Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60304.t1 | XP_013457868.1 | 98.8 | 416 | 5 | 0 | 10 | 425 | 1223 | 1638 | 1.40E-241 | 845.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60304.t1 | Q8BL06 | 30.9 | 343 | 198 | 12 | 93 | 421 | 32 | 349 | 4.5e-31 | 137.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60304.t1 | A0A072UQ21 | 98.8 | 416 | 5 | 0 | 10 | 425 | 1223 | 1638 | 1.0e-241 | 845.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene60304 | 0.838405 | 2.93E-57 | -1.69E-46 |
| MS.gene049159 | MS.gene60304 | 0.806613 | 7.56E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene60304 | 0.829408 | 5.24E-55 | -1.69E-46 |
| MS.gene049368 | MS.gene60304 | 0.843914 | 1.05E-58 | -1.69E-46 |
| MS.gene049499 | MS.gene60304 | 0.815738 | 7.93E-52 | -1.69E-46 |
| MS.gene049807 | MS.gene60304 | 0.806478 | 8.07E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene60304 | 0.857378 | 1.70E-62 | -1.69E-46 |
| MS.gene050084 | MS.gene60304 | 0.826482 | 2.65E-54 | -1.69E-46 |
| MS.gene050085 | MS.gene60304 | 0.84597 | 2.91E-59 | -1.69E-46 |
| MS.gene050213 | MS.gene60304 | 0.824675 | 7.10E-54 | -1.69E-46 |
| MS.gene050224 | MS.gene60304 | 0.806383 | 8.45E-50 | -1.69E-46 |
| MS.gene050359 | MS.gene60304 | 0.847372 | 1.21E-59 | -1.69E-46 |
| MS.gene050384 | MS.gene60304 | 0.808308 | 3.30E-50 | -1.69E-46 |
| MS.gene050386 | MS.gene60304 | 0.808568 | 2.91E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene60304 | 0.837859 | 4.05E-57 | -1.69E-46 |
| MS.gene050551 | MS.gene60304 | 0.855923 | 4.55E-62 | -1.69E-46 |
| MS.gene050646 | MS.gene60304 | 0.864535 | 1.13E-64 | -1.69E-46 |
| MS.gene050654 | MS.gene60304 | 0.872523 | 2.98E-67 | -1.69E-46 |
| MS.gene050689 | MS.gene60304 | 0.826682 | 2.37E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene60304 | 0.800336 | 1.51E-48 | -1.69E-46 |
| MS.gene050931 | MS.gene60304 | 0.815085 | 1.11E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene60304 | 0.831831 | 1.34E-55 | -1.69E-46 |
| MS.gene051003 | MS.gene60304 | 0.820463 | 6.77E-53 | -1.69E-46 |
| MS.gene051043 | MS.gene60304 | 0.819492 | 1.13E-52 | -1.69E-46 |
| MS.gene051102 | MS.gene60304 | 0.809545 | 1.79E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene60304 | 0.800306 | 1.53E-48 | -1.69E-46 |
| MS.gene051209 | MS.gene60304 | 0.827004 | 1.99E-54 | -1.69E-46 |
| MS.gene051234 | MS.gene60304 | 0.815979 | 7.00E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene60304 | 0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene051365 | MS.gene60304 | 0.821304 | 4.33E-53 | -1.69E-46 |
| MS.gene051381 | MS.gene60304 | 0.84932 | 3.49E-60 | -1.69E-46 |
| MS.gene051382 | MS.gene60304 | 0.801744 | 7.79E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene60304 | 0.826377 | 2.80E-54 | -1.69E-46 |
