Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40969.t1 | XP_013461634.1 | 93.9 | 456 | 27 | 1 | 1 | 456 | 1 | 455 | 2.30E-218 | 768.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40969.t1 | Q9FGN8 | 40.9 | 193 | 97 | 2 | 117 | 292 | 304 | 496 | 2.9e-31 | 137.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40969.t1 | A0A072V0W9 | 93.9 | 456 | 27 | 1 | 1 | 456 | 1 | 455 | 1.7e-218 | 768.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene40969 | 0.861875 | 7.54E-64 | -1.69E-46 |
| MS.gene049178 | MS.gene40969 | 0.826638 | 2.43E-54 | -1.69E-46 |
| MS.gene049208 | MS.gene40969 | 0.888253 | 6.95E-73 | -1.69E-46 |
| MS.gene049264 | MS.gene40969 | 0.831487 | 1.62E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene40969 | 0.821423 | 4.07E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene40969 | 0.843444 | 1.40E-58 | -1.69E-46 |
| MS.gene049821 | MS.gene40969 | 0.804177 | 2.45E-49 | -1.69E-46 |
| MS.gene050253 | MS.gene40969 | 0.815776 | 7.77E-52 | -1.69E-46 |
| MS.gene050439 | MS.gene40969 | 0.826365 | 2.82E-54 | -1.69E-46 |
| MS.gene050556 | MS.gene40969 | 0.801896 | 7.25E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene40969 | 0.816039 | 6.79E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene40969 | 0.806407 | 8.35E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene40969 | 0.817919 | 2.57E-52 | -1.69E-46 |
| MS.gene051490 | MS.gene40969 | 0.804321 | 2.28E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene40969 | 0.835498 | 1.62E-56 | -1.69E-46 |
| MS.gene051700 | MS.gene40969 | 0.810754 | 9.85E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene40969 | 0.806391 | 8.41E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene40969 | 0.867247 | 1.58E-65 | -1.69E-46 |
| MS.gene052307 | MS.gene40969 | 0.822453 | 2.35E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene40969 | 0.801509 | 8.71E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene40969 | 0.816478 | 5.42E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene40969 | 0.834939 | 2.24E-56 | -1.69E-46 |
| MS.gene052773 | MS.gene40969 | 0.802655 | 5.06E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene40969 | 0.800346 | 1.50E-48 | -1.69E-46 |
| MS.gene052932 | MS.gene40969 | 0.811516 | 6.73E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene40969 | 0.819219 | 1.30E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene40969 | 0.800296 | 1.54E-48 | -1.69E-46 |
| MS.gene054139 | MS.gene40969 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene40969 | 0.806817 | 6.84E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene40969 | 0.800094 | 1.69E-48 | -1.69E-46 |
| MS.gene05458 | MS.gene40969 | 0.811215 | 7.83E-51 | -1.69E-46 |
| MS.gene05468 | MS.gene40969 | 0.801917 | 7.18E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene40969 | 0.818901 | 1.54E-52 | -1.69E-46 |
| MS.gene054943 | MS.gene40969 | 0.803816 | 2.91E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene40969 | 0.831237 | 1.87E-55 | -1.69E-46 |
| MS.gene055311 | MS.gene40969 | 0.928536 | 2.51E-92 | -1.69E-46 |
| MS.gene055313 | MS.gene40969 | 0.981136 | 7.34E-152 | -1.69E-46 |
| MS.gene055314 | MS.gene40969 | 0.93295 | 3.94E-95 | -1.69E-46 |
| MS.gene055469 | MS.gene40969 | 0.807062 | 6.07E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene40969 | 0.860838 | 1.56E-63 | -1.69E-46 |
| MS.gene055864 | MS.gene40969 | 0.806322 | 8.70E-50 | -1.69E-46 |
| MS.gene055926 | MS.gene40969 | 0.805875 | 1.08E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene40969 | 0.848217 | 7.06E-60 | -1.69E-46 |
| MS.gene056181 | MS.gene40969 | 0.832799 | 7.69E-56 | -1.69E-46 |
| MS.gene056308 | MS.gene40969 | 0.829045 | 6.41E-55 | -1.69E-46 |
| MS.gene056390 | MS.gene40969 | 0.830605 | 2.67E-55 | -1.69E-46 |
| MS.gene056509 | MS.gene40969 | 0.811634 | 6.35E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene40969 | 0.811707 | 6.12E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene40969 | 0.83374 | 4.48E-56 | -1.69E-46 |
| MS.gene057034 | MS.gene40969 | 0.811787 | 5.88E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene40969 | 0.817512 | 3.17E-52 | -1.69E-46 |
| MS.gene057360 | MS.gene40969 | 0.837879 | 4.01E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene40969 | 0.844429 | 7.60E-59 | -1.69E-46 |
| MS.gene058081 | MS.gene40969 | 0.802248 | 6.14E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene40969 | 0.800229 | 1.59E-48 | -1.69E-46 |
| MS.gene058639 | MS.gene40969 | 0.817865 | 2.64E-52 | -1.69E-46 |
| MS.gene058852 | MS.gene40969 | 0.803548 | 3.31E-49 | -1.69E-46 |
| MS.gene059144 | MS.gene40969 | 0.813112 | 3.02E-51 | -1.69E-46 |
| MS.gene059170 | MS.gene40969 | 0.810383 | 1.18E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene40969 | 0.819071 | 1.41E-52 | -1.69E-46 |
| MS.gene059227 | MS.gene40969 | 0.811102 | 8.28E-51 | -1.69E-46 |
| MS.gene059439 | MS.gene40969 | 0.823311 | 1.48E-53 | -1.69E-46 |
| MS.gene059725 | MS.gene40969 | 0.823895 | 1.08E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene40969 | 0.823899 | 1.08E-53 | -1.69E-46 |
| MS.gene06010 | MS.gene40969 | 0.808915 | 2.45E-50 | -1.69E-46 |
| MS.gene060365 | MS.gene40969 | 0.806908 | 6.55E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene40969 | 0.803369 | 3.60E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene40969 | 0.822298 | 2.55E-53 | -1.69E-46 |
| MS.gene060869 | MS.gene40969 | 0.814278 | 1.67E-51 | -1.69E-46 |
| MS.gene060870 | MS.gene40969 | 0.816438 | 5.53E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene40969 | 0.805361 | 1.39E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene40969 | 0.806132 | 9.54E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene40969 | 0.802695 | 4.97E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene40969 | 0.800445 | 1.44E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40969.t1 | MTR_3g097570 | 96.930 | 456 | 13 | 1 | 1 | 456 | 1 | 455 | 0.0 | 914 |
| MS.gene40969.t1 | MTR_8g446550 | 42.654 | 211 | 111 | 2 | 107 | 316 | 321 | 522 | 9.46e-45 | 166 |
| MS.gene40969.t1 | MTR_7g105920 | 46.354 | 192 | 95 | 4 | 108 | 292 | 265 | 455 | 3.24e-43 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40969.t1 | AT5G23610 | 37.736 | 371 | 199 | 6 | 108 | 452 | 124 | 488 | 4.84e-77 | 249 |
| MS.gene40969.t1 | AT5G23610 | 37.634 | 372 | 199 | 6 | 108 | 452 | 124 | 489 | 7.12e-77 | 248 |
| MS.gene40969.t1 | AT5G51330 | 43.842 | 203 | 97 | 2 | 107 | 292 | 290 | 492 | 5.46e-45 | 166 |
| MS.gene40969.t1 | AT5G51330 | 43.842 | 203 | 97 | 2 | 107 | 292 | 294 | 496 | 5.82e-45 | 166 |
Find 132 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTGCAGGAGATGTTTA+TGG | 0.210272 | 3.2:+81281543 | MS.gene40969:intron |
| CAACTCGTTGATAATGTTTC+AGG | 0.243745 | 3.2:+81281441 | MS.gene40969:CDS |
| TTACTATCTGGAAAATATAT+TGG | 0.261036 | 3.2:-81279804 | None:intergenic |
| AAGTTCAGTACTTCTTCATT+TGG | 0.283704 | 3.2:-81280488 | None:intergenic |
| CTTAGTACAGGTCGGGTTAT+TGG | 0.284312 | 3.2:-81280180 | None:intergenic |
| CGTAAATACATCGGTGATAC+TGG | 0.287030 | 3.2:+81280213 | MS.gene40969:CDS |
| TCCCTCCAGGTGCCACTTTA+CGG | 0.303889 | 3.2:-81280266 | None:intergenic |
| GTTCAACCCTGACGGAATTA+TGG | 0.307173 | 3.2:+81280308 | MS.gene40969:CDS |
| CAGTATCACCGATGTATTTA+CGG | 0.324775 | 3.2:-81280212 | None:intergenic |
| GATGACGTCCGCGAGGAGGC+TGG | 0.343634 | 3.2:+81280357 | MS.gene40969:CDS |
| CATCGTCAACAGGCATTCAT+TGG | 0.346643 | 3.2:+81279696 | MS.gene40969:CDS |
| TGAAGTGGAGCAACATCTTA+TGG | 0.347796 | 3.2:+81280955 | MS.gene40969:CDS |
| GTATATTAACAGGGCAAGTA+TGG | 0.358640 | 3.2:+81280911 | MS.gene40969:intron |
| GGATACCACCATCCACTGTT+AGG | 0.358688 | 3.2:+81280397 | MS.gene40969:CDS |
| TTAACAGTTGTAGAAGAATC+TGG | 0.359007 | 3.2:-81281400 | None:intergenic |
| TCTTCATTGAGTGGCTGAAT+TGG | 0.364573 | 3.2:-81281178 | None:intergenic |
| CCGTCATCCTGAGTATTGTC+TGG | 0.369164 | 3.2:-81281076 | None:intergenic |
| GGTTGATCCTCTTGCATTGT+GGG | 0.373824 | 3.2:-81281367 | None:intergenic |
| GTGGATGGTGGTATCCAATA+GGG | 0.379280 | 3.2:-81280390 | None:intergenic |
| TTAGTACAGGTCGGGTTATT+GGG | 0.379451 | 3.2:-81280179 | None:intergenic |
| CTGGGGTTGATGACCCCTAT+TGG | 0.380387 | 3.2:+81280376 | MS.gene40969:CDS |
| AGTTCAGTACTTCTTCATTT+GGG | 0.387011 | 3.2:-81280487 | None:intergenic |
| GGCCATCCGTGCCCCTTGTC+AGG | 0.402712 | 3.2:+81280419 | MS.gene40969:CDS |
| GGATTCTTTGAAGAATTTGC+AGG | 0.406927 | 3.2:+81280789 | MS.gene40969:CDS |
| GAAGAATCTGGGGTGACATT+AGG | 0.411888 | 3.2:-81281388 | None:intergenic |
| GATGTATCAAACACTGTATA+TGG | 0.414656 | 3.2:+81281607 | MS.gene40969:CDS |
| ATTCAAATGGAAAGAAAAGA+TGG | 0.422345 | 3.2:+81281570 | MS.gene40969:CDS |
| CGTCAGGGTTGAACCATCTT+CGG | 0.426408 | 3.2:-81280299 | None:intergenic |
| AGTGGATGGTGGTATCCAAT+AGG | 0.428009 | 3.2:-81280391 | None:intergenic |
| AGTATGGTGAGTTCGCGATA+TGG | 0.430148 | 3.2:+81280927 | MS.gene40969:CDS |
| GAGAAAGAAGCATGACAGTA+AGG | 0.439317 | 3.2:+81279974 | MS.gene40969:CDS |
| GAAACTGCTTAAAATAGAAA+TGG | 0.441793 | 3.2:+81280464 | MS.gene40969:CDS |
| AGGATGACGGATTGGCAACT+TGG | 0.448641 | 3.2:+81281089 | MS.gene40969:CDS |
| TGTTTATGGATTTATTCAAA+TGG | 0.448971 | 3.2:+81281557 | MS.gene40969:CDS |
| AGCTGCAGGGATGGATAGGT+GGG | 0.450023 | 3.2:+81279668 | None:intergenic |
| CGGAATTATGGAGTATTGGT+TGG | 0.461416 | 3.2:+81280320 | MS.gene40969:CDS |
| TTTGGATAGCAGAGATATGC+AGG | 0.462744 | 3.2:+81280572 | MS.gene40969:intron |
| CTGACGGAATTATGGAGTAT+TGG | 0.463406 | 3.2:+81280316 | MS.gene40969:CDS |
| GTGGGAGGTGCTGAAGGCAG+AGG | 0.464284 | 3.2:+81280140 | MS.gene40969:CDS |
| ATGACGTCCGCGAGGAGGCT+GGG | 0.464713 | 3.2:+81280358 | MS.gene40969:CDS |
| CAATACTCCATAATTCCGTC+AGG | 0.466213 | 3.2:-81280315 | None:intergenic |
| CTAAAAGTGGTGCACTCTCT+TGG | 0.466483 | 3.2:-81281010 | None:intergenic |
| CAACCGCCTAACTGAAATCA+TGG | 0.467995 | 3.2:+81280768 | MS.gene40969:CDS |
| GTGGGGTGTTCATCGTCAAC+AGG | 0.476341 | 3.2:+81279686 | MS.gene40969:CDS |
| ACCTCAATAAGCTGACCATA+AGG | 0.476397 | 3.2:-81279909 | None:intergenic |
| AGTATCACCGATGTATTTAC+GGG | 0.476913 | 3.2:-81280211 | None:intergenic |
| GAGCTGCAGGGATGGATAGG+TGG | 0.485530 | 3.2:+81279667 | None:intergenic |
| AAGAATCCATGATTTCAGTT+AGG | 0.487830 | 3.2:-81280774 | None:intergenic |
| TGGGAGGTGCTGAAGGCAGA+GGG | 0.492323 | 3.2:+81280141 | MS.gene40969:CDS |
| TAACAGTTGTAGAAGAATCT+GGG | 0.496287 | 3.2:-81281399 | None:intergenic |
| AGCTGATCTTAGTACAGGTC+GGG | 0.496477 | 3.2:-81280187 | None:intergenic |
| AGCATGACAGTAAGGATAGA+TGG | 0.497539 | 3.2:+81279982 | MS.gene40969:CDS |
| GGACTGATCGGTTCCGAAGA+TGG | 0.500965 | 3.2:+81280286 | MS.gene40969:CDS |
| GCCTTATGGTCAGCTTATTG+AGG | 0.505640 | 3.2:+81279908 | MS.gene40969:CDS |
| TGACGTCCGCGAGGAGGCTG+GGG | 0.505696 | 3.2:+81280359 | MS.gene40969:CDS |
| AGGTTGATCCTCTTGCATTG+TGG | 0.510835 | 3.2:-81281368 | None:intergenic |
| TTGGTTGGAGAGGGCTGACT+TGG | 0.513352 | 3.2:+81280335 | MS.gene40969:CDS |
| ATCCTGACAAGGGGCACGGA+TGG | 0.514234 | 3.2:-81280421 | None:intergenic |
| TTAGTCAGTTCTTCATTGAG+TGG | 0.514458 | 3.2:-81281187 | None:intergenic |
| GAGGTGAAAGAGGAGTATGC+TGG | 0.516120 | 3.2:+81279927 | MS.gene40969:CDS |
| GAAGAATCAGCATCCTGACA+AGG | 0.520021 | 3.2:-81280432 | None:intergenic |
| TTAGAGCTGCAGGGATGGAT+AGG | 0.521038 | 3.2:+81279664 | None:intergenic |
| GTCAACAGGCATTCATTGGT+TGG | 0.523113 | 3.2:+81279700 | MS.gene40969:CDS |
| TTCTGTTACTAGGAAGGAAG+AGG | 0.524484 | 3.2:+81279740 | MS.gene40969:CDS |
| GACGGATTGGCAACTTGGAT+AGG | 0.527728 | 3.2:+81281094 | MS.gene40969:CDS |
| CTGAATTGGCATGCCTGAGT+AGG | 0.528503 | 3.2:-81281164 | None:intergenic |
| TTCTACAACTGTTAATTCAA+AGG | 0.528922 | 3.2:+81281408 | MS.gene40969:CDS |
| CGGGCAGCTGATCTTAGTAC+AGG | 0.536563 | 3.2:-81280192 | None:intergenic |
| GAAGCTTAGAGAGGTGAAAG+AGG | 0.537563 | 3.2:+81279884 | MS.gene40969:CDS |
| CAGCTGATCTTAGTACAGGT+CGG | 0.541011 | 3.2:-81280188 | None:intergenic |
| ACGGATTGGCAACTTGGATA+GGG | 0.541184 | 3.2:+81281095 | MS.gene40969:CDS |
| GGTCAACGTGCTTCAGTAAG+TGG | 0.542753 | 3.2:-81280245 | None:intergenic |
| AAGCATGTGGGAGGTGCTGA+AGG | 0.543073 | 3.2:+81280134 | MS.gene40969:CDS |
| TTTCTTGAAGATCCCTACTC+AGG | 0.547860 | 3.2:+81281151 | MS.gene40969:CDS |
| TCACCTCTCTAAGCTGACTA+AGG | 0.547878 | 3.2:-81279845 | None:intergenic |
| AAAGATGGAGCAGCAGCTGT+TGG | 0.548685 | 3.2:+81281585 | MS.gene40969:CDS |
| TTCTGAAGGAGGACTAAAAG+TGG | 0.548840 | 3.2:-81281023 | None:intergenic |
| GATACCACCATCCACTGTTA+GGG | 0.550025 | 3.2:+81280398 | MS.gene40969:CDS |
| GAAAACTGAAAGTAACATGA+TGG | 0.552332 | 3.2:+81280617 | MS.gene40969:CDS |
| GGAGGTGCTGAAGGCAGAGG+GGG | 0.552568 | 3.2:+81280143 | MS.gene40969:CDS |
| TATGGAGTATTGGTTGGAGA+GGG | 0.553818 | 3.2:+81280326 | MS.gene40969:CDS |
| AGGTGAAAGAGGAGTATGCT+GGG | 0.555325 | 3.2:+81279928 | MS.gene40969:CDS |
| CGGAACCGATCAGTCCCTCC+AGG | 0.556285 | 3.2:-81280279 | None:intergenic |
| CCTTTGAAATAGTCATGTTG+AGG | 0.561225 | 3.2:+81281336 | MS.gene40969:intron |
| CTCTAAGCTGACTAAGGCTG+AGG | 0.562519 | 3.2:-81279839 | None:intergenic |
| GCAGGAGCTCATTGCCCAGA+AGG | 0.562853 | 3.2:+81280590 | MS.gene40969:CDS |
| AAGAACTGACTAACAAGAAG+AGG | 0.565105 | 3.2:+81281197 | MS.gene40969:CDS |
| TGAATTGGCATGCCTGAGTA+GGG | 0.572022 | 3.2:-81281163 | None:intergenic |
| CGCGATATGGAAAACTGAAG+TGG | 0.573314 | 3.2:+81280940 | MS.gene40969:CDS |
| TCAGCTTATTGAGGTGAAAG+AGG | 0.574832 | 3.2:+81279917 | MS.gene40969:CDS |
| AATCCATGATTTCAGTTAGG+CGG | 0.575656 | 3.2:-81280771 | None:intergenic |
| TGGCACCTGGAGGGACTGAT+CGG | 0.577271 | 3.2:+81280274 | MS.gene40969:CDS |
| CGTCATCCTGAGTATTGTCT+GGG | 0.578265 | 3.2:-81281075 | None:intergenic |
| CGAAGATGGTTCAACCCTGA+CGG | 0.579824 | 3.2:+81280300 | MS.gene40969:CDS |
| TACTAGGAAGGAAGAGGACT+CGG | 0.580045 | 3.2:+81279746 | MS.gene40969:CDS |
| CTTGGATGACGTCCGCGAGG+AGG | 0.584682 | 3.2:+81280353 | MS.gene40969:CDS |
| GAAGCACGTTGACCGTAAAG+TGG | 0.585051 | 3.2:+81280254 | MS.gene40969:CDS |
| CAGCATCCTGACAAGGGGCA+CGG | 0.588448 | 3.2:-81280425 | None:intergenic |
| CAATACTCAGGATGACGGAT+TGG | 0.588917 | 3.2:+81281081 | MS.gene40969:CDS |
| CGGATGGCCCTAACAGTGGA+TGG | 0.589422 | 3.2:-81280405 | None:intergenic |
| CTTGCAAGGAACTTATGAAG+TGG | 0.591648 | 3.2:+81280731 | MS.gene40969:CDS |
| TCTTCAAGAAAACACTCTTG+TGG | 0.592785 | 3.2:-81281139 | None:intergenic |
| TCTTCCTTCCTAGTAACAGA+AGG | 0.594292 | 3.2:-81279738 | None:intergenic |
| TTATGGAGTATTGGTTGGAG+AGG | 0.594798 | 3.2:+81280325 | MS.gene40969:CDS |
| GAGGTGAAAGAGGAGCCTTA+TGG | 0.602537 | 3.2:+81279894 | MS.gene40969:CDS |
| AGGATAGATGGTCAAGCGAG+AGG | 0.602598 | 3.2:+81279994 | MS.gene40969:CDS |
| CAGCCTTAGTCAGCTTAGAG+AGG | 0.603304 | 3.2:+81279842 | MS.gene40969:CDS |
| CACTAACCCAGACAATACTC+AGG | 0.613204 | 3.2:+81281069 | MS.gene40969:CDS |
| AAGAATCAGCATCCTGACAA+GGG | 0.613306 | 3.2:-81280431 | None:intergenic |
| ACCGTAAAGTGGCACCTGGA+GGG | 0.620448 | 3.2:+81280265 | MS.gene40969:CDS |
| GGCACGGATGGCCCTAACAG+TGG | 0.626312 | 3.2:-81280409 | None:intergenic |
| GCTGATACCCACAATGCAAG+AGG | 0.632260 | 3.2:+81281360 | MS.gene40969:CDS |
| ACTCTAATGTAGGTACAAGT+CGG | 0.634040 | 3.2:+81280104 | MS.gene40969:intron |
| GTTGACCGTAAAGTGGCACC+TGG | 0.634407 | 3.2:+81280261 | MS.gene40969:CDS |
| CCAGACAATACTCAGGATGA+CGG | 0.639358 | 3.2:+81281076 | MS.gene40969:CDS |
| AACAGTTGTAGAAGAATCTG+GGG | 0.639407 | 3.2:-81281398 | None:intergenic |
| TGGATGGTGGTATCCAATAG+GGG | 0.643639 | 3.2:-81280389 | None:intergenic |
| AGTCGGCTGAACAAAGCATG+TGG | 0.643899 | 3.2:+81280121 | MS.gene40969:CDS |
| GTCGGCTGAACAAAGCATGT+GGG | 0.649689 | 3.2:+81280122 | MS.gene40969:CDS |
| GTCTTGTGAGAAGCTTAGAG+AGG | 0.651620 | 3.2:+81279875 | MS.gene40969:CDS |
| GGCTGAACAAAGCATGTGGG+AGG | 0.654214 | 3.2:+81280125 | MS.gene40969:CDS |
| AACTGAAAGTAACATGATGG+AGG | 0.656525 | 3.2:+81280620 | MS.gene40969:CDS |
| TCAGCTGCCCGTAAATACAT+CGG | 0.660244 | 3.2:+81280204 | MS.gene40969:CDS |
| CATCAACCCCAGCCTCCTCG+CGG | 0.661718 | 3.2:-81280365 | None:intergenic |
| AGAATCAGCATCCTGACAAG+GGG | 0.662008 | 3.2:-81280430 | None:intergenic |
| GGGAGGTGCTGAAGGCAGAG+GGG | 0.662463 | 3.2:+81280142 | MS.gene40969:CDS |
| GACCGTAAAGTGGCACCTGG+AGG | 0.675219 | 3.2:+81280264 | MS.gene40969:CDS |
| AATACTCCATAATTCCGTCA+GGG | 0.681790 | 3.2:-81280314 | None:intergenic |
| TCAATGGCAGAAGACTTGCA+AGG | 0.688837 | 3.2:+81280717 | MS.gene40969:intron |
| GCTGCAGGGATGGATAGGTG+GGG | 0.693071 | 3.2:+81279669 | None:intergenic |
| ATGGCCCTAACAGTGGATGG+TGG | 0.700088 | 3.2:-81280402 | None:intergenic |
| TGACTTGGATGACGTCCGCG+AGG | 0.712793 | 3.2:+81280350 | MS.gene40969:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCCTAATAATTTTATT+TGG | + | chr3.2:81280554-81280573 | MS.gene40969:intron | 10.0% |
| !! | ATTAACTCTATATAATTACT+TGG | - | chr3.2:81280079-81280098 | None:intergenic | 15.0% |
| !! | GTATATATTCAAGATTTAAT+GGG | + | chr3.2:81280811-81280830 | MS.gene40969:intron | 15.0% |
| !!! | TGAATGCTTTAATATTTTAA+TGG | + | chr3.2:81280650-81280669 | MS.gene40969:intron | 15.0% |
| !! | AATAGATCATGAATATAAGA+AGG | - | chr3.2:81281520-81281539 | None:intergenic | 20.0% |
| !! | GCTATCCAAATAAAATTATT+AGG | - | chr3.2:81280562-81280581 | None:intergenic | 20.0% |
| !! | GGTATATATTCAAGATTTAA+TGG | + | chr3.2:81280810-81280829 | MS.gene40969:intron | 20.0% |
| !! | TGTTTATGGATTTATTCAAA+TGG | + | chr3.2:81281557-81281576 | MS.gene40969:CDS | 20.0% |
| !! | TTACTATCTGGAAAATATAT+TGG | - | chr3.2:81279807-81279826 | None:intergenic | 20.0% |
| !!! | AAATTAACTTTTTTCCTTCT+TGG | - | chr3.2:81281295-81281314 | None:intergenic | 20.0% |
| ! | AACTCTATATAATTACTTGG+TGG | - | chr3.2:81280076-81280095 | None:intergenic | 25.0% |
| ! | ATTCAAATGGAAAGAAAAGA+TGG | + | chr3.2:81281570-81281589 | MS.gene40969:CDS | 25.0% |
| ! | GAAACTGCTTAAAATAGAAA+TGG | + | chr3.2:81280464-81280483 | MS.gene40969:CDS | 25.0% |
| ! | TGCTTTATGTTGAATTTCAA+TGG | + | chr3.2:81280701-81280720 | MS.gene40969:intron | 25.0% |
| ! | TTCTACAACTGTTAATTCAA+AGG | + | chr3.2:81281408-81281427 | MS.gene40969:CDS | 25.0% |
| !! | ATTTTCCAGATAGTAAGAAA+AGG | + | chr3.2:81279811-81279830 | MS.gene40969:CDS | 25.0% |
| !! | TGTAGTTCTGTATATTAACA+GGG | + | chr3.2:81280902-81280921 | MS.gene40969:intron | 25.0% |
| !!! | TGATCTATTATTTTTCTTGC+AGG | + | chr3.2:81281531-81281550 | MS.gene40969:intron | 25.0% |
| AAGAATCCATGATTTCAGTT+AGG | - | chr3.2:81280777-81280796 | None:intergenic | 30.0% | |
| AAGGAAAAAATGGGAATAAG+TGG | - | chr3.2:81281491-81281510 | None:intergenic | 30.0% | |
| AAGTTCAGTACTTCTTCATT+TGG | - | chr3.2:81280491-81280510 | None:intergenic | 30.0% | |
| AGATCATGAATATAAGAAGG+TGG | - | chr3.2:81281517-81281536 | None:intergenic | 30.0% | |
| AGTTCAGTACTTCTTCATTT+GGG | - | chr3.2:81280490-81280509 | None:intergenic | 30.0% | |
| CTTCAGAAAAATGGAAAGAT+TGG | + | chr3.2:81281038-81281057 | MS.gene40969:CDS | 30.0% | |
| GAAAACTGAAAGTAACATGA+TGG | + | chr3.2:81280617-81280636 | MS.gene40969:CDS | 30.0% | |
| GATGTATCAAACACTGTATA+TGG | + | chr3.2:81281607-81281626 | MS.gene40969:CDS | 30.0% | |
| GGAGAAATCAAACAAACAAA+AGG | - | chr3.2:81280860-81280879 | None:intergenic | 30.0% | |
| TAACAGTTGTAGAAGAATCT+GGG | - | chr3.2:81281402-81281421 | None:intergenic | 30.0% | |
| TAAGTCAGATATCACATAAG+TGG | - | chr3.2:81280881-81280900 | None:intergenic | 30.0% | |
| TTAACAGTTGTAGAAGAATC+TGG | - | chr3.2:81281403-81281422 | None:intergenic | 30.0% | |
| TTAATCATGCACTCTAATGT+AGG | + | chr3.2:81280094-81280113 | MS.gene40969:intron | 30.0% | |
| ! | CTGTAGTTCTGTATATTAAC+AGG | + | chr3.2:81280901-81280920 | MS.gene40969:intron | 30.0% |
| ! | TTCAGTTTTCTTTTCCTTCT+GGG | - | chr3.2:81280607-81280626 | None:intergenic | 30.0% |
| ! | TTTCAGTTTTCTTTTCCTTC+TGG | - | chr3.2:81280608-81280627 | None:intergenic | 30.0% |
| !! | CAATCTTTCCATTTTTCTGA+AGG | - | chr3.2:81281040-81281059 | None:intergenic | 30.0% |
| AACAGTTGTAGAAGAATCTG+GGG | - | chr3.2:81281401-81281420 | None:intergenic | 35.0% | |
| AACTGAAAGTAACATGATGG+AGG | + | chr3.2:81280620-81280639 | MS.gene40969:CDS | 35.0% | |
| AAGAACTGACTAACAAGAAG+AGG | + | chr3.2:81281197-81281216 | MS.gene40969:CDS | 35.0% | |
| AAGGTGGTAGAAGGAAAAAA+TGG | - | chr3.2:81281501-81281520 | None:intergenic | 35.0% | |
| AATACTCCATAATTCCGTCA+GGG | - | chr3.2:81280317-81280336 | None:intergenic | 35.0% | |
| AATCCATGATTTCAGTTAGG+CGG | - | chr3.2:81280774-81280793 | None:intergenic | 35.0% | |
| ACTCTAATGTAGGTACAAGT+CGG | + | chr3.2:81280104-81280123 | MS.gene40969:intron | 35.0% | |
| AGGTGGTAGAAGGAAAAAAT+GGG | - | chr3.2:81281500-81281519 | None:intergenic | 35.0% | |
| AGTATCACCGATGTATTTAC+GGG | - | chr3.2:81280214-81280233 | None:intergenic | 35.0% | |
| CAGTATCACCGATGTATTTA+CGG | - | chr3.2:81280215-81280234 | None:intergenic | 35.0% | |
| CCTCAACATGACTATTTCAA+AGG | - | chr3.2:81281339-81281358 | None:intergenic | 35.0% | |
| GAATATAAGAAGGTGGTAGA+AGG | - | chr3.2:81281510-81281529 | None:intergenic | 35.0% | |
| GTATATTAACAGGGCAAGTA+TGG | + | chr3.2:81280911-81280930 | MS.gene40969:intron | 35.0% | |
| TCTTCAAGAAAACACTCTTG+TGG | - | chr3.2:81281142-81281161 | None:intergenic | 35.0% | |
| TTAGTCAGTTCTTCATTGAG+TGG | - | chr3.2:81281190-81281209 | None:intergenic | 35.0% | |
| TTAGTCCTCCTTCAGAAAAA+TGG | + | chr3.2:81281029-81281048 | MS.gene40969:CDS | 35.0% | |
| TTTCTTGCAGGAGATGTTTA+TGG | + | chr3.2:81281543-81281562 | MS.gene40969:intron | 35.0% | |
| ! | GGATTCTTTGAAGAATTTGC+AGG | + | chr3.2:81280789-81280808 | MS.gene40969:CDS | 35.0% |
| ! | GTTCTTTTCCTTCTGTTACT+AGG | + | chr3.2:81279730-81279749 | MS.gene40969:CDS | 35.0% |
| ! | TTTTCCTTCTGTTACTAGGA+AGG | + | chr3.2:81279734-81279753 | MS.gene40969:CDS | 35.0% |
| !! | CAACTCGTTGATAATGTTTC+AGG | + | chr3.2:81281441-81281460 | MS.gene40969:CDS | 35.0% |
| !! | CCTTTGAAATAGTCATGTTG+AGG | + | chr3.2:81281336-81281355 | MS.gene40969:intron | 35.0% |
| !! | TCTTTCCATTTTTCTGAAGG+AGG | - | chr3.2:81281037-81281056 | None:intergenic | 35.0% |
| AAGAATCAGCATCCTGACAA+GGG | - | chr3.2:81280434-81280453 | None:intergenic | 40.0% | |
| ACCTCAATAAGCTGACCATA+AGG | - | chr3.2:81279912-81279931 | None:intergenic | 40.0% | |
| AGCATGACAGTAAGGATAGA+TGG | + | chr3.2:81279982-81280001 | MS.gene40969:CDS | 40.0% | |
| CAATACTCCATAATTCCGTC+AGG | - | chr3.2:81280318-81280337 | None:intergenic | 40.0% | |
| CGTAAATACATCGGTGATAC+TGG | + | chr3.2:81280213-81280232 | MS.gene40969:CDS | 40.0% | |
| CTGACGGAATTATGGAGTAT+TGG | + | chr3.2:81280316-81280335 | MS.gene40969:CDS | 40.0% | |
| CTTGCAAGGAACTTATGAAG+TGG | + | chr3.2:81280731-81280750 | MS.gene40969:CDS | 40.0% | |
| TCAGCTTATTGAGGTGAAAG+AGG | + | chr3.2:81279917-81279936 | MS.gene40969:CDS | 40.0% | |
| TCTTCATTGAGTGGCTGAAT+TGG | - | chr3.2:81281181-81281200 | None:intergenic | 40.0% | |
| TCTTCCTTCCTAGTAACAGA+AGG | - | chr3.2:81279741-81279760 | None:intergenic | 40.0% | |
| TGAAGTGGAGCAACATCTTA+TGG | + | chr3.2:81280955-81280974 | MS.gene40969:CDS | 40.0% | |
| TTAGTACAGGTCGGGTTATT+GGG | - | chr3.2:81280182-81280201 | None:intergenic | 40.0% | |
| TTCTGTTACTAGGAAGGAAG+AGG | + | chr3.2:81279740-81279759 | MS.gene40969:CDS | 40.0% | |
| TTTCTTGAAGATCCCTACTC+AGG | + | chr3.2:81281151-81281170 | MS.gene40969:CDS | 40.0% | |
| TTTGGATAGCAGAGATATGC+AGG | + | chr3.2:81280572-81280591 | MS.gene40969:intron | 40.0% | |
| ! | CGCTTCCTTTTCTTACTATC+TGG | - | chr3.2:81279819-81279838 | None:intergenic | 40.0% |
| ! | GAGAAAGAAGCATGACAGTA+AGG | + | chr3.2:81279974-81279993 | MS.gene40969:CDS | 40.0% |
| ! | TTCTGAAGGAGGACTAAAAG+TGG | - | chr3.2:81281026-81281045 | None:intergenic | 40.0% |
| !! | CGGAATTATGGAGTATTGGT+TGG | + | chr3.2:81280320-81280339 | MS.gene40969:CDS | 40.0% |
| !! | TATGGAGTATTGGTTGGAGA+GGG | + | chr3.2:81280326-81280345 | MS.gene40969:CDS | 40.0% |
| !! | TTATGGAGTATTGGTTGGAG+AGG | + | chr3.2:81280325-81280344 | MS.gene40969:CDS | 40.0% |
| AGAATCAGCATCCTGACAAG+GGG | - | chr3.2:81280433-81280452 | None:intergenic | 45.0% | |
| AGATGTGCGTGCATGTTTGA+GGG | - | chr3.2:81281255-81281274 | None:intergenic | 45.0% | |
| AGCTGATCTTAGTACAGGTC+GGG | - | chr3.2:81280190-81280209 | None:intergenic | 45.0% | |
| AGTATGGTGAGTTCGCGATA+TGG | + | chr3.2:81280927-81280946 | MS.gene40969:CDS | 45.0% | |
| CAACCGCCTAACTGAAATCA+TGG | + | chr3.2:81280768-81280787 | MS.gene40969:CDS | 45.0% | |
| CACTAACCCAGACAATACTC+AGG | + | chr3.2:81281069-81281088 | MS.gene40969:CDS | 45.0% | |
| CAGCTGATCTTAGTACAGGT+CGG | - | chr3.2:81280191-81280210 | None:intergenic | 45.0% | |
| CATCGTCAACAGGCATTCAT+TGG | + | chr3.2:81279696-81279715 | MS.gene40969:CDS | 45.0% | |
| CCAGACAATACTCAGGATGA+CGG | + | chr3.2:81281076-81281095 | MS.gene40969:CDS | 45.0% | |
| CGCGATATGGAAAACTGAAG+TGG | + | chr3.2:81280940-81280959 | MS.gene40969:CDS | 45.0% | |
| CTAAAAGTGGTGCACTCTCT+TGG | - | chr3.2:81281013-81281032 | None:intergenic | 45.0% | |
| CTTAGTACAGGTCGGGTTAT+TGG | - | chr3.2:81280183-81280202 | None:intergenic | 45.0% | |
| GAAGAATCAGCATCCTGACA+AGG | - | chr3.2:81280435-81280454 | None:intergenic | 45.0% | |
| GAAGCTTAGAGAGGTGAAAG+AGG | + | chr3.2:81279884-81279903 | MS.gene40969:CDS | 45.0% | |
| GATACCACCATCCACTGTTA+GGG | + | chr3.2:81280398-81280417 | MS.gene40969:CDS | 45.0% | |
| GCCTTATGGTCAGCTTATTG+AGG | + | chr3.2:81279908-81279927 | MS.gene40969:CDS | 45.0% | |
| GGTTGATCCTCTTGCATTGT+GGG | - | chr3.2:81281370-81281389 | None:intergenic | 45.0% | |
| GTCAACAGGCATTCATTGGT+TGG | + | chr3.2:81279700-81279719 | MS.gene40969:CDS | 45.0% | |
| GTCTTGTGAGAAGCTTAGAG+AGG | + | chr3.2:81279875-81279894 | MS.gene40969:CDS | 45.0% | |
| GTTCAACCCTGACGGAATTA+TGG | + | chr3.2:81280308-81280327 | MS.gene40969:CDS | 45.0% | |
| TACTAGGAAGGAAGAGGACT+CGG | + | chr3.2:81279746-81279765 | MS.gene40969:CDS | 45.0% | |
| TCAATGGCAGAAGACTTGCA+AGG | + | chr3.2:81280717-81280736 | MS.gene40969:intron | 45.0% | |
| TCACCTCTCTAAGCTGACTA+AGG | - | chr3.2:81279848-81279867 | None:intergenic | 45.0% | |
| TCAGCTGCCCGTAAATACAT+CGG | + | chr3.2:81280204-81280223 | MS.gene40969:CDS | 45.0% | |
| TGAATTGGCATGCCTGAGTA+GGG | - | chr3.2:81281166-81281185 | None:intergenic | 45.0% | |
| TGGAGGTGGAAAAACCAAGA+AGG | + | chr3.2:81281278-81281297 | MS.gene40969:intron | 45.0% | |
| ! | AGGTGAAAGAGGAGTATGCT+GGG | + | chr3.2:81279928-81279947 | MS.gene40969:CDS | 45.0% |
| ! | AGGTTGATCCTCTTGCATTG+TGG | - | chr3.2:81281371-81281390 | None:intergenic | 45.0% |
| ! | AGTGGATGGTGGTATCCAAT+AGG | - | chr3.2:81280394-81280413 | None:intergenic | 45.0% |
| ! | CGTCATCCTGAGTATTGTCT+GGG | - | chr3.2:81281078-81281097 | None:intergenic | 45.0% |
| ! | GAAGAATCTGGGGTGACATT+AGG | - | chr3.2:81281391-81281410 | None:intergenic | 45.0% |
| ! | GTGGATGGTGGTATCCAATA+GGG | - | chr3.2:81280393-81280412 | None:intergenic | 45.0% |
| ! | TGGATGGTGGTATCCAATAG+GGG | - | chr3.2:81280392-81280411 | None:intergenic | 45.0% |
| !! | ACGGATTGGCAACTTGGATA+GGG | + | chr3.2:81281095-81281114 | MS.gene40969:CDS | 45.0% |
| !! | CAATACTCAGGATGACGGAT+TGG | + | chr3.2:81281081-81281100 | MS.gene40969:CDS | 45.0% |
| !! | TCTTGGTTTTTCCACCTCCA+AGG | - | chr3.2:81281278-81281297 | None:intergenic | 45.0% |
| !!! | AATATCAAAATAATATTTTA+TGG | + | chr3.2:81280519-81280538 | MS.gene40969:intron | 5.0% |
| AAAGATGGAGCAGCAGCTGT+TGG | + | chr3.2:81281585-81281604 | MS.gene40969:CDS | 50.0% | |
| AACATGCACGCACATCTCCT+TGG | + | chr3.2:81281258-81281277 | MS.gene40969:intron | 50.0% | |
| AGGATAGATGGTCAAGCGAG+AGG | + | chr3.2:81279994-81280013 | MS.gene40969:CDS | 50.0% | |
| AGTCGGCTGAACAAAGCATG+TGG | + | chr3.2:81280121-81280140 | MS.gene40969:CDS | 50.0% | |
| CAGCCTTAGTCAGCTTAGAG+AGG | + | chr3.2:81279842-81279861 | MS.gene40969:CDS | 50.0% | |
| CGAAGATGGTTCAACCCTGA+CGG | + | chr3.2:81280300-81280319 | MS.gene40969:CDS | 50.0% | |
| CGTCAGGGTTGAACCATCTT+CGG | - | chr3.2:81280302-81280321 | None:intergenic | 50.0% | |
| CTCTAAGCTGACTAAGGCTG+AGG | - | chr3.2:81279842-81279861 | None:intergenic | 50.0% | |
| CTGAATTGGCATGCCTGAGT+AGG | - | chr3.2:81281167-81281186 | None:intergenic | 50.0% | |
| GAAGCACGTTGACCGTAAAG+TGG | + | chr3.2:81280254-81280273 | MS.gene40969:CDS | 50.0% | |
| GAGATGTGCGTGCATGTTTG+AGG | - | chr3.2:81281256-81281275 | None:intergenic | 50.0% | |
| GAGGTGAAAGAGGAGCCTTA+TGG | + | chr3.2:81279894-81279913 | MS.gene40969:CDS | 50.0% | |
| GCTGATACCCACAATGCAAG+AGG | + | chr3.2:81281360-81281379 | MS.gene40969:CDS | 50.0% | |
| GGATACCACCATCCACTGTT+AGG | + | chr3.2:81280397-81280416 | MS.gene40969:CDS | 50.0% | |
| GGTCAACGTGCTTCAGTAAG+TGG | - | chr3.2:81280248-81280267 | None:intergenic | 50.0% | |
| GTCGGCTGAACAAAGCATGT+GGG | + | chr3.2:81280122-81280141 | MS.gene40969:CDS | 50.0% | |
| TGCGTGCATGTTTGAGGGTT+TGG | - | chr3.2:81281250-81281269 | None:intergenic | 50.0% | |
| ! | CCGTCATCCTGAGTATTGTC+TGG | - | chr3.2:81281079-81281098 | None:intergenic | 50.0% |
| ! | GAGGTGAAAGAGGAGTATGC+TGG | + | chr3.2:81279927-81279946 | MS.gene40969:CDS | 50.0% |
| !! | AGGATGACGGATTGGCAACT+TGG | + | chr3.2:81281089-81281108 | MS.gene40969:CDS | 50.0% |
| !! | GACGGATTGGCAACTTGGAT+AGG | + | chr3.2:81281094-81281113 | MS.gene40969:CDS | 50.0% |
| ACCGTAAAGTGGCACCTGGA+GGG | + | chr3.2:81280265-81280284 | MS.gene40969:CDS | 55.0% | |
| ATGCACGCACATCTCCTTGG+AGG | + | chr3.2:81281261-81281280 | MS.gene40969:intron | 55.0% | |
| ATGGCCCTAACAGTGGATGG+TGG | - | chr3.2:81280405-81280424 | None:intergenic | 55.0% | |
| CGGGCAGCTGATCTTAGTAC+AGG | - | chr3.2:81280195-81280214 | None:intergenic | 55.0% | |
| GGCTGAACAAAGCATGTGGG+AGG | + | chr3.2:81280125-81280144 | MS.gene40969:CDS | 55.0% | |
| GTTGACCGTAAAGTGGCACC+TGG | + | chr3.2:81280261-81280280 | MS.gene40969:CDS | 55.0% | |
| TTGGTTGGAGAGGGCTGACT+TGG | + | chr3.2:81280335-81280354 | MS.gene40969:CDS | 55.0% | |
| ! | GGACTGATCGGTTCCGAAGA+TGG | + | chr3.2:81280286-81280305 | MS.gene40969:CDS | 55.0% |
| ! | GTGGGGTGTTCATCGTCAAC+AGG | + | chr3.2:81279686-81279705 | MS.gene40969:CDS | 55.0% |
| !! | AAGCATGTGGGAGGTGCTGA+AGG | + | chr3.2:81280134-81280153 | MS.gene40969:CDS | 55.0% |
| !! | CTGGGGTTGATGACCCCTAT+TGG | + | chr3.2:81280376-81280395 | MS.gene40969:CDS | 55.0% |
| !! | TCCCTCCAGGTGCCACTTTA+CGG | - | chr3.2:81280269-81280288 | None:intergenic | 55.0% |
| CACGCACATCTCCTTGGAGG+TGG | + | chr3.2:81281264-81281283 | MS.gene40969:intron | 60.0% | |
| CAGCATCCTGACAAGGGGCA+CGG | - | chr3.2:81280428-81280447 | None:intergenic | 60.0% | |
| CGGATGGCCCTAACAGTGGA+TGG | - | chr3.2:81280408-81280427 | None:intergenic | 60.0% | |
| GACCGTAAAGTGGCACCTGG+AGG | + | chr3.2:81280264-81280283 | MS.gene40969:CDS | 60.0% | |
| GCAGGAGCTCATTGCCCAGA+AGG | + | chr3.2:81280590-81280609 | MS.gene40969:CDS | 60.0% | |
| TGGCACCTGGAGGGACTGAT+CGG | + | chr3.2:81280274-81280293 | MS.gene40969:CDS | 60.0% | |
| ! | ATCCTGACAAGGGGCACGGA+TGG | - | chr3.2:81280424-81280443 | None:intergenic | 60.0% |
| ! | TGACTTGGATGACGTCCGCG+AGG | + | chr3.2:81280350-81280369 | MS.gene40969:CDS | 60.0% |
| !! | TGGGAGGTGCTGAAGGCAGA+GGG | + | chr3.2:81280141-81280160 | MS.gene40969:CDS | 60.0% |
| ATGACGTCCGCGAGGAGGCT+GGG | + | chr3.2:81280358-81280377 | MS.gene40969:CDS | 65.0% | |
| CATCAACCCCAGCCTCCTCG+CGG | - | chr3.2:81280368-81280387 | None:intergenic | 65.0% | |
| CGGAACCGATCAGTCCCTCC+AGG | - | chr3.2:81280282-81280301 | None:intergenic | 65.0% | |
| CTTGGATGACGTCCGCGAGG+AGG | + | chr3.2:81280353-81280372 | MS.gene40969:CDS | 65.0% | |
| GGCACGGATGGCCCTAACAG+TGG | - | chr3.2:81280412-81280431 | None:intergenic | 65.0% | |
| !! | GGAGGTGCTGAAGGCAGAGG+GGG | + | chr3.2:81280143-81280162 | MS.gene40969:CDS | 65.0% |
| !! | GGGAGGTGCTGAAGGCAGAG+GGG | + | chr3.2:81280142-81280161 | MS.gene40969:CDS | 65.0% |
| !! | GTGGGAGGTGCTGAAGGCAG+AGG | + | chr3.2:81280140-81280159 | MS.gene40969:CDS | 65.0% |
| GATGACGTCCGCGAGGAGGC+TGG | + | chr3.2:81280357-81280376 | MS.gene40969:CDS | 70.0% | |
| GGCCATCCGTGCCCCTTGTC+AGG | + | chr3.2:81280419-81280438 | MS.gene40969:CDS | 70.0% | |
| TGACGTCCGCGAGGAGGCTG+GGG | + | chr3.2:81280359-81280378 | MS.gene40969:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 81279678 | 81281648 | 81279678 | ID=MS.gene40969 |
| chr3.2 | mRNA | 81279678 | 81281648 | 81279678 | ID=MS.gene40969.t1;Parent=MS.gene40969 |
| chr3.2 | exon | 81279678 | 81280015 | 81279678 | ID=MS.gene40969.t1.exon1;Parent=MS.gene40969.t1 |
| chr3.2 | CDS | 81279678 | 81280015 | 81279678 | ID=cds.MS.gene40969.t1;Parent=MS.gene40969.t1 |
| chr3.2 | exon | 81280116 | 81280499 | 81280116 | ID=MS.gene40969.t1.exon2;Parent=MS.gene40969.t1 |
| chr3.2 | CDS | 81280116 | 81280499 | 81280116 | ID=cds.MS.gene40969.t1;Parent=MS.gene40969.t1 |
| chr3.2 | exon | 81280584 | 81280641 | 81280584 | ID=MS.gene40969.t1.exon3;Parent=MS.gene40969.t1 |
| chr3.2 | CDS | 81280584 | 81280641 | 81280584 | ID=cds.MS.gene40969.t1;Parent=MS.gene40969.t1 |
| chr3.2 | exon | 81280727 | 81280810 | 81280727 | ID=MS.gene40969.t1.exon4;Parent=MS.gene40969.t1 |
| chr3.2 | CDS | 81280727 | 81280810 | 81280727 | ID=cds.MS.gene40969.t1;Parent=MS.gene40969.t1 |
| chr3.2 | exon | 81280923 | 81281218 | 81280923 | ID=MS.gene40969.t1.exon5;Parent=MS.gene40969.t1 |
| chr3.2 | CDS | 81280923 | 81281218 | 81280923 | ID=cds.MS.gene40969.t1;Parent=MS.gene40969.t1 |
| chr3.2 | exon | 81281348 | 81281462 | 81281348 | ID=MS.gene40969.t1.exon6;Parent=MS.gene40969.t1 |
| chr3.2 | CDS | 81281348 | 81281462 | 81281348 | ID=cds.MS.gene40969.t1;Parent=MS.gene40969.t1 |
| chr3.2 | exon | 81281553 | 81281648 | 81281553 | ID=MS.gene40969.t1.exon7;Parent=MS.gene40969.t1 |
| chr3.2 | CDS | 81281553 | 81281648 | 81281553 | ID=cds.MS.gene40969.t1;Parent=MS.gene40969.t1 |
| Gene Sequence |
| Protein sequence |
