Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055310.t1 | XP_013461634.1 | 75.6 | 193 | 8 | 3 | 44 | 197 | 106 | 298 | 2.40E-71 | 278.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055310.t1 | Q9FGN8 | 54.3 | 105 | 38 | 1 | 45 | 139 | 294 | 398 | 5.6e-24 | 112.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055310.t1 | A0A072V0W9 | 75.6 | 193 | 8 | 3 | 44 | 197 | 106 | 298 | 1.8e-71 | 278.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene055310 | 0.829868 | 4.05E-55 | -1.69E-46 |
| MS.gene049159 | MS.gene055310 | 0.833844 | 4.22E-56 | -1.69E-46 |
| MS.gene053008 | MS.gene055310 | 0.806573 | 7.71E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene055311 | 0.814908 | 1.21E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene055313 | 0.831499 | 1.61E-55 | -1.69E-46 |
| MS.gene055310 | MS.gene055513 | 0.819243 | 1.29E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene055926 | 0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene059283 | 0.823662 | 1.23E-53 | -1.69E-46 |
| MS.gene055310 | MS.gene060802 | 0.809006 | 2.34E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene060998 | 0.800684 | 1.28E-48 | -1.69E-46 |
| MS.gene055310 | MS.gene06133 | 0.820285 | 7.44E-53 | -1.69E-46 |
| MS.gene055310 | MS.gene062885 | 0.805462 | 1.32E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene06303 | 0.816572 | 5.16E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene063149 | 0.801411 | 9.12E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene06322 | 0.809842 | 1.55E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene06324 | 0.832715 | 8.07E-56 | -1.69E-46 |
| MS.gene055310 | MS.gene064353 | 0.801618 | 8.27E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene065666 | 0.803695 | 3.08E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene066320 | 0.802906 | 4.49E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene066321 | 0.815038 | 1.13E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene066436 | 0.806692 | 7.27E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene06740 | 0.81139 | 7.17E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene068388 | 0.800968 | 1.12E-48 | -1.69E-46 |
| MS.gene055310 | MS.gene069519 | 0.812105 | 5.01E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene06958 | 0.810857 | 9.35E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene06993 | 0.807657 | 4.54E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene072116 | 0.810348 | 1.21E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene072632 | 0.806692 | 7.27E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene073132 | 0.834491 | 2.91E-56 | -1.69E-46 |
| MS.gene055310 | MS.gene073753 | 0.803515 | 3.36E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene074604 | 0.804189 | 2.43E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene07510 | 0.823302 | 1.49E-53 | -1.69E-46 |
