Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51810.t1 | XP_013459054.1 | 93.2 | 483 | 12 | 2 | 1 | 462 | 1 | 483 | 2.40E-263 | 917.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51810.t1 | Q8VYG3 | 67.1 | 462 | 130 | 3 | 21 | 460 | 24 | 485 | 1.8e-182 | 640.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51810.t1 | A0A072UTZ1 | 93.2 | 483 | 12 | 2 | 1 | 462 | 1 | 483 | 1.7e-263 | 917.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51810.t1 | MTR_3g023740 | 93.168 | 483 | 12 | 2 | 1 | 462 | 1 | 483 | 0.0 | 929 |
MS.gene51810.t1 | MTR_3g105230 | 84.435 | 469 | 52 | 2 | 1 | 448 | 1 | 469 | 0.0 | 840 |
MS.gene51810.t1 | MTR_5g009970 | 47.137 | 454 | 216 | 6 | 29 | 458 | 40 | 493 | 4.47e-144 | 421 |
MS.gene51810.t1 | MTR_5g010000 | 46.476 | 454 | 219 | 5 | 29 | 458 | 39 | 492 | 1.15e-138 | 408 |
MS.gene51810.t1 | MTR_5g085730 | 42.084 | 499 | 251 | 8 | 1 | 461 | 1 | 499 | 1.67e-131 | 390 |
MS.gene51810.t1 | MTR_5g093590 | 43.524 | 471 | 228 | 5 | 29 | 461 | 33 | 503 | 1.57e-129 | 384 |
MS.gene51810.t1 | MTR_3g080190 | 43.096 | 478 | 235 | 6 | 22 | 462 | 32 | 509 | 2.21e-129 | 385 |
MS.gene51810.t1 | MTR_8g099410 | 43.710 | 469 | 227 | 7 | 27 | 459 | 25 | 492 | 5.58e-128 | 381 |
MS.gene51810.t1 | MTR_3g080810 | 43.478 | 460 | 224 | 7 | 30 | 456 | 35 | 491 | 3.80e-127 | 378 |
MS.gene51810.t1 | MTR_8g104820 | 43.506 | 462 | 223 | 10 | 30 | 456 | 30 | 488 | 1.02e-126 | 377 |
MS.gene51810.t1 | MTR_8g099410 | 43.710 | 469 | 227 | 7 | 27 | 459 | 25 | 492 | 1.76e-126 | 381 |
MS.gene51810.t1 | MTR_3g117500 | 43.384 | 461 | 225 | 8 | 30 | 456 | 24 | 482 | 4.56e-124 | 370 |
MS.gene51810.t1 | MTR_5g009970 | 45.652 | 414 | 201 | 6 | 69 | 458 | 6 | 419 | 2.38e-122 | 363 |
MS.gene51810.t1 | MTR_4g035955 | 42.795 | 458 | 226 | 6 | 29 | 456 | 13 | 464 | 5.18e-119 | 356 |
MS.gene51810.t1 | MTR_3g010330 | 42.672 | 464 | 235 | 6 | 25 | 459 | 20 | 481 | 4.02e-118 | 355 |
MS.gene51810.t1 | MTR_4g074960 | 41.578 | 469 | 236 | 8 | 29 | 460 | 27 | 494 | 8.49e-117 | 355 |
MS.gene51810.t1 | MTR_4g035930 | 40.529 | 454 | 242 | 4 | 29 | 456 | 14 | 465 | 2.62e-114 | 344 |
MS.gene51810.t1 | MTR_4g035975 | 42.004 | 469 | 230 | 12 | 30 | 460 | 27 | 491 | 3.22e-113 | 342 |
MS.gene51810.t1 | MTR_1g088190 | 42.117 | 463 | 213 | 9 | 30 | 459 | 39 | 479 | 1.58e-110 | 335 |
MS.gene51810.t1 | MTR_5g009970 | 44.133 | 392 | 195 | 6 | 91 | 458 | 1 | 392 | 3.51e-110 | 331 |
MS.gene51810.t1 | MTR_1g037340 | 41.739 | 460 | 236 | 6 | 30 | 459 | 25 | 482 | 7.38e-110 | 333 |
MS.gene51810.t1 | MTR_3g113720 | 38.462 | 468 | 245 | 9 | 31 | 460 | 58 | 520 | 4.05e-104 | 320 |
MS.gene51810.t1 | MTR_8g075990 | 37.607 | 468 | 249 | 9 | 31 | 460 | 64 | 526 | 3.53e-92 | 289 |
MS.gene51810.t1 | MTR_5g009970 | 45.062 | 324 | 165 | 4 | 148 | 458 | 1 | 324 | 1.19e-88 | 274 |
MS.gene51810.t1 | MTR_2g028480 | 36.456 | 491 | 241 | 13 | 30 | 461 | 111 | 589 | 1.73e-83 | 269 |
MS.gene51810.t1 | MTR_3g090540 | 32.308 | 520 | 274 | 14 | 8 | 461 | 76 | 583 | 6.65e-78 | 254 |
MS.gene51810.t1 | MTR_3g082440 | 35.845 | 491 | 241 | 17 | 30 | 461 | 116 | 591 | 3.53e-75 | 248 |
MS.gene51810.t1 | MTR_1g088190 | 41.118 | 304 | 126 | 7 | 30 | 301 | 39 | 321 | 3.64e-60 | 200 |
MS.gene51810.t1 | MTR_1g111340 | 51.515 | 165 | 36 | 3 | 236 | 390 | 1 | 131 | 9.77e-42 | 145 |
MS.gene51810.t1 | MTR_7g108925 | 43.709 | 151 | 83 | 2 | 310 | 459 | 50 | 199 | 4.24e-36 | 133 |
MS.gene51810.t1 | MTR_4g128810 | 26.056 | 426 | 202 | 14 | 43 | 461 | 14 | 333 | 1.40e-30 | 122 |
MS.gene51810.t1 | MTR_1g037320 | 39.583 | 192 | 100 | 3 | 91 | 267 | 1 | 191 | 1.81e-27 | 111 |
MS.gene51810.t1 | MTR_1g037320 | 42.623 | 122 | 68 | 2 | 336 | 456 | 169 | 289 | 4.08e-24 | 102 |
MS.gene51810.t1 | MTR_0393s0050 | 44.186 | 129 | 71 | 1 | 310 | 437 | 27 | 155 | 5.17e-26 | 104 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene51810.t1 | AT3G43860 | 65.966 | 476 | 138 | 4 | 9 | 460 | 10 | 485 | 0.0 | 631 |
MS.gene51810.t1 | AT3G43860 | 65.966 | 476 | 138 | 4 | 9 | 460 | 10 | 485 | 0.0 | 631 |
MS.gene51810.t1 | AT4G23560 | 46.916 | 454 | 216 | 6 | 31 | 460 | 24 | 476 | 2.08e-133 | 394 |
MS.gene51810.t1 | AT4G09740 | 46.491 | 456 | 219 | 6 | 29 | 460 | 22 | 476 | 2.42e-132 | 391 |
MS.gene51810.t1 | AT4G11050 | 44.968 | 467 | 220 | 7 | 30 | 460 | 26 | 491 | 3.16e-131 | 390 |
MS.gene51810.t1 | AT4G11050 | 44.968 | 467 | 220 | 7 | 30 | 460 | 26 | 491 | 1.65e-130 | 391 |
MS.gene51810.t1 | AT4G11050 | 44.968 | 467 | 220 | 7 | 30 | 460 | 26 | 491 | 1.68e-130 | 391 |
MS.gene51810.t1 | AT4G02290 | 44.372 | 462 | 222 | 7 | 30 | 459 | 52 | 510 | 1.08e-127 | 380 |
MS.gene51810.t1 | AT1G64390 | 44.111 | 467 | 224 | 7 | 30 | 460 | 25 | 490 | 1.16e-126 | 381 |
MS.gene51810.t1 | AT2G32990 | 43.376 | 468 | 228 | 6 | 27 | 457 | 36 | 503 | 5.05e-126 | 376 |
MS.gene51810.t1 | AT1G70710 | 42.888 | 464 | 228 | 9 | 30 | 460 | 28 | 487 | 3.41e-123 | 368 |
MS.gene51810.t1 | AT1G02800 | 44.372 | 462 | 220 | 8 | 30 | 459 | 43 | 499 | 6.72e-123 | 367 |
MS.gene51810.t1 | AT1G23210 | 42.026 | 464 | 232 | 9 | 30 | 460 | 28 | 487 | 3.27e-120 | 360 |
MS.gene51810.t1 | AT1G71380 | 43.043 | 460 | 230 | 8 | 30 | 460 | 24 | 480 | 3.94e-118 | 355 |
MS.gene51810.t1 | AT1G22880 | 42.826 | 460 | 231 | 8 | 30 | 460 | 24 | 480 | 8.23e-118 | 354 |
MS.gene51810.t1 | AT4G39010 | 40.466 | 472 | 244 | 9 | 24 | 460 | 23 | 492 | 1.30e-115 | 348 |
MS.gene51810.t1 | AT2G44550 | 41.138 | 457 | 237 | 7 | 30 | 456 | 33 | 487 | 1.59e-110 | 335 |
MS.gene51810.t1 | AT1G19940 | 41.703 | 458 | 228 | 9 | 30 | 453 | 48 | 500 | 5.43e-110 | 335 |
MS.gene51810.t1 | AT1G19940 | 41.703 | 458 | 228 | 9 | 30 | 453 | 48 | 500 | 5.43e-110 | 335 |
MS.gene51810.t1 | AT2G44540 | 40.870 | 460 | 239 | 7 | 30 | 458 | 33 | 490 | 3.36e-109 | 332 |
MS.gene51810.t1 | AT2G44570 | 41.328 | 467 | 240 | 8 | 25 | 459 | 28 | 492 | 4.23e-108 | 329 |
MS.gene51810.t1 | AT2G44560 | 39.592 | 490 | 261 | 8 | 1 | 459 | 6 | 491 | 1.13e-107 | 328 |
MS.gene51810.t1 | AT1G48930 | 41.075 | 465 | 237 | 7 | 29 | 457 | 29 | 492 | 1.40e-107 | 332 |
MS.gene51810.t1 | AT4G39000 | 38.280 | 465 | 252 | 5 | 30 | 460 | 25 | 488 | 1.72e-104 | 320 |
MS.gene51810.t1 | AT1G75680 | 41.228 | 456 | 223 | 10 | 31 | 449 | 58 | 505 | 1.02e-102 | 317 |
MS.gene51810.t1 | AT4G38990 | 38.593 | 469 | 242 | 10 | 30 | 456 | 23 | 487 | 2.63e-100 | 309 |
MS.gene51810.t1 | AT4G02290 | 41.397 | 401 | 200 | 7 | 91 | 459 | 1 | 398 | 9.99e-95 | 292 |
MS.gene51810.t1 | AT1G22880 | 40.351 | 399 | 206 | 8 | 91 | 460 | 1 | 396 | 1.21e-90 | 281 |
MS.gene51810.t1 | AT4G39010 | 38.587 | 368 | 191 | 7 | 24 | 357 | 23 | 389 | 4.51e-86 | 269 |
MS.gene51810.t1 | AT5G49720 | 36.049 | 491 | 243 | 15 | 30 | 461 | 108 | 586 | 2.44e-81 | 264 |
MS.gene51810.t1 | AT1G19940 | 39.612 | 361 | 183 | 7 | 30 | 356 | 48 | 407 | 9.44e-76 | 243 |
MS.gene51810.t1 | AT4G24260 | 35.772 | 492 | 243 | 15 | 30 | 461 | 108 | 586 | 6.99e-74 | 244 |
MS.gene51810.t1 | AT1G65610 | 35.992 | 489 | 242 | 17 | 30 | 461 | 116 | 590 | 8.53e-74 | 244 |
MS.gene51810.t1 | AT2G44570 | 39.945 | 363 | 185 | 7 | 25 | 356 | 28 | 388 | 1.85e-73 | 237 |
MS.gene51810.t1 | AT1G22880 | 44.000 | 300 | 138 | 6 | 30 | 301 | 24 | 321 | 1.81e-70 | 227 |
MS.gene51810.t1 | AT4G38990 | 36.336 | 333 | 166 | 6 | 30 | 335 | 23 | 336 | 2.91e-59 | 198 |
MS.gene51810.t1 | AT4G24260 | 32.817 | 387 | 194 | 12 | 30 | 356 | 108 | 488 | 4.06e-43 | 159 |
MS.gene51810.t1 | AT4G24260 | 33.435 | 329 | 156 | 10 | 30 | 301 | 108 | 430 | 3.56e-39 | 147 |
Find 108 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTAGCAAAGCTTGCTTCTT+TGG | 0.193643 | 3.4:-16090869 | MS.gene51810:CDS |
TCTTCGTTTGGTGACAAATT+TGG | 0.202470 | 3.4:+16091066 | None:intergenic |
AAACAGATGGATTACATATT+AGG | 0.203643 | 3.4:-16091171 | MS.gene51810:intron |
TTATATACTTACTTGCATTT+TGG | 0.211501 | 3.4:+16091646 | None:intergenic |
AGGAGACGACGAGCATATTT+AGG | 0.253760 | 3.4:+16092534 | None:intergenic |
GGAAACTCCCTACCAGTAAT+AGG | 0.258368 | 3.4:-16093233 | MS.gene51810:CDS |
ATTGAATAGGTTGACCTATC+AGG | 0.261586 | 3.4:-16092918 | MS.gene51810:intron |
CCAAATCCACATGAGCTAAC+TGG | 0.270045 | 3.4:-16090997 | MS.gene51810:CDS |
TGGATAATAAAAGAGTATAT+TGG | 0.277192 | 3.4:-16093374 | MS.gene51810:CDS |
