895565 | None:intergenic | 25.0% |
| ! | AGAAACAGGATGTATATAAT+AGG | + | chr1.1:11897174-11897193 | MS.gene31652:intron | 25.0% |
| ! | AGGAACACTAGAAAATATAT+CGG | - | chr1.1:11895853-11895872 | None:intergenic | 25.0% |
| ! | ATAAAATGTGAGTATGAATC+TGG | + | chr1.1:11898981-11899000 | MS.gene31652:intron | 25.0% |
| ! | ATGTGAAAAGTAAGATCATA+TGG | - | chr1.1:11898152-11898171 | None:intergenic | 25.0% |
| ! | CAAAATACATAAATATTGCC+AGG | + | chr1.1:11896423-11896442 | MS.gene31652:intron | 25.0% |
| ! | CAGTTTATGTTAATAGAAAC+AGG | + | chr1.1:11897160-11897179 | MS.gene31652:intron | 25.0% |
| ! | CATCTTCAGTTTAAGAAAAA+TGG | + | chr1.1:11895425-11895444 | MS.gene31652:CDS | 25.0% |
| ! | CTATCTTAAAAAAAGGAGTT+CGG | - | chr1.1:11895970-11895989 | None:intergenic | 25.0% |
| ! | GATCTTCGTTAATATTTAGT+TGG | - | chr1.1:11899762-11899781 | None:intergenic | 25.0% |
| ! | GATGTATATAATAGGACATA+AGG | + | chr1.1:11897182-11897201 | MS.gene31652:intron | 25.0% |
| ! | GTTCATAAAAATTGAAGAGA+GGG | - | chr1.1:11898737-11898756 | None:intergenic | 25.0% |
| ! | TACACAGAATTTCTTGTAAT+TGG | + | chr1.1:11898212-11898231 | MS.gene31652:intron | 25.0% |
| ! | TAGTCAACTTACAAAAGATT+AGG | - | chr1.1:11896886-11896905 | None:intergenic | 25.0% |
| ! | TATTCTATATCCATTCACTA+AGG | + | chr1.1:11898184-11898203 | MS.gene31652:intron | 25.0% |
| ! | TCAATTTCTCAAGCAATATA+TGG | - | chr1.1:11899689-11899708 | None:intergenic | 25.0% |
| ! | TGTATATAATAGGACATAAG+GGG | + | chr1.1:11897184-11897203 | MS.gene31652:intron | 25.0% |
| ! | TTCAACAAAAATTCATCCAT+TGG | - | chr1.1:11898474-11898493 | None:intergenic | 25.0% |
| ! | TTCAGTTTAAGAAAAATGGA+AGG | + | chr1.1:11895429-11895448 | MS.gene31652:CDS | 25.0% |
| ! | TTGAAAATTGTCAGAAAACA+TGG | + | chr1.1:11898489-11898508 | MS.gene31652:CDS | 25.0% |
| ! | TTTGTCGAAAATAATACTGT+AGG | - | chr1.1:11895882-11895901 | None:intergenic | 25.0% |
| !! | ATTTGTTAACTTAAACTTCC+AGG | - | chr1.1:11896160-11896179 | None:intergenic | 25.0% |
| !! | CTGGCAATATTTATGTATTT+TGG | - | chr1.1:11896425-11896444 | None:intergenic | 25.0% |
| !! | GCGAATTAATTTTAAACTAG+AGG | - | chr1.1:11897566-11897585 | None:intergenic | 25.0% |
| !! | TTCTCTAAATGTTTTTCTCT+GGG | - | chr1.1:11898600-11898619 | None:intergenic | 25.0% |
| !!! | AAAACAAGATGTTAGCTTTT+TGG | - | chr1.1:11896057-11896076 | None:intergenic | 25.0% |
| !!! | AGCCATTCAATTCAATTTTT+TGG | + | chr1.1:11895541-11895560 | MS.gene31652:intron | 25.0% |
| !!! | CACAATTAGAAGTTAGTTTT+CGG | + | chr1.1:11895682-11895701 | MS.gene31652:intron | 25.0% |
| !!! | GCCATTCAATTCAATTTTTT+GGG | + | chr1.1:11895542-11895561 | MS.gene31652:intron | 25.0% |
| !!! | TCAGCATTCATTTTTCAAAT+GGG | + | chr1.1:11897615-11897634 | MS.gene31652:intron | 25.0% |
| AAAATTATTTGTGCCATCCT+TGG | + | chr1.1:11897787-11897806 | MS.gene31652:intron | 30.0% | |
| AAACAACAATTACCTCAAGT+AGG | - | chr1.1:11899341-11899360 | None:intergenic | 30.0% | |
| ACACTCGTAATATCCAAATA+CGG | - | chr1.1:11895398-11895417 | None:intergenic | 30.0% | |
| ACATGCTTTCTCAAATTTGT+TGG | + | chr1.1:11896978-11896997 | MS.gene31652:intron | 30.0% | |
| AGTTAAATTCCAATCACTCT+GGG | + | chr1.1:11898815-11898834 | MS.gene31652:intron | 30.0% | |
| ATGTCAGACATCAATATACA+CGG | + | chr1.1:11896571-11896590 | MS.gene31652:intron | 30.0% | |
| ATTGAAATGCGTTATGGAAA+AGG | + | chr1.1:11898911-11898930 | MS.gene31652:intron | 30.0% | |
| ATTTAGAGAACTTTGATGAG+TGG | + | chr1.1:11898610-11898629 | MS.gene31652:CDS | 30.0% | |
| CAAAACATTTACGTTGTGTT+GGG | + | chr1.1:11899033-11899052 | MS.gene31652:CDS | 30.0% | |
| CCACATAGACTCTATTATAT+AGG | + | chr1.1:11896337-11896356 | MS.gene31652:intron | 30.0% | |
| CCTATATAATAGAGTCTATG+TGG | - | chr1.1:11896340-11896359 | None:intergenic | 30.0% | |
| CGTTCATAAAAATTGAAGAG+AGG | - | chr1.1:11898738-11898757 | None:intergenic | 30.0% | |
| CTTTCAGTAAAAACCTTCTT+CGG | - | chr1.1:11897440-11897459 | None:intergenic | 30.0% | |
| GACTGAATTATGTTTGCTTT+AGG | + | chr1.1:11897300-11897319 | MS.gene31652:intron | 30.0% | |
| GATGATGCAGAAAAGATATA+TGG | + | chr1.1:11897689-11897708 | MS.gene31652:intron | 30.0% | |
| GATTCAAAAGTCATCATGTA+GGG | + | chr1.1:11898440-11898459 | MS.gene31652:CDS | 30.0% | |
| GCAAAGTGAAACTATTAATC+AGG | - | chr1.1:11897833-11897852 | None:intergenic | 30.0% | |
| GTCATAAACGTAGATATGTT+TGG | + | chr1.1:11895998-11896017 | MS.gene31652:intron | 30.0% | |
| GTTGGAAAGTTTCAATAATC+TGG | - | chr1.1:11899744-11899763 | None:intergenic | 30.0% | |
| TAGTAACTGAAAATGCTAGT+TGG | - | chr1.1:11897272-11897291 | None:intergenic | 30.0% | |
| TAGTTAAATTCCAATCACTC+TGG | + | chr1.1:11898814-11898833 | MS.gene31652:intron | 30.0% | |
| TATACCCTTTCGTTAATCTT+TGG | + | chr1.1:11898763-11898782 | MS.gene31652:intron | 30.0% | |
| TATCTTTCAAGGAACTCTTA+TGG | + | chr1.1:11899449-11899468 | MS.gene31652:intron | 30.0% | |
| TGATTCAAAAGTCATCATGT+AGG | + | chr1.1:11898439-11898458 | MS.gene31652:CDS | 30.0% | |
| TTAGGAATGAAATTTGCACA+AGG | - | chr1.1:11896718-11896737 | None:intergenic | 30.0% | |
| TTGCTGTATTAAATGTAGTC+AGG | + | chr1.1:11895810-11895829 | MS.gene31652:intron | 30.0% | |
| TTTATTAAATTCTACGCTGC+AGG | + | chr1.1:11898237-11898256 | MS.gene31652:intron | 30.0% | |
| TTTGTTGAATCCATCTACTT+AGG | - | chr1.1:11896736-11896755 | None:intergenic | 30.0% | |
| ! | ATATACACGGTGTCAAAATT+AGG | + | chr1.1:11896584-11896603 | MS.gene31652:intron | 30.0% |
| ! | GGGAGCATATAATATATGAT+CGG | + | chr1.1:11898835-11898854 | MS.gene31652:intron | 30.0% |
| ! | GTTCTCTAAATGTTTTTCTC+TGG | - | chr1.1:11898601-11898620 | None:intergenic | 30.0% |
| !! | ATTAGGTGCTTTATTTCTGT+AGG | + | chr1.1:11896601-11896620 | MS.gene31652:intron | 30.0% |
| !! | GTCAGCATTCATTTTTCAAA+TGG | + | chr1.1:11897614-11897633 | MS.gene31652:intron | 30.0% |
| !! | TTTAGAGTTTTGGCAATGTA+TGG | + | chr1.1:11899903-11899922 | MS.gene31652:CDS | 30.0% |
| !!! | AAAACTAGTTTTGGAAGCTA+AGG | + | chr1.1:11895910-11895929 | MS.gene31652:intron | 30.0% |
| !!! | AAACTAGTTTTGGAAGCTAA+GGG | + | chr1.1:11895911-11895930 | MS.gene31652:intron | 30.0% |
| !!! | CAATTTTAGCTGTGTCATTA+TGG | - | chr1.1:11899714-11899733 | None:intergenic | 30.0% |
| AAAAATGAACAGCCTACTTG+AGG | + | chr1.1:11899326-11899345 | MS.gene31652:intron | 35.0% | |
| AAAGTTCCTCTGTGATGTTA+TGG | + | chr1.1:11898679-11898698 | MS.gene31652:intron | 35.0% | |
| AACCATTTGTGGAGAATTGT+TGG | + | chr1.1:11895481-11895500 | MS.gene31652:CDS | 35.0% | |
| AACCTCCAAAGATTAACGAA+AGG | - | chr1.1:11898771-11898790 | None:intergenic | 35.0% | |
| AAGAAGCAGTTGCCAATTAA+TGG | + | chr1.1:11898570-11898589 | MS.gene31652:CDS | 35.0% | |
| AAGAGTTTGTCAACCATTTG+TGG | + | chr1.1:11895470-11895489 | MS.gene31652:CDS | 35.0% | |
| AATGCGTTATGGAAAAGGAA+AGG | + | chr1.1:11898916-11898935 | MS.gene31652:intron | 35.0% | |
| ACAATGATAATTCATCCGAC+AGG | - | chr1.1:11899200-11899219 | None:intergenic | 35.0% | |
| ACATTAATGCTGCCAACATA+AGG | + | chr1.1:11896838-11896857 | MS.gene31652:intron | 35.0% | |
| ACCATGCAAAAAATGAGCTA+GGG | - | chr1.1:11899648-11899667 | None:intergenic | 35.0% | |
| ACCATTTGTGGAGAATTGTT+GGG | + | chr1.1:11895482-11895501 | MS.gene31652:CDS | 35.0% | |
| ACCTCCAAAGATTAACGAAA+GGG | - | chr1.1:11898770-11898789 | None:intergenic | 35.0% | |
| AGAAGCAGTTGCCAATTAAT+GGG | + | chr1.1:11898571-11898590 | MS.gene31652:CDS | 35.0% | |
| AGATAACTAGAGACATGTGA+TGG | + | chr1.1:11896284-11896303 | MS.gene31652:intron | 35.0% | |
| ATAACATCACAGAGGAACTT+TGG | - | chr1.1:11898680-11898699 | None:intergenic | 35.0% | |
| ATACTCTATTACCTTGGTTC+AGG | - | chr1.1:11899089-11899108 | None:intergenic | 35.0% | |
| ATCTGGTAAGGAATATACTC+AGG | + | chr1.1:11898998-11899017 | MS.gene31652:intron | 35.0% | |
| ATGTGAGTATGAATCTGGTA+AGG | + | chr1.1:11898986-11899005 | MS.gene31652:intron | 35.0% | |
| ATTGACCAAGTAGCGATTAT+TGG | + | chr1.1:11897860-11897879 | MS.gene31652:intron | 35.0% | |
| CAAATGGAAAATTCCAAGGA+TGG | - | chr1.1:11897803-11897822 | None:intergenic | 35.0% | |
| CCAAGACCTCAAAAAAGAAA+CGG | + | chr1.1:11898547-11898566 | MS.gene31652:CDS | 35.0% | |
| CTTAATACATGAACAGTGAG+CGG | + | chr1.1:11896246-11896265 | MS.gene31652:intron | 35.0% | |
| GAAAGTTTCATACCAATCTC+TGG | + | chr1.1:11897455-11897474 | MS.gene31652:intron | 35.0% | |
| GAAGCCATGATACAAGTTTA+AGG | - | chr1.1:11896206-11896225 | None:intergenic | 35.0% | |
| GACACAAATGGAAAATTCCA+AGG | - | chr1.1:11897807-11897826 | None:intergenic | 35.0% | |
| GCAAAACATTTACGTTGTGT+TGG | + | chr1.1:11899032-11899051 | MS.gene31652:CDS | 35.0% | |
| GTGTAGTTCAAAGTTCAAAC+CGG | - | chr1.1:11896318-11896337 | None:intergenic | 35.0% | |
| GTGTATACATCCTTAGTGAA+TGG | - | chr1.1:11898197-11898216 | None:intergenic | 35.0% | |
| GTTTAAACCAGTCCTTATGT+TGG | - | chr1.1:11896853-11896872 | None:intergenic | 35.0% | |
| TCAAAGCATAAGTTGCAAGT+TGG | + | chr1.1:11896510-11896529 | MS.gene31652:intron | 35.0% | |
| TCAAGATGCACAAAATGCAA+TGG | + | chr1.1:11899790-11899809 | MS.gene31652:CDS | 35.0% | |
| TGCATCACTTGTAAAGACAA+TGG | + | chr1.1:11898024-11898043 | MS.gene31652:intron | 35.0% | |
| TGTGTTCAGAAAACAAGTAG+TGG | + | chr1.1:11895573-11895592 | MS.gene31652:intron | 35.0% | |
| TTAATACATGAACAGTGAGC+GGG | + | chr1.1:11896247-11896266 | MS.gene31652:intron | 35.0% | |
| TTAATCAGGCAAGACACAAA+TGG | - | chr1.1:11897819-11897838 | None:intergenic | 35.0% | |
| TTCTTGATATGGAACTCAAG+TGG | - | chr1.1:11897759-11897778 | None:intergenic | 35.0% | |
| TTCTTGTTCTGATGTTGTTC+AGG | + | chr1.1:11898395-11898414 | MS.gene31652:CDS | 35.0% | |
| TTGACCAAGTAGCGATTATT+GGG | + | chr1.1:11897861-11897880 | MS.gene31652:intron | 35.0% | |
| TTGCTTGCTCGGAATATTTA+AGG | + | chr1.1:11897396-11897415 | MS.gene31652:CDS | 35.0% | |
| TTGGCAGCATTAATGTTCTT+TGG | - | chr1.1:11896834-11896853 | None:intergenic | 35.0% | |
| TTGTATAAAACACATCGTCC+TGG | + | chr1.1:11896139-11896158 | MS.gene31652:intron | 35.0% | |
| TTGTCAGAAAACATGGTGAT+AGG | + | chr1.1:11898496-11898515 | MS.gene31652:CDS | 35.0% | |
| ! | ATCTTTGGAGGTTAAGCAAT+AGG | + | chr1.1:11898778-11898797 | MS.gene31652:intron | 35.0% |
| ! | ATGGCCTTAAACTTGTATCA+TGG | + | chr1.1:11896199-11896218 | MS.gene31652:intron | 35.0% |
| ! | ATTTAAGGTCTTTCAGGCAA+CGG | + | chr1.1:11897411-11897430 | MS.gene31652:CDS | 35.0% |
| ! | CAAATATCACAGCATTGAGT+AGG | + | chr1.1:11895621-11895640 | MS.gene31652:intron | 35.0% |
| ! | CACACAATTTTGTGAAGCTT+TGG | + | chr1.1:11898356-11898375 | MS.gene31652:CDS | 35.0% |
| ! | CGGAATATTTAAGGTCTTTC+AGG | + | chr1.1:11897405-11897424 | MS.gene31652:CDS | 35.0% |
| ! | GAGTTTTCACTTAGCATATG+AGG | + | chr1.1:11895762-11895781 | MS.gene31652:intron | 35.0% |
| ! | TCTATAGTTTGTCCAGAGAT+TGG | - | chr1.1:11897470-11897489 | None:intergenic | 35.0% |
| ! | TGGTGATAGGATTTTGCTAA+AGG | + | chr1.1:11898509-11898528 | MS.gene31652:CDS | 35.0% |
| ! | TTCTATTTTCCTCTTCCTGT+CGG | + | chr1.1:11899182-11899201 | MS.gene31652:intron | 35.0% |
| ! | TTTGGAACCTGAAATTCCAA+TGG | - | chr1.1:11897242-11897261 | None:intergenic | 35.0% |
| ! | TTTTGCTCCATTGGAATTTC+AGG | + | chr1.1:11897232-11897251 | MS.gene31652:intron | 35.0% |
| !! | AAGGAATATACTCAGGTTGA+AGG | + | chr1.1:11899005-11899024 | MS.gene31652:intron | 35.0% |
| !!! | AAGTTAGTTTTCGGTGTTTG+TGG | + | chr1.1:11895691-11895710 | MS.gene31652:intron | 35.0% |
| !!! | AGAAAAGAGTGCTTTTGACA+CGG | + | chr1.1:11899249-11899268 | MS.gene31652:CDS | 35.0% |
| !!! | CGTTTCTTTTTTGAGGTCTT+GGG | - | chr1.1:11898549-11898568 | None:intergenic | 35.0% |
| !!! | CTTCTTCCGTTTCTTTTTTG+AGG | - | chr1.1:11898556-11898575 | None:intergenic | 35.0% |
| ACAGCAAAGACAAACTTTCC+AGG | - | chr1.1:11899579-11899598 | None:intergenic | 40.0% | |
| ACCCTTTCGTTAATCTTTGG+AGG | + | chr1.1:11898766-11898785 | MS.gene31652:intron | 40.0% | |
| ACGAAATACAACACAACCAG+AGG | - | chr1.1:11897493-11897512 | None:intergenic | 40.0% | |
| ACTTCCCAATAATCGCTACT+TGG | - | chr1.1:11897868-11897887 | None:intergenic | 40.0% | |
| AGAGAATGAGTGCACATGAA+TGG | + | chr1.1:11896180-11896199 | MS.gene31652:intron | 40.0% | |
| ATAATTCATCCGACAGGAAG+AGG | - | chr1.1:11899194-11899213 | None:intergenic | 40.0% | |
| ATAGCCTCTTCAGTTGAAAG+TGG | - | chr1.1:11899832-11899851 | None:intergenic | 40.0% | |
| ATCCTTCGAAGTGCAAATCT+TGG | + | chr1.1:11898285-11898304 | MS.gene31652:CDS | 40.0% | |
| ATGCAAAAAATGAGCTAGGG+AGG | - | chr1.1:11899645-11899664 | None:intergenic | 40.0% | |
| ATGCTACCATAACATCACAG+AGG | - | chr1.1:11898688-11898707 | None:intergenic | 40.0% | |
| ATGCTAGTTGGCAAAGTCTT+TGG | - | chr1.1:11897260-11897279 | None:intergenic | 40.0% | |
| ATGTAGGGATACTAAGCCAA+TGG | + | chr1.1:11898455-11898474 | MS.gene31652:CDS | 40.0% | |
| CACCATGCAAAAAATGAGCT+AGG | - | chr1.1:11899649-11899668 | None:intergenic | 40.0% | |
| CACTTCGAAGGATAAGCTAT+TGG | - | chr1.1:11898278-11898297 | None:intergenic | 40.0% | |
| CAGAGCATACTCTATTACCT+TGG | - | chr1.1:11899095-11899114 | None:intergenic | 40.0% | |
| CCATTTGTGGAGAATTGTTG+GGG | + | chr1.1:11895483-11895502 | MS.gene31652:CDS | 40.0% | |
| GAATGTGTTCTGCATCAAGA+AGG | + | chr1.1:11896642-11896661 | MS.gene31652:intron | 40.0% | |
| GATGCACAAAATGCAATGGA+AGG | + | chr1.1:11899794-11899813 | MS.gene31652:CDS | 40.0% | |
| GGACTGTCACCAACTTTATT+GGG | + | chr1.1:11899924-11899943 | MS.gene31652:CDS | 40.0% | |
| GTCTCTAGTTATCTCTCATC+AGG | - | chr1.1:11896278-11896297 | None:intergenic | 40.0% | |
| GTTGGGGATTTCACTATCTA+AGG | + | chr1.1:11895499-11895518 | MS.gene31652:CDS | 40.0% | |
| GTTGTGACCAATCACTACAT+TGG | - | chr1.1:11897330-11897349 | None:intergenic | 40.0% | |
| TCCTTCGAAGTGCAAATCTT+GGG | + | chr1.1:11898286-11898305 | MS.gene31652:CDS | 40.0% | |
| TGGACTGTCACCAACTTTAT+TGG | + | chr1.1:11899923-11899942 | MS.gene31652:CDS | 40.0% | |
| TGGGATCGATTAAGTTTGAC+TGG | + | chr1.1:11897634-11897653 | MS.gene31652:intron | 40.0% | |
| TTATATGCTCCCAGAGTGAT+TGG | - | chr1.1:11898827-11898846 | None:intergenic | 40.0% | |
| TTCAAGGAACTCTTATGGAG+AGG | + | chr1.1:11899454-11899473 | MS.gene31652:intron | 40.0% | |
| TTCTCTCACAAGAGTCAGTT+AGG | + | chr1.1:11896223-11896242 | MS.gene31652:intron | 40.0% | |
| ! | AAGCATGTGTTTTGCTCCAT+TGG | + | chr1.1:11897223-11897242 | MS.gene31652:intron | 40.0% |
| ! | TGAGACTTTGCTGCATTGAT+TGG | + | chr1.1:11897526-11897545 | MS.gene31652:intron | 40.0% |
| !! | ATATACTCAGGTTGAAGGCT+TGG | + | chr1.1:11899010-11899029 | MS.gene31652:intron | 40.0% |
| !! | TTGGGTTGAAAGAGCTATTC+AGG | + | chr1.1:11898304-11898323 | MS.gene31652:CDS | 40.0% |
| !!! | CCGTTTCTTTTTTGAGGTCT+TGG | - | chr1.1:11898550-11898569 | None:intergenic | 40.0% |
| !!! | CTAGCTCATTTTTTGCATGG+TGG | + | chr1.1:11899647-11899666 | MS.gene31652:intron | 40.0% |
| !!! | GAAAAGAGTGCTTTTGACAC+GGG | + | chr1.1:11899250-11899269 | MS.gene31652:CDS | 40.0% |
| !!! | TCCCTAGCTCATTTTTTGCA+TGG | + | chr1.1:11899644-11899663 | MS.gene31652:intron | 40.0% |
| AATGCTGCCAACATAAGGAC+TGG | + | chr1.1:11896843-11896862 | MS.gene31652:intron | 45.0% | |
| ACCCAAGATTTGCACTTCGA+AGG | - | chr1.1:11898290-11898309 | None:intergenic | 45.0% | |
| ACCTTGGATCCAATAGTTGG+GGG | + | chr1.1:11898644-11898663 | MS.gene31652:intron | 45.0% | |
| AGAGGCTATTGAAGCTGCAA+AGG | + | chr1.1:11899843-11899862 | MS.gene31652:CDS | 45.0% | |
| AGGAGCTCCAATGTAGTGAT+TGG | + | chr1.1:11897320-11897339 | MS.gene31652:intron | 45.0% | |
| AGTCAGTCACTATTCAGACC+TGG | - | chr1.1:11896444-11896463 | None:intergenic | 45.0% | |
| ATGGATGCTCATTGCTTGCT+CGG | + | chr1.1:11897385-11897404 | MS.gene31652:CDS | 45.0% | |
| ATTGTGCTCCCTGCTCATAA+CGG | + | chr1.1:11899508-11899527 | MS.gene31652:intron | 45.0% | |
| CAACTATTGGATCCAAGGTG+CGG | - | chr1.1:11898643-11898662 | None:intergenic | 45.0% | |
| CACCTTGGATCCAATAGTTG+GGG | + | chr1.1:11898643-11898662 | MS.gene31652:intron | 45.0% | |
| CCAGATGACATATGCAGCTA+TGG | + | chr1.1:11897366-11897385 | MS.gene31652:CDS | 45.0% | |
| CCATAGCTGCATATGTCATC+TGG | - | chr1.1:11897369-11897388 | None:intergenic | 45.0% | |
| CCCCAACAATTCTCCACAAA+TGG | - | chr1.1:11895486-11895505 | None:intergenic | 45.0% | |
| CTGAATAGTGACTGACTGCA+AGG | + | chr1.1:11896447-11896466 | MS.gene31652:intron | 45.0% | |
| CTGGACAAACTATAGACCTC+TGG | + | chr1.1:11897474-11897493 | MS.gene31652:intron | 45.0% | |
| CTTCAAAGAAGCCTGAACCA+AGG | + | chr1.1:11899075-11899094 | MS.gene31652:CDS | 45.0% | |
| GAGAACTTTGATGAGTGGCA+AGG | + | chr1.1:11898615-11898634 | MS.gene31652:CDS | 45.0% | |
| GAGGCTATTGAAGCTGCAAA+GGG | + | chr1.1:11899844-11899863 | MS.gene31652:CDS | 45.0% | |
| GCACCTTGGATCCAATAGTT+GGG | + | chr1.1:11898642-11898661 | MS.gene31652:intron | 45.0% | |
| TATCCATCTCCCCCAACTAT+TGG | - | chr1.1:11898656-11898675 | None:intergenic | 45.0% | |
| TTCAGGTGATACCTTCAGCA+GGG | + | chr1.1:11898412-11898431 | MS.gene31652:CDS | 45.0% | |
| ! | ACATGTGATGGTGAAACTGC+CGG | + | chr1.1:11896296-11896315 | MS.gene31652:intron | 45.0% |
| ! | GAAGCCACTTTCAACTGAAG+AGG | + | chr1.1:11899825-11899844 | MS.gene31652:CDS | 45.0% |
| ! | GGTTCAGGCTTCTTTGAAGA+AGG | - | chr1.1:11899074-11899093 | None:intergenic | 45.0% |
| ! | GTCATCTGGTCTTCTGTAAG+AGG | - | chr1.1:11897355-11897374 | None:intergenic | 45.0% |
| ! | TCTCTGGGAAGCCCATTAAT+TGG | - | chr1.1:11898585-11898604 | None:intergenic | 45.0% |
| AACTCTAGCCCGTTATGAGC+AGG | - | chr1.1:11899520-11899539 | None:intergenic | 50.0% | |
| AATTCTACGCTGCAGGAGAG+TGG | + | chr1.1:11898244-11898263 | MS.gene31652:intron | 50.0% | |
| ACTCTAGCCCGTTATGAGCA+GGG | - | chr1.1:11899519-11899538 | None:intergenic | 50.0% | |
| CGCACCTTGGATCCAATAGT+TGG | + | chr1.1:11898641-11898660 | MS.gene31652:intron | 50.0% | |
| GATCCAATAGTTGGGGGAGA+TGG | + | chr1.1:11898650-11898669 | MS.gene31652:intron | 50.0% | |
| GTTCAGGTGATACCTTCAGC+AGG | + | chr1.1:11898411-11898430 | MS.gene31652:CDS | 50.0% | |
| TCAGGTGATACCTTCAGCAG+GGG | + | chr1.1:11898413-11898432 | MS.gene31652:CDS | 50.0% | |
| TCCCCCAACTATTGGATCCA+AGG | - | chr1.1:11898648-11898667 | None:intergenic | 50.0% | |
| TTGTGCTCCCTGCTCATAAC+GGG | + | chr1.1:11899509-11899528 | MS.gene31652:intron | 50.0% | |
| CAGGCAACGGTTACCGAAGA+AGG | + | chr1.1:11897424-11897443 | MS.gene31652:intron | 55.0% | |
| TGAATCACTGCCCCTGCTGA+AGG | - | chr1.1:11898426-11898445 | None:intergenic | 55.0% | |
| !! | ACGGGCTAGAGTTTGAGCCA+TGG | + | chr1.1:11899527-11899546 | MS.gene31652:intron | 55.0% |
| !! | AGTGGCAAGGTACCGCACCT+TGG | + | chr1.1:11898628-11898647 | MS.gene31652:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 11895389 | 11899948 | 11895389 | ID=MS.gene31652 |
| chr1.1 | mRNA | 11895389 | 11899948 | 11895389 | ID=MS.gene31652.t1;Parent=MS.gene31652 |
| chr1.1 | exon | 11895389 | 11895520 | 11895389 | ID=MS.gene31652.t1.exon1;Parent=MS.gene31652.t1 |
| chr1.1 | CDS | 11895389 | 11895520 | 11895389 | ID=cds.MS.gene31652.t1;Parent=MS.gene31652.t1 |
| chr1.1 | exon | 11897322 | 11897432 | 11897322 | ID=MS.gene31652.t1.exon2;Parent=MS.gene31652.t1 |
| chr1.1 | CDS | 11897322 | 11897432 | 11897322 | ID=cds.MS.gene31652.t1;Parent=MS.gene31652.t1 |
| chr1.1 | exon | 11898282 | 11898636 | 11898282 | ID=MS.gene31652.t1.exon3;Parent=MS.gene31652.t1 |
| chr1.1 | CDS | 11898282 | 11898636 | 11898282 | ID=cds.MS.gene31652.t1;Parent=MS.gene31652.t1 |
| chr1.1 | exon | 11899027 | 11899096 | 11899027 | ID=MS.gene31652.t1.exon4;Parent=MS.gene31652.t1 |
| chr1.1 | CDS | 11899027 | 11899096 | 11899027 | ID=cds.MS.gene31652.t1;Parent=MS.gene31652.t1 |
| chr1.1 | exon | 11899223 | 11899310 | 11899223 | ID=MS.gene31652.t1.exon5;Parent=MS.gene31652.t1 |
| chr1.1 | CDS | 11899223 | 11899310 | 11899223 | ID=cds.MS.gene31652.t1;Parent=MS.gene31652.t1 |
| chr1.1 | exon | 11899745 | 11899948 | 11899745 | ID=MS.gene31652.t1.exon6;Parent=MS.gene31652.t1 |
| chr1.1 | CDS | 11899745 | 11899948 | 11899745 | ID=cds.MS.gene31652.t1;Parent=MS.gene31652.t1 |
| Gene Sequence |
| Protein sequence |