| MS.gene055310 | MS.gene07532 | 0.806835 | 6.78E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene08131 | 0.817105 | 3.92E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene21058 | 0.805501 | 1.29E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene22091 | 0.808702 | 2.72E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene23963 | 0.810224 | 1.28E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene28488 | 0.820901 | 5.37E-53 | -1.69E-46 |
| MS.gene055310 | MS.gene28986 | 0.814183 | 1.75E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene33135 | 0.822067 | 2.89E-53 | -1.69E-46 |
| MS.gene055310 | MS.gene35323 | 0.807602 | 4.67E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene35525 | 0.804856 | 1.77E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene35808 | 0.828999 | 6.58E-55 | -1.69E-46 |
| MS.gene055310 | MS.gene37876 | 0.801346 | 9.40E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene39314 | 0.80514 | 1.54E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene39529 | 0.819605 | 1.06E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene40969 | 0.831237 | 1.87E-55 | -1.69E-46 |
| MS.gene055310 | MS.gene41678 | 0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene41757 | 0.803379 | 3.59E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene43202 | 0.803604 | 3.22E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene44434 | 0.80465 | 1.95E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene44795 | 0.807807 | 4.22E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene45613 | 0.829064 | 6.35E-55 | -1.69E-46 |
| MS.gene055310 | MS.gene45624 | 0.826743 | 2.29E-54 | -1.69E-46 |
| MS.gene055310 | MS.gene45761 | 0.807267 | 5.49E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene47581 | 0.826772 | 2.26E-54 | -1.69E-46 |
| MS.gene055310 | MS.gene47603 | 0.803193 | 3.92E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene47822 | 0.805783 | 1.13E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene51788 | 0.827724 | 1.34E-54 | -1.69E-46 |
| MS.gene055310 | MS.gene51789 | 0.824676 | 7.10E-54 | -1.69E-46 |
| MS.gene055310 | MS.gene51818 | 0.821406 | 4.11E-53 | -1.69E-46 |
| MS.gene055310 | MS.gene52437 | 0.803129 | 4.04E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene53321 | 0.804134 | 2.50E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene54158 | 0.801493 | 8.77E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene54239 | 0.803359 | 3.62E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene54280 | 0.820659 | 6.10E-53 | -1.69E-46 |
| MS.gene055310 | MS.gene54904 | 0.813309 | 2.73E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene58134 | 0.812112 | 4.99E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene58763 | 0.802856 | 4.60E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene60163 | 0.83234 | 1.00E-55 | -1.69E-46 |
| MS.gene055310 | MS.gene60171 | 0.824911 | 6.24E-54 | -1.69E-46 |
| MS.gene055310 | MS.gene61428 | 0.815891 | 7.33E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene62393 | 0.800644 | 1.31E-48 | -1.69E-46 |