| MS.gene052052 | MS.gene60304 | 0.807384 | 5.19E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene60304 | 0.837476 | 5.08E-57 | -1.69E-46 |
| MS.gene052307 | MS.gene60304 | 0.883903 | 3.02E-71 | -1.69E-46 |
| MS.gene052335 | MS.gene60304 | 0.810678 | 1.02E-50 | -1.69E-46 |
| MS.gene052342 | MS.gene60304 | 0.838287 | 3.14E-57 | -1.69E-46 |
| MS.gene052434 | MS.gene60304 | 0.802677 | 5.01E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene60304 | 0.827444 | 1.56E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene60304 | 0.806787 | 6.94E-50 | -1.69E-46 |
| MS.gene052518 | MS.gene60304 | 0.816182 | 6.31E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene60304 | 0.881756 | 1.84E-70 | -1.69E-46 |
| MS.gene052775 | MS.gene60304 | 0.809425 | 1.90E-50 | -1.69E-46 |
| MS.gene052776 | MS.gene60304 | 0.817021 | 4.09E-52 | -1.69E-46 |
| MS.gene052932 | MS.gene60304 | 0.829743 | 4.34E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene60304 | 0.803146 | 4.01E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene60304 | 0.848157 | 7.33E-60 | -1.69E-46 |
| MS.gene053143 | MS.gene60304 | 0.82138 | 4.16E-53 | -1.69E-46 |
| MS.gene053456 | MS.gene60304 | 0.811878 | 5.62E-51 | -1.69E-46 |
| MS.gene05350 | MS.gene60304 | 0.845175 | 4.78E-59 | -1.69E-46 |
| MS.gene05364 | MS.gene60304 | 0.80093 | 1.14E-48 | -1.69E-46 |
| MS.gene054479 | MS.gene60304 | 0.819545 | 1.10E-52 | -1.69E-46 |
| MS.gene05458 | MS.gene60304 | 0.802685 | 4.99E-49 | -1.69E-46 |
| MS.gene054641 | MS.gene60304 | 0.803375 | 3.59E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene60304 | 0.803836 | 2.88E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene60304 | 0.806318 | 8.72E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene60304 | 0.814885 | 1.23E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene60304 | 0.818924 | 1.52E-52 | -1.69E-46 |
| MS.gene055314 | MS.gene60304 | 0.807191 | 5.70E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene60304 | 0.842611 | 2.33E-58 | -1.69E-46 |
| MS.gene055864 | MS.gene60304 | 0.837349 | 5.48E-57 | -1.69E-46 |
| MS.gene056045 | MS.gene60304 | 0.865194 | 7.05E-65 | -1.69E-46 |
| MS.gene056097 | MS.gene60304 | 0.836839 | 7.40E-57 | -1.69E-46 |
| MS.gene056181 | MS.gene60304 | 0.861706 | 8.50E-64 | -1.69E-46 |
| MS.gene056308 | MS.gene60304 | 0.834745 | 2.51E-56 | -1.69E-46 |
| MS.gene056390 | MS.gene60304 | 0.803388 | 3.57E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene60304 | 0.816854 | 4.46E-52 | -1.69E-46 |
| MS.gene056519 | MS.gene60304 | 0.810054 | 1.39E-50 | -1.69E-46 |
| MS.gene056578 | MS.gene60304 | 0.835426 | 1.69E-56 | -1.69E-46 |
| MS.gene056786 | MS.gene60304 | 0.805539 | 1.27E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene60304 | 0.806249 | 9.02E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene60304 | 0.81535 | 9.67E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene60304 | 0.801647 | 8.16E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene60304 | 0.805226 | 1.48E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene60304 | 0.821865 | 3.22E-53 | -1.69E-46 |
| MS.gene058081 | MS.gene60304 | 0.821928 | 3.11E-53 | -1.69E-46 |
| MS.gene058278 | MS.gene60304 | 0.827224 | 1.76E-54 | -1.69E-46 |
| MS.gene058292 | MS.gene60304 | 0.839324 | 1.70E-57 | -1.69E-46 |
| MS.gene058330 | MS.gene60304 | 0.802135 | 6.48E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene60304 | 0.815512 | 8.90E-52 | -1.69E-46 |
| MS.gene058638 | MS.gene60304 | 0.817209 | 3.71E-52 | -1.69E-46 |
| MS.gene058639 | MS.gene60304 | 0.816677 | 4.89E-52 | -1.69E-46 |
| MS.gene058647 | MS.gene60304 | 0.801392 | 9.20E-49 | -1.69E-46 |
| MS.gene058758 | MS.gene60304 | 0.807091 | 5.99E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene60304 | 0.811885 | 5.60E-51 | -1.69E-46 |
| MS.gene058919 | MS.gene60304 | 0.817108 | 3.91E-52 | -1.69E-46 |
| MS.gene059007 | MS.gene60304 | 0.816945 | 4.26E-52 | -1.69E-46 |
| MS.gene059144 | MS.gene60304 | 0.809755 | 1.62E-50 | -1.69E-46 |
| MS.gene059170 | MS.gene60304 | 0.815359 | 9.63E-52 | -1.69E-46 |
| MS.gene059439 | MS.gene60304 | 0.816173 | 6.34E-52 | -1.69E-46 |
| MS.gene059725 | MS.gene60304 | 0.813585 | 2.38E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene60304 | 0.800152 | 1.65E-48 | -1.69E-46 |
| MS.gene05978 | MS.gene60304 | 0.813008 | 3.18E-51 | -1.69E-46 |
| MS.gene059965 | MS.gene60304 | 0.821701 | 3.51E-53 | -1.69E-46 |
| MS.gene060296 | MS.gene60304 | 0.812228 | 4.71E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene60304 | 0.833205 | 6.10E-56 | -1.69E-46 |
| MS.gene06052 | MS.gene60304 | 0.803513 | 3.36E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene60304 | 0.803153 | 3.99E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene60304 | 0.808045 | 3.76E-50 | -1.69E-46 |
| MS.gene060785 | MS.gene60304 | 0.807921 | 3.99E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene60304 | 0.820987 | 5.13E-53 | -1.69E-46 |
| MS.gene060933 | MS.gene60304 | 0.878627 | 2.41E-69 | -1.69E-46 |
| MS.gene060935 | MS.gene60304 | 0.8616 | 9.16E-64 | -1.69E-46 |
| MS.gene060937 | MS.gene60304 | 0.875134 | 3.92E-68 | -1.69E-46 |
| MS.gene061006 | MS.gene60304 | 0.822825 | 1.93E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene60304 | 0.853393 | 2.46E-61 | -1.69E-46 |
| MS.gene06121 | MS.gene60304 | 0.814025 | 1.90E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60304.t1 | MTR_4g107470 | 98.798 | 416 | 5 | 0 | 10 | 425 | 1223 | 1638 | 0.0 | 875 |
| MS.gene60304.t1 | MTR_4g107470 | 98.533 | 409 | 6 | 0 | 10 | 418 | 1223 | 1631 | 0.0 | 858 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60304.t1 | AT3G47890 | 68.627 | 408 | 123 | 2 | 15 | 422 | 1163 | 1565 | 0.0 | 596 |
| MS.gene60304.t1 | AT3G47890 | 68.627 | 408 | 123 | 2 | 15 | 422 | 1163 | 1565 | 0.0 | 596 |
| MS.gene60304.t1 | AT3G47910 | 68.900 | 418 | 122 | 3 | 8 | 422 | 1193 | 1605 | 0.0 | 594 |
| MS.gene60304.t1 | AT3G47910 | 68.900 | 418 | 122 | 3 | 8 | 422 | 1192 | 1604 | 0.0 | 594 |
| MS.gene60304.t1 | AT2G27630 | 27.520 | 367 | 226 | 9 | 59 | 423 | 786 | 1114 | 1.42e-33 | 134 |
| MS.gene60304.t1 | AT1G65120 | 25.634 | 355 | 224 | 9 | 78 | 423 | 821 | 1144 | 2.65e-32 | 130 |
| MS.gene60304.t1 | AT1G65130 | 24.566 | 403 | 240 | 11 | 35 | 424 | 727 | 1078 | 2.53e-31 | 127 |
| MS.gene60304.t1 | AT1G65130 | 25.749 | 334 | 196 | 9 | 101 | 424 | 784 | 1075 | 1.17e-30 | 125 |
| MS.gene60304.t1 | AT1G65200 | 26.462 | 325 | 203 | 8 | 101 | 423 | 806 | 1096 | 4.32e-30 | 124 |
| MS.gene60304.t1 | AT5G51530 | 25.904 | 332 | 211 | 10 | 99 | 423 | 819 | 1122 | 6.44e-30 | 123 |
| MS.gene60304.t1 | AT1G65140 | 33.333 | 189 | 119 | 4 | 236 | 422 | 120 | 303 | 3.16e-29 | 116 |
| MS.gene60304.t1 | AT5G51530 | 26.235 | 324 | 204 | 10 | 107 | 423 | 849 | 1144 | 3.84e-29 | 120 |
| MS.gene60304.t1 | AT2G27650 | 30.049 | 203 | 140 | 2 | 223 | 424 | 901 | 1102 | 8.14e-28 | 117 |
| MS.gene60304.t1 | AT1G65110 | 29.064 | 203 | 141 | 3 | 223 | 423 | 871 | 1072 | 1.46e-27 | 116 |
| MS.gene60304.t1 | AT1G65110 | 29.064 | 203 | 141 | 3 | 223 | 423 | 870 | 1071 | 1.55e-27 | 116 |
| MS.gene60304.t1 | AT1G52450 | 24.286 | 420 | 248 | 11 | 35 | 424 | 750 | 1129 | 2.25e-26 | 112 |
| MS.gene60304.t1 | AT1G65120 | 26.198 | 313 | 191 | 9 | 78 | 381 | 821 | 1102 | 1.83e-25 | 110 |
| MS.gene60304.t1 | AT1G52450 | 28.261 | 230 | 136 | 5 | 223 | 424 | 904 | 1132 | 1.95e-25 | 109 |
| MS.gene60304.t1 | AT1G52430 | 27.826 | 230 | 137 | 5 | 223 | 424 | 904 | 1132 | 4.66e-25 | 108 |
| MS.gene60304.t1 | AT1G52430 | 27.826 | 230 | 137 | 5 | 223 | 424 | 903 | 1131 | 4.74e-25 | 108 |
| MS.gene60304.t1 | AT1G65165 | 36.296 | 135 | 78 | 5 | 292 | 424 | 2 | 130 | 1.04e-24 | 99.0 |
| MS.gene60304.t1 | AT5G61940 | 24.668 | 377 | 230 | 15 | 59 | 423 | 803 | 1137 | 6.00e-24 | 105 |
| MS.gene60304.t1 | AT5G61940 | 24.668 | 377 | 230 | 15 | 59 | 423 | 873 | 1207 | 6.19e-24 | 105 |
| MS.gene60304.t1 | AT5G61940 | 24.668 | 377 | 230 | 15 | 59 | 423 | 854 | 1188 | 6.27e-24 | 105 |
| MS.gene60304.t1 | AT5G61950 | 27.160 | 243 | 161 | 8 | 195 | 424 | 889 | 1128 | 2.64e-22 | 100 |
| MS.gene60304.t1 | AT1G65170 | 32.000 | 150 | 95 | 4 | 275 | 422 | 90 | 234 | 2.76e-22 | 95.9 |
| MS.gene60304.t1 | AT1G65130 | 24.348 | 345 | 202 | 8 | 35 | 369 | 727 | 1022 | 2.97e-22 | 100 |
| MS.gene60304.t1 | AT1G65130 | 21.930 | 228 | 132 | 5 | 101 | 321 | 784 | 972 | 6.56e-11 | 65.1 |
| MS.gene60304.t1 | AT1G65130 | 21.930 | 228 | 132 | 5 | 101 | 321 | 784 | 972 | 6.56e-11 | 65.1 |
Find 101 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTAAATGACCAGATAAT+TGG | 0.215939 | 8.2:+18561473 | MS.gene60304:intron |
| GTGGCATTTAAGACGCTTTC+GGG | 0.265476 | 8.2:+18560069 | MS.gene60304:CDS |
| AAGCTTGTCAAGGGAGCTTT+CGG | 0.285027 | 8.2:-18560768 | None:intergenic |
| CGCTTTCGGGTGGAATTTCT+TGG | 0.287691 | 8.2:+18560082 | MS.gene60304:CDS |
| AACTTGCAGGTATGCTACTA+TGG | 0.307785 | 8.2:+18561315 | MS.gene60304:intron |
| ATTCCAAGCTGATCTTAAAA+TGG | 0.315667 | 8.2:+18558118 | MS.gene60304:CDS |
| TGTGGCATTTAAGACGCTTT+CGG | 0.338112 | 8.2:+18560068 | MS.gene60304:CDS |
| AAAGCAAATGCACGGGGTCT+TGG | 0.341652 | 8.2:+18560459 | MS.gene60304:CDS |
| TAGGATTTAAACCACGATAA+AGG | 0.342732 | 8.2:-18561074 | None:intergenic |
| ACCTTGCTTCAAAGGATTCA+AGG | 0.371565 | 8.2:+18560182 | MS.gene60304:CDS |
| AAGCAAATGCACGGGGTCTT+GGG | 0.400221 | 8.2:+18560460 | MS.gene60304:CDS |
| TGATATCTATCTTGGTGCTC+AGG | 0.408306 | 8.2:-18561047 | None:intergenic |
| TCCTAAAAGCACCCATAACT+TGG | 0.420661 | 8.2:+18561092 | MS.gene60304:CDS |
| GGAAGTATACTTCAAATGTC+TGG | 0.421306 | 8.2:-18560570 | None:intergenic |
| AGCTTGTCAAGGGAGCTTTC+GGG | 0.421720 | 8.2:-18560767 | None:intergenic |
| GAATGATGCTTCGGAGGTAC+TGG | 0.437536 | 8.2:+18560367 | MS.gene60304:CDS |
| AGCACGTGGAAGTTTGCCTT+TGG | 0.437539 | 8.2:+18559767 | MS.gene60304:CDS |
| TACCACTGAAACCAAGTTAT+GGG | 0.445331 | 8.2:-18561103 | None:intergenic |
| TGCTCTAGACCTTGCTTCAA+AGG | 0.448141 | 8.2:+18560174 | MS.gene60304:CDS |
| AAGGACACTGATATCTATCT+TGG | 0.455281 | 8.2:-18561055 | None:intergenic |
| CTTTAATGTATCATCAGTGT+TGG | 0.461244 | 8.2:+18558037 | MS.gene60304:CDS |
| TGGAGCTAGTTTGCTTGGTA+CGG | 0.471768 | 8.2:+18559878 | MS.gene60304:CDS |
| GGCTCAGATGAATGATGCTT+CGG | 0.478966 | 8.2:+18560358 | MS.gene60304:intron |
| TCCTTGAATCCTTTGAAGCA+AGG | 0.482056 | 8.2:-18560183 | None:intergenic |
| TAATCCATTGGCCGTGGTCA+TGG | 0.488540 | 8.2:-18561365 | None:intergenic |
| GGAGCTAGTTTGCTTGGTAC+GGG | 0.491896 | 8.2:+18559879 | MS.gene60304:CDS |
| ATACCACTGAAACCAAGTTA+TGG | 0.493384 | 8.2:-18561104 | None:intergenic |
| CTTCATTGTCCTGAGGGCAT+TGG | 0.498922 | 8.2:-18560612 | None:intergenic |
| TTGACTTGTGATCAAGAAGT+TGG | 0.500345 | 8.2:+18560818 | MS.gene60304:CDS |
| GCAAGTGGAAGATGAGGAGG+AGG | 0.501795 | 8.2:+18558091 | MS.gene60304:CDS |
| AAGCAAAGCAATGATAATGC+TGG | 0.506469 | 8.2:-18561338 | None:intergenic |
| GATATCTATCTTGGTGCTCA+GGG | 0.507752 | 8.2:-18561046 | None:intergenic |
| GACTCAGCGCAGGATGTGAA+TGG | 0.511356 | 8.2:+18559858 | MS.gene60304:CDS |
| TGACCAGATAATTGGTGGAT+GGG | 0.512974 | 8.2:+18561481 | MS.gene60304:intron |
| ACTTGTGAGGAAGATCTTTG+AGG | 0.514745 | 8.2:-18559807 | None:intergenic |
| TAATGACATAACTGCAACTC+TGG | 0.516989 | 8.2:+18561020 | MS.gene60304:CDS |
| CTGCTCAGGTCTTGCACCTG+TGG | 0.518352 | 8.2:+18559833 | MS.gene60304:CDS |
| TTAAATGACCAGATAATTGG+TGG | 0.518696 | 8.2:+18561476 | MS.gene60304:intron |
| GTTