Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42783.t1 | XP_013445304.1 | 97.6 | 412 | 10 | 0 | 1 | 412 | 1 | 412 | 1.50E-227 | 798.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42783.t1 | O64517 | 65.1 | 424 | 130 | 6 | 1 | 412 | 1 | 418 | 3.6e-150 | 532.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42783.t1 | A0A072U0M2 | 97.6 | 412 | 10 | 0 | 1 | 412 | 1 | 412 | 1.1e-227 | 798.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene42783 | 0.818598 | 1.80E-52 | -1.69E-46 |
| MS.gene049227 | MS.gene42783 | 0.802472 | 5.52E-49 | -1.69E-46 |
| MS.gene049585 | MS.gene42783 | 0.800198 | 1.61E-48 | -1.69E-46 |
| MS.gene049711 | MS.gene42783 | 0.803861 | 2.85E-49 | -1.69E-46 |
| MS.gene049807 | MS.gene42783 | 0.884169 | 2.41E-71 | -1.69E-46 |
| MS.gene049887 | MS.gene42783 | 0.806561 | 7.75E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene42783 | 0.824849 | 6.46E-54 | -1.69E-46 |
| MS.gene04998 | MS.gene42783 | 0.803025 | 4.24E-49 | -1.69E-46 |
| MS.gene050224 | MS.gene42783 | 0.832045 | 1.18E-55 | -1.69E-46 |
| MS.gene050273 | MS.gene42783 | 0.811947 | 5.43E-51 | -1.69E-46 |
| MS.gene050359 | MS.gene42783 | 0.864857 | 8.99E-65 | -1.69E-46 |
| MS.gene050414 | MS.gene42783 | 0.87476 | 5.25E-68 | -1.69E-46 |
| MS.gene050551 | MS.gene42783 | 0.809759 | 1.61E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene42783 | 0.805144 | 1.54E-49 | -1.69E-46 |
| MS.gene050562 | MS.gene42783 | 0.800513 | 1.39E-48 | -1.69E-46 |
| MS.gene050646 | MS.gene42783 | 0.880724 | 4.33E-70 | -1.69E-46 |
| MS.gene050654 | MS.gene42783 | 0.804726 | 1.88E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene42783 | 0.811308 | 7.47E-51 | -1.69E-46 |
| MS.gene051043 | MS.gene42783 | 0.804832 | 1.79E-49 | -1.69E-46 |
| MS.gene051102 | MS.gene42783 | 0.82389 | 1.09E-53 | -1.69E-46 |
| MS.gene051184 | MS.gene42783 | 0.810594 | 1.07E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene42783 | 0.829847 | 4.09E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene42783 | 0.838285 | 3.15E-57 | -1.69E-46 |
| MS.gene051381 | MS.gene42783 | 0.842203 | 2.99E-58 | -1.69E-46 |
| MS.gene051724 | MS.gene42783 | 0.830507 | 2.82E-55 | -1.69E-46 |
| MS.gene051852 | MS.gene42783 | 0.838523 | 2.73E-57 | -1.69E-46 |
| MS.gene051856 | MS.gene42783 | 0.800998 | 1.11E-48 | -1.69E-46 |
| MS.gene052016 | MS.gene42783 | 0.819482 | 1.13E-52 | -1.69E-46 |
| MS.gene052072 | MS.gene42783 | 0.82469 | 7.04E-54 | -1.69E-46 |
| MS.gene052239 | MS.gene42783 | -0.853655 | 2.07E-61 | -1.69E-46 |
| MS.gene052242 | MS.gene42783 | -0.855763 | 5.07E-62 | -1.69E-46 |
| MS.gene052307 | MS.gene42783 | 0.867899 | 9.73E-66 | -1.69E-46 |
| MS.gene052335 | MS.gene42783 | 0.840834 | 6.85E-58 | -1.69E-46 |
| MS.gene052342 | MS.gene42783 | 0.811443 | 6.98E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene42783 | 0.838737 | 2.41E-57 | -1.69E-46 |
| MS.gene052514 | MS.gene42783 | 0.839953 | 1.16E-57 | -1.69E-46 |
| MS.gene052516 | MS.gene42783 | 0.85003 | 2.21E-60 | -1.69E-46 |
| MS.gene052533 | MS.gene42783 | 0.825231 | 5.25E-54 | -1.69E-46 |
| MS.gene052609 | MS.gene42783 | 0.882949 | 6.78E-71 | -1.69E-46 |
| MS.gene052932 | MS.gene42783 | 0.819308 | 1.24E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene42783 | 0.834055 | 3.74E-56 | -1.69E-46 |
| MS.gene053143 | MS.gene42783 | 0.878485 | 2.70E-69 | -1.69E-46 |
| MS.gene053144 | MS.gene42783 | 0.813182 | 2.91E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene42783 | 0.833014 | 6.80E-56 | -1.69E-46 |
| MS.gene053581 | MS.gene42783 | 0.810991 | 8.75E-51 | -1.69E-46 |
| MS.gene053620 | MS.gene42783 | 0.813861 | 2.07E-51 | -1.69E-46 |
| MS.gene054178 | MS.gene42783 | 0.823476 | 1.36E-53 | -1.69E-46 |
| MS.gene054250 | MS.gene42783 | 0.800902 | 1.16E-48 | -1.69E-46 |
| MS.gene054584 | MS.gene42783 | 0.804386 | 2.21E-49 | -1.69E-46 |
| MS.gene054709 | MS.gene42783 | 0.838051 | 3.62E-57 | -1.69E-46 |
| MS.gene054824 | MS.gene42783 | 0.80708 | 6.02E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene42783 | 0.82288 | 1.87E-53 | -1.69E-46 |