| MS.gene055310 | MS.gene65172 | 0.81423 | 1.71E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene65300 | 0.808204 | 3.47E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene67553 | 0.803593 | 3.24E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene68204 | 0.800451 | 1.43E-48 | -1.69E-46 |
| MS.gene055310 | MS.gene68264 | 0.809313 | 2.01E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene68342 | 0.800393 | 1.47E-48 | -1.69E-46 |
| MS.gene055310 | MS.gene70282 | 0.816071 | 6.68E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene70895 | 0.801297 | 9.62E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene72986 | 0.817989 | 2.48E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene73332 | 0.810439 | 1.15E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene75866 | 0.805006 | 1.64E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene76317 | 0.827181 | 1.80E-54 | -1.69E-46 |
| MS.gene055310 | MS.gene76344 | 0.807952 | 3.93E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene80574 | 0.805718 | 1.17E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene83056 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene055310 | MS.gene84454 | 0.810376 | 1.19E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene84840 | 0.807299 | 5.41E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene86140 | 0.819435 | 1.16E-52 | -1.69E-46 |
| MS.gene055310 | MS.gene86267 | 0.809415 | 1.91E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene86826 | 0.81069 | 1.02E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene86844 | 0.810953 | 8.92E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene89419 | 0.810024 | 1.42E-50 | -1.69E-46 |
| MS.gene055310 | MS.gene89985 | 0.800204 | 1.61E-48 | -1.69E-46 |
| MS.gene055310 | MS.gene90431 | 0.833619 | 4.80E-56 | -1.69E-46 |
| MS.gene055310 | MS.gene90525 | 0.832758 | 7.87E-56 | -1.69E-46 |
| MS.gene055310 | MS.gene92390 | 0.803005 | 4.28E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene95235 | 0.803049 | 4.20E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene95562 | 0.826583 | 2.51E-54 | -1.69E-46 |
| MS.gene055310 | MS.gene97030 | 0.811507 | 6.76E-51 | -1.69E-46 |
| MS.gene055310 | MS.gene98394 | 0.804816 | 1.80E-49 | -1.69E-46 |
| MS.gene055310 | MS.gene98990 | 0.831657 | 1.47E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATATCAAAATATATTTA+TGG | - | 24165:13176-13195 | MS.gene055310:CDS | 10.0% |
| !!! | TTTTTCCTAATAATTTTATT+TGG | - | 24165:13211-13230 | MS.gene055310:intron | 10.0% |
| !! | ATTAACTCTATATAATTACT+TGG | + | 24165:12737-12756 | None:intergenic | 15.0% |
| !!! | TGAATGCTTTAATATTTTAA+TGG | - | 24165:13307-13326 | MS.gene055310:CDS | 15.0% |
| !! | GCTATCCAAATAAAATTATT+AGG | + | 24165:13219-13238 | None:intergenic | 20.0% |
| !! | GGTATATATTCAAGATTTAA+TGG | - | 24165:13467-13486 | MS.gene055310:CDS | 20.0% |
| ! | AACTCTATATAATTACTTGG+TGG | + | 24165:12734-12753 | None:intergenic | 25.0% |
| ! | GAAACTGCTTAAAATAGAAA+TGG | - | 24165:13123-13142 | MS.gene055310:CDS | 25.0% |
| ! | TGCTTTATGTTGAATTTCAA+TGG | - | 24165:13358-13377 | MS.gene055310:intron | 25.0% |
