AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54951


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54951.t1 MTR_7g083900 97.089 481 7 5 1 480 1 475 0.0 939
MS.gene54951.t1 MTR_7g083900 96.888 482 7 6 1 480 1 476 0.0 934
MS.gene54951.t1 MTR_3g498695 47.441 508 183 20 21 479 12 484 4.71e-122 365
MS.gene54951.t1 MTR_3g498695 47.244 508 183 21 21 479 12 483 2.76e-119 358
MS.gene54951.t1 MTR_3g030700 50.183 273 114 6 217 477 113 375 3.34e-71 231
MS.gene54951.t1 MTR_2g081040 57.143 189 79 1 289 477 175 361 1.06e-66 218
MS.gene54951.t1 MTR_3g104100 54.497 189 84 1 289 477 193 379 3.15e-63 210
MS.gene54951.t1 MTR_3g111290 44.724 199 82 5 281 478 163 334 6.62e-40 147
MS.gene54951.t1 MTR_5g030770 44.878 205 86 5 278 478 141 322 1.30e-37 140
MS.gene54951.t1 MTR_5g030770 44.390 205 81 5 278 478 141 316 1.22e-35 135
MS.gene54951.t1 MTR_1g112680 34.742 213 118 5 278 472 304 513 8.82e-31 125
MS.gene54951.t1 MTR_8g064700 29.787 188 123 3 284 471 237 415 1.73e-18 87.8
MS.gene54951.t1 MTR_2g038040 33.163 196 118 6 282 470 43 232 1.95e-18 85.1
MS.gene54951.t1 MTR_1g072320 34.463 177 104 5 281 453 460 628 3.90e-18 87.8
MS.gene54951.t1 MTR_5g014640 29.412 187 110 5 291 471 154 324 2.13e-14 74.7
MS.gene54951.t1 MTR_5g014600 26.263 198 135 4 284 471 138 334 2.59e-14 74.3
MS.gene54951.t1 MTR_4g009540 29.787 188 112 7 293 471 154 330 5.34e-14 73.6
MS.gene54951.t1 MTR_8g024790 57.895 57 24 0 289 345 289 345 1.02e-13 73.6
MS.gene54951.t1 MTR_2g084280 28.758 153 94 1 279 431 121 258 1.03e-13 72.4
MS.gene54951.t1 MTR_4g057270 51.562 64 31 0 284 347 142 205 1.27e-13 72.4
MS.gene54951.t1 MTR_4g094762 25.510 196 133 4 282 472 283 470 1.57e-13 73.2
MS.gene54951.t1 MTR_8g024770 60.000 55 22 0 289 343 277 331 1.65e-13 72.8
MS.gene54951.t1 MTR_7g117670 45.977 87 44 1 289 372 400 486 2.36e-13 72.8
MS.gene54951.t1 MTR_2g010450 28.302 159 99 3 293 449 179 324 2.86e-13 71.2
MS.gene54951.t1 MTR_8g027495 53.333 60 28 0 289 348 456 515 3.62e-13 72.0
MS.gene54951.t1 MTR_8g067280 33.133 166 96 4 289 447 460 617 5.07e-13 71.6
MS.gene54951.t1 MTR_4g009540 29.630 162 98 6 293 449 154 304 5.36e-13 70.1
MS.gene54951.t1 MTR_4g092700 26.540 211 121 6 268 462 130 322 6.48e-13 70.1
MS.gene54951.t1 MTR_4g009110 28.856 201 123 8 278 471 162 349 7.39e-13 70.1
MS.gene54951.t1 MTR_7g096350 42.045 88 44 1 266 346 323 410 1.20e-12 70.5
MS.gene54951.t1 MTR_4g067010 28.293 205 128 5 266 469 125 311 1.93e-12 68.6
MS.gene54951.t1 MTR_5g030430 29.231 195 119 5 289 475 491 674 2.12e-12 69.7
MS.gene54951.t1 MTR_5g021250 66.337 101 17 1 53 153 1 84 2.77e-12 63.5
MS.gene54951.t1 MTR_0250s0040 27.723 202 117 5 266 458 62 243 4.64e-12 66.6
MS.gene54951.t1 MTR_5g014520 30.189 159 97 4 292 449 158 303 1.22e-11 66.2
MS.gene54951.t1 MTR_4g097950 28.169 142 97 2 293 434 72 208 1.25e-11 65.1
MS.gene54951.t1 MTR_8g009020 26.752 157 110 3 293 449 145 296 2.46e-11 65.5
MS.gene54951.t1 MTR_6g047550 37.634 93 56 2 281 372 162 253 2.87e-11 64.3
MS.gene54951.t1 MTR_2g104550 25.248 202 134 4 277 472 122 312 5.37e-11 64.3
MS.gene54951.t1 MTR_4g066460 27.273 220 139 6 252 469 119 319 5.77e-11 64.3
MS.gene54951.t1 MTR_0194s0050 28.571 217 116 9 260 443 146 356 7.90e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54951.t1 AT3G26744 54.962 393 136 11 116 479 113 493 2.34e-116 351
MS.gene54951.t1 AT3G26744 54.962 393 136 11 116 479 113 493 2.34e-116 351
MS.gene54951.t1 AT3G26744 54.962 393 136 11 116 479 113 493 2.34e-116 351
MS.gene54951.t1 AT1G12860 56.831 366 111 10 125 479 120 449 2.73e-112 339
MS.gene54951.t1 AT3G26744 53.951 367 128 11 116 453 113 467 5.90e-100 308
MS.gene54951.t1 AT1G12860 55.522 335 112 10 125 453 120 423 2.25e-95 295
MS.gene54951.t1 AT5G65640 45.146 206 93 5 276 478 160 348 9.98e-38 141
MS.gene54951.t1 AT5G10570 42.927 205 87 4 276 478 136 312 2.30e-33 129
MS.gene54951.t1 AT2G16910 40.102 197 99 6 290 472 313 504 5.62e-31 126
MS.gene54951.t1 AT5G65640 70.270 74 19 1 276 346 160 233 2.07e-21 94.7
MS.gene54951.t1 AT1G12860 38.916 203 95 8 125 322 120 298 1.02e-18 87.4
MS.gene54951.t1 AT5G57150 32.240 183 115 4 289 468 52 228 1.32e-17 82.8
MS.gene54951.t1 AT3G26744 36.596 235 110 10 116 321 113 337 1.67e-16 81.3
MS.gene54951.t1 AT4G29930 30.323 155 88 3 290 444 53 187 2.39e-16 78.6
MS.gene54951.t1 AT4G29930 30.323 155 88 3 290 444 53 187 7.36e-16 77.4
MS.gene54951.t1 AT5G57150 33.125 160 98 4 289 445 53 206 9.14e-16 76.6
MS.gene54951.t1 AT5G57150 33.333 159 97 4 289 444 53 205 1.12e-15 76.6
MS.gene54951.t1 AT5G57150 33.333 159 97 4 289 444 52 204 1.21e-15 76.6
MS.gene54951.t1 AT4G29930 30.323 155 91 4 290 444 53 190 2.84e-15 75.5
MS.gene54951.t1 AT2G28160 36.283 113 59 2 235 347 88 187 3.03e-15 77.0
MS.gene54951.t1 AT2G28160 36.283 113 59 2 235 347 88 187 3.68e-15 76.6
MS.gene54951.t1 AT2G46510 46.914 81 35 1 274 346 370 450 7.00e-15 77.4
MS.gene54951.t1 AT5G57150 33.333 159 97 4 289 444 53 205 7.19e-15 75.1
MS.gene54951.t1 AT4G29930 47.761 67 35 0 290 356 53 119 1.83e-14 72.0
MS.gene54951.t1 AT4G09820 33.333 153 67 4 284 433 353 473 1.96e-14 75.9
MS.gene54951.t1 AT4G29930 47.761 67 35 0 290 356 53 119 3.41e-14 72.8
MS.gene54951.t1 AT4G29930 47.059 68 36 0 289 356 52 119 4.94e-14 72.4
MS.gene54951.t1 AT4G29930 47.059 68 36 0 289 356 52 119 4.94e-14 72.4
MS.gene54951.t1 AT1G01260 40.650 123 56 3 238 355 392 502 9.44e-14 73.9
MS.gene54951.t1 AT1G01260 40.650 123 56 3 238 355 392 502 9.44e-14 73.9
MS.gene54951.t1 AT1G01260 40.650 123 56 3 238 355 392 502 9.44e-14 73.9
MS.gene54951.t1 AT4G17880 30.159 189 114 6 289 475 414 586 1.89e-13 73.2
MS.gene54951.t1 AT5G46760 31.707 164 94 5 289 447 413 563 3.34e-13 72.4
MS.gene54951.t1 AT1G32640 29.744 195 108 6 289 475 450 623 5.49e-13 71.6
MS.gene54951.t1 AT4G00870 47.761 67 33 1 284 348 240 306 2.13e-12 69.3
MS.gene54951.t1 AT1G10610 41.379 87 46 1 267 348 138 224 3.04e-12 68.2
MS.gene54951.t1 AT2G22760 23.669 169 118 4 282 449 110 268 3.96e-12 67.4
MS.gene54951.t1 AT1G10610 41.379 87 46 1 267 348 205 291 4.58e-12 68.2
MS.gene54951.t1 AT5G46830 31.250 192 96 8 289 466 341 510 5.63e-12 68.2
MS.gene54951.t1 AT1G10610 41.379 87 46 1 267 348 235 321 6.18e-12 67.8
MS.gene54951.t1 AT2G22760 23.669 169 118 4 282 449 110 268 1.13e-11 65.9
MS.gene54951.t1 AT2G22770 26.752 157 110 3 282 434 123 278 4.20e-11 64.7
MS.gene54951.t1 AT4G16430 41.975 81 40 1 273 346 295 375 4.82e-11 65.1
MS.gene54951.t1 AT2G22750 27.273 143 97 2 292 434 151 286 8.22e-11 63.9
MS.gene54951.t1 AT2G22750 27.273 143 97 2 292 434 155 290 8.75e-11 63.5
MS.gene54951.t1 AT2G22750 27.273 143 97 2 292 434 155 290 8.85e-11 63.5

Find 135 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCCATTTCAAATGGGTTAT+TGG 0.117688 7.2:+23536025 None:intergenic
GTTTGAAAATGGATTCTTTA+TGG 0.140965 7.2:-23536003 MS.gene54951:CDS
TTTGAAATGGGGTTTGAAAA+TGG 0.212995 7.2:-23536014 MS.gene54951:CDS
AATCTATGGTGTTTGTGTTT+TGG 0.283895 7.2:+23536111 None:intergenic
TTTGAAAATGGATTCTTTAT+GGG 0.287664 7.2:-23536002 MS.gene54951:CDS
TTGTGTTTAGGTTCGGAGTT+AGG 0.321519 7.2:+23536296 None:intergenic
GTTGTTGTTGTTATCAGGTT+CGG 0.325642 7.2:+23536208 None:intergenic
ACCAATAACCCATTTGAAAT+GGG 0.328953 7.2:-23536026 MS.gene54951:CDS
TCAGCCATCAAATTCTTTGC+AGG 0.331079 7.2:+23535543 None:intergenic
TACCAATAACCCATTTGAAA+TGG 0.336052 7.2:-23536027 MS.gene54951:CDS
TGGATTTGAAATTGAATCTA+TGG 0.348162 7.2:+23536097 None:intergenic
TTGTTGTTGTTATCAGGTTC+GGG 0.349917 7.2:+23536209 None:intergenic
AGAGAAAGGTGGAGAAGAGC+TGG 0.362560 7.2:-23535719 MS.gene54951:CDS
GCTATCTACCATGAGGGCTT+TGG 0.366010 7.2:-23534367 MS.gene54951:CDS
CGCTTCTGAAACAGCGTTGT+GGG 0.371611 7.2:+23535792 None:intergenic
TCAAATGGGACTGTTGTTAC+TGG 0.376369 7.2:-23535600 MS.gene54951:CDS
AACAAGAATCACCTTCTTCA+TGG 0.390694 7.2:-23536325 MS.gene54951:CDS
TACAGGTGGAAGTTAGAGTA+AGG 0.391657 7.2:-23534443 MS.gene54951:intron
AGGGACCCACCCATGAAAAC+AGG 0.394342 7.2:+23535957 None:intergenic
AATGATTTGAATAATTCAAA+TGG 0.403338 7.2:-23535615 MS.gene54951:CDS
CGCTGTTTCAGAAGCGTCGT+GGG 0.413477 7.2:-23535785 MS.gene54951:CDS
GCTGTTATCAGTTGTTTCAA+TGG 0.414184 7.2:-23534318 MS.gene54951:CDS
GTGGTTGTTGTGTTTAGGTT+CGG 0.421630 7.2:+23536289 None:intergenic
TGTTCGTGGTTGTTGTGTTT+AGG 0.423157 7.2:+23536284 None:intergenic
TGATGATGTTGTTGTGGTTG+TGG 0.425371 7.2:+23535840 None:intergenic
ATGAACTTGTTGAGGTGGTA+AGG 0.429477 7.2:+23536388 None:intergenic
TAATAATCTTCATAATGAAC+TGG 0.430336 7.2:-23534814 MS.gene54951:CDS
GAAGGTTGCAGCAGTGAGCC+AGG 0.431678 7.2:+23534780 None:intergenic
CAGGTTCGGGTTTGAAGAAA+GGG 0.432843 7.2:+23536222 None:intergenic
GCTTCCTGCAAAGAATTTGA+TGG 0.433280 7.2:-23535547 MS.gene54951:CDS
CAGCACTGCTTTAATTTGCT+CGG 0.447013 7.2:+23534040 None:intergenic
TAGATCCTCTTTGACTCGAC+AGG 0.449537 7.2:+23534710 None:intergenic