| MS.gene054893 | MS.gene42783 | 0.823022 | 1.73E-53 | -1.69E-46 |
| MS.gene055141 | MS.gene42783 | 0.816036 | 6.80E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene42783 | 0.809543 | 1.80E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene42783 | 0.844213 | 8.69E-59 | -1.69E-46 |
| MS.gene055513 | MS.gene42783 | 0.807927 | 3.98E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene42783 | 0.820772 | 5.75E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene42783 | 0.80307 | 4.15E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene42783 | 0.808459 | 3.07E-50 | -1.69E-46 |
| MS.gene056507 | MS.gene42783 | 0.833291 | 5.80E-56 | -1.69E-46 |
| MS.gene056578 | MS.gene42783 | 0.801301 | 9.61E-49 | -1.69E-46 |
| MS.gene056677 | MS.gene42783 | 0.86444 | 1.21E-64 | -1.69E-46 |
| MS.gene056699 | MS.gene42783 | 0.828782 | 7.42E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene42783 | 0.820454 | 6.80E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene42783 | 0.833451 | 5.29E-56 | -1.69E-46 |
| MS.gene057371 | MS.gene42783 | 0.800131 | 1.66E-48 | -1.69E-46 |
| MS.gene058008 | MS.gene42783 | 0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene42783 | 0.826345 | 2.85E-54 | -1.69E-46 |
| MS.gene058054 | MS.gene42783 | 0.814579 | 1.43E-51 | -1.69E-46 |
| MS.gene058330 | MS.gene42783 | 0.821118 | 4.79E-53 | -1.69E-46 |
| MS.gene059007 | MS.gene42783 | 0.832242 | 1.06E-55 | -1.69E-46 |
| MS.gene059170 | MS.gene42783 | 0.836488 | 9.08E-57 | -1.69E-46 |
| MS.gene059965 | MS.gene42783 | 0.825992 | 3.46E-54 | -1.69E-46 |
| MS.gene060259 | MS.gene42783 | 0.819243 | 1.29E-52 | -1.69E-46 |
| MS.gene060840 | MS.gene42783 | 0.815867 | 7.42E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene42783 | 0.817817 | 2.71E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene42783 | 0.811257 | 7.67E-51 | -1.69E-46 |
| MS.gene061006 | MS.gene42783 | 0.817071 | 3.99E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene42783 | 0.865013 | 8.03E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42783.t1 | MTR_8g447080 | 97.573 | 412 | 10 | 0 | 1 | 412 | 1 | 412 | 0.0 | 831 |
| MS.gene42783.t1 | MTR_2g063570 | 65.865 | 416 | 120 | 6 | 1 | 412 | 4 | 401 | 0.0 | 539 |
| MS.gene42783.t1 | MTR_7g088035 | 53.503 | 157 | 69 | 2 | 3 | 156 | 7 | 162 | 2.17e-49 | 170 |
| MS.gene42783.t1 | MTR_7g088035 | 51.807 | 83 | 40 | 0 | 329 | 411 | 231 | 313 | 3.84e-22 | 96.7 |
| MS.gene42783.t1 | MTR_0340s0030 | 31.765 | 170 | 100 | 2 | 3 | 158 | 4 | 171 | 1.34e-23 | 99.8 |
| MS.gene42783.t1 | MTR_7g451400 | 37.333 | 150 | 87 | 4 | 3 | 146 | 74 | 222 | 5.03e-23 | 99.8 |
| MS.gene42783.t1 | MTR_2g008990 | 36.913 | 149 | 89 | 3 | 3 | 146 | 116 | 264 | 4.44e-20 | 92.0 |
| MS.gene42783.t1 | MTR_2g008990 | 36.913 | 149 | 89 | 3 | 3 | 146 | 116 | 264 | 5.33e-20 | 91.7 |
| MS.gene42783.t1 | MTR_2g008990 | 36.913 | 149 | 89 | 3 | 3 | 146 | 116 | 264 | 5.50e-20 | 91.7 |
| MS.gene42783.t1 | MTR_4g094202 | 35.526 | 152 | 89 | 4 | 2 | 146 | 100 | 249 | 1.23e-18 | 87.4 |
| MS.gene42783.t1 | MTR_2g008970 | 33.775 | 151 | 92 | 3 | 3 | 146 | 88 | 237 | 1.68e-17 | 84.0 |
| MS.gene42783.t1 | MTR_4g094210 | 34.228 | 149 | 92 | 4 | 3 | 146 | 116 | 263 | 3.43e-17 | 83.2 |
| MS.gene42783.t1 | MTR_2g008970 | 33.775 | 151 | 92 | 3 | 3 | 146 | 88 | 237 | 4.12e-17 | 82.0 |
| MS.gene42783.t1 | MTR_2g008980 | 31.788 | 151 | 95 | 5 | 3 | 146 | 110 | 259 | 9.00e-15 | 74.3 |
| MS.gene42783.t1 | MTR_2g008980 | 31.788 | 151 | 95 | 5 | 3 | 146 | 110 | 259 | 1.97e-14 | 74.7 |
| MS.gene42783.t1 | MTR_2g008980 | 31.788 | 151 | 95 | 5 | 3 | 146 | 110 | 259 | 2.22e-14 | 74.3 |
| MS.gene42783.t1 | MTR_2g008980 | 31.788 | 151 | 95 | 5 | 3 | 146 | 110 | 259 | 3.39e-14 | 73.6 |
| MS.gene42783.t1 | MTR_1g054545 | 34.545 | 110 | 66 | 2 | 3 | 106 | 16 | 125 | 1.94e-12 | 69.7 |
| MS.gene42783.t1 | MTR_2g063807 | 38.043 | 92 | 39 | 2 | 320 | 411 | 39 | 112 | 2.19e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42783.t1 | AT1G79340 | 66.274 | 424 | 125 | 6 | 1 | 412 | 1 | 418 | 0.0 | 554 |
| MS.gene42783.t1 | AT1G79330 | 65.714 | 420 | 126 | 6 | 1 | 412 | 1 | 410 | 0.0 | 551 |
| MS.gene42783.t1 | AT1G79320 | 57.246 | 414 | 129 | 6 | 1 | 412 | 1 | 368 | 6.52e-158 | 450 |
| MS.gene42783.t1 | AT1G79310 | 55.213 | 422 | 160 | 9 | 1 | 412 | 1 | 403 | 5.23e-157 | 449 |
| MS.gene42783.t1 | AT1G16420 | 41.570 | 433 | 179 | 10 | 1 | 412 | 1 | 380 | 3.40e-98 | 298 |
| MS.gene42783.t1 | AT5G04200 | 36.627 | 415 | 155 | 11 | 3 | 411 | 10 | 322 | 1.13e-73 | 233 |
| MS.gene42783.t1 | AT1G02170 | 37.584 | 149 | 87 | 4 | 3 | 146 | 80 | 227 | 3.48e-23 | 100 |
| MS.gene42783.t1 | AT4G25110 | 36.486 | 148 | 89 | 3 | 3 | 146 | 116 | 262 | 2.77e-22 | 98.6 |
| MS.gene42783.t1 | AT4G25110 | 36.242 | 149 | 89 | 4 | 3 | 146 | 116 | 263 | 2.10e-21 | 95.9 |
| MS.gene42783.t1 | AT5G64240 | 33.557 | 149 | 93 | 3 | 3 | 146 | 90 | 237 | 6.43e-18 | 85.1 |
| MS.gene42783.t1 | AT5G64240 | 33.557 | 149 | 93 | 3 | 3 | 146 | 90 | 237 | 7.26e-18 | 84.0 |
Find 117 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACTTCAGCAGAAAAC+TGG | 0.278819 | 8.2:-55361013 | MS.gene42783:CDS |
| GGATCCGGCTTTGGATTATC+AGG | 0.289069 | 8.2:-55361199 | MS.gene42783:CDS |
| ATAAGCATTAGCTGCATTTC+CGG | 0.302115 | 8.2:+55360640 | None:intergenic |
| TTCATAAACTTCTTCACTTT+AGG | 0.312797 | 8.2:+55360923 | None:intergenic |
| AGGGGATTTCATGTCCCTTC+AGG | 0.322536 | 8.2:-55361139 | MS.gene42783:CDS |
| CTGCTGTTTGTTCATTATAG+TGG | 0.327931 | 8.2:-55362082 | MS.gene42783:CDS |
| ATGAAGAAACAAATGAAGAT+AGG | 0.350793 | 8.2:-55361093 | MS.gene42783:CDS |
| ACTCGTCTTCCTGCTGAAAC+TGG | 0.361776 | 8.2:-55362052 | MS.gene42783:CDS |
| GGAAATGCAGCTAATGCTTA+TGG | 0.373990 | 8.2:-55360638 | MS.gene42783:CDS |
| GAACATTCTGGATCCGGCTT+TGG | 0.378094 | 8.2:-55361208 | MS.gene42783:CDS |
| AGGTGGACAAGGTGGGATAC+TGG | 0.379608 | 8.2:-55360864 | MS.gene42783:CDS |
| AAGGGAGAAGAGGAACATTC+TGG | 0.411416 | 8.2:-55361220 | MS.gene42783:CDS |
| TTTCTTCATCCCTGTGTGTA+TGG | 0.414592 | 8.2:+55361107 | None:intergenic |
| GTCGGAGCTGGTCAGATCTT+CGG | 0.416923 | 8.2:-55362116 | MS.gene42783:CDS |
| GACAAGCATCTGCTGAAGTC+TGG | 0.432339 | 8.2:+55360666 | None:intergenic |
| CCCACTTCCGTGTCCATGGC+AGG | 0.437318 | 8.2:+55360770 | None:intergenic |
| CACCTTCACCACCTCCATGC+TGG | 0.437332 | 8.2:+55360882 | None:intergenic |
| CAAAACAGTGATGTCATCTT+CGG | 0.443836 | 8.2:+55362195 | None:intergenic |
| AGCTTTCAGCAATGCAATAC+AGG | 0.451961 | 8.2:-55360615 | MS.gene42783:CDS |
| ATGAAATCCCCTTGACTCAA+TGG | 0.455345 | 8.2:+55361150 | None:intergenic |
| TGATGATTTCAAGGAATTTG+TGG | 0.462771 | 8.2:-55361341 | MS.gene42783:CDS |
| TCAGCAGATGCTTGTCCTGC+CGG | 0.466394 | 8.2:-55360659 | MS.gene42783:CDS |
| GATTATCAGGCTTTCTGCAT+AGG | 0.478422 | 8.2:-55361186 | MS.gene42783:CDS |
| GCCTGCCATGGACACGGAAG+TGG | 0.484409 | 8.2:-55360771 | MS.gene42783:CDS |
| CAGATAGGAGAGAGCACAAA+GGG | 0.484810 | 8.2:-55361238 | MS.gene42783:CDS |
| GTGAACAGATGATGATTTCA+AGG | 0.489198 | 8.2:-55361350 | MS.gene42783:intron |
| GAAGAGGAACATTCTGGATC+CGG | 0.491474 | 8.2:-55361214 | MS.gene42783:CDS |
| CGTCTTATGTTCTTTCCTGT+CGG | 0.492887 | 8.2:+55362145 | None:intergenic |
| TGAAGAAACAAATGAAGATA+GGG | 0.494506 | 8.2:-55361092 | MS.gene42783:CDS |
| GGTGGACAAGGTGGGATACT+GGG | 0.494635 | 8.2:-55360863 | MS.gene42783:CDS |
| AAAACATATCAGCACAAGAA+AGG | 0.502276 | 8.2:+55360464 | None:intergenic |
| ACTTCCCACTTCCGTGTCCA+TGG | 0.503655 | 8.2:+55360766 | None:intergenic |
| CTCATCAGAATCCCACCGCT+TGG | 0.506927 | 8.2:+55360704 | None:intergenic |
| TTTCAAGGAATTTGTGGATG+GGG | 0.511520 | 8.2:-55361335 | MS.gene42783:CDS |
| ACTGGAGAGGATGATGATAC+TGG | 0.514134 | 8.2:-55362034 | MS.gene42783:CDS |
| GAAGAAGCTAAGGAGCAGAT+AGG | 0.515777 | 8.2:-55361253 | MS.gene42783:CDS |
| GGTGGTGAAGGTGGACAAGG+TGG | 0.521742 | 8.2:-55360872 | MS.gene42783:CDS |
| GCGAGAAAAGCCGTATTGAT+CGG | 0.523585 | 8.2:-55362310 | MS.gene42783:CDS |
| TCCCACATGGAGTGAAGAAT+AGG | 0.524773 | 8.2:-55361060 | MS.gene42783:CDS |
| CTGCTGAAGTATATCAATGA+GGG | 0.525441 | 8.2:+55361021 | None:intergenic |
| AGAGAGAAGCTACAGAAAGA+TGG | 0.525591 | 8.2:-55360536 | MS.gene42783:CDS |
| CTCCAGCATGGAGGTGGTGA+AGG | 0.526322 | 8.2:-55360884 | MS.gene42783:CDS |
| GGGAAAGAAAATATAGATGT+TGG | 0.529307 | 8.2:-55360992 | MS.gene42783:CDS |
| ATTTCAAGGAATTTGTGGAT+GGG | 0.534026 | 8.2:-55361336 | MS.gene42783:CDS |
| CTGGTCAGATCTTCGGAGGA+TGG | 0.535257 | 8.2:-55362109 | MS.gene42783:CDS |
| GCATTAGCTGCATTTCCGGC+AGG | 0.539676 | 8.2:+55360644 | None:intergenic |
| GGAGGTGGTGAAGGTGGACA+AGG | 0.539731 | 8.2:-55360875 | MS.gene42783:CDS |
| AAATGCTTGATCGAACGTTA+CGG | 0.540516 | 8.2:-55362223 | MS.gene42783:CDS |
| AACAAGCTCCAGCATGGAGG+TGG | 0.540605 | 8.2:-55360890 | MS.gene42783:CDS |
| TGAGGATGCCATTGAGTCAA+GGG | 0.541659 | 8.2:-55361158 | MS.gene42783:CDS |
| AGTAAGCATGAAGTATATGC+TGG | 0.543669 | 8.2:-55360746 | MS.gene42783:CDS |
| TGCAATACAGGCTATAATTG+AGG | 0.544373 | 8.2:-55360603 | MS.gene42783:CDS |
| TCATCCTCTCCAGTTTCAGC+AGG | 0.549079 | 8.2:+55362043 | None:intergenic |
| GATTTCAAGGAATTTGTGGA+TGG | 0.550385 | 8.2:-55361337 | MS.gene42783:CDS |
| TCTGATATGAATCTCATCAC+TGG | 0.553185 | 8.2:-55361989 | MS.gene42783:intron |
| AAGACGTGTTCTGTCGGAGC+TGG | 0.553482 | 8.2:-55362128 | MS.gene42783:CDS |
| TTTGTTCATTATAGTGGACA+TGG | 0.555229 | 8.2:-55362076 | MS.gene42783:CDS |
| AGGTGGGATACTGGGAATGG+TGG | 0.558174 | 8.2:-55360855 | MS.gene42783:CDS |
| TCGTCGTACACGGAGCCGAC+AGG | 0.559875 | 8.2:-55362160 | MS.gene42783:CDS |
| AGAGAGCACAAAGGGAGAAG+AGG | 0.560245 | 8.2:-55361230 | MS.gene42783:CDS |
| TGATCACTGCAATAGAGTCC+TGG | 0.562515 | 8.2:+55360500 | None:intergenic |
| GTAGTTGATTCCGATCAATA+CGG | 0.563226 | 8.2:+55362300 | None:intergenic |
| ATATACTTCAGCAGAAAACT+GGG | 0.563796 | 8.2:-55361012 | MS.gene42783:CDS |
| CAGCATGGAGGTGGTGAAGG+TGG | 0.564016 | 8.2:-55360881 | MS.gene42783:CDS |
| TTGAGGATGCCATTGAGTCA+AGG | 0.570714 | 8.2:-55361159 | MS.gene42783:CDS |
| AAGCGCAGTCTTCCAAGCGG+TGG | 0.572250 | 8.2:-55360716 | MS.gene42783:CDS |
| GGTGGGATACTGGGAATGGT+GGG | 0.573761 | 8.2:-55360854 | MS.gene42783:CDS |
| TGCAAAGCCTGCCATGGACA+CGG | 0.574467 | 8.2:-55360777 | MS.gene42783:CDS |
| GATGGATTCACTCAAAAGCC+AGG | 0.574901 | 8.2:-55360518 | MS.gene42783:CDS |
| ATGGGGTTCCTAGAGGATGT+AGG | 0.576033 | 8.2:-55361318 | MS.gene42783:CDS |
| TGGCTTGATTGAAGAAGCTA+AGG | 0.577289 | 8.2:-55361263 | MS.gene42783:CDS |
| ATACTCGGAGCTTATTCTCA+AGG | 0.577748 | 8.2:-55360561 | MS.gene42783:CDS |
| GTGGTGAAGGTGGACAAGGT+GGG | 0.577935 | 8.2:-55360871 | MS.gene42783:CDS |
| AAGCTGAATGATAATGATGA+GGG | 0.577946 | 8.2:-55360803 | MS.gene42783:CDS |
| GTGATGAGATTCATATCAGA+AGG | 0.580568 | 8.2:+55361992 | None:intergenic |
| TGATGGTGCAATTACATACT+CGG | 0.584306 | 8.2:-55360576 | MS.gene42783:CDS |
| AAAGCTGAATGATAATGATG+AGG | 0.590743 | 8.2:-55360804 | MS.gene42783:CDS |
| ATGGTCAGCCTACATCCTCT+AGG | 0.591604 | 8.2:+55361310 | None:intergenic |
| ATCTTGAACAAGCTCCAGCA+TGG | 0.591703 | 8.2:-55360896 | MS.gene42783:CDS |
| GGGATATGCAAAGCCTGCCA+TGG | 0.591792 | 8.2:-55360783 | MS.gene42783:CDS |
| CTTTCTGCATAGGAAAGTTG+AGG | 0.592352 | 8.2:-55361176 | MS.gene42783:CDS |
| AAAGCCTGATAATCCAAAGC+CGG | 0.593904 | 8.2:+55361195 | None:intergenic |
| AGCGCAGTCTTCCAAGCGGT+GGG | 0.594928 | 8.2:-55360715 | MS.gene42783:CDS |
| GTATGGCGACGCAATCCTGA+AGG | 0.600495 | 8.2:+55361124 | None:intergenic |
| GACCTATTCTTCACTCCATG+TGG | 0.610109 | 8.2:+55361058 | None:intergenic |
| CCTGCCATGGACACGGAAGT+GGG | 0.612646 | 8.2:-55360770 | MS.gene42783:CDS |
| GAACATAAGACGTGTTCTGT+CGG | 0.616617 | 8.2:-55362134 | MS.gene42783:CDS |
| TTGTTCATTATAGTGGACAT+GGG | 0.616864 | 8.2:-55362075 | MS.gene42783:CDS |
| TCTGCTGAAGTATATCAATG+AGG | 0.620784 | 8.2:+55361020 | None:intergenic |
| GATGCGTAAACGACGTGTGG+AGG | 0.622173 | 8.2:-55362252 | MS.gene42783:CDS |
| AGCGGTGGGATTCTGATGAG+CGG | 0.625209 | 8.2:-55360701 | MS.gene42783:CDS |
| ATATCAATGAGGGTTGAAAG+TGG | 0.625536 | 8.2:+55361031 | None:intergenic |
| TCTGATTCATGCCACAGTGG+TGG | 0.633718 | 8.2:-55361283 | MS.gene42783:CDS |
| GATTGCGTCGCCATACACAC+AGG | 0.633924 | 8.2:-55361117 | MS.gene42783:CDS |
| TCTTCCTGCTGAAACTGGAG+AGG | 0.636836 | 8.2:-55362047 | MS.gene42783:CDS |
| TATGGCGACGCAATCCTGAA+GGG | 0.638425 | 8.2:+55361125 | None:intergenic |
| GCAGATAGGAGAGAGCACAA+AGG | 0.640959 | 8.2:-55361239 | MS.gene42783:CDS |
| GAGGATGCGTAAACGACGTG+TGG | 0.642474 | 8.2:-55362255 | MS.gene42783:CDS |
| ACCTATTCTTCACTCCATGT+GGG | 0.644192 | 8.2:+55361059 | None:intergenic |
| GTGGCATGAATCAGATACAA+TGG | 0.644776 | 8.2:+55361291 | None:intergenic |
| ATATAGATGTTGGTCAACTG+AGG | 0.645754 | 8.2:-55360982 | MS.gene42783:CDS |
| GCTATAATTGAGGAGACTGA+TGG | 0.648617 | 8.2:-55360593 | MS.gene42783:CDS |
| CGACACGGATTCGTCGTACA+CGG | 0.650792 | 8.2:-55362170 | MS.gene42783:CDS |
| GGAGCTGGTCAGATCTTCGG+AGG | 0.651252 | 8.2:-55362113 | MS.gene42783:CDS |
| TTTGTGGATGGGGTTCCTAG+AGG | 0.655242 | 8.2:-55361325 | MS.gene42783:CDS |
| GAGGATGCCATTGAGTCAAG+GGG | 0.656525 | 8.2:-55361157 | MS.gene42783:CDS |
| ATTGATCGGAATCAACTACC+CGG | 0.662029 | 8.2:-55362296 | MS.gene42783:CDS |
| AGGGATATCGAACTCCCACA+TGG | 0.666782 | 8.2:-55361073 | MS.gene42783:CDS |
| ACAAGGTGGGATACTGGGAA+TGG | 0.670102 | 8.2:-55360858 | MS.gene42783:CDS |
| TTGATCGGAATCAACTACCC+GGG | 0.674290 | 8.2:-55362295 | MS.gene42783:CDS |
| ATTGCGTCGCCATACACACA+GGG | 0.681076 | 8.2:-55361116 | MS.gene42783:CDS |
| ACAAGAAAGGATCATCAACA+TGG | 0.709272 | 8.2:+55360477 | None:intergenic |
| TTGAACAAGCTCCAGCATGG+AGG | 0.724624 | 8.2:-55360893 | MS.gene42783:CDS |
| GGAACAAAAGCAGAATTACG+AGG | 0.740123 | 8.2:-55362274 | MS.gene42783:CDS |
| CTTCAATCAAGCCACCACTG+TGG | 0.744555 | 8.2:+55361272 | None:intergenic |
| TCAAAGCGCAGTCTTCCAAG+CGG | 0.762640 | 8.2:-55360719 | MS.gene42783:CDS |
| GTATCTGATTCATGCCACAG+TGG | 0.772525 | 8.2:-55361286 | MS.gene42783:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGAGAGTAGTTTATT+TGG | + | chr8.2:55360828-55360847 | None:intergenic | 20.0% |
| !! | TCAATTAAAATTCGAACATT+TGG | + | chr8.2:55361217-55361236 | None:intergenic | 20.0% |
| !! | TTTAAAAAGTTTCTTGTAGT+TGG | + | chr8.2:55361071-55361090 | None:intergenic | 20.0% |
| !! | TTTAGTATACATGAATAGAA+AGG | - | chr8.2:55361251-55361270 | MS.gene42783:CDS | 20.0% |
| !!! | CATGTTTTATTTTGTGTTTT+TGG | - | chr8.2:55360903-55360922 | MS.gene42783:CDS | 20.0% |
| !!! | CTACACTTTTTGATATTTTT+GGG | - | chr8.2:55361827-55361846 | MS.gene42783:intron | 20.0% |
| !!! | TACACTTTTTGATATTTTTG+GGG | - | chr8.2:55361828-55361847 | MS.gene42783:intron | 20.0% |
| !!! | TACTTTAATTTGATCTTTCT+TGG | - | chr8.2:55361097-55361116 | MS.gene42783:CDS | 20.0% |
| !!! | TCTGTTTTTGTTTTGATTAA+GGG | - | chr8.2:55360863-55360882 | MS.gene42783:CDS | 20.0% |
| !!! | TTTGTGTTTTTGGATTTTTT+TGG | - | chr8.2:55360913-55360932 | MS.gene42783:CDS | 20.0% |
| ! | ATGAAGAAACAAATGAAGAT+AGG | - | chr8.2:55361692-55361711 | MS.gene42783:intron | 25.0% |
| ! | ATGTTATTAGTGAGTAGTAA+TGG | - | chr8.2:55361374-55361393 | MS.gene42783:intron | 25.0% |
| ! | TGAAGAAACAAATGAAGATA+GGG | - | chr8.2:55361693-55361712 | MS.gene42783:intron | 25.0% |
| ! | TTCATAAACTTCTTCACTTT+AGG | + | chr8.2:55361865-55361884 | None:intergenic | 25.0% |
| !! | ATGTCTGGAATCTTTATATA+GGG | - | chr8.2:55361343-55361362 | MS.gene42783:CDS | 25.0% |
| !! | CCAAAAATATCAAAAAGTGT+AGG | + | chr8.2:55361829-55361848 | None:intergenic | 25.0% |
| !!! | CCTACACTTTTTGATATTTT+TGG | - | chr8.2:55361826-55361845 | MS.gene42783:intron | 25.0% |
| !!! | CTCTGTTTTTGTTTTGATTA+AGG | - | chr8.2:55360862-55360881 | MS.gene42783:CDS | 25.0% |
| !!! | CTTGATTTGATTTGTTGATA+AGG | - | chr8.2:55361026-55361045 | MS.gene42783:CDS | 25.0% |
| ATATACTTCAGCAGAAAACT+GGG | - | chr8.2:55361773-55361792 | MS.gene42783:intron | 30.0% | |
| ATGAATAGAAAGGAACAGAA+GGG | - | chr8.2:55361261-55361280 | MS.gene42783:CDS | 30.0% | |
| ATTTCAAGGAATTTGTGGAT+GGG | - | chr8.2:55361449-55361468 | MS.gene42783:intron | 30.0% | |
| ATTTCGTGTAGAGATAGAAA+TGG | - | chr8.2:55361123-55361142 | MS.gene42783:CDS | 30.0% | |
| GGGAAAGAAAATATAGATGT+TGG | - | chr8.2:55361793-55361812 | MS.gene42783:intron | 30.0% | |
| TGATAAGGAATATCCAGATA+CGG | - | chr8.2:55361041-55361060 | MS.gene42783:CDS | 30.0% | |
| TGATGATTTCAAGGAATTTG+TGG | - | chr8.2:55361444-55361463 | MS.gene42783:intron | 30.0% | |
| ! | AAAATTCGAACATTTGGTTC+CGG | + | chr8.2:55361211-55361230 | None:intergenic | 30.0% |
| ! | AAAGCTGAATGATAATGATG+AGG | - | chr8.2:55361981-55362000 | MS.gene42783:intron | 30.0% |
| ! | AAGCTGAATGATAATGATGA+GGG | - | chr8.2:55361982-55362001 | MS.gene42783:intron | 30.0% |
| ! | CATGTCTGGAATCTTTATAT+AGG | - | chr8.2:55361342-55361361 | MS.gene42783:CDS | 30.0% |
| ! | CTTTTGCTTAAGAAACTCTT+GGG | + | chr8.2:55361965-55361984 | None:intergenic | 30.0% |
| !! | TTGTTCATTATAGTGGACAT+GGG | - | chr8.2:55360710-55360729 | MS.gene42783:CDS | 30.0% |
| !! | TTTGTTCATTATAGTGGACA+TGG | - | chr8.2:55360709-55360728 | MS.gene42783:CDS | 30.0% |
| AAATGCTTGATCGAACGTTA+CGG | - | chr8.2:55360562-55360581 | MS.gene42783:CDS | 35.0% | |
| ACAAGAAAGGATCATCAACA+TGG | + | chr8.2:55362311-55362330 | None:intergenic | 35.0% | |
| AGATAAGATTGTCTCCATAG+TGG | - | chr8.2:55361162-55361181 | MS.gene42783:CDS | 35.0% | |
| AGTAAGCATGAAGTATATGC+TGG | - | chr8.2:55362039-55362058 | MS.gene42783:CDS | 35.0% | |
| ATAAGCATTAGCTGCATTTC+CGG | + | chr8.2:55362148-55362167 | None:intergenic | 35.0% | |
| ATATAGATGTTGGTCAACTG+AGG | - | chr8.2:55361803-55361822 | MS.gene42783:intron | 35.0% | |
| ATATCAATGAGGGTTGAAAG+TGG | + | chr8.2:55361757-55361776 | None:intergenic | 35.0% | |
| CAAAACAGTGATGTCATCTT+CGG | + | chr8.2:55360593-55360612 | None:intergenic | 35.0% | |
| CATGAATAGAAAGGAACAGA+AGG | - | chr8.2:55361260-55361279 | MS.gene42783:CDS | 35.0% | |
| CTGCTGAAGTATATCAATGA+GGG | + | chr8.2:55361767-55361786 | None:intergenic | 35.0% | |
| GATATACTTCAGCAGAAAAC+TGG | - | chr8.2:55361772-55361791 | MS.gene42783:intron | 35.0% | |
| GATTTCAAGGAATTTGTGGA+TGG | - | chr8.2:55361448-55361467 | MS.gene42783:intron | 35.0% | |
| GTGAACAGATGATGATTTCA+AGG | - | chr8.2:55361435-55361454 | MS.gene42783:intron | 35.0% | |
| GTGATGAGATTCATATCAGA+AGG | + | chr8.2:55360796-55360815 | None:intergenic | 35.0% | |
| TCTGATATGAATCTCATCAC+TGG | - | chr8.2:55360796-55360815 | MS.gene42783:CDS | 35.0% | |
| TCTGCTGAAGTATATCAATG+AGG | + | chr8.2:55361768-55361787 | None:intergenic | 35.0% | |
| TGCAATACAGGCTATAATTG+AGG | - | chr8.2:55362182-55362201 | MS.gene42783:CDS | 35.0% | |
| TTTCAAGGAATTTGTGGATG+GGG | - | chr8.2:55361450-55361469 | MS.gene42783:intron | 35.0% | |
| ! | CTGCTGTTTGTTCATTATAG+TGG | - | chr8.2:55360703-55360722 | MS.gene42783:CDS | 35.0% |
| ! | GCTTTTGCTTAAGAAACTCT+TGG | + | chr8.2:55361966-55361985 | None:intergenic | 35.0% |
| ! | GTAGTTGATTCCGATCAATA+CGG | + | chr8.2:55360488-55360507 | None:intergenic | 35.0% |
| ! | TGATGGTGCAATTACATACT+CGG | - | chr8.2:55362209-55362228 | MS.gene42783:CDS | 35.0% |
| AAAGCCTGATAATCCAAAGC+CGG | + | chr8.2:55361593-55361612 | None:intergenic | 40.0% | |
| ACCTATTCTTCACTCCATGT+GGG | + | chr8.2:55361729-55361748 | None:intergenic | 40.0% | |
| AGAGAGAAGCTACAGAAAGA+TGG | - | chr8.2:55362249-55362268 | MS.gene42783:CDS | 40.0% | |
| AGCTTTCAGCAATGCAATAC+AGG | - | chr8.2:55362170-55362189 | MS.gene42783:CDS | 40.0% | |
| ATACTCGGAGCTTATTCTCA+AGG | - | chr8.2:55362224-55362243 | MS.gene42783:CDS | 40.0% | |
| ATGAAATCCCCTTGACTCAA+TGG | + | chr8.2:55361638-55361657 | None:intergenic | 40.0% | |
| ATTGATCGGAATCAACTACC+CGG | - | chr8.2:55360489-55360508 | MS.gene42783:CDS | 40.0% | |
| CGTCTTATGTTCTTTCCTGT+CGG | + | chr8.2:55360643-55360662 | None:intergenic | 40.0% | |
| CTTTCTGCATAGGAAAGTTG+AGG | - | chr8.2:55361609-55361628 | MS.gene42783:intron | 40.0% | |
| GAACATAAGACGTGTTCTGT+CGG | - | chr8.2:55360651-55360670 | MS.gene42783:CDS | 40.0% | |
| GATTATCAGGCTTTCTGCAT+AGG | - | chr8.2:55361599-55361618 | MS.gene42783:intron | 40.0% | |
| GATTCTGGTCAATTCCACTA+TGG | + | chr8.2:55361179-55361198 | None:intergenic | 40.0% | |
| GCTATAATTGAGGAGACTGA+TGG | - | chr8.2:55362192-55362211 | MS.gene42783:CDS | 40.0% | |
| GGAAATGCAGCTAATGCTTA+TGG | - | chr8.2:55362147-55362166 | MS.gene42783:CDS | 40.0% | |
| GGAACAAAAGCAGAATTACG+AGG | - | chr8.2:55360511-55360530 | MS.gene42783:CDS | 40.0% | |
| GTGGCATGAATCAGATACAA+TGG | + | chr8.2:55361497-55361516 | None:intergenic | 40.0% | |
| TGGCTTGATTGAAGAAGCTA+AGG | - | chr8.2:55361522-55361541 | MS.gene42783:intron | 40.0% | |
| TGGTTAATAGAGCTTTCGTC+TGG | - | chr8.2:55360933-55360952 | MS.gene42783:CDS | 40.0% | |
| TGTAGTTGGAATTCCGTATC+TGG | + | chr8.2:55361057-55361076 | None:intergenic | 40.0% | |
| TTTCTTCATCCCTGTGTGTA+TGG | + | chr8.2:55361681-55361700 | None:intergenic | 40.0% | |
| !! | CGTAATTCTGCTTTTGTTCC+CGG | + | chr8.2:55360511-55360530 | None:intergenic | 40.0% |
| !! | GTAATTCTGCTTTTGTTCCC+GGG | + | chr8.2:55360510-55360529 | None:intergenic | 40.0% |
| !!! | CATCACTGTTTTGATCGACA+CGG | - | chr8.2:55360600-55360619 | MS.gene42783:CDS | 40.0% |
| AAGGGAGAAGAGGAACATTC+TGG | - | chr8.2:55361565-55361584 | MS.gene42783:intron | 45.0% | |
| ACTGGAGAGGATGATGATAC+TGG | - | chr8.2:55360751-55360770 | MS.gene42783:CDS | 45.0% | |
| ATCTTGAACAAGCTCCAGCA+TGG | - | chr8.2:55361889-55361908 | MS.gene42783:intron | 45.0% | |
| GAAGAAGCTAAGGAGCAGAT+AGG | - | chr8.2:55361532-55361551 | MS.gene42783:intron | 45.0% | |
| GAAGAGGAACATTCTGGATC+CGG | - | chr8.2:55361571-55361590 | MS.gene42783:intron | 45.0% | |
| GACCTATTCTTCACTCCATG+TGG | + | chr8.2:55361730-55361749 | None:intergenic | 45.0% | |
| GTATCTGATTCATGCCACAG+TGG | - | chr8.2:55361499-55361518 | MS.gene42783:intron | 45.0% | |
| TCCCACATGGAGTGAAGAAT+AGG | - | chr8.2:55361725-55361744 | MS.gene42783:intron | 45.0% | |
| TGAGGATGCCATTGAGTCAA+GGG | - | chr8.2:55361627-55361646 | MS.gene42783:intron | 45.0% | |
| TGATCACTGCAATAGAGTCC+TGG | + | chr8.2:55362288-55362307 | None:intergenic | 45.0% | |
| TTGAGGATGCCATTGAGTCA+AGG | - | chr8.2:55361626-55361645 | MS.gene42783:intron | 45.0% | |
| TTGATCGGAATCAACTACCC+GGG | - | chr8.2:55360490-55360509 | MS.gene42783:CDS | 45.0% | |
| TTTGTAGTCTCGTGCATGTC+TGG | - | chr8.2:55361328-55361347 | MS.gene42783:CDS | 45.0% | |
| ! | ATTCGAACATTTGGTTCCGG+AGG | + | chr8.2:55361208-55361227 | None:intergenic | 45.0% |
| ! | CAGATAGGAGAGAGCACAAA+GGG | - | chr8.2:55361547-55361566 | MS.gene42783:intron | 45.0% |
| ! | GATGGATTCACTCAAAAGCC+AGG | - | chr8.2:55362267-55362286 | MS.gene42783:CDS | 45.0% |
| ! | GCGAGAAAAGCCGTATTGAT+CGG | - | chr8.2:55360475-55360494 | MS.gene42783:CDS | 45.0% |
| AAGGAACAGAAGGGAACGTG+TGG | - | chr8.2:55361270-55361289 | MS.gene42783:CDS | 50.0% | |
| ACAAGGTGGGATACTGGGAA+TGG | - | chr8.2:55361927-55361946 | MS.gene42783:intron | 50.0% | |
| ACTCGTCTTCCTGCTGAAAC+TGG | - | chr8.2:55360733-55360752 | MS.gene42783:CDS | 50.0% | |
| AGGGATATCGAACTCCCACA+TGG | - | chr8.2:55361712-55361731 | MS.gene42783:intron | 50.0% | |
| AGGGGATTTCATGTCCCTTC+AGG | - | chr8.2:55361646-55361665 | MS.gene42783:intron | 50.0% | |
| ATGGGGTTCCTAGAGGATGT+AGG | - | chr8.2:55361467-55361486 | MS.gene42783:intron | 50.0% | |
| ATGGTCAGCCTACATCCTCT+AGG | + | chr8.2:55361478-55361497 | None:intergenic | 50.0% | |
| ATTGCGTCGCCATACACACA+GGG | - | chr8.2:55361669-55361688 | MS.gene42783:intron | 50.0% | |
| CTTCAATCAAGCCACCACTG+TGG | + | chr8.2:55361516-55361535 | None:intergenic | 50.0% | |
| GAACATTCTGGATCCGGCTT+TGG | - | chr8.2:55361577-55361596 | MS.gene42783:intron | 50.0% | |
| GACAAGCATCTGCTGAAGTC+TGG | + | chr8.2:55362122-55362141 | None:intergenic | 50.0% | |
| GACCAGAATCTCTCAACCTC+CGG | - | chr8.2:55361189-55361208 | MS.gene42783:CDS | 50.0% | |
| GAGGATGCCATTGAGTCAAG+GGG | - | chr8.2:55361628-55361647 | MS.gene42783:intron | 50.0% | |
| TATGGCGACGCAATCCTGAA+GGG | + | chr8.2:55361663-55361682 | None:intergenic | 50.0% | |
| TCAAAGCGCAGTCTTCCAAG+CGG | - | chr8.2:55362066-55362085 | MS.gene42783:CDS | 50.0% | |
| TCATCCTCTCCAGTTTCAGC+AGG | + | chr8.2:55360745-55360764 | None:intergenic | 50.0% | |
| TCTGATTCATGCCACAGTGG+TGG | - | chr8.2:55361502-55361521 | MS.gene42783:intron | 50.0% | |
| TCTTCCTGCTGAAACTGGAG+AGG | - | chr8.2:55360738-55360757 | MS.gene42783:CDS | 50.0% | |
| TTCCGGAGGTTGAGAGATTC+TGG | + | chr8.2:55361194-55361213 | None:intergenic | 50.0% | |
| TTGAACAAGCTCCAGCATGG+AGG | - | chr8.2:55361892-55361911 | MS.gene42783:intron | 50.0% | |
| TTTGTGGATGGGGTTCCTAG+AGG | - | chr8.2:55361460-55361479 | MS.gene42783:intron | 50.0% | |
| ! | AGAGAGCACAAAGGGAGAAG+AGG | - | chr8.2:55361555-55361574 | MS.gene42783:intron | 50.0% |
| ! | GCAGATAGGAGAGAGCACAA+AGG | - | chr8.2:55361546-55361565 | MS.gene42783:intron | 50.0% |
| !! | GGATCCGGCTTTGGATTATC+AGG | - | chr8.2:55361586-55361605 | MS.gene42783:intron | 50.0% |
| AACAAGCTCCAGCATGGAGG+TGG | - | chr8.2:55361895-55361914 | MS.gene42783:intron | 55.0% | |
| AAGACGTGTTCTGTCGGAGC+TGG | - | chr8.2:55360657-55360676 | MS.gene42783:CDS | 55.0% | |
| ACTTCCCACTTCCGTGTCCA+TGG | + | chr8.2:55362022-55362041 | None:intergenic | 55.0% | |
| AGCGGTGGGATTCTGATGAG+CGG | - | chr8.2:55362084-55362103 | MS.gene42783:CDS | 55.0% | |
| AGGTGGACAAGGTGGGATAC+TGG | - | chr8.2:55361921-55361940 | MS.gene42783:intron | 55.0% | |
| AGGTGGGATACTGGGAATGG+TGG | - | chr8.2:55361930-55361949 | MS.gene42783:intron | 55.0% | |
| CGACACGGATTCGTCGTACA+CGG | - | chr8.2:55360615-55360634 | MS.gene42783:CDS | 55.0% | |
| CTCATCAGAATCCCACCGCT+TGG | + | chr8.2:55362084-55362103 | None:intergenic | 55.0% | |
| CTGGTCAGATCTTCGGAGGA+TGG | - | chr8.2:55360676-55360695 | MS.gene42783:CDS | 55.0% | |
| GAGGATGCGTAAACGACGTG+TGG | - | chr8.2:55360530-55360549 | MS.gene42783:CDS | 55.0% | |
| GATGCGTAAACGACGTGTGG+AGG | - | chr8.2:55360533-55360552 | MS.gene42783:CDS | 55.0% | |
| GATTGCGTCGCCATACACAC+AGG | - | chr8.2:55361668-55361687 | MS.gene42783:intron | 55.0% | |
| GCATTAGCTGCATTTCCGGC+AGG | + | chr8.2:55362144-55362163 | None:intergenic | 55.0% | |
| GGGATATGCAAAGCCTGCCA+TGG | - | chr8.2:55362002-55362021 | MS.gene42783:CDS | 55.0% | |
| GGTGGACAAGGTGGGATACT+GGG | - | chr8.2:55361922-55361941 | MS.gene42783:intron | 55.0% | |
| GGTGGGATACTGGGAATGGT+GGG | - | chr8.2:55361931-55361950 | MS.gene42783:intron | 55.0% | |
| GTATGGCGACGCAATCCTGA+AGG | + | chr8.2:55361664-55361683 | None:intergenic | 55.0% | |
| GTCGGAGCTGGTCAGATCTT+CGG | - | chr8.2:55360669-55360688 | MS.gene42783:CDS | 55.0% | |
| GTGGTGAAGGTGGACAAGGT+GGG | - | chr8.2:55361914-55361933 | MS.gene42783:intron | 55.0% | |
| TCAGCAGATGCTTGTCCTGC+CGG | - | chr8.2:55362126-55362145 | MS.gene42783:CDS | 55.0% | |
| TGCAAAGCCTGCCATGGACA+CGG | - | chr8.2:55362008-55362027 | MS.gene42783:CDS | 55.0% | |
| AAGCGCAGTCTTCCAAGCGG+TGG | - | chr8.2:55362069-55362088 | MS.gene42783:CDS | 60.0% | |
| AGCGCAGTCTTCCAAGCGGT+GGG | - | chr8.2:55362070-55362089 | MS.gene42783:CDS | 60.0% | |
| CACCTTCACCACCTCCATGC+TGG | + | chr8.2:55361906-55361925 | None:intergenic | 60.0% | |
| CAGCATGGAGGTGGTGAAGG+TGG | - | chr8.2:55361904-55361923 | MS.gene42783:intron | 60.0% | |
| CCTGCCATGGACACGGAAGT+GGG | - | chr8.2:55362015-55362034 | MS.gene42783:CDS | 60.0% | |
| CTCCAGCATGGAGGTGGTGA+AGG | - | chr8.2:55361901-55361920 | MS.gene42783:intron | 60.0% | |
| GGAGCTGGTCAGATCTTCGG+AGG | - | chr8.2:55360672-55360691 | MS.gene42783:CDS | 60.0% | |
| GGAGGTGGTGAAGGTGGACA+AGG | - | chr8.2:55361910-55361929 | MS.gene42783:intron | 60.0% | |
| GGTGGTGAAGGTGGACAAGG+TGG | - | chr8.2:55361913-55361932 | MS.gene42783:intron | 60.0% | |
| CCCACTTCCGTGTCCATGGC+AGG | + | chr8.2:55362018-55362037 | None:intergenic | 65.0% | |
| GCCTGCCATGGACACGGAAG+TGG | - | chr8.2:55362014-55362033 | MS.gene42783:CDS | 65.0% | |
| TCGTCGTACACGGAGCCGAC+AGG | - | chr8.2:55360625-55360644 | MS.gene42783:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 55360472 | 55362335 | 55360472 | ID=MS.gene42783 |
| chr8.2 | mRNA | 55360472 | 55362335 | 55360472 | ID=MS.gene42783.t1;Parent=MS.gene42783 |
| chr8.2 | exon | 55361990 | 55362335 | 55361990 | ID=MS.gene42783.t1.exon1;Parent=MS.gene42783.t1 |
| chr8.2 | CDS | 55361990 | 55362335 | 55361990 | ID=cds.MS.gene42783.t1;Parent=MS.gene42783.t1 |
| chr8.2 | exon | 55360472 | 55361364 | 55360472 | ID=MS.gene42783.t1.exon2;Parent=MS.gene42783.t1 |
| chr8.2 | CDS | 55360472 | 55361364 | 55360472 | ID=cds.MS.gene42783.t1;Parent=MS.gene42783.t1 |
| Gene Sequence |
| Protein sequence |