CTAGCAAAGCTTGCTTCTTT+GGG | 0.289529 | 3.4:-16090868 | MS.gene51810:CDS |
AGATCATACATGGTAGGATT+TGG | 0.292392 | 3.4:-16091132 | MS.gene51810:CDS |
GTCAAATTAATTTGCTTGTA+AGG | 0.297987 | 3.4:+16091910 | None:intergenic |
GCTGGAGACAATGTGAAATA+TGG | 0.300456 | 3.4:-16092882 | MS.gene51810:CDS |
CCCTTCTACTGCTCCTATTC+AGG | 0.300909 | 3.4:-16092268 | MS.gene51810:CDS |
CCAGTTAGCTCATGTGGATT+TGG | 0.301161 | 3.4:+16090997 | None:intergenic |
TCTCCTCAATAAAGCAAAAT+TGG | 0.304496 | 3.4:-16092517 | MS.gene51810:intron |
ATTTGCTTGTAAGGACTATC+AGG | 0.334629 | 3.4:+16091919 | None:intergenic |
TTCTTAGAGGCGCAAAGATC+AGG | 0.334942 | 3.4:-16093255 | MS.gene51810:CDS |
TCTCCAAGGGACCCTATTAC+TGG | 0.349607 | 3.4:+16093221 | None:intergenic |
AAAATCTCTCATCTTCTTAG+AGG | 0.350453 | 3.4:-16093268 | MS.gene51810:CDS |
AACAGATGGATTACATATTA+GGG | 0.358207 | 3.4:-16091170 | MS.gene51810:intron |
ACCATGTATGATCTTCCTTC+AGG | 0.359145 | 3.4:+16091141 | None:intergenic |
ATTTGAAGCAACAAATGAAA+TGG | 0.361468 | 3.4:-16092799 | MS.gene51810:CDS |
GGATAATAAAAGAGTATATT+GGG | 0.376123 | 3.4:-16093373 | MS.gene51810:CDS |
GCCTGAATAGGAGCAGTAGA+AGG | 0.378778 | 3.4:+16092267 | None:intergenic |
CAACAATGGTGATCATCAAC+TGG | 0.379312 | 3.4:+16092687 | None:intergenic |
AGGAAACATGATACTTGTTA+AGG | 0.381146 | 3.4:-16093319 | MS.gene51810:CDS |
GTCCCACAAGCTTTAAGAAA+TGG | 0.381892 | 3.4:-16091035 | MS.gene51810:CDS |
ATATTCAAAATGCCATTAGA+TGG | 0.385203 | 3.4:-16092773 | MS.gene51810:CDS |
GGACAATTTATCTCTTCGTT+TGG | 0.393229 | 3.4:+16091054 | None:intergenic |
TTGGCACTGAAGCACCTCTA+TGG | 0.398776 | 3.4:+16091085 | None:intergenic |
GATCATACATGGTAGGATTT+GGG | 0.403815 | 3.4:-16091131 | MS.gene51810:CDS |
TATGTGCAAGGTTCGGTCTT+AGG | 0.410154 | 3.4:+16090916 | None:intergenic |
CAAATCCACATGAGCTAACT+GGG | 0.410353 | 3.4:-16090996 | MS.gene51810:CDS |
CTATGGTGAGCTTGTGTTGG+TGG | 0.424826 | 3.4:+16091102 | None:intergenic |
ATAATCTGTACCCCATCTAA+TGG | 0.430183 | 3.4:+16092761 | None:intergenic |
TCACAGTTACTACATTATCA+TGG | 0.431674 | 3.4:-16092845 | MS.gene51810:CDS |
AGCTGAAACTTCTGCTGCTA+TGG | 0.438179 | 3.4:-16092589 | MS.gene51810:CDS |
TAGCCATTTCTTAAAGCTTG+TGG | 0.441135 | 3.4:+16091032 | None:intergenic |
TAACAAGTATCATGTTTCCT+TGG | 0.445707 | 3.4:+16093322 | None:intergenic |
ACATACATTATAGCCTGAAT+AGG | 0.446803 | 3.4:+16092255 | None:intergenic |
AAGCAAATTAATTTGACTCC+TGG | 0.449579 | 3.4:-16091904 | MS.gene51810:intron |
TTGAACTTGTCGTTGATGTC+AGG | 0.451159 | 3.4:+16090958 | None:intergenic |
GAATTGGCGAAATCTCATAA+AGG | 0.452861 | 3.4:-16092310 | MS.gene51810:CDS |
TTTGAAGCAACAAATGAAAT+GGG | 0.463240 | 3.4:-16092798 | MS.gene51810:CDS |
GAAACTCCCTACCAGTAATA+GGG | 0.466284 | 3.4:-16093232 | MS.gene51810:CDS |
TCTCATAAAGGAACCTATGA+TGG | 0.468029 | 3.4:-16092298 | MS.gene51810:CDS |
GGAAACATGATACTTGTTAA+GGG | 0.470689 | 3.4:-16093318 | MS.gene51810:CDS |
GGAGACTCAGCAATGGATGA+TGG | 0.473201 | 3.4:-16093198 | MS.gene51810:CDS |
ACATGGCTTGCTTTGTTCCA+AGG | 0.473298 | 3.4:-16093339 | MS.gene51810:CDS |
AGCCATTTCTTAAAGCTTGT+GGG | 0.474167 | 3.4:+16091033 | None:intergenic |
ACTTGCCAAATATAATCAAA+AGG | 0.476084 | 3.4:-16091717 | MS.gene51810:CDS |
TTGAATAGGTTGACCTATCA+GGG | 0.476637 | 3.4:-16092917 | MS.gene51810:intron |
GAGCTAACTGGGGCCATTGT+TGG | 0.483453 | 3.4:-16090985 | MS.gene51810:CDS |
GAAGGGACATTCTCCATCAT+AGG | 0.487500 | 3.4:+16092285 | None:intergenic |
TATTCAAAATGCCATTAGAT+GGG | 0.489997 | 3.4:-16092772 | MS.gene51810:CDS |
AGTTGATGATCACCATTGTT+GGG | 0.498423 | 3.4:-16092685 | MS.gene51810:CDS |
CTACCAGTAATAGGGTCCCT+TGG | 0.501729 | 3.4:-16093224 | MS.gene51810:CDS |
CAGTTGATGATCACCATTGT+TGG | 0.502750 | 3.4:-16092686 | MS.gene51810:CDS |
TGCTAGAACACCGGCTGCAA+GGG | 0.505101 | 3.4:+16090885 | None:intergenic |
TAAGGGTCAATTTAATTACA+AGG | 0.517252 | 3.4:-16093301 | MS.gene51810:CDS |
TTGCTGAGTCTCCTCTCCAA+GGG | 0.521853 | 3.4:+16093208 | None:intergenic |
CACAGTTACTACATTATCAT+GGG | 0.526401 | 3.4:-16092844 | MS.gene51810:CDS |
ATTAACATATGTGCAAGGTT+CGG | 0.528389 | 3.4:+16090909 | None:intergenic |
CCTCTATGGTGAGCTTGTGT+TGG | 0.530222 | 3.4:+16091099 | None:intergenic |
TTGCTAGAACACCGGCTGCA+AGG | 0.530745 | 3.4:+16090884 | None:intergenic |
ATTTATAGGATGAGCTAATG+TGG | 0.541672 | 3.4:-16092149 | MS.gene51810:intron |
CTAACTGGGGCCATTGTTGG+TGG | 0.545679 | 3.4:-16090982 | MS.gene51810:CDS |
GCTGGTGGCATATTGTGTAT+TGG | 0.548328 | 3.4:+16091772 | None:intergenic |
TTTGGCAAAATCAAGGAGAT+GGG | 0.548916 | 3.4:+16091664 | None:intergenic |
CTGGAGACAATGTGAAATAT+GGG | 0.550838 | 3.4:-16092881 | MS.gene51810:CDS |
TATGTTAATTCCCTTGCAGC+CGG | 0.552392 | 3.4:-16090895 | MS.gene51810:CDS |
ATTGCTGAGTCTCCTCTCCA+AGG | 0.554564 | 3.4:+16093207 | None:intergenic |
CAAGGGACCCTATTACTGGT+AGG | 0.555871 | 3.4:+16093225 | None:intergenic |
ATGGCCCCAGTTAGCTCATG+TGG | 0.556380 | 3.4:+16090991 | None:intergenic |
AGCAAGCTTTGCTAGAACAC+CGG | 0.556441 | 3.4:+16090876 | None:intergenic |
TCTTAGAGGCGCAAAGATCA+GGG | 0.558185 | 3.4:-16093254 | MS.gene51810:CDS |
GGGTTTATTCATATGAGAGA+TGG | 0.573447 | 3.4:-16091797 | MS.gene51810:CDS |
TATAATCAAAAGGTCAAATG+TGG | 0.574640 | 3.4:-16091707 | MS.gene51810:CDS |
AAGGGACCCTATTACTGGTA+GGG | 0.578968 | 3.4:+16093226 | None:intergenic |
CATGGCTATACATGGCAACA+AGG | 0.579656 | 3.4:-16092119 | MS.gene51810:CDS |
CTTGAAGCATTTAAAGCACA+CGG | 0.583523 | 3.4:-16091967 | MS.gene51810:CDS |
TCCTGAAGGAAGATCATACA+TGG | 0.586107 | 3.4:-16091142 | MS.gene51810:CDS |
GGCTGCAACATGGCTATACA+TGG | 0.586171 | 3.4:-16092127 | MS.gene51810:CDS |
TCAGCTGCAATCTCAGTACC+AGG | 0.587163 | 3.4:+16092606 | None:intergenic |
TTTATAGGATGAGCTAATGT+GGG | 0.588691 | 3.4:-16092148 | MS.gene51810:intron |
CCTGAATAGGAGCAGTAGAA+GGG | 0.590602 | 3.4:+16092268 | None:intergenic |
CCAACACAAGCTCACCATAG+AGG | 0.591866 | 3.4:-16091099 | MS.gene51810:CDS |
GATGTCAGGTCCACCAACAA+TGG | 0.594292 | 3.4:+16090972 | None:intergenic |
AGCTAATGTGGGCTGCAACA+TGG | 0.614595 | 3.4:-16092137 | MS.gene51810:CDS |
GAAGGAAGATCATACATGGT+AGG | 0.615068 | 3.4:-16091138 | MS.gene51810:CDS |
GTAGTAACTGTGAATGCCAT+TGG | 0.617815 | 3.4:+16092855 | None:intergenic |
AGTGAACAAGAAAGATGTGC+TGG | 0.624046 | 3.4:+16091754 | None:intergenic |
TGTGAAATATGGGCTACCAA+TGG | 0.631971 | 3.4:-16092871 | MS.gene51810:CDS |
AGTAATAGGGTCCCTTGGAG+AGG | 0.634716 | 3.4:-16093219 | MS.gene51810:CDS |
GCTTGTAAGGACTATCAGGA+AGG | 0.637627 | 3.4:+16091923 | None:intergenic |
TTGGAGAGGAGACTCAGCAA+TGG | 0.645168 | 3.4:-16093205 | MS.gene51810:CDS |
ATTCAAAATGCCATTAGATG+GGG | 0.646428 | 3.4:-16092771 | MS.gene51810:CDS |
AGGGAATTAACATATGTGCA+AGG | 0.651111 | 3.4:+16090904 | None:intergenic |
AACAATGGTGATCATCAACT+GGG | 0.657794 | 3.4:+16092688 | None:intergenic |
ATTGGGTCATCATTGCAACA+TGG | 0.666261 | 3.4:-16093356 | MS.gene51810:CDS |
TTTCTGGTGGTGCCCAACAA+TGG | 0.671282 | 3.4:+16092673 | None:intergenic |
TGAATAGGTTGACCTATCAG+GGG | 0.682641 | 3.4:-16092916 | MS.gene51810:intron |
GAATAGGTTGACCTATCAGG+GGG | 0.686550 | 3.4:-16092915 | MS.gene51810:intron |
AGTTACTACATTATCATGGG+CGG | 0.687711 | 3.4:-16092841 | MS.gene51810:CDS |
TTAATTGATAGTAACACACC+TGG | 0.700118 | 3.4:-16092624 | MS.gene51810:CDS |
GAACAAGAAAGATGTGCTGG+TGG | 0.714032 | 3.4:+16091757 | None:intergenic |
AAATCCACATGAGCTAACTG+GGG | 0.756843 | 3.4:-16090995 | MS.gene51810:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATAATGTATTTTTTTAAG+GGG | + | chr3.4:16092636-16092655 | None:intergenic | 10.0% |
!! | ATATTTAAATATGATTATGC+AGG | - | chr3.4:16092418-16092437 | MS.gene51810:intron | 15.0% |
!!! | TACATATAATCTATTTCTTT+GGG | + | chr3.4:16091520-16091539 | None:intergenic | 15.0% |
!!! | TTGATTTTATTGAATTGAAT+AGG | - | chr3.4:16091308-16091327 | MS.gene51810:intron | 15.0% |
!! | AAGAAATAGATTATATGTAG+AGG | - | chr3.4:16091521-16091540 | MS.gene51810:intron | 20.0% |
!! | ACGTACAAAATGAATAATTT+GGG | - | chr3.4:16091276-16091295 | MS.gene51810:intron | 20.0% |
!! | ACTAAGAGTGAATTAATATT+GGG | - | chr3.4:16092038-16092057 | MS.gene51810:intron | 20.0% |
!! | CTCAAAACAAAATCATTATT+AGG | - | chr3.4:16091091-16091110 | MS.gene51810:CDS | 20.0% |
!! | TACGTACAAAATGAATAATT+TGG | - | chr3.4:16091275-16091294 | MS.gene51810:intron | 20.0% |
!! | TTTATCTCTAAATATTAGTG+AGG | - | chr3.4:16091146-16091165 | MS.gene51810:CDS | 20.0% |
!!! | CATTTTTCTTAACATGTAAT+TGG | + | chr3.4:16091799-16091818 | None:intergenic | 20.0% |
!!! | CTACATATAATCTATTTCTT+TGG | + | chr3.4:16091521-16091540 | None:intergenic | 20.0% |
!!! | GATAATTCAACTTTTTCTAA+TGG | - | chr3.4:16091217-16091236 | MS.gene51810:intron | 20.0% |
!!! | GGATAATAAAAGAGTATATT+GGG | - | chr3.4:16090866-16090885 | MS.gene51810:CDS | 20.0% |
!!! | TGGATAATAAAAGAGTATAT+TGG | - | chr3.4:16090865-16090884 | MS.gene51810:CDS | 20.0% |
!!! | TTATATACTTACTTGCATTT+TGG | + | chr3.4:16092596-16092615 | None:intergenic | 20.0% |
!!! | TTTGACCTTTTGATTATATT+TGG | + | chr3.4:16092530-16092549 | None:intergenic | 20.0% |
! | AAATGTACATGTAATTTACC+AGG | + | chr3.4:16092356-16092375 | None:intergenic | 25.0% |
! | AATAGATTATATGTAGAGGT+AGG | - | chr3.4:16091525-16091544 | MS.gene51810:intron | 25.0% |
! | ACTTGCCAAATATAATCAAA+AGG | - | chr3.4:16092522-16092541 | MS.gene51810:CDS | 25.0% |
! | ATAGACATATATAATCGTAG+AGG | - | chr3.4:16092966-16092985 | MS.gene51810:intron | 25.0% |
! | ATAGATTATATGTAGAGGTA+GGG | - | chr3.4:16091526-16091545 | MS.gene51810:intron | 25.0% |
! | ATATTCAAAATGCCATTAGA+TGG | - | chr3.4:16091466-16091485 | MS.gene51810:intron | 25.0% |
! | ATGAAATTGATCTTCAATGT+TGG | + | chr3.4:16091172-16091191 | None:intergenic | 25.0% |
! | ATGTAATTGGTATATTGTCT+AGG | + | chr3.4:16091786-16091805 | None:intergenic | 25.0% |
! | CACTAAGAGTGAATTAATAT+TGG | - | chr3.4:16092037-16092056 | MS.gene51810:intron | 25.0% |
! | TAAGGGTCAATTTAATTACA+AGG | - | chr3.4:16090938-16090957 | MS.gene51810:CDS | 25.0% |
! | TATAATCAAAAGGTCAAATG+TGG | - | chr3.4:16092532-16092551 | MS.gene51810:CDS | 25.0% |
! | TATTCAAAATGCCATTAGAT+GGG | - | chr3.4:16091467-16091486 | MS.gene51810:intron | 25.0% |
! | TTAAATATGATTATGCAGGT+GGG | - | chr3.4:16092422-16092441 | MS.gene51810:intron | 25.0% |
! | TTAATGTGATGCGTATTTAT+AGG | - | chr3.4:16092076-16092095 | MS.gene51810:CDS | 25.0% |
! | TTTAAATATGATTATGCAGG+TGG | - | chr3.4:16092421-16092440 | MS.gene51810:intron | 25.0% |
!! | ATTTGAAGCAACAAATGAAA+TGG | - | chr3.4:16091440-16091459 | MS.gene51810:intron | 25.0% |
!! | TTTGAAGCAACAAATGAAAT+GGG | - | chr3.4:16091441-16091460 | MS.gene51810:intron | 25.0% |
!!! | AAACAGATGGATTACATATT+AGG | - | chr3.4:16093068-16093087 | MS.gene51810:intron | 25.0% |
!!! | AACAGATGGATTACATATTA+GGG | - | chr3.4:16093069-16093088 | MS.gene51810:intron | 25.0% |
!!! | ATACCAATTTTGCTTTATTG+AGG | + | chr3.4:16091728-16091747 | None:intergenic | 25.0% |
!!! | GTCAAATTAATTTGCTTGTA+AGG | + | chr3.4:16092332-16092351 | None:intergenic | 25.0% |
!!! | TTACATTTTGAAGGTCAAAA+AGG | - | chr3.4:16092248-16092267 | MS.gene51810:intron | 25.0% |
AAAATCTCTCATCTTCTTAG+AGG | - | chr3.4:16090971-16090990 | MS.gene51810:CDS | 30.0% | |
ACATACATTATAGCCTGAAT+AGG | + | chr3.4:16091987-16092006 | None:intergenic | 30.0% | |
ACATCATACTACTACTACAT+CGG | + | chr3.4:16092807-16092826 | None:intergenic | 30.0% | |
AGCATATGTAATAGCAACTT+TGG | + | chr3.4:16092994-16093013 | None:intergenic | 30.0% | |
ATATTAGGGAAAAATCCTGA+AGG | - | chr3.4:16093083-16093102 | MS.gene51810:intron | 30.0% | |
ATATTCCCAACCAATACTAT+AGG | + | chr3.4:16091868-16091887 | None:intergenic | 30.0% | |
ATCAACATGCCTAAAAACAA+TGG | + | chr3.4:16091685-16091704 | None:intergenic | 30.0% | |
ATTAACATATGTGCAAGGTT+CGG | + | chr3.4:16093333-16093352 | None:intergenic | 30.0% | |
ATTCAAAATGCCATTAGATG+GGG | - | chr3.4:16091468-16091487 | MS.gene51810:intron | 30.0% | |
ATTTATAGGATGAGCTAATG+TGG | - | chr3.4:16092090-16092109 | MS.gene51810:CDS | 30.0% | |
CACAGTTACTACATTATCAT+GGG | - | chr3.4:16091395-16091414 | MS.gene51810:intron | 30.0% | |
CACTCTTAGTGAATTAAGAA+AGG | + | chr3.4:16092028-16092047 | None:intergenic | 30.0% | |
GTTGAAGTAACCTATAGTAT+TGG | - | chr3.4:16091855-16091874 | MS.gene51810:intron | 30.0% | |
TAACAAGTATCATGTTTCCT+TGG | + | chr3.4:16090920-16090939 | None:intergenic | 30.0% | |
TAGAGTGACTATCTAATACT+TGG | - | chr3.4:16093040-16093059 | MS.gene51810:intron | 30.0% | |
TAGATTATATGTAGAGGTAG+GGG | - | chr3.4:16091527-16091546 | MS.gene51810:intron | 30.0% | |
TCACAGTTACTACATTATCA+TGG | - | chr3.4:16091394-16091413 | MS.gene51810:intron | 30.0% | |
TCTCCTCAATAAAGCAAAAT+TGG | - | chr3.4:16091722-16091741 | MS.gene51810:CDS | 30.0% | |
TTTATAGGATGAGCTAATGT+GGG | - | chr3.4:16092091-16092110 | MS.gene51810:CDS | 30.0% | |
! | AAGCAAATTAATTTGACTCC+TGG | - | chr3.4:16092335-16092354 | MS.gene51810:intron | 30.0% |
! | AGGAAACATGATACTTGTTA+AGG | - | chr3.4:16090920-16090939 | MS.gene51810:CDS | 30.0% |
! | AGTTGCTATTACATATGCTT+TGG | - | chr3.4:16092995-16093014 | MS.gene51810:intron | 30.0% |
! | ATTTATTTCTCCCAATTTCC+TGG | - | chr3.4:16091897-16091916 | MS.gene51810:intron | 30.0% |
! | CTCTTTGTCTTCATATTTTC+TGG | + | chr3.4:16091585-16091604 | None:intergenic | 30.0% |
! | GGAAACATGATACTTGTTAA+GGG | - | chr3.4:16090921-16090940 | MS.gene51810:CDS | 30.0% |
! | TTAATTGATAGTAACACACC+TGG | - | chr3.4:16091615-16091634 | MS.gene51810:intron | 30.0% |
! | TTTGTCTTCATATTTTCTGG+TGG | + | chr3.4:16091582-16091601 | None:intergenic | 30.0% |
!! | AAGTAACCTATAGTATTGGT+TGG | - | chr3.4:16091859-16091878 | MS.gene51810:intron | 30.0% |
!! | AGTAACCTATAGTATTGGTT+GGG | - | chr3.4:16091860-16091879 | MS.gene51810:intron | 30.0% |
AACAATGGTGATCATCAACT+GGG | + | chr3.4:16091554-16091573 | None:intergenic | 35.0% | |
AGATCATACATGGTAGGATT+TGG | - | chr3.4:16093107-16093126 | MS.gene51810:intron | 35.0% | |
AGCACATGTTATAGCAACTT+TGG | + | chr3.4:16092931-16092950 | None:intergenic | 35.0% | |
AGCCATTTCTTAAAGCTTGT+GGG | + | chr3.4:16093209-16093228 | None:intergenic | 35.0% | |
AGGGAATTAACATATGTGCA+AGG | + | chr3.4:16093338-16093357 | None:intergenic | 35.0% | |
AGTTACTACATTATCATGGG+CGG | - | chr3.4:16091398-16091417 | MS.gene51810:intron | 35.0% | |
AGTTGCTATAACATGTGCTT+TGG | - | chr3.4:16092932-16092951 | MS.gene51810:intron | 35.0% | |
ATAATCTGTACCCCATCTAA+TGG | + | chr3.4:16091481-16091500 | None:intergenic | 35.0% | |
ATACTTGGATGGTAAACAGA+TGG | - | chr3.4:16093055-16093074 | MS.gene51810:intron | 35.0% | |
ATTTGCTTGTAAGGACTATC+AGG | + | chr3.4:16092323-16092342 | None:intergenic | 35.0% | |
CTGGAGACAATGTGAAATAT+GGG | - | chr3.4:16091358-16091377 | MS.gene51810:intron | 35.0% | |
CTTGAACTCCAGCATATTTA+AGG | + | chr3.4:16092214-16092233 | None:intergenic | 35.0% | |
GAATTGGCGAAATCTCATAA+AGG | - | chr3.4:16091929-16091948 | MS.gene51810:CDS | 35.0% | |
GATCATACATGGTAGGATTT+GGG | - | chr3.4:16093108-16093127 | MS.gene51810:intron | 35.0% | |
GGACAATTTATCTCTTCGTT+TGG | + | chr3.4:16093188-16093207 | None:intergenic | 35.0% | |
GGGTTTATTCATATGAGAGA+TGG | - | chr3.4:16092442-16092461 | MS.gene51810:intron | 35.0% | |
GTGACTATCTAATACTTGGA+TGG | - | chr3.4:16093044-16093063 | MS.gene51810:intron | 35.0% | |
TAGCCATTTCTTAAAGCTTG+TGG | + | chr3.4:16093210-16093229 | None:intergenic | 35.0% | |
TAGTGTAGCAGAATTCAGTT+GGG | - | chr3.4:16092187-16092206 | MS.gene51810:intron | 35.0% | |
TCTCATAAAGGAACCTATGA+TGG | - | chr3.4:16091941-16091960 | MS.gene51810:CDS | 35.0% | |
TTTGGCAAAATCAAGGAGAT+GGG | + | chr3.4:16092578-16092597 | None:intergenic | 35.0% | |
! | ATTGAATAGGTTGACCTATC+AGG | - | chr3.4:16091321-16091340 | MS.gene51810:intron | 35.0% |
! | CTCACTCAGTTACATTTTGA+AGG | - | chr3.4:16092239-16092258 | MS.gene51810:intron | 35.0% |
! | CTTGAAGCATTTAAAGCACA+CGG | - | chr3.4:16092272-16092291 | MS.gene51810:CDS | 35.0% |
! | TCTTCGTTTGGTGACAAATT+TGG | + | chr3.4:16093176-16093195 | None:intergenic | 35.0% |
! | TTGAATAGGTTGACCTATCA+GGG | - | chr3.4:16091322-16091341 | MS.gene51810:intron | 35.0% |
! | TTTTGGCAAAATCAAGGAGA+TGG | + | chr3.4:16092579-16092598 | None:intergenic | 35.0% |
!! | AGTTGATGATCACCATTGTT+GGG | - | chr3.4:16091554-16091573 | MS.gene51810:intron | 35.0% |
!! | CTGCTTCTTCCATTGTTTTT+AGG | - | chr3.4:16091673-16091692 | MS.gene51810:CDS | 35.0% |
!! | CTTGCATTTTGGCAAAATCA+AGG | + | chr3.4:16092585-16092604 | None:intergenic | 35.0% |
AAATCCACATGAGCTAACTG+GGG | - | chr3.4:16093244-16093263 | MS.gene51810:CDS | 40.0% | |
ACCATGTATGATCTTCCTTC+AGG | + | chr3.4:16093101-16093120 | None:intergenic | 40.0% | |
AGTGAACAAGAAAGATGTGC+TGG | + | chr3.4:16092488-16092507 | None:intergenic | 40.0% | |
AGTTGGGACCTTAAATATGC+TGG | - | chr3.4:16092203-16092222 | MS.gene51810:intron | 40.0% | |
ATTGGGTCATCATTGCAACA+TGG | - | chr3.4:16090883-16090902 | MS.gene51810:CDS | 40.0% | |
CAAATCCACATGAGCTAACT+GGG | - | chr3.4:16093243-16093262 | MS.gene51810:CDS | 40.0% | |
CAACAATGGTGATCATCAAC+TGG | + | chr3.4:16091555-16091574 | None:intergenic | 40.0% | |
CATCATAATATCCCCCTGAT+AGG | + | chr3.4:16091338-16091357 | None:intergenic | 40.0% | |
CTAGTGTAGCAGAATTCAGT+TGG | - | chr3.4:16092186-16092205 | MS.gene51810:intron | 40.0% | |
GAAACTCCCTACCAGTAATA+GGG | - | chr3.4:16091007-16091026 | MS.gene51810:CDS | 40.0% | |
GAAGGAAGATCATACATGGT+AGG | - | chr3.4:16093101-16093120 | MS.gene51810:intron | 40.0% | |
GCTGGAGACAATGTGAAATA+TGG | - | chr3.4:16091357-16091376 | MS.gene51810:intron | 40.0% | |
GTAGTAACTGTGAATGCCAT+TGG | + | chr3.4:16091387-16091406 | None:intergenic | 40.0% | |
TATGTTAATTCCCTTGCAGC+CGG | - | chr3.4:16093344-16093363 | MS.gene51810:CDS | 40.0% | |
TCCTGAAGGAAGATCATACA+TGG | - | chr3.4:16093097-16093116 | MS.gene51810:intron | 40.0% | |
TTGAACTTGTCGTTGATGTC+AGG | + | chr3.4:16093284-16093303 | None:intergenic | 40.0% | |
! | CTAGCAAAGCTTGCTTCTTT+GGG | - | chr3.4:16093371-16093390 | MS.gene51810:CDS | 40.0% |
! | TCTAGCAAAGCTTGCTTCTT+TGG | - | chr3.4:16093370-16093389 | MS.gene51810:CDS | 40.0% |
! | TGAATAGGTTGACCTATCAG+GGG | - | chr3.4:16091323-16091342 | MS.gene51810:intron | 40.0% |
! | TGTGAAATATGGGCTACCAA+TGG | - | chr3.4:16091368-16091387 | MS.gene51810:intron | 40.0% |
!! | CAGTTGATGATCACCATTGT+TGG | - | chr3.4:16091553-16091572 | MS.gene51810:intron | 40.0% |
!! | GTCCCACAAGCTTTAAGAAA+TGG | - | chr3.4:16093204-16093223 | MS.gene51810:CDS | 40.0% |
AAGGGACCCTATTACTGGTA+GGG | + | chr3.4:16091016-16091035 | None:intergenic | 45.0% | |
ACACCATACCACAATCGTAG+AGG | - | chr3.4:16092903-16092922 | MS.gene51810:CDS | 45.0% | |
AGCAAGCTTTGCTAGAACAC+CGG | + | chr3.4:16093366-16093385 | None:intergenic | 45.0% | |
AGCTGAAACTTCTGCTGCTA+TGG | - | chr3.4:16091650-16091669 | MS.gene51810:intron | 45.0% | |
AGGAGACGACGAGCATATTT+AGG | + | chr3.4:16091708-16091727 | None:intergenic | 45.0% | |
CATGGCTATACATGGCAACA+AGG | - | chr3.4:16092120-16092139 | MS.gene51810:CDS | 45.0% | |
CCAAATCCACATGAGCTAAC+TGG | - | chr3.4:16093242-16093261 | MS.gene51810:CDS | 45.0% | |
CCAGTTAGCTCATGTGGATT+TGG | + | chr3.4:16093245-16093264 | None:intergenic | 45.0% | |
CCTGAATAGGAGCAGTAGAA+GGG | + | chr3.4:16091974-16091993 | None:intergenic | 45.0% | |
CGAAAAGCTGCCAGGAAATT+GGG | + | chr3.4:16091910-16091929 | None:intergenic | 45.0% | |
CTTTGGATCCTCTACGATTG+TGG | + | chr3.4:16092914-16092933 | None:intergenic | 45.0% | |
GAACAAGAAAGATGTGCTGG+TGG | + | chr3.4:16092485-16092504 | None:intergenic | 45.0% | |
GAAGGGACATTCTCCATCAT+AGG | + | chr3.4:16091957-16091976 | None:intergenic | 45.0% | |
GATCCTCTACGATTGTGGTA+TGG | + | chr3.4:16092909-16092928 | None:intergenic | 45.0% | |
GCTGGTGGCATATTGTGTAT+TGG | + | chr3.4:16092470-16092489 | None:intergenic | 45.0% | |
GCTTGTAAGGACTATCAGGA+AGG | + | chr3.4:16092319-16092338 | None:intergenic | 45.0% | |
GGAAACTCCCTACCAGTAAT+AGG | - | chr3.4:16091006-16091025 | MS.gene51810:CDS | 45.0% | |
TCAGGGGGATATTATGATGC+TGG | - | chr3.4:16091339-16091358 | MS.gene51810:intron | 45.0% | |
TCGAAAAGCTGCCAGGAAAT+TGG | + | chr3.4:16091911-16091930 | None:intergenic | 45.0% | |
! | GAATAGGTTGACCTATCAGG+GGG | - | chr3.4:16091324-16091343 | MS.gene51810:intron | 45.0% |
! | TATGTGCAAGGTTCGGTCTT+AGG | + | chr3.4:16093326-16093345 | None:intergenic | 45.0% |
! | TCTTAGAGGCGCAAAGATCA+GGG | - | chr3.4:16090985-16091004 | MS.gene51810:CDS | 45.0% |
! | TGATGTTGCAGCTTTAGCGA+CGG | - | chr3.4:16092821-16092840 | MS.gene51810:CDS | 45.0% |
! | TTCCTGGCAGCTTTTCGAAT+TGG | - | chr3.4:16091913-16091932 | MS.gene51810:CDS | 45.0% |
! | TTCTTAGAGGCGCAAAGATC+AGG | - | chr3.4:16090984-16091003 | MS.gene51810:CDS | 45.0% |
!! | ACATGGCTTGCTTTGTTCCA+AGG | - | chr3.4:16090900-16090919 | MS.gene51810:CDS | 45.0% |
!!! | ATAAATAATGTATTTTTTTA+AGG | + | chr3.4:16092638-16092657 | None:intergenic | 5.0% |
!!! | TAAATAATGTATTTTTTTAA+GGG | + | chr3.4:16092637-16092656 | None:intergenic | 5.0% |
AGTAATAGGGTCCCTTGGAG+AGG | - | chr3.4:16091020-16091039 | MS.gene51810:CDS | 50.0% | |
ATTGCTGAGTCTCCTCTCCA+AGG | + | chr3.4:16091035-16091054 | None:intergenic | 50.0% | |
CAAGGGACCCTATTACTGGT+AGG | + | chr3.4:16091017-16091036 | None:intergenic | 50.0% | |
CCAACACAAGCTCACCATAG+AGG | - | chr3.4:16093140-16093159 | MS.gene51810:intron | 50.0% | |
CCCTTCTACTGCTCCTATTC+AGG | - | chr3.4:16091971-16091990 | MS.gene51810:CDS | 50.0% | |
CCTCTATGGTGAGCTTGTGT+TGG | + | chr3.4:16093143-16093162 | None:intergenic | 50.0% | |
CTACCAGTAATAGGGTCCCT+TGG | - | chr3.4:16091015-16091034 | MS.gene51810:CDS | 50.0% | |
CTATGGTGAGCTTGTGTTGG+TGG | + | chr3.4:16093140-16093159 | None:intergenic | 50.0% | |
GATGTCAGGTCCACCAACAA+TGG | + | chr3.4:16093270-16093289 | None:intergenic | 50.0% | |
GCCTGAATAGGAGCAGTAGA+AGG | + | chr3.4:16091975-16091994 | None:intergenic | 50.0% | |
GGAGACTCAGCAATGGATGA+TGG | - | chr3.4:16091041-16091060 | MS.gene51810:CDS | 50.0% | |
GGCTGCAACATGGCTATACA+TGG | - | chr3.4:16092112-16092131 | MS.gene51810:CDS | 50.0% | |
TCAGCTGCAATCTCAGTACC+AGG | + | chr3.4:16091636-16091655 | None:intergenic | 50.0% | |
TCTCCAAGGGACCCTATTAC+TGG | + | chr3.4:16091021-16091040 | None:intergenic | 50.0% | |
TTGCTGAGTCTCCTCTCCAA+GGG | + | chr3.4:16091034-16091053 | None:intergenic | 50.0% | |
TTGGAGAGGAGACTCAGCAA+TGG | - | chr3.4:16091034-16091053 | MS.gene51810:CDS | 50.0% | |
! | AGCTAATGTGGGCTGCAACA+TGG | - | chr3.4:16092102-16092121 | MS.gene51810:CDS | 50.0% |
! | TTGGCACTGAAGCACCTCTA+TGG | + | chr3.4:16093157-16093176 | None:intergenic | 50.0% |
! | TTTCTGGTGGTGCCCAACAA+TGG | + | chr3.4:16091569-16091588 | None:intergenic | 50.0% |
ATGGCCCCAGTTAGCTCATG+TGG | + | chr3.4:16093251-16093270 | None:intergenic | 55.0% | |
CGCCAATTCGAAAAGCTGCC+AGG | + | chr3.4:16091918-16091937 | None:intergenic | 55.0% | |
CTAACTGGGGCCATTGTTGG+TGG | - | chr3.4:16093257-16093276 | MS.gene51810:CDS | 55.0% | |
GAGCTAACTGGGGCCATTGT+TGG | - | chr3.4:16093254-16093273 | MS.gene51810:CDS | 55.0% | |
! | TGCTAGAACACCGGCTGCAA+GGG | + | chr3.4:16093357-16093376 | None:intergenic | 55.0% |
! | TTGCTAGAACACCGGCTGCA+AGG | + | chr3.4:16093358-16093377 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 16090864 | 16093397 | 16090864 | ID=MS.gene51810 |
chr3.4 | mRNA | 16090864 | 16093397 | 16090864 | ID=MS.gene51810.t1;Parent=MS.gene51810 |
chr3.4 | exon | 16093185 | 16093397 | 16093185 | ID=MS.gene51810.t1.exon1;Parent=MS.gene51810.t1 |
chr3.4 | CDS | 16093185 | 16093397 | 16093185 | ID=cds.MS.gene51810.t1;Parent=MS.gene51810.t1 |
chr3.4 | exon | 16092748 | 16092931 | 16092748 | ID=MS.gene51810.t1.exon2;Parent=MS.gene51810.t1 |
chr3.4 | CDS | 16092748 | 16092931 | 16092748 | ID=cds.MS.gene51810.t1;Parent=MS.gene51810.t1 |
chr3.4 | exon | 16092518 | 16092714 | 16092518 | ID=MS.gene51810.t1.exon3;Parent=MS.gene51810.t1 |
chr3.4 | CDS | 16092518 | 16092714 | 16092518 | ID=cds.MS.gene51810.t1;Parent=MS.gene51810.t1 |
chr3.4 | exon | 16092261 | 16092338 | 16092261 | ID=MS.gene51810.t1.exon4;Parent=MS.gene51810.t1 |
chr3.4 | CDS | 16092261 | 16092338 | 16092261 | ID=cds.MS.gene51810.t1;Parent=MS.gene51810.t1 |
chr3.4 | exon | 16092058 | 16092163 | 16092058 | ID=MS.gene51810.t1.exon5;Parent=MS.gene51810.t1 |
chr3.4 | CDS | 16092058 | 16092163 | 16092058 | ID=cds.MS.gene51810.t1;Parent=MS.gene51810.t1 |
chr3.4 | exon | 16091905 | 16092027 | 16091905 | ID=MS.gene51810.t1.exon6;Parent=MS.gene51810.t1 |
chr3.4 | CDS | 16091905 | 16092027 | 16091905 | ID=cds.MS.gene51810.t1;Parent=MS.gene51810.t1 |
chr3.4 | exon | 16091658 | 16091821 | 16091658 | ID=MS.gene51810.t1.exon7;Parent=MS.gene51810.t1 |
chr3.4 | CDS | 16091658 | 16091821 | 16091658 | ID=cds.MS.gene51810.t1;Parent=MS.gene51810.t1 |
chr3.4 | exon | 16090864 | 16091187 | 16090864 | ID=MS.gene51810.t1.exon8;Parent=MS.gene51810.t1 |
chr3.4 | CDS | 16090864 | 16091187 | 16090864 | ID=cds.MS.gene51810.t1;Parent=MS.gene51810.t1 |
Gene Sequence |
Protein sequence |