AGCACTGCTTTAATTTGCTC+GGG 0.451779 7.2:+23534041 None:intergenic
GAAGAAGGAAGTGGTGGTGG+TGG 0.454840 7.2:-23535693 MS.gene54951:CDS
TCAGGTTCGGGTTTGAAGAA+AGG 0.456119 7.2:+23536221 None:intergenic
GCAATAGCTATTGCTATGGC+TGG 0.459874 7.2:-23536254 MS.gene54951:CDS
TATCATTGAGTTTCTTCCTC+CGG 0.461791 7.2:+23535514 None:intergenic
CCTTGGATTGGATGTTCAGC+AGG 0.462769 7.2:-23534340 MS.gene54951:CDS
GAAGGAAGTGGTGGTGGTGG+TGG 0.463647 7.2:-23535690 MS.gene54951:CDS
ATGATAGGTTGTATATGCTT+AGG 0.465770 7.2:-23535497 MS.gene54951:CDS
GGCTTTGGATAACCTTGGAT+TGG 0.469562 7.2:-23534352 MS.gene54951:CDS
TTCCCCACGGTCTCCAACCT+CGG 0.472317 7.2:+23535750 None:intergenic
GAGAAGAGCTGGGAAGAAGA+AGG 0.472684 7.2:-23535708 MS.gene54951:CDS
AATTATGATTCTGATGAGAA+TGG 0.474232 7.2:-23535639 MS.gene54951:CDS
GGCGTTGGAGATTCCGAGGT+TGG 0.477216 7.2:-23535763 MS.gene54951:CDS
GCAGCAATGCAGAGAAGGCC+AGG 0.479876 7.2:-23534072 MS.gene54951:intron
TCGGTGGAGTGGGTGTCAAC+GGG 0.480196 7.2:+23534739 None:intergenic
TTTGCTCGGGGAGTACATCC+TGG 0.485199 7.2:+23534054 None:intergenic
ATGATTTGAATAATTCAAAT+GGG 0.485439 7.2:-23535614 MS.gene54951:CDS
GCAAATTAAAGCAGTGCTGT+TGG 0.486197 7.2:-23534036 MS.gene54951:CDS
CATGAGAAAATTGTCTGGTA+AGG 0.488924 7.2:+23536136 None:intergenic
TTTGGGGCTTAGCAAGTCAC+CGG 0.489029 7.2:+23534683 None:intergenic
TTTCAAACCCCATTTCAAAT+GGG 0.490689 7.2:+23536018 None:intergenic
CTATTGCAATGTCTTGTTCG+TGG 0.492928 7.2:+23536270 None:intergenic
ACAAAACATATGAATGTTGA+CGG 0.497241 7.2:+23534410 None:intergenic
TTGGATTCAGCGGGCTACCA+TGG 0.497757 7.2:-23534017 MS.gene54951:CDS
TCAGAAGCGTCGTGGGGCGT+TGG 0.498023 7.2:-23535778 MS.gene54951:CDS
GTCGGTGGAGTGGGTGTCAA+CGG 0.499586 7.2:+23534738 None:intergenic
ATGAGGGCTTTGGATAACCT+TGG 0.500549 7.2:-23534357 MS.gene54951:CDS
AGGAAACTCAGAAGCTGAAA+GGG 0.502922 7.2:+23535938 None:intergenic
GAAGAAGAAGGAAGTGGTGG+TGG 0.503536 7.2:-23535696 MS.gene54951:CDS
GAGAAAGGTGGAGAAGAGCT+GGG 0.504559 7.2:-23535718 MS.gene54951:CDS
TGTTGTTGTGGTTCAGTCCA+AGG 0.506094 7.2:+23536350 None:intergenic
ATGGACAGGGCTTCAATACT+CGG 0.509966 7.2:-23534876 MS.gene54951:CDS
GAAGCACTGAAAGGTGGTAC+TGG 0.513909 7.2:+23535891 None:intergenic
GGAGGAAGAAACTCAATGAT+AGG 0.514773 7.2:-23535512 MS.gene54951:CDS
AGCTGGGAAGAAGAAGGAAG+TGG 0.518800 7.2:-23535702 MS.gene54951:CDS
TCTCTTCTTCTTGTTCCCCA+CGG 0.521728 7.2:+23535737 None:intergenic
TGGTGCATGAGAAAATTGTC+TGG 0.522663 7.2:+23536131 None:intergenic
ATTATGATTCTGATGAGAAT+GGG 0.525864 7.2:-23535638 MS.gene54951:CDS
ATTTGATGGCTGAGAGGCGC+CGG 0.526012 7.2:-23535533 MS.gene54951:CDS
CAGGGAAGAGTCGGTGGAGT+GGG 0.527264 7.2:+23534729 None:intergenic
GTCAAAGAGGATCTATATCC+CGG 0.532043 7.2:-23534702 MS.gene54951:CDS
GAGGAAACTCAGAAGCTGAA+AGG 0.532923 7.2:+23535937 None:intergenic
TCAGAAGGGGAAGAAGAAGA+AGG 0.533310 7.2:-23535571 MS.gene54951:CDS
TGAACTTGTTGAGGTGGTAA+GGG 0.534290 7.2:+23536389 None:intergenic
ATAATACTCTCACTATACCT+TGG 0.539865 7.2:-23536367 MS.gene54951:CDS
ACAGGTGGAAGTTAGAGTAA+GGG 0.540261 7.2:-23534442 MS.gene54951:intron
AGCAGTGCTGTTGGATTCAG+CGG 0.541017 7.2:-23534027 MS.gene54951:CDS
CAGAAGGGGAAGAAGAAGAA+GGG 0.544979 7.2:-23535570 MS.gene54951:CDS
TGATGATGATGATGTTGTTG+TGG 0.547670 7.2:+23535834 None:intergenic
GTGGAAGTTAGAGTAAGGGA+AGG 0.547671 7.2:-23534438 MS.gene54951:CDS
TCTTAGCAGCAATGCAGAGA+AGG 0.548391 7.2:-23534077 MS.gene54951:intron
GATTCCGAGGTTGGAGACCG+TGG 0.550901 7.2:-23535754 MS.gene54951:CDS
CCAATAACCCATTTGAAATG+GGG 0.552722 7.2:-23536025 MS.gene54951:CDS
AGATGCAGTTGACTACTTGA+AGG 0.553444 7.2:-23534853 MS.gene54951:CDS
TGAAAGCTTGCACTTGCAGA+AGG 0.560535 7.2:+23534762 None:intergenic
CATTGCAATAGCTATTGCTA+TGG 0.561250 7.2:-23536258 MS.gene54951:CDS
AAGGTTATCCAAAGCCCTCA+TGG 0.562752 7.2:+23534359 None:intergenic
TTTAGGTTCGGAGTTAGGTG+TGG 0.567779 7.2:+23536301 None:intergenic
ATTCCGAGGTTGGAGACCGT+GGG 0.568857 7.2:-23535753 MS.gene54951:CDS
TGTTACTGGTGGAGATCAGA+AGG 0.571281 7.2:-23535586 MS.gene54951:CDS
TGGAAGTTAGAGTAAGGGAA+GGG 0.572558 7.2:-23534437 MS.gene54951:CDS
TGTGGTTGAGCTAGCTCAAG+AGG 0.578961 7.2:+23535858 None:intergenic
ATGAGAAAATTGTCTGGTAA+GGG 0.579342 7.2:+23536137 None:intergenic
GAACAAGAAGAAGAGAAAGG+TGG 0.581110 7.2:-23535730 MS.gene54951:CDS
TGGGAAGAAGAAGGAAGTGG+TGG 0.581705 7.2:-23535699 MS.gene54951:CDS
TTAGGTGTGGACCATGAAGA+AGG 0.581820 7.2:+23536314 None:intergenic
GTATTATGAACTTGTTGAGG+TGG 0.581897 7.2:+23536383 None:intergenic
TTGTTGTGAAAGAAAGAGTG+TGG 0.583509 7.2:+23536077 None:intergenic
TCTTCCCTGTCGAGTCAAAG+AGG 0.586826 7.2:-23534715 MS.gene54951:CDS
ACGCTGTTTCAGAAGCGTCG+TGG 0.589420 7.2:-23535786 MS.gene54951:CDS
GGGACCCACCCATGAAAACA+GGG 0.591270 7.2:+23535958 None:intergenic
AGAAGGGGAAGAAGAAGAAG+GGG 0.595564 7.2:-23535569 MS.gene54951:CDS
AATGGGACTGTTGTTACTGG+TGG 0.595592 7.2:-23535597 MS.gene54951:CDS
TTGACTCGACAGGGAAGAGT+CGG 0.596564 7.2:+23534720 None:intergenic
TGATGGCTGAGAGGCGCCGG+AGG 0.599553 7.2:-23535530 MS.gene54951:CDS
ACGCTTCTGAAACAGCGTTG+TGG 0.602187 7.2:+23535791 None:intergenic
ACTTGAAGGAGCTGCTGCAG+CGG 0.611585 7.2:-23534839 MS.gene54951:CDS
ACTCGACAGGGAAGAGTCGG+TGG 0.612573 7.2:+23534723 None:intergenic
CAAAGAATTTGATGGCTGAG+AGG 0.613701 7.2:-23535539 MS.gene54951:CDS
ACAGGGAAGAGTCGGTGGAG+TGG 0.614037 7.2:+23534728 None:intergenic
ATGGTAGATAGCAAAAGTCC+TGG 0.618329 7.2:+23534378 None:intergenic
ATAGAAAACGAAGCACTGAA+AGG 0.618637 7.2:+23535882 None:intergenic
GAACTGGAATCAACTCCACC+TGG 0.619030 7.2:-23534798 MS.gene54951:CDS
GGGGAACAAGAAGAAGAGAA+AGG 0.621823 7.2:-23535733 MS.gene54951:CDS
ACTTCATTCAATTCAAACCA+TGG 0.624434 7.2:+23534000 None:intergenic
GTTACTGGTGGAGATCAGAA+GGG 0.630933 7.2:-23535585 MS.gene54951:CDS
ATTAGACGTGTTCAGAGCTG+AGG 0.631196 7.2:-23534289 MS.gene54951:intron
TGTTGTGCCTAAAATTAGCA+AGG 0.631769 7.2:-23535472 MS.gene54951:intron
TTGGGGCTTAGCAAGTCACC+GGG 0.636110 7.2:+23534684 None:intergenic
GTGGGGCGTTGGAGATTCCG+AGG 0.636781 7.2:-23535767 MS.gene54951:CDS
GAAAACGAAGCACTGAAAGG+TGG 0.640228 7.2:+23535885 None:intergenic
CCTGCTGAACATCCAATCCA+AGG 0.640256 7.2:+23534340 None:intergenic
GCAGTGCTGTTGGATTCAGC+GGG 0.652187 7.2:-23534026 MS.gene54951:CDS
AGATCCTCTTTGACTCGACA+GGG 0.653087 7.2:+23534711 None:intergenic
GCACTGCTTTAATTTGCTCG+GGG 0.667619 7.2:+23534042 None:intergenic
TTACTGGTGGAGATCAGAAG+GGG 0.669179 7.2:-23535584 MS.gene54951:CDS
GGTTGCAGCAGTGAGCCAGG+TGG 0.670958 7.2:+23534783 None:intergenic
GCTGTTTCAGAAGCGTCGTG+GGG 0.673826 7.2:-23535784 MS.gene54951:CDS
AGAGTATTATGAACTTGTTG+AGG 0.689686 7.2:+23536380 None:intergenic
TTCCGAGGTTGGAGACCGTG+GGG 0.692226 7.2:-23535752 MS.gene54951:CDS
GGACCCACCCATGAAAACAG+GGG 0.693712 7.2:+23535959 None:intergenic
GCAGCATCGAGTTCAAGACT+CGG 0.694688 7.2:+23535915 None:intergenic
GCATCGAGTTCAAGACTCGG+AGG 0.717250 7.2:+23535918 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTCATTTATTTTATAGA+TGG - chr7.2:23535519-23535538 MS.gene54951:CDS 10.0%
!!! TAATTTTACTATTTATTCAA+TGG + chr7.2:23535220-23535239 None:intergenic 10.0%
!! AATGATTTGAATAATTCAAA+TGG - chr7.2:23534799-23534818 MS.gene54951:CDS 15.0%
!! ATGATTTGAATAATTCAAAT+GGG - chr7.2:23534800-23534819 MS.gene54951:CDS 15.0%
!! ATTTATATTAACTTCCATTA+AGG - chr7.2:23535031-23535050 MS.gene54951:intron 15.0%
!! TTTACAAAATATTGTGAAAT+TGG - chr7.2:23534980-23534999 MS.gene54951:intron 15.0%
!!! AAAAATGTTATGTTTTTTGA+AGG + chr7.2:23535252-23535271 None:intergenic 15.0%
!!! CATCAAATATTTTTTCTAAA+AGG + chr7.2:23535008-23535027 None:intergenic 15.0%
!! GATTTCTATTATTCAAATCA+AGG + chr7.2:23535280-23535299 None:intergenic 20.0%
!! TAATAATCTTCATAATGAAC+TGG - chr7.2:23535600-23535619 MS.gene54951:CDS 20.0%
!! TGAATAATAGAAATCATGAA+GGG - chr7.2:23535285-23535304 MS.gene54951:intron 20.0%
!! TTGAATAATAGAAATCATGA+AGG - chr7.2:23535284-23535303 MS.gene54951:intron 20.0%
!!! ACTAGTTTTTTGTATTTTGT+TGG - chr7.2:23535323-23535342 MS.gene54951:intron 20.0%
!!! ATTTATTTTATAGATGGACA+GGG - chr7.2:23535525-23535544 MS.gene54951:CDS 20.0%
!!! TTGCTTTTGTAATTTTGTTT+GGG - chr7.2:23535385-23535404 MS.gene54951:intron 20.0%
!!! TTTGAAAATGGATTCTTTAT+GGG - chr7.2:23534412-23534431 MS.gene54951:CDS 20.0%
! AAATTACAAAAGCAACAAGA+TGG + chr7.2:23535380-23535399 None:intergenic 25.0%
! AATGTAAGAAAGGTTTATGA+TGG + chr7.2:23536192-23536211 None:intergenic 25.0%
! AATTATGATTCTGATGAGAA+TGG - chr7.2:23534775-23534794 MS.gene54951:CDS 25.0%
! ACAAAACATATGAATGTTGA+CGG + chr7.2:23536007-23536026 None:intergenic 25.0%
! ATTATGATTCTGATGAGAAT+GGG - chr7.2:23534776-23534795 MS.gene54951:CDS 25.0%
! CAAAAAATTGTTGTCAAATG+CGG - chr7.2:23535098-23535117 MS.gene54951:intron 25.0%
! CATACAGTAAAATGTAAGAA+AGG + chr7.2:23536202-23536221 None:intergenic 25.0%
! TCAATGGCATTTCTAATTAT+AGG + chr7.2:23535204-23535223 None:intergenic 25.0%
! TTCACTAATTATTGGATTTC+TGG - chr7.2:23536293-23536312 MS.gene54951:CDS 25.0%
!! AATGTTGTTGCTTATGTTAT+TGG - chr7.2:23535424-23535443 MS.gene54951:intron 25.0%
!! GTTTGAAAATGGATTCTTTA+TGG - chr7.2:23534411-23534430 MS.gene54951:CDS 25.0%
!! TGGATTTGAAATTGAATCTA+TGG + chr7.2:23534320-23534339 None:intergenic 25.0%
!!! ATTTCGAGTTCACTAATTAT+TGG - chr7.2:23536285-23536304 MS.gene54951:CDS 25.0%
!!! CATTTATTTTATAGATGGAC+AGG - chr7.2:23535524-23535543 MS.gene54951:CDS 25.0%
!!! GTTGCTTTTGTAATTTTGTT+TGG - chr7.2:23535384-23535403 MS.gene54951:intron 25.0%
!!! TCCATTAAGGTTTTAAATTG+CGG - chr7.2:23535044-23535063 MS.gene54951:intron 25.0%
!!! TGCTTTTGTAATTTTGTTTG+GGG - chr7.2:23535386-23535405 MS.gene54951:intron 25.0%
!!! TTCTTGTTTCTGAAATTTAC+AGG - chr7.2:23535954-23535973 MS.gene54951:CDS 25.0%
AAATAGAACGTGCTAATGTT+AGG - chr7.2:23535486-23535505 MS.gene54951:CDS 30.0%
AAGGCAAACAAAAATTACCT+TGG + chr7.2:23535767-23535786 None:intergenic 30.0%
AATTATTTGGACGGTAATTG+AGG - chr7.2:23535917-23535936 MS.gene54951:CDS 30.0%
ACATGGCAAATAACTGAATA+AGG - chr7.2:23535881-23535900 MS.gene54951:CDS 30.0%
AGGCAAACAAAAATTACCTT+GGG + chr7.2:23535766-23535785 None:intergenic 30.0%
ATAATACTCTCACTATACCT+TGG - chr7.2:23534047-23534066 MS.gene54951:CDS 30.0%
ATGAGAAAATTGTCTGGTAA+GGG + chr7.2:23534280-23534299 None:intergenic 30.0%
ATGATAGGTTGTATATGCTT+AGG - chr7.2:23534917-23534936 MS.gene54951:intron 30.0%
CACAAAAAACAACCTAAAAG+AGG + chr7.2:23536246-23536265 None:intergenic 30.0%
CATGGCAAATAACTGAATAA+GGG - chr7.2:23535882-23535901 MS.gene54951:CDS 30.0%
CATGTTACTGGTATAGATAA+AGG + chr7.2:23535866-23535885 None:intergenic 30.0%
CTTAAAACAACTTCGCATTA+AGG + chr7.2:23535786-23535805 None:intergenic 30.0%
CTTTATCTATACCAGTAACA+TGG - chr7.2:23535864-23535883 MS.gene54951:CDS 30.0%
GTACGTTGATGCAAATTATT+TGG - chr7.2:23535904-23535923 MS.gene54951:CDS 30.0%
GTTGATGCAAATTATTTGGA+CGG - chr7.2:23535908-23535927 MS.gene54951:CDS 30.0%
TACCAATAACCCATTTGAAA+TGG - chr7.2:23534387-23534406 MS.gene54951:CDS 30.0%
TTTCAAACCCCATTTCAAAT+GGG + chr7.2:23534399-23534418 None:intergenic 30.0%
! AAGTTGTTGTTGTTGTTATC+AGG + chr7.2:23534214-23534233 None:intergenic 30.0%
! AATCTATGGTGTTTGTGTTT+TGG + chr7.2:23534306-23534325 None:intergenic 30.0%
! ACCAATAACCCATTTGAAAT+GGG - chr7.2:23534388-23534407 MS.gene54951:CDS 30.0%
! ACCGCAATTTAAAACCTTAA+TGG + chr7.2:23535048-23535067 None:intergenic 30.0%
! GATGTTTATATGCCTCTTTT+AGG - chr7.2:23536231-23536250 MS.gene54951:CDS 30.0%
! GTTTGTGACAATAATTTGCA+TGG + chr7.2:23535842-23535861 None:intergenic 30.0%
! TACCATACCTTGCTAATTTT+AGG + chr7.2:23534952-23534971 None:intergenic 30.0%
! TTTGAAATGGGGTTTGAAAA+TGG - chr7.2:23534400-23534419 MS.gene54951:CDS 30.0%
! TTTTCAAACCCCATTTCAAA+TGG + chr7.2:23534400-23534419 None:intergenic 30.0%
! TTTTTATGTGACCGTGATTA+AGG + chr7.2:23535133-23535152 None:intergenic 30.0%
!! AGAGTATTATGAACTTGTTG+AGG + chr7.2:23534037-23534056 None:intergenic 30.0%
!! TTGTTTCTGAAATTTACAGG+TGG - chr7.2:23535957-23535976 MS.gene54951:CDS 30.0%
AACAAGAATCACCTTCTTCA+TGG - chr7.2:23534089-23534108 MS.gene54951:intron 35.0%
CAAAAATTACCTTGGGAGAT+TGG + chr7.2:23535759-23535778 None:intergenic 35.0%
CATGAGAAAATTGTCTGGTA+AGG + chr7.2:23534281-23534300 None:intergenic 35.0%
CATTGCAATAGCTATTGCTA+TGG - chr7.2:23534156-23534175 MS.gene54951:intron 35.0%
TATCATTGAGTTTCTTCCTC+CGG + chr7.2:23534903-23534922 None:intergenic 35.0%
TCAGTTATTTGCCATGTTAC+TGG + chr7.2:23535878-23535897 None:intergenic 35.0%
TGCCTAAAATTAGCAAGGTA+TGG - chr7.2:23534947-23534966 MS.gene54951:intron 35.0%
TGTTGTGCCTAAAATTAGCA+AGG - chr7.2:23534942-23534961 MS.gene54951:intron 35.0%
TTGTTGTGAAAGAAAGAGTG+TGG + chr7.2:23534340-23534359 None:intergenic 35.0%
! CCAATAACCCATTTGAAATG+GGG - chr7.2:23534389-23534408 MS.gene54951:CDS 35.0%
! GCTGTTATCAGTTGTTTCAA+TGG - chr7.2:23536096-23536115 MS.gene54951:CDS 35.0%
! GTTGTTGTTGTTATCAGGTT+CGG + chr7.2:23534209-23534228 None:intergenic 35.0%
! TCAAATTCCCCTGTTTTCAT+GGG - chr7.2:23534448-23534467 MS.gene54951:intron 35.0%
! TGAGGTATTAGTTCTTTCTC+CGG - chr7.2:23536143-23536162 MS.gene54951:CDS 35.0%
! TGATGATGATGATGTTGTTG+TGG + chr7.2:23534583-23534602 None:intergenic 35.0%
! TTCAAATTCCCCTGTTTTCA+TGG - chr7.2:23534447-23534466 MS.gene54951:intron 35.0%
! TTGTTGTTGTTATCAGGTTC+GGG + chr7.2:23534208-23534227 None:intergenic 35.0%
!! ACTTTTGCTATCTACCATGA+GGG - chr7.2:23536041-23536060 MS.gene54951:CDS 35.0%
!! ATAGAAAACGAAGCACTGAA+AGG + chr7.2:23534535-23534554 None:intergenic 35.0%
!! GATTCTTGTTGTTGTTGTTG+TGG + chr7.2:23534079-23534098 None:intergenic 35.0%
!! GTATTATGAACTTGTTGAGG+TGG + chr7.2:23534034-23534053 None:intergenic 35.0%
ACAGGTGGAAGTTAGAGTAA+GGG - chr7.2:23535972-23535991 MS.gene54951:CDS 40.0%
AGATGCAGTTGACTACTTGA+AGG - chr7.2:23535561-23535580 MS.gene54951:CDS 40.0%
AGGAAACTCAGAAGCTGAAA+GGG + chr7.2:23534479-23534498 None:intergenic 40.0%
ATGGTAGATAGCAAAAGTCC+TGG + chr7.2:23536039-23536058 None:intergenic 40.0%
GAACAAGAAGAAGAGAAAGG+TGG - chr7.2:23534684-23534703 MS.gene54951:CDS 40.0%
GCAAATTAAAGCAGTGCTGT+TGG - chr7.2:23536378-23536397 MS.gene54951:CDS 40.0%
GCTTCCTGCAAAGAATTTGA+TGG - chr7.2:23534867-23534886 MS.gene54951:CDS 40.0%
GGAGGAAGAAACTCAATGAT+AGG - chr7.2:23534902-23534921 MS.gene54951:intron 40.0%
GTCAAAGAGGATCTATATCC+CGG - chr7.2:23535712-23535731 MS.gene54951:CDS 40.0%
GTTTGGGGAATCTAGTGTTT+GGG - chr7.2:23535401-23535420 MS.gene54951:intron 40.0%
TACAGGTGGAAGTTAGAGTA+AGG - chr7.2:23535971-23535990 MS.gene54951:CDS 40.0%
TCAAATGGGACTGTTGTTAC+TGG - chr7.2:23534814-23534833 MS.gene54951:CDS 40.0%
TCAGCCATCAAATTCTTTGC+AGG + chr7.2:23534874-23534893 None:intergenic 40.0%
TGGAAGTTAGAGTAAGGGAA+GGG - chr7.2:23535977-23535996 MS.gene54951:CDS 40.0%
TGGTGCATGAGAAAATTGTC+TGG + chr7.2:23534286-23534305 None:intergenic 40.0%
TGTTCGTGGTTGTTGTGTTT+AGG + chr7.2:23534133-23534152 None:intergenic 40.0%
TGTTTGGGGAATCTAGTGTT+TGG - chr7.2:23535400-23535419 MS.gene54951:intron 40.0%
TTAAATTGCGGTCGCAGTAA+TGG - chr7.2:23535056-23535075 MS.gene54951:intron 40.0%
! CAAAGAATTTGATGGCTGAG+AGG - chr7.2:23534875-23534894 MS.gene54951:CDS 40.0%
! CTATTGCAATGTCTTGTTCG+TGG + chr7.2:23534147-23534166 None:intergenic 40.0%
! GGTTGATGTAGCCTTAATCA+CGG - chr7.2:23535119-23535138 MS.gene54951:intron 40.0%
! GTGGTTGTTGTGTTTAGGTT+CGG + chr7.2:23534128-23534147 None:intergenic 40.0%
! TGATGATGTTGTTGTGGTTG+TGG + chr7.2:23534577-23534596 None:intergenic 40.0%
! TTGTGTTTAGGTTCGGAGTT+AGG + chr7.2:23534121-23534140 None:intergenic 40.0%
!! AGCACTGCTTTAATTTGCTC+GGG + chr7.2:23536376-23536395 None:intergenic 40.0%
!! ATGAACTTGTTGAGGTGGTA+AGG + chr7.2:23534029-23534048 None:intergenic 40.0%
!! CAGCACTGCTTTAATTTGCT+CGG + chr7.2:23536377-23536396 None:intergenic 40.0%
!! CCCCATTTCAAATGGGTTAT+TGG + chr7.2:23534392-23534411 None:intergenic 40.0%
!! GACTTTTGCTATCTACCATG+AGG - chr7.2:23536040-23536059 MS.gene54951:CDS 40.0%
!! TGAACTTGTTGAGGTGGTAA+GGG + chr7.2:23534028-23534047 None:intergenic 40.0%
!!! ACCTTGGGAGATTGGTTTTT+GGG + chr7.2:23535751-23535770 None:intergenic 40.0%
!!! TACCTTGGGAGATTGGTTTT+TGG + chr7.2:23535752-23535771 None:intergenic 40.0%
AAGGTTATCCAAAGCCCTCA+TGG + chr7.2:23536058-23536077 None:intergenic 45.0%
AATGGGACTGTTGTTACTGG+TGG - chr7.2:23534817-23534836 MS.gene54951:CDS 45.0%
AGAAGGGGAAGAAGAAGAAG+GGG - chr7.2:23534845-23534864 MS.gene54951:CDS 45.0%
ATGGACAGGGCTTCAATACT+CGG - chr7.2:23535538-23535557 MS.gene54951:CDS 45.0%
ATTAGACGTGTTCAGAGCTG+AGG - chr7.2:23536125-23536144 MS.gene54951:CDS 45.0%
CAGAAGGGGAAGAAGAAGAA+GGG - chr7.2:23534844-23534863 MS.gene54951:CDS 45.0%
GAGGAAACTCAGAAGCTGAA+AGG + chr7.2:23534480-23534499 None:intergenic 45.0%
GCAATAGCTATTGCTATGGC+TGG - chr7.2:23534160-23534179 MS.gene54951:intron 45.0%
GGCATCACACAAGCATTTCA+AGG + chr7.2:23535359-23535378 None:intergenic 45.0%
GGGGAACAAGAAGAAGAGAA+AGG - chr7.2:23534681-23534700 MS.gene54951:CDS 45.0%
GTGGAAGTTAGAGTAAGGGA+AGG - chr7.2:23535976-23535995 MS.gene54951:CDS 45.0%
GTTACTGGTGGAGATCAGAA+GGG - chr7.2:23534829-23534848 MS.gene54951:CDS 45.0%
GTTTGAGTGAAGCTTGCAAC+CGG + chr7.2:23536165-23536184 None:intergenic 45.0%
TCAGAAGGGGAAGAAGAAGA+AGG - chr7.2:23534843-23534862 MS.gene54951:CDS 45.0%
TCTCTTCTTCTTGTTCCCCA+CGG + chr7.2:23534680-23534699 None:intergenic 45.0%
TCTTAGCAGCAATGCAGAGA+AGG - chr7.2:23536337-23536356 MS.gene54951:CDS 45.0%
TGAAAGCTTGCACTTGCAGA+AGG + chr7.2:23535655-23535674 None:intergenic 45.0%
TGTTACTGGTGGAGATCAGA+AGG - chr7.2:23534828-23534847 MS.gene54951:CDS 45.0%
TGTTGTTGTGGTTCAGTCCA+AGG + chr7.2:23534067-23534086 None:intergenic 45.0%
TTACTGGTGGAGATCAGAAG+GGG - chr7.2:23534830-23534849 MS.gene54951:CDS 45.0%
TTAGGTGTGGACCATGAAGA+AGG + chr7.2:23534103-23534122 None:intergenic 45.0%
! AATTCCCCTGTTTTCATGGG+TGG - chr7.2:23534451-23534470 MS.gene54951:intron 45.0%
! AGATCCTCTTTGACTCGACA+GGG + chr7.2:23535706-23535725 None:intergenic 45.0%
! ATGTTTTGTACTCGCAGACC+AGG - chr7.2:23536018-23536037 MS.gene54951:CDS 45.0%
! ATTCCCCTGTTTTCATGGGT+GGG - chr7.2:23534452-23534471 MS.gene54951:intron 45.0%
! CAGGTTCGGGTTTGAAGAAA+GGG + chr7.2:23534195-23534214 None:intergenic 45.0%
! TAGATCCTCTTTGACTCGAC+AGG + chr7.2:23535707-23535726 None:intergenic 45.0%
! TCAGGTTCGGGTTTGAAGAA+AGG + chr7.2:23534196-23534215 None:intergenic 45.0%
! TTTAGGTTCGGAGTTAGGTG+TGG + chr7.2:23534116-23534135 None:intergenic 45.0%
!! ATGAGGGCTTTGGATAACCT+TGG - chr7.2:23536057-23536076 MS.gene54951:CDS 45.0%
!! GAAAACGAAGCACTGAAAGG+TGG + chr7.2:23534532-23534551 None:intergenic 45.0%
!! GCACTGCTTTAATTTGCTCG+GGG + chr7.2:23536375-23536394 None:intergenic 45.0%
!! GGCTTTGGATAACCTTGGAT+TGG - chr7.2:23536062-23536081 MS.gene54951:CDS 45.0%
!!! CCTTGGGAGATTGGTTTTTG+GGG + chr7.2:23535750-23535769 None:intergenic 45.0%
AGAGAAAGGTGGAGAAGAGC+TGG - chr7.2:23534695-23534714 MS.gene54951:CDS 50.0%
AGCTGGGAAGAAGAAGGAAG+TGG - chr7.2:23534712-23534731 MS.gene54951:CDS 50.0%
CCCCAAAAACCAATCTCCCA+AGG - chr7.2:23535747-23535766 MS.gene54951:CDS 50.0%
CCTGCTGAACATCCAATCCA+AGG + chr7.2:23536077-23536096 None:intergenic 50.0%
GAACTGGAATCAACTCCACC+TGG - chr7.2:23535616-23535635 MS.gene54951:CDS 50.0%
GAAGAAGAAGGAAGTGGTGG+TGG - chr7.2:23534718-23534737 MS.gene54951:CDS 50.0%
GAGAAAGGTGGAGAAGAGCT+GGG - chr7.2:23534696-23534715 MS.gene54951:CDS 50.0%
GAGAAGAGCTGGGAAGAAGA+AGG - chr7.2:23534706-23534725 MS.gene54951:CDS 50.0%
GCTATCTACCATGAGGGCTT+TGG - chr7.2:23536047-23536066 MS.gene54951:CDS 50.0%
TCTTCCCTGTCGAGTCAAAG+AGG - chr7.2:23535699-23535718 MS.gene54951:CDS 50.0%
TGGGAAGAAGAAGGAAGTGG+TGG - chr7.2:23534715-23534734 MS.gene54951:CDS 50.0%
TGTGGTTGAGCTAGCTCAAG+AGG + chr7.2:23534559-23534578 None:intergenic 50.0%
! AGCAGTGCTGTTGGATTCAG+CGG - chr7.2:23536387-23536406 MS.gene54951:CDS 50.0%
! CCTTGGATTGGATGTTCAGC+AGG - chr7.2:23536074-23536093 MS.gene54951:CDS 50.0%
! GCAGCATCGAGTTCAAGACT+CGG + chr7.2:23534502-23534521 None:intergenic 50.0%
! TTGACTCGACAGGGAAGAGT+CGG + chr7.2:23535697-23535716 None:intergenic 50.0%
! TTTGGGGCTTAGCAAGTCAC+CGG + chr7.2:23535734-23535753 None:intergenic 50.0%
!! ACGCTTCTGAAACAGCGTTG+TGG + chr7.2:23534626-23534645 None:intergenic 50.0%
!! CGCTTCTGAAACAGCGTTGT+GGG + chr7.2:23534625-23534644 None:intergenic 50.0%
!! GAAGCACTGAAAGGTGGTAC+TGG + chr7.2:23534526-23534545 None:intergenic 50.0%
ACTTGAAGGAGCTGCTGCAG+CGG - chr7.2:23535575-23535594 MS.gene54951:CDS 55.0%
AGGGACCCACCCATGAAAAC+AGG + chr7.2:23534460-23534479 None:intergenic 55.0%
ATTCCGAGGTTGGAGACCGT+GGG - chr7.2:23534661-23534680 MS.gene54951:intron 55.0%
GCATCGAGTTCAAGACTCGG+AGG + chr7.2:23534499-23534518 None:intergenic 55.0%
GGACCCACCCATGAAAACAG+GGG + chr7.2:23534458-23534477 None:intergenic 55.0%
GGGACCCACCCATGAAAACA+GGG + chr7.2:23534459-23534478 None:intergenic 55.0%
TTGGGGCTTAGCAAGTCACC+GGG + chr7.2:23535733-23535752 None:intergenic 55.0%
! ATTTGATGGCTGAGAGGCGC+CGG - chr7.2:23534881-23534900 MS.gene54951:intron 55.0%
! GCAGTGCTGTTGGATTCAGC+GGG - chr7.2:23536388-23536407 MS.gene54951:CDS 55.0%
! TTTGCTCGGGGAGTACATCC+TGG + chr7.2:23536363-23536382 None:intergenic 55.0%
!! ACGCTGTTTCAGAAGCGTCG+TGG - chr7.2:23534628-23534647 MS.gene54951:intron 55.0%
!! CGCTGTTTCAGAAGCGTCGT+GGG - chr7.2:23534629-23534648 MS.gene54951:intron 55.0%
!! GAAGAAGGAAGTGGTGGTGG+TGG - chr7.2:23534721-23534740 MS.gene54951:CDS 55.0%
!! GCTGTTTCAGAAGCGTCGTG+GGG - chr7.2:23534630-23534649 MS.gene54951:intron 55.0%
!! TTGGATTCAGCGGGCTACCA+TGG - chr7.2:23536397-23536416 MS.gene54951:CDS 55.0%
ACAGGGAAGAGTCGGTGGAG+TGG + chr7.2:23535689-23535708 None:intergenic 60.0%
ACTCGACAGGGAAGAGTCGG+TGG + chr7.2:23535694-23535713 None:intergenic 60.0%
CAGGGAAGAGTCGGTGGAGT+GGG + chr7.2:23535688-23535707 None:intergenic 60.0%
GAAGGTTGCAGCAGTGAGCC+AGG + chr7.2:23535637-23535656 None:intergenic 60.0%
GATTCCGAGGTTGGAGACCG+TGG - chr7.2:23534660-23534679 MS.gene54951:intron 60.0%
GCAGCAATGCAGAGAAGGCC+AGG - chr7.2:23536342-23536361 MS.gene54951:CDS 60.0%
GTCGGTGGAGTGGGTGTCAA+CGG + chr7.2:23535679-23535698 None:intergenic 60.0%
TCGGTGGAGTGGGTGTCAAC+GGG + chr7.2:23535678-23535697 None:intergenic 60.0%
TTCCCCACGGTCTCCAACCT+CGG + chr7.2:23534667-23534686 None:intergenic 60.0%
TTCCGAGGTTGGAGACCGTG+GGG - chr7.2:23534662-23534681 MS.gene54951:intron 60.0%
! GGCGTTGGAGATTCCGAGGT+TGG - chr7.2:23534651-23534670 MS.gene54951:intron 60.0%
!! GAAGGAAGTGGTGGTGGTGG+TGG - chr7.2:23534724-23534743 MS.gene54951:CDS 60.0%
GGTTGCAGCAGTGAGCCAGG+TGG + chr7.2:23535634-23535653 None:intergenic 65.0%
!! GTGGGGCGTTGGAGATTCCG+AGG - chr7.2:23534647-23534666 MS.gene54951:intron 65.0%
!! TCAGAAGCGTCGTGGGGCGT+TGG - chr7.2:23534636-23534655 MS.gene54951:intron 65.0%
!! TGATGGCTGAGAGGCGCCGG+AGG - chr7.2:23534884-23534903 MS.gene54951:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 23534007 23536429 23534007 ID=MS.gene54951
chr7.2 mRNA 23534007 23536429 23534007 ID=MS.gene54951.t1;Parent=MS.gene54951
chr7.2 exon 23535473 23536429 23535473 ID=MS.gene54951.t1.exon1;Parent=MS.gene54951.t1
chr7.2 CDS 23535473 23536429 23535473 ID=cds.MS.gene54951.t1;Parent=MS.gene54951.t1
chr7.2 exon 23534668 23534898 23534668 ID=MS.gene54951.t1.exon2;Parent=MS.gene54951.t1
chr7.2 CDS 23534668 23534898 23534668 ID=cds.MS.gene54951.t1;Parent=MS.gene54951.t1
chr7.2 exon 23534290 23534460 23534290 ID=MS.gene54951.t1.exon3;Parent=MS.gene54951.t1
chr7.2 CDS 23534290 23534460 23534290 ID=cds.MS.gene54951.t1;Parent=MS.gene54951.t1
chr7.2 exon 23534007 23534090 23534007 ID=MS.gene54951.t1.exon4;Parent=MS.gene54951.t1
chr7.2 CDS 23534007 23534090 23534007 ID=cds.MS.gene54951.t1;Parent=MS.gene54951.t1
Gene Sequence

>MS.gene54951

ATGGAGAGATACACGTTACCCTTACCACCTCAACAAGTTCATAATACTCTCACTATACCTTGGACTGAACCACAACAACAACAACAAGAATCACCTTCTTCATGGTCCACACCTAACTCCGAACCTAAACACAACAACCACGAACAAGACATTGCAATAGCTATTGCTATGGCTGGTTCTTCTATCCCTTTCTTCAAACCCGAACCTGATAACAACAACAACAACTTCTACAACAACAACAACAACGTTGTTAATGTTAATAATGTTATTCCCTTACCAGACAATTTTCTCATGCACCAAAACACAAACACCATAGATTCAATTTCAAATCCACACTCTTTCTTTCACAACAATAACAACTACTTCTTCAACAACAATAATACCAATAACCCATTTGAAATGGGGTTTGAAAATGGATTCTTTATGGGAAACAACAACACTTCAAATTCCCCTGTTTTCATGGGTGGGTCCCTTTCAGCTTCTGAGTTTCCTCCGAGTCTTGAACTCGATGCTGCTCCAGTACCACCTTTCAGTGCTTCGTTTTCTATGCCTCTTGAGCTAGCTCAACCACAACCACAACAACATCATCATCATCAGCAACAACAACAACAACAACCCACAACGCTGTTTCAGAAGCGTCGTGGGGCGTTGGAGATTCCGAGGTTGGAGACCGTGGGGAACAAGAAGAAGAGAAAGGTGGAGAAGAGCTGGGAAGAAGAAGGAAGTGGTGGTGGTGGTGGTGATGATGTTGATGATTTTTCTGAGTTGAATTATGATTCTGATGAGAATGGGAATGATTTGAATAATTCAAATGGGACTGTTGTTACTGGTGGAGATCAGAAGGGGAAGAAGAAGAAGGGGCTTCCTGCAAAGAATTTGATGGCTGAGAGGCGCCGGAGGAAGAAACTCAATGATAGGTTGTATATGCTTAGGTCTGTTGTGCCTAAAATTAGCAAGGTATGGTAGAGATTTATTTACAAAATATTGTGAAATTGGATCCTTTTAGAAAAAATATTTGATGCATATTTATATTAACTTCCATTAAGGTTTTAAATTGCGGTCGCAGTAATGGATTGTGATTCTTGATATTGCAAAAAATTGTTGTCAAATGCGGTTGATGTAGCCTTAATCACGGTCACATAAAAATAAAAATCTTATCTTGATGTCTCATGTCTTTAGACAGAATCAATGTCTCCTATAATTAGAAATGCCATTGAATAAATAGTAAAATTAGTTTTTTTTCCTTCAAAAAACATAACATTTTTGTAGTCCTTGATTTGAATAATAGAAATCATGAAGGGAATTTTATTTATCAAACTAGTTTTTTGTATTTTGTTGGTCTAATTAGTCCTTGAAATGCTTGTGTGATGCCATCTTGTTGCTTTTGTAATTTTGTTTGGGGAATCTAGTGTTTGGGAATGTTGTTGCTTATGTTATTGGCAAGTGTTGCATTTGCTTTGTGTTAATTAACAACTTAGAAAATAGAACGTGCTAATGTTAGGTATTTTCATAAATTTCATTTATTTTATAGATGGACAGGGCTTCAATACTCGGAGATGCAGTTGACTACTTGAAGGAGCTGCTGCAGCGGATTAATAATCTTCATAATGAACTGGAATCAACTCCACCTGGCTCACTGCTGCAACCTTCTGCAAGTGCAAGCTTTCACCCGTTGACACCCACTCCACCGACTCTTCCCTGTCGAGTCAAAGAGGATCTATATCCCGGTGACTTGCTAAGCCCCAAAAACCAATCTCCCAAGGTAATTTTTGTTTGCCTTAATGCGAAGTTGTTTTAAGATACTGTCAGAATTGTAGTTTGTTGCTTGCAAACCATGCAAATTATTGTCACAAACGCCTTTATCTATACCAGTAACATGGCAAATAACTGAATAAGGGTACGTTGATGCAAATTATTTGGACGGTAATTGAGGAAATTGTTTAAACTTTCTTGTTTCTGAAATTTACAGGTGGAAGTTAGAGTAAGGGAAGGGAGAGCCGTCAACATTCATATGTTTTGTACTCGCAGACCAGGACTTTTGCTATCTACCATGAGGGCTTTGGATAACCTTGGATTGGATGTTCAGCAGGCTGTTATCAGTTGTTTCAATGGCTTTGCATTAGACGTGTTCAGAGCTGAGGTATTAGTTCTTTCTCCGGTTGCAAGCTTCACTCAAACATATCCATCATAAACCTTTCTTACATTTTACTGTATGCTTGCAATTGATGTTTATATGCCTCTTTTAGGTTGTTTTTTGTGAAGTATTTTGAGTTTAAATATTTCGAGTTCACTAATTATTGGATTTCTGGTGTTGATTTAGTCTTTTTGTTTCTTAGCAGCAATGCAGAGAAGGCCAGGATGTACTCCCCGAGCAAATTAAAGCAGTGCTGTTGGATTCAGCGGGCTACCATGGTTTGAATTGA

Protein sequence

>MS.gene54951.t1

MERYTLPLPPQQVHNTLTIPWTEPQQQQQESPSSWSTPNSEPKHNNHEQDIAIAIAMAGSSIPFFKPEPDNNNNNFYNNNNNVVNVNNVIPLPDNFLMHQNTNTIDSISNPHSFFHNNNNYFFNNNNTNNPFEMGFENGFFMGNNNTSNSPVFMGGSLSASEFPPSLELDAAPVPPFSASFSMPLELAQPQPQQHHHHQQQQQQQPTTLFQKRRGALEIPRLETVGNKKKRKVEKSWEEEGSGGGGGDDVDDFSELNYDSDENGNDLNNSNGTVVTGGDQKGKKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAVDYLKELLQRINNLHNELESTPPGSLLQPSASASFHPLTPTPPTLPCRVKEDLYPGDLLSPKNQSPKVEVRVREGRAVNIHMFCTRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCREGQDVLPEQIKAVLLDSAGYHGLN