AlfalfaGEDB | MS.gene44654

M. sativa cultivar XinJiangDaYe / MS.gene44654

KEGG: -
GO: -
PFAM: PF03634.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44654.t1	XP_013447599.1	97.2	351	10	0	1	351	1	351	6.70E-173	616.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44654.t1	Q9S7W5	63.7	124	42	1	6	129	26	146	5.6e-35	149.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44654.t1	A0A072U750	97.2	351	10	0	1	351	1	351	4.8e-173	616.7

TFs/TRs:

Gene ID	Type	Classification
MS.gene44654.t1	TF	TCP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049170	MS.gene44654	0.822991	1.76E-53	-1.69E-46
MS.gene049284	MS.gene44654	0.809557	1.78E-50	-1.69E-46
MS.gene049356	MS.gene44654	0.802515	5.41E-49	-1.69E-46
MS.gene049758	MS.gene44654	0.823332	1.47E-53	-1.69E-46
MS.gene050060	MS.gene44654	0.809652	1.70E-50	-1.69E-46
MS.gene050128	MS.gene44654	0.84375	1.16E-58	-1.69E-46
MS.gene050397	MS.gene44654	0.857884	1.20E-62	-1.69E-46
MS.gene050400	MS.gene44654	0.822474	2.32E-53	-1.69E-46
MS.gene050404	MS.gene44654	0.806599	7.61E-50	-1.69E-46
MS.gene050406	MS.gene44654	0.822422	2.39E-53	-1.69E-46
MS.gene050426	MS.gene44654	-0.849055	4.13E-60	-1.69E-46
MS.gene050464	MS.gene44654	0.849185	3.80E-60	-1.69E-46
MS.gene050529	MS.gene44654	0.860179	2.47E-63	-1.69E-46
MS.gene050623	MS.gene44654	-0.801464	8.89E-49	-1.69E-46
MS.gene050642	MS.gene44654	0.814344	1.62E-51	-1.69E-46
MS.gene050670	MS.gene44654	0.8256	4.29E-54	-1.69E-46
MS.gene050971	MS.gene44654	0.917757	3.60E-86	-1.69E-46
MS.gene05105	MS.gene44654	0.806028	1.00E-49	-1.69E-46
MS.gene051860	MS.gene44654	0.821328	4.28E-53	-1.69E-46
MS.gene051983	MS.gene44654	0.83083	2.36E-55	-1.69E-46
MS.gene052011	MS.gene44654	-0.813457	2.54E-51	-1.69E-46
MS.gene052077	MS.gene44654	0.882879	7.19E-71	-1.69E-46
MS.gene052078	MS.gene44654	0.800435	1.44E-48	-1.69E-46
MS.gene052178	MS.gene44654	0.842845	2.02E-58	-1.69E-46
MS.gene052188	MS.gene44654	0.865287	6.59E-65	-1.69E-46
MS.gene052253	MS.gene44654	0.826899	2.11E-54	-1.69E-46
MS.gene052310	MS.gene44654	0.842232	2.93E-58	-1.69E-46
MS.gene052340	MS.gene44654	0.875331	3.35E-68	-1.69E-46
MS.gene052469	MS.gene44654	0.806873	6.66E-50	-1.69E-46
MS.gene052702	MS.gene44654	-0.802072	6.67E-49	-1.69E-46
MS.gene05316	MS.gene44654	0.855993	4.35E-62	-1.69E-46
MS.gene053449	MS.gene44654	0.82064	6.16E-53	-1.69E-46
MS.gene053557	MS.gene44654	0.870389	1.51E-66	-1.69E-46
MS.gene053758	MS.gene44654	0.842334	2.76E-58	-1.69E-46
MS.gene053836	MS.gene44654	0.815393	9.46E-52	-1.69E-46
MS.gene053928	MS.gene44654	0.814183	1.75E-51	-1.69E-46
MS.gene054123	MS.gene44654	0.802395	5.73E-49	-1.69E-46
MS.gene054349	MS.gene44654	0.865553	5.43E-65	-1.69E-46
MS.gene054955	MS.gene44654	0.818048	2.40E-52	-1.69E-46
MS.gene055116	MS.gene44654	0.834907	2.28E-56	-1.69E-46
MS.gene055277	MS.gene44654	0.823966	1.04E-53	-1.69E-46
MS.gene055422	MS.gene44654	0.815481	9.04E-52	-1.69E-46
MS.gene05553	MS.gene44654	0.826262	2.99E-54	-1.69E-46
MS.gene055604	MS.gene44654	0.809161	2.17E-50	-1.69E-46
MS.gene056191	MS.gene44654	0.812784	3.56E-51	-1.69E-46
MS.gene056233	MS.gene44654	0.828787	7.40E-55	-1.69E-46
MS.gene056330	MS.gene44654	-0.807993	3.85E-50	-1.69E-46
MS.gene056511	MS.gene44654	0.81501	1.15E-51	-1.69E-46
MS.gene056609	MS.gene44654	0.807996	3.85E-50	-1.69E-46
MS.gene056612	MS.gene44654	0.817864	2.64E-52	-1.69E-46
MS.gene056659	MS.gene44654	0.831433	1.67E-55	-1.69E-46
MS.gene056719	MS.gene44654	0.811928	5.48E-51	-1.69E-46
MS.gene056899	MS.gene44654	-0.824357	8.43E-54	-1.69E-46
MS.gene056979	MS.gene44654	0.830337	3.11E-55	-1.69E-46
MS.gene05702	MS.gene44654	0.826006	3.44E-54	-1.69E-46
MS.gene057396	MS.gene44654	0.847205	1.34E-59	-1.69E-46
MS.gene057448	MS.gene44654	0.803238	3.84E-49	-1.69E-46
MS.gene057449	MS.gene44654	0.800373	1.49E-48	-1.69E-46
MS.gene057450	MS.gene44654	0.808958	2.40E-50	-1.69E-46
MS.gene057796	MS.gene44654	0.834502	2.89E-56	-1.69E-46
MS.gene057927	MS.gene44654	0.825657	4.16E-54	-1.69E-46
MS.gene058007	MS.gene44654	0.820028	8.51E-53	-1.69E-46
MS.gene058082	MS.gene44654	0.813107	3.03E-51	-1.69E-46
MS.gene05811	MS.gene44654	0.820777	5.73E-53	-1.69E-46
MS.gene058142	MS.gene44654	0.802901	4.50E-49	-1.69E-46
MS.gene058376	MS.gene44654	0.806901	6.57E-50	-1.69E-46
MS.gene058928	MS.gene44654	0.874835	4.95E-68	-1.69E-46
MS.gene05907	MS.gene44654	0.839159	1.87E-57	-1.69E-46
MS.gene059285	MS.gene44654	0.833198	6.12E-56	-1.69E-46
MS.gene059294	MS.gene44654	0.888519	5.50E-73	-1.69E-46
MS.gene059402	MS.gene44654	-0.808277	3.35E-50	-1.69E-46
MS.gene059420	MS.gene44654	0.807263	5.50E-50	-1.69E-46
MS.gene05959	MS.gene44654	0.806035	1.00E-49	-1.69E-46
MS.gene059676	MS.gene44654	0.802343	5.87E-49	-1.69E-46
MS.gene059688	MS.gene44654	0.818697	1.71E-52	-1.69E-46
MS.gene059692	MS.gene44654	0.816657	4.94E-52	-1.69E-46
MS.gene059695	MS.gene44654	0.809934	1.48E-50	-1.69E-46
MS.gene059807	MS.gene44654	0.865066	7.73E-65	-1.69E-46
MS.gene05984	MS.gene44654	0.849604	2.91E-60	-1.69E-46
MS.gene059894	MS.gene44654	0.851342	9.45E-61	-1.69E-46
MS.gene060495	MS.gene44654	0.806315	8.73E-50	-1.69E-46
MS.gene060496	MS.gene44654	0.813187	2.91E-51	-1.69E-46
MS.gene061041	MS.gene44654	0.803345	3.64E-49	-1.69E-46
MS.gene061049	MS.gene44654	0.858021	1.10E-62	-1.69E-46
MS.gene061051	MS.gene44654	-0.817928	2.56E-52	-1.69E-46
MS.gene061154	MS.gene44654	0.85072	1.42E-60	-1.69E-46
MS.gene061159	MS.gene44654	0.830804	2.39E-55	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44654.t1	MTR_7g015010	97.436	351	9	0	1	351	1	351	0.0	698
MS.gene44654.t1	MTR_6g015350	42.973	370	154	15	1	351	2	333	7.44e-63	204
MS.gene44654.t1	MTR_4g109660	62.185	119	42	2	1	118	1	117	2.79e-45	157
MS.gene44654.t1	MTR_3g026050	44.783	230	101	9	1	209	1	225	1.31e-44	157
MS.gene44654.t1	MTR_8g463380	60.526	76	30	0	51	126	48	123	2.59e-24	103
MS.gene44654.t1	MTR_4g079580	58.442	77	32	0	51	127	16	92	6.67e-24	100
MS.gene44654.t1	MTR_2g078200	61.644	73	28	0	51	123	14	86	9.70e-24	99.8
MS.gene44654.t1	MTR_2g090960	60.811	74	29	0	51	124	18	91	2.95e-23	99.0
MS.gene44654.t1	MTR_4g111935	29.856	278	155	11	18	264	90	358	1.10e-15	77.8
MS.gene44654.t1	MTR_6g017055	39.623	106	58	3	58	158	127	231	9.28e-14	72.4
MS.gene44654.t1	MTR_7g018500	50.877	57	28	0	59	115	122	178	4.65e-13	70.1
MS.gene44654.t1	MTR_1g103380	48.333	60	31	0	56	115	200	259	1.07e-11	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44654.t1	AT3G02150	75.000	100	25	0	30	129	47	146	1.54e-45	157
MS.gene44654.t1	AT3G02150	75.000	100	25	0	30	129	47	146	3.93e-45	158
MS.gene44654.t1	AT5G08070	71.717	99	24	2	25	123	4	98	2.85e-42	147
MS.gene44654.t1	AT5G08070	71.717	99	24	2	25	123	4	98	2.85e-42	147
MS.gene44654.t1	AT5G60970	83.750	80	12	1	43	122	49	127	5.71e-42	150
MS.gene44654.t1	AT1G30210	75.000	72	18	0	47	118	40	111	9.11e-30	116
MS.gene44654.t1	AT1G30210	75.000	72	18	0	47	118	40	111	9.11e-30	116
MS.gene44654.t1	AT4G18390	35.000	260	112	8	47	298	32	242	2.85e-27	110
MS.gene44654.t1	AT4G18390	35.000	260	112	8	47	298	32	242	2.85e-27	110
MS.gene44654.t1	AT1G53230	61.842	76	29	0	51	126	43	118	2.02e-25	105
MS.gene44654.t1	AT1G53230	61.842	76	29	0	51	126	43	118	2.02e-25	105
MS.gene44654.t1	AT3G15030	60.811	74	29	0	51	124	39	112	1.04e-23	101
MS.gene44654.t1	AT3G15030	60.811	74	29	0	51	124	39	112	1.04e-23	101
MS.gene44654.t1	AT3G15030	60.811	74	29	0	51	124	39	112	1.04e-23	101
MS.gene44654.t1	AT3G15030	60.811	74	29	0	51	124	39	112	1.04e-23	101
MS.gene44654.t1	AT2G31070	64.615	65	23	0	51	115	23	87	5.13e-21	93.2
MS.gene44654.t1	AT1G68800	47.761	67	35	0	49	115	104	170	5.29e-15	75.5
MS.gene44654.t1	AT1G68800	47.761	67	35	0	49	115	104	170	6.04e-15	75.5
MS.gene44654.t1	AT1G67260	42.105	76	44	0	46	121	76	151	6.22e-15	75.5
MS.gene44654.t1	AT1G67260	42.105	76	44	0	46	121	76	151	6.22e-15	75.5
MS.gene44654.t1	AT1G67260	42.105	76	44	0	46	121	76	151	6.75e-15	75.5
MS.gene44654.t1	AT3G18550	44.048	84	41	2	32	115	129	206	1.22e-13	72.0
MS.gene44654.t1	AT3G18550	44.048	84	41	2	32	115	129	206	1.36e-13	72.0
MS.gene44654.t1	AT3G18550	44.048	84	41	2	32	115	129	206	1.36e-13	72.0
MS.gene44654.t1	AT3G18550	44.048	84	41	2	32	115	129	206	1.55e-13	71.6

Find 61 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCAAATCACCCTTCATTTAT+TGG	0.099357	7.3:-83202945	MS.gene44654:CDS
TGTAACATATTGTTATTATT+TGG	0.154767	7.3:+83202972	None:intergenic
CTTCAAGTCAAAATTCTTCT+TGG	0.156785	7.3:-83203127	MS.gene44654:CDS
AGTGAACTCTTGTTCTTTAT+TGG	0.160335	7.3:+83202572	None:intergenic
AATTCTCTTGAAACTTCTTT+AGG	0.204373	7.3:+83203095	None:intergenic
GTTCCTACAGGTGGAAAATT+AGG	0.209351	7.3:+83203242	None:intergenic
CTTGATACTCTGACAATTCT+TGG	0.239929	7.3:+83203461	None:intergenic
GTACTATTCATCAAGTAATT+TGG	0.245121	7.3:+83203059	None:intergenic
TGCTGAAAATTCTTCTCAAT+TGG	0.271973	7.3:-83202865	MS.gene44654:CDS
ATTCTCTTGAAACTTCTTTA+GGG	0.288069	7.3:+83203096	None:intergenic
CCAATAAATGAAGGGTGATT+TGG	0.289695	7.3:+83202945	None:intergenic
ATTCTTGGATCTTTCAATCT+TGG	0.296306	7.3:+83203476	None:intergenic
GTCAGAGTATCAAGAGCTTT+TGG	0.318336	7.3:-83203452	MS.gene44654:CDS
TAAAGAAGTTTCAAGAGAAT+TGG	0.320601	7.3:-83203093	MS.gene44654:CDS
AATTCTTCTCAAATGATGTT+AGG	0.334825	7.3:-83202789	MS.gene44654:CDS
TCAATAGGAACAATATTCAT+TGG	0.339202	7.3:-83203160	MS.gene44654:CDS
TATGATCTTCAAGATAGGTT+AGG	0.344793	7.3:-83203341	MS.gene44654:CDS
GATTGAGAGATAGAAGAATA+AGG	0.365377	7.3:-83203391	MS.gene44654:CDS
CCAATGTTGTCTTTATCAAC+TGG	0.374206	7.3:-83202813	MS.gene44654:CDS
TGATGAACCTCTTGTTTCAA+TGG	0.375029	7.3:+83203569	None:intergenic
AACAATTGTTCAATTTCAAT+AGG	0.377158	7.3:-83203175	MS.gene44654:CDS
AACCTAGCAAAGTTGTTGAT+TGG	0.387978	7.3:-83203310	MS.gene44654:CDS
GCTGAAAATTCTTCTCAATT+GGG	0.390841	7.3:-83202864	MS.gene44654:CDS
CAACAATCCATCCTTCAGTT+TGG	0.407175	7.3:-83202628	MS.gene44654:CDS
GTAGGAACAAATTTCAACTT+TGG	0.419771	7.3:-83203227	MS.gene44654:CDS
AACTTTATGATCTTCAAGAT+AGG	0.421843	7.3:-83203346	MS.gene44654:CDS
ATGATCTTCAAGATAGGTTA+GGG	0.433727	7.3:-83203340	MS.gene44654:CDS
AGCAAAGTATGCACAATAAG+AGG	0.437085	7.3:-83203413	MS.gene44654:CDS
TTTAATAAACCAATAAATGA+AGG	0.455410	7.3:+83202936	None:intergenic
CAATAGGAACAATATTCATT+GGG	0.458388	7.3:-83203159	MS.gene44654:CDS
TTGAAATTTGTTCCTACAGG+TGG	0.465228	7.3:+83203233	None:intergenic
TTGTTGAGAGAATTAGTCAT+TGG	0.470696	7.3:+83202645	None:intergenic
AAGTTGAAATTTGTTCCTAC+AGG	0.474911	7.3:+83203230	None:intergenic
TTTGATGATAATGATGGTTG+TGG	0.483862	7.3:+83202697	None:intergenic
ACTTGGTACTAATTACCAAT+GGG	0.492610	7.3:-83202904	MS.gene44654:CDS
TTCTTCAAATGTTAATGCAA+TGG	0.492790	7.3:-83202748	MS.gene44654:CDS
TAGAAATTTGGCCAAACTGA+AGG	0.496121	7.3:+83202617	None:intergenic
TTGTTGAGTTCATTAGAAGA+TGG	0.499012	7.3:+83203200	None:intergenic
TCTTCTCAATTGGGAAACAA+TGG	0.501500	7.3:-83202855	MS.gene44654:CDS
TTATTAAATCCTATGCCACT+TGG	0.521662	7.3:-83202921	MS.gene44654:CDS
AAATGTTAATGCAATGGAGA+TGG	0.523566	7.3:-83202742	MS.gene44654:CDS
ACAGGTGGAAAATTAGGTAA+TGG	0.536982	7.3:+83203248	None:intergenic
CCAGTTGATAAAGACAACAT+TGG	0.545201	7.3:+83202813	None:intergenic
TCAACATTTGATGATAATGA+TGG	0.545561	7.3:+83202691	None:intergenic
AACCAATCAACAACTTTGCT+AGG	0.547433	7.3:+83203308	None:intergenic
TAATTAGTACCAAGTGGCAT+AGG	0.547722	7.3:+83202912	None:intergenic
GATGAAAATATTAACAAGCA+AGG	0.549563	7.3:-83203029	MS.gene44654:CDS
CACTTGGTACTAATTACCAA+TGG	0.556420	7.3:-83202905	MS.gene44654:CDS
CATTGGAAGTACCTCCCCAT+TGG	0.558728	7.3:+83202889	None:intergenic
AATTTGGCCAAACTGAAGGA+TGG	0.562622	7.3:+83202621	None:intergenic
TGGCCATTGTGATGAAGCTA+AGG	0.563573	7.3:+83203496	None:intergenic
AGGAACAATATTCATTGGGA+AGG	0.563907	7.3:-83203155	MS.gene44654:CDS
GGTGGAAAATTAGGTAATGG+TGG	0.564196	7.3:+83203251	None:intergenic
GTTGATAAAGACAACATTGG+TGG	0.570845	7.3:+83202816	None:intergenic
TCATAAAGTTGAATAGCTGT+TGG	0.592296	7.3:+83203359	None:intergenic
TTAATAAACCAATAAATGAA+GGG	0.612685	7.3:+83202937	None:intergenic
GAAGCTAAGGAGCTTGATGA+TGG	0.616225	7.3:+83203509	None:intergenic
GCTCCTTAGCTTCATCACAA+TGG	0.647279	7.3:-83203499	MS.gene44654:CDS
GGTACTAATTACCAATGGGG+AGG	0.679474	7.3:-83202900	MS.gene44654:CDS
CATTGGTAATTAGTACCAAG+TGG	0.701178	7.3:+83202906	None:intergenic
CTTGGTACTAATTACCAATG+GGG	0.737610	7.3:-83202903	MS.gene44654:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTAATAAACCAATAAATGAA+GGG	+	chr7.3:83203225-83203244	None:intergenic	15.0%
!!	TTTAATAAACCAATAAATGA+AGG	+	chr7.3:83203226-83203245	None:intergenic	15.0%
!!!	TGTAACATATTGTTATTATT+TGG	+	chr7.3:83203190-83203209	None:intergenic	15.0%
!!	AACAATTGTTCAATTTCAAT+AGG	-	chr7.3:83202984-83203003	MS.gene44654:CDS	20.0%
!	AAACGATCATGAAAAAGAAA+AGG	-	chr7.3:83202619-83202638	MS.gene44654:CDS	25.0%
!	AACTTTATGATCTTCAAGAT+AGG	-	chr7.3:83202813-83202832	MS.gene44654:CDS	25.0%
!	AATTCTCTTGAAACTTCTTT+AGG	+	chr7.3:83203067-83203086	None:intergenic	25.0%
!	AATTCTTCTCAAATGATGTT+AGG	-	chr7.3:83203370-83203389	MS.gene44654:CDS	25.0%
!	ATTCTCTTGAAACTTCTTTA+GGG	+	chr7.3:83203066-83203085	None:intergenic	25.0%
!	CAATAGGAACAATATTCATT+GGG	-	chr7.3:83203000-83203019	MS.gene44654:CDS	25.0%
!	GATGAAAATATTAACAAGCA+AGG	-	chr7.3:83203130-83203149	MS.gene44654:CDS	25.0%
!	GTACTATTCATCAAGTAATT+TGG	+	chr7.3:83203103-83203122	None:intergenic	25.0%
!	TAAAGAAGTTTCAAGAGAAT+TGG	-	chr7.3:83203066-83203085	MS.gene44654:CDS	25.0%
!	TCAATAGGAACAATATTCAT+TGG	-	chr7.3:83202999-83203018	MS.gene44654:CDS	25.0%
!	TTCTTCAAATGTTAATGCAA+TGG	-	chr7.3:83203411-83203430	MS.gene44654:CDS	25.0%
!!	TCAACATTTGATGATAATGA+TGG	+	chr7.3:83203471-83203490	None:intergenic	25.0%
	AAATGTTAATGCAATGGAGA+TGG	-	chr7.3:83203417-83203436	MS.gene44654:CDS	30.0%
	ACTTGGTACTAATTACCAAT+GGG	-	chr7.3:83203255-83203274	MS.gene44654:CDS	30.0%
	AGTGAACTCTTGTTCTTTAT+TGG	+	chr7.3:83203590-83203609	None:intergenic	30.0%
	ATGATCTTCAAGATAGGTTA+GGG	-	chr7.3:83202819-83202838	MS.gene44654:CDS	30.0%
	ATTCTTGGATCTTTCAATCT+TGG	+	chr7.3:83202686-83202705	None:intergenic	30.0%
	CTTCAAGTCAAAATTCTTCT+TGG	-	chr7.3:83203032-83203051	MS.gene44654:CDS	30.0%
	GATTGAGAGATAGAAGAATA+AGG	-	chr7.3:83202768-83202787	MS.gene44654:CDS	30.0%
	GCTGAAAATTCTTCTCAATT+GGG	-	chr7.3:83203295-83203314	MS.gene44654:CDS	30.0%
	GTAGGAACAAATTTCAACTT+TGG	-	chr7.3:83202932-83202951	MS.gene44654:CDS	30.0%
	TATGATCTTCAAGATAGGTT+AGG	-	chr7.3:83202818-83202837	MS.gene44654:CDS	30.0%
	TCATAAAGTTGAATAGCTGT+TGG	+	chr7.3:83202803-83202822	None:intergenic	30.0%
	TGCTGAAAATTCTTCTCAAT+TGG	-	chr7.3:83203294-83203313	MS.gene44654:CDS	30.0%
	TTATTAAATCCTATGCCACT+TGG	-	chr7.3:83203238-83203257	MS.gene44654:CDS	30.0%
	TTGTTGAGAGAATTAGTCAT+TGG	+	chr7.3:83203517-83203536	None:intergenic	30.0%
	TTGTTGAGTTCATTAGAAGA+TGG	+	chr7.3:83202962-83202981	None:intergenic	30.0%
	TTTGGAAAAACATTTGCAGT+AGG	+	chr7.3:83203172-83203191	None:intergenic	30.0%
!	AAGTTGAAATTTGTTCCTAC+AGG	+	chr7.3:83202932-83202951	None:intergenic	30.0%
!	AGAAGAATTTTCAGCATCAT+TGG	+	chr7.3:83203290-83203309	None:intergenic	30.0%
!	AGATTTTCCATTGAAACAAG+AGG	-	chr7.3:83202583-83202602	MS.gene44654:CDS	30.0%
!	TTTGATGATAATGATGGTTG+TGG	+	chr7.3:83203465-83203484	None:intergenic	30.0%
!!!	TCTGCTGTTTTGTAGAAATT+TGG	+	chr7.3:83203557-83203576	None:intergenic	30.0%
	AACCAATCAACAACTTTGCT+AGG	+	chr7.3:83202854-83202873	None:intergenic	35.0%
	AACCTAGCAAAGTTGTTGAT+TGG	-	chr7.3:83202849-83202868	MS.gene44654:CDS	35.0%
	ACAGGTGGAAAATTAGGTAA+TGG	+	chr7.3:83202914-83202933	None:intergenic	35.0%
	AGCAAAGTATGCACAATAAG+AGG	-	chr7.3:83202746-83202765	MS.gene44654:CDS	35.0%
	AGGAACAATATTCATTGGGA+AGG	-	chr7.3:83203004-83203023	MS.gene44654:CDS	35.0%
	CACTTGGTACTAATTACCAA+TGG	-	chr7.3:83203254-83203273	MS.gene44654:CDS	35.0%
	CCAAATCACCCTTCATTTAT+TGG	-	chr7.3:83203214-83203233	MS.gene44654:CDS	35.0%
	CCAATAAATGAAGGGTGATT+TGG	+	chr7.3:83203217-83203236	None:intergenic	35.0%
	CCAATGTTGTCTTTATCAAC+TGG	-	chr7.3:83203346-83203365	MS.gene44654:CDS	35.0%
	CTTGATACTCTGACAATTCT+TGG	+	chr7.3:83202701-83202720	None:intergenic	35.0%
	CTTGGTACTAATTACCAATG+GGG	-	chr7.3:83203256-83203275	MS.gene44654:CDS	35.0%
	TAATTAGTACCAAGTGGCAT+AGG	+	chr7.3:83203250-83203269	None:intergenic	35.0%
	TAGAAATTTGGCCAAACTGA+AGG	+	chr7.3:83203545-83203564	None:intergenic	35.0%
	TCTTCTCAATTGGGAAACAA+TGG	-	chr7.3:83203304-83203323	MS.gene44654:CDS	35.0%
!	CATTGGTAATTAGTACCAAG+TGG	+	chr7.3:83203256-83203275	None:intergenic	35.0%
!	GTTGATAAAGACAACATTGG+TGG	+	chr7.3:83203346-83203365	None:intergenic	35.0%
!	TGATGAACCTCTTGTTTCAA+TGG	+	chr7.3:83202593-83202612	None:intergenic	35.0%
!	TTACCTAATTTTCCACCTGT+AGG	-	chr7.3:83202914-83202933	MS.gene44654:CDS	35.0%
!	TTGAAATTTGTTCCTACAGG+TGG	+	chr7.3:83202929-83202948	None:intergenic	35.0%
!!	CCAGTTGATAAAGACAACAT+TGG	+	chr7.3:83203349-83203368	None:intergenic	35.0%
	AATTTGGCCAAACTGAAGGA+TGG	+	chr7.3:83203541-83203560	None:intergenic	40.0%
	CAACAATCCATCCTTCAGTT+TGG	-	chr7.3:83203531-83203550	MS.gene44654:CDS	40.0%
	GTTCCTACAGGTGGAAAATT+AGG	+	chr7.3:83202920-83202939	None:intergenic	40.0%
!	GGTGGAAAATTAGGTAATGG+TGG	+	chr7.3:83202911-83202930	None:intergenic	40.0%
!!	AGAGTATCAAGAGCTTTTGG+TGG	-	chr7.3:83202710-83202729	MS.gene44654:CDS	40.0%
!!	GTCAGAGTATCAAGAGCTTT+TGG	-	chr7.3:83202707-83202726	MS.gene44654:CDS	40.0%
	GAAGCTAAGGAGCTTGATGA+TGG	+	chr7.3:83202653-83202672	None:intergenic	45.0%
	GCTCCTTAGCTTCATCACAA+TGG	-	chr7.3:83202660-83202679	MS.gene44654:CDS	45.0%
	GGTACTAATTACCAATGGGG+AGG	-	chr7.3:83203259-83203278	MS.gene44654:CDS	45.0%
	TGGCCATTGTGATGAAGCTA+AGG	+	chr7.3:83202666-83202685	None:intergenic	45.0%
!!	CATTGGAAGTACCTCCCCAT+TGG	+	chr7.3:83203273-83203292	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.3	gene	83202563	83203618	83202563	ID=MS.gene44654
chr7.3	mRNA	83202563	83203618	83202563	ID=MS.gene44654.t1;Parent=MS.gene44654
chr7.3	exon	83202563	83203618	83202563	ID=MS.gene44654.t1.exon1;Parent=MS.gene44654.t1
chr7.3	CDS	83202563	83203618	83202563	ID=cds.MS.gene44654.t1;Parent=MS.gene44654.t1

Gene Sequence

>MS.gene44654

ATGAATAAGAATTCAAAAGAAGATTTTCCATTGAAACAAGAGGTTCATCAAAATTCAAACGATCATGAAAAAGAAAAGGCTAATTCACCATCATCAAGCTCCTTAGCTTCATCACAATGGCCAAGATTGAAAGATCCAAGAATTGTCAGAGTATCAAGAGCTTTTGGTGGAAAAGATAGACATAGCAAAGTATGCACAATAAGAGGATTGAGAGATAGAAGAATAAGGCTTTCAGTACCAACAGCTATTCAACTTTATGATCTTCAAGATAGGTTAGGGCTTAATCAACCTAGCAAAGTTGTTGATTGGTTGCTCAATGCAGCTAAACATGACATTGATCAACTTCCACCATTACCTAATTTTCCACCTGTAGGAACAAATTTCAACTTTGGTTTTCCATCTTCTAATGAACTCAACAATCAACAATTGTTCAATTTCAATAGGAACAATATTCATTGGGAAGGTTCAACTTCAAGTCAAAATTCTTCTTGGAAATCAAACCCTAAAGAAGTTTCAAGAGAATTGGTTAATGATAAACCAAATTACTTGATGAATAGTACTCAAGAAGATGAAAATATTAACAAGCAAGGAAGCAATATTGAAGTTCCTACTGCAAATGTTTTTCCAAATAATAACAATATGTTACAAAGACCAAATCACCCTTCATTTATTGGTTTATTAAATCCTATGCCACTTGGTACTAATTACCAATGGGGAGGTACTTCCAATGATGCTGAAAATTCTTCTCAATTGGGAAACAATGGCTTTATTACATCTTTGCCACCAATGTTGTCTTTATCAACTGGAAATTCTTCTCAAATGATGTTAGGAACAACACAATCATATTTTTCTTCAAATGTTAATGCAATGGAGATGGATCATCATCATCAAAGAGAAATCCACAACCATCATTATCATCAAATGTTGAGTTCATCAAGTTCTTCTCAGAATCCAATGACTAATTCTCTCAACAATCCATCCTTCAGTTTGGCCAAATTTCTACAAAACAGCAGAGAAAATTCATCCAATAAAGAACAAGAGTTCACTACAAAGTGA

Protein sequence

>MS.gene44654.t1

MNKNSKEDFPLKQEVHQNSNDHEKEKANSPSSSSLASSQWPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHDIDQLPPLPNFPPVGTNFNFGFPSSNELNNQQLFNFNRNNIHWEGSTSSQNSSWKSNPKEVSRELVNDKPNYLMNSTQEDENINKQGSNIEVPTANVFPNNNNMLQRPNHPSFIGLLNPMPLGTNYQWGGTSNDAENSSQLGNNGFITSLPPMLSLSTGNSSQMMLGTTQSYFSSNVNAMEMDHHHQREIHNHHYHQMLSSSSSSQNPMTNSLNNPSFSLAKFLQNSRENSSNKEQEFTTK