| AAGAATCCATGATTTCAGTT+AGG | + | 24165:13434-13453 | None:intergenic | 30.0% | |
| AAGTTCAGTACTTCTTCATT+TGG | + | 24165:13150-13169 | None:intergenic | 30.0% | |
| AGTTCAGTACTTCTTCATTT+GGG | + | 24165:13149-13168 | None:intergenic | 30.0% | |
| CCTGTTAATATACAGAACTA+CGG | + | 24165:13559-13578 | None:intergenic | 30.0% | |
| GAAAACTGAAAGTAACATGA+TGG | - | 24165:13274-13293 | MS.gene055310:CDS | 30.0% | |
| TAAGTCAGATATCACATAAG+TGG | + | 24165:13536-13555 | None:intergenic | 30.0% | |
| TGGAGAAATCAACAAACAAA+AGG | + | 24165:13516-13535 | None:intergenic | 30.0% | |
| ! | AGTATCACCGATGTATTTTA+CGG | + | 24165:12874-12893 | None:intergenic | 30.0% |
| ! | CGTAGTTCTGTATATTAACA+GGG | - | 24165:13557-13576 | MS.gene055310:CDS | 30.0% |
| ! | TTCAGTTTTCTTTTCCTTCT+GGG | + | 24165:13264-13283 | None:intergenic | 30.0% |
| ! | TTTCAGTTTTCTTTTCCTTC+TGG | + | 24165:13265-13284 | None:intergenic | 30.0% |
| AACTGAAAGTAACATGATGG+AGG | - | 24165:13277-13296 | MS.gene055310:CDS | 35.0% | |
| AATACTCCATAATTCCGTCA+GGG | + | 24165:12977-12996 | None:intergenic | 35.0% | |
| AATCCATGATTTCAGTTAGG+CGG | + | 24165:13431-13450 | None:intergenic | 35.0% | |
| ACTCTAATGTAGGTACAAGT+CGG | - | 24165:12763-12782 | MS.gene055310:intron | 35.0% | |
| GTAAAATACATCGGTGATAC+TGG | - | 24165:12873-12892 | MS.gene055310:CDS | 35.0% | |
| GTATATTAACAGGGCAAGTA+TGG | - | 24165:13566-13585 | MS.gene055310:CDS | 35.0% | |
| TAATCATGCCACTCTAATGT+AGG | - | 24165:12753-12772 | MS.gene055310:intron | 35.0% | |
| ! | CCGTAGTTCTGTATATTAAC+AGG | - | 24165:13556-13575 | MS.gene055310:CDS | 35.0% |
| ! | GGATTCTTTGAAGAATTTGC+AGG | - | 24165:13446-13465 | MS.gene055310:intron | 35.0% |
| ! | GTATCACCGATGTATTTTAC+GGG | + | 24165:12873-12892 | None:intergenic | 35.0% |
| AAGAATCAGCATCCTGACAA+GGG | + | 24165:13093-13112 | None:intergenic | 40.0% | |
| ACCTCAATAAGCTGACCATA+AGG | + | 24165:12570-12589 | None:intergenic | 40.0% | |
| AGCATGACAGTAAGGATAGA+TGG | - | 24165:12640-12659 | MS.gene055310:intron | 40.0% | |
| AGTGGATGGTGTATCCAATA+GGG | + | 24165:13053-13072 | None:intergenic | 40.0% | |
| CAATACTCCATAATTCCGTC+AGG | + | 24165:12978-12997 | None:intergenic | 40.0% | |
| CTGACGGAATTATGGAGTAT+TGG | - | 24165:12976-12995 | MS.gene055310:intron | 40.0% | |
| CTTGCAAGGAACTTATGAAG+TGG | - | 24165:13388-13407 | MS.gene055310:intron | 40.0% | |
| GACTTGTACCTACATTAGAG+TGG | + | 24165:12764-12783 | None:intergenic | 40.0% | |
| TCAGCTTATTGAGGTGAAAG+AGG | - | 24165:12575-12594 | MS.gene055310:intron | 40.0% | |
| TCGCGATATGGAAAAACTGA+AGG | - | 24165:13594-13613 | MS.gene055310:CDS | 40.0% | |
| TTTGGATAGCAGAGATATGC+AGG | - | 24165:13229-13248 | MS.gene055310:intron | 40.0% | |
| ! | GAGAAAGAAGCATGACAGTA+AGG | - | 24165:12632-12651 | MS.gene055310:intron | 40.0% |
| !! | CGGAATTATGGAGTATTGGT+TGG | - | 24165:12980-12999 | MS.gene055310:intron | 40.0% |
| !! | TATGGAGTATTGGTTGGAGA+GGG | - | 24165:12986-13005 | MS.gene055310:intron | 40.0% |
| !! | TTATGGAGTATTGGTTGGAG+AGG | - | 24165:12985-13004 | MS.gene055310:intron | 40.0% |
| AGAATCAGCATCCTGACAAG+GGG | + | 24165:13092-13111 | None:intergenic | 45.0% | |
| AGCTGATCTTAGTACAGGTC+GGG | + | 24165:12849-12868 | None:intergenic | 45.0% | |
| AGTATGGTGAGTTCGCGATA+TGG | - | 24165:13582-13601 | MS.gene055310:CDS | 45.0% | |
| CAACCGCCTAACTGAAATCA+TGG | - | 24165:13425-13444 | MS.gene055310:intron | 45.0% | |
| CAGCTGATCTTAGTACAGGT+CGG | + | 24165:12850-12869 | None:intergenic | 45.0% | |
| CAGCTGCCCGTAAAATACAT+CGG | - | 24165:12864-12883 | MS.gene055310:CDS | 45.0% | |
| CAGTGGATGGTGTATCCAAT+AGG | + | 24165:13054-13073 | None:intergenic | 45.0% | |
| GAAGAATCAGCATCCTGACA+AGG | + | 24165:13094-13113 | None:intergenic | 45.0% | |
| GAAGCACATTGACCGTAAAG+TGG | - | 24165:12914-12933 | MS.gene055310:intron | 45.0% | |
| GAAGCTTAGAGAGGTGAAAG+AGG | - | 24165:12542-12561 | MS.gene055310:intron | 45.0% | |
| GCCTTATGGTCAGCTTATTG+AGG | - | 24165:12566-12585 | MS.gene055310:intron | 45.0% | |
| GGATACACCATCCACTGTTA+GGG | - | 24165:13057-13076 | MS.gene055310:intron | 45.0% | |
| GGTCAATGTGCTTCAGTAAG+TGG | + | 24165:12908-12927 | None:intergenic | 45.0% | |
| GTCTTGTGAGAAGCTTAGAG+AGG | - | 24165:12533-12552 | MS.gene055310:CDS | 45.0% | |
| GTGGATGGTGTATCCAATAG+GGG | + | 24165:13052-13071 | None:intergenic | 45.0% | |
| GTTCAACCCTGACGGAATTA+TGG | - | 24165:12968-12987 | MS.gene055310:intron | 45.0% | |
| TCAATGGCAGAAGACTTGCA+AGG | - | 24165:13374-13393 | MS.gene055310:intron | 45.0% | |
| TGGATACACCATCCACTGTT+AGG | - | 24165:13056-13075 | MS.gene055310:intron | 45.0% | |
| ! | AGGTGAAAGAGGAGTATGCT+GGG | - | 24165:12586-12605 | MS.gene055310:intron | 45.0% |
| !! | TTAGTACAGGTCGGGTTAGT+GGG | + | 24165:12841-12860 | None:intergenic | 45.0% |
| AGGATAGATGGTCAAGCGAG+AGG | - | 24165:12652-12671 | MS.gene055310:intron | 50.0% | |
| AGTCGGCTGAACAAAGCATG+TGG | - | 24165:12780-12799 | MS.gene055310:intron | 50.0% | |
| ATTGACCGTAAAGTGGCACC+TGG | - | 24165:12921-12940 | MS.gene055310:intron | 50.0% | |
| CGAAGATGGTTCAACCCTGA+CGG | - | 24165:12960-12979 | MS.gene055310:intron | 50.0% | |
| CGTCAGGGTTGAACCATCTT+CGG | + | 24165:12962-12981 | None:intergenic | 50.0% | |
| GAGGTGAAAGAGGAGCCTTA+TGG | - | 24165:12552-12571 | MS.gene055310:intron | 50.0% | |
| GTCGGCTGAACAAAGCATGT+GGG | - | 24165:12781-12800 | MS.gene055310:intron | 50.0% | |
| ! | CTTAGTACAGGTCGGGTTAG+TGG | + | 24165:12842-12861 | None:intergenic | 50.0% |
| ! | GAGGTGAAAGAGGAGTATGC+TGG | - | 24165:12585-12604 | MS.gene055310:intron | 50.0% |
| ACCGTAAAGTGGCACCTGGA+GGG | - | 24165:12925-12944 | MS.gene055310:intron | 55.0% | |
| CGGGCAGCTGATCTTAGTAC+AGG | + | 24165:12854-12873 | None:intergenic | 55.0% | |
| GGCTGAACAAAGCATGTGGG+AGG | - | 24165:12784-12803 | MS.gene055310:intron | 55.0% | |
| TTGGTTGGAGAGGGCTGACT+TGG | - | 24165:12995-13014 | MS.gene055310:intron | 55.0% | |
| ! | GGACTGATCGGTTCCGAAGA+TGG | - | 24165:12946-12965 | MS.gene055310:intron | 55.0% |
| !! | AAGCATGTGGGAGGTGCTGA+AGG | - | 24165:12793-12812 | MS.gene055310:intron | 55.0% |
| !! | CTGGGGTTGATGACCCCTAT+TGG | - | 24165:13036-13055 | MS.gene055310:intron | 55.0% |
| !! | TCCCTCCAGGTGCCACTTTA+CGG | + | 24165:12929-12948 | None:intergenic | 55.0% |
| CAGCATCCTGACAAGGGGCA+CGG | + | 24165:13087-13106 | None:intergenic | 60.0% | |
| CGGATGGCCCTAACAGTGGA+TGG | + | 24165:13067-13086 | None:intergenic | 60.0% | |
| GACCGTAAAGTGGCACCTGG+AGG | - | 24165:12924-12943 | MS.gene055310:intron | 60.0% | |
| GCAGGAGCTCATTGCCCAGA+AGG | - | 24165:13247-13266 | MS.gene055310:intron | 60.0% | |
| TGGCACCTGGAGGGACTGAT+CGG | - | 24165:12934-12953 | MS.gene055310:intron | 60.0% | |
| ! | ATCCTGACAAGGGGCACGGA+TGG | + | 24165:13083-13102 | None:intergenic | 60.0% |
| ! | TGACTTGGATGACGTCCGCG+AGG | - | 24165:13010-13029 | MS.gene055310:intron | 60.0% |
| !! | TGGGAGGTGCTGAAGGCAGA+GGG | - | 24165:12800-12819 | MS.gene055310:intron | 60.0% |
| ATGACGTCCGCGAGGAGGCT+GGG | - | 24165:13018-13037 | MS.gene055310:intron | 65.0% | |
| CATCAACCCCAGCCTCCTCG+CGG | + | 24165:13028-13047 | None:intergenic | 65.0% | |
| CGGAACCGATCAGTCCCTCC+AGG | + | 24165:12942-12961 | None:intergenic | 65.0% | |
| CTTGGATGACGTCCGCGAGG+AGG | - | 24165:13013-13032 | MS.gene055310:intron | 65.0% | |
| GGCACGGATGGCCCTAACAG+TGG | + | 24165:13071-13090 | None:intergenic | 65.0% | |
| !! | GGAGGTGCTGAAGGCAGAGG+GGG | - | 24165:12802-12821 | MS.gene055310:intron | 65.0% |
| !! | GGGAGGTGCTGAAGGCAGAG+GGG | - | 24165:12801-12820 | MS.gene055310:intron | 65.0% |
| !! | GTGGGAGGTGCTGAAGGCAG+AGG | - | 24165:12799-12818 | MS.gene055310:intron | 65.0% |
| GATGACGTCCGCGAGGAGGC+TGG | - | 24165:13017-13036 | MS.gene055310:intron | 70.0% | |
| GGCCATCCGTGCCCCTTGTC+AGG | - | 24165:13078-13097 | MS.gene055310:CDS | 70.0% | |
| TGACGTCCGCGAGGAGGCTG+GGG | - | 24165:13019-13038 | MS.gene055310:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 24165 | gene | 12520 | 13613 | 12520 | ID=MS.gene055310 |
| 24165 | mRNA | 12520 | 13613 | 12520 | ID=MS.gene055310.t1;Parent=MS.gene055310 |
| 24165 | exon | 13460 | 13613 | 13460 | ID=MS.gene055310.t1.exon1;Parent=MS.gene055310.t1 |
| 24165 | CDS | 13460 | 13613 | 13460 | ID=cds.MS.gene055310.t1;Parent=MS.gene055310.t1 |
| 24165 | exon | 13261 | 13358 | 13261 | ID=MS.gene055310.t1.exon2;Parent=MS.gene055310.t1 |
| 24165 | CDS | 13261 | 13358 | 13261 | ID=cds.MS.gene055310.t1;Parent=MS.gene055310.t1 |
| 24165 | exon | 13061 | 13229 | 13061 | ID=MS.gene055310.t1.exon3;Parent=MS.gene055310.t1 |
| 24165 | CDS | 13061 | 13229 | 13061 | ID=cds.MS.gene055310.t1;Parent=MS.gene055310.t1 |
| 24165 | exon | 12835 | 12892 | 12835 | ID=MS.gene055310.t1.exon4;Parent=MS.gene055310.t1 |
| 24165 | CDS | 12835 | 12892 | 12835 | ID=cds.MS.gene055310.t1;Parent=MS.gene055310.t1 |
| 24165 | exon | 12666 | 12749 | 12666 | ID=MS.gene055310.t1.exon5;Parent=MS.gene055310.t1 |
| 24165 | CDS | 12666 | 12749 | 12666 | ID=cds.MS.gene055310.t1;Parent=MS.gene055310.t1 |
| 24165 | exon | 12520 | 12555 | 12520 | ID=MS.gene055310.t1.exon6;Parent=MS.gene055310.t1 |
| 24165 | CDS | 12520 | 12555 | 12520 | ID=cds.MS.gene055310.t1;Parent=MS.gene055310.t1 |
| Gene Sequence |
| Protein sequence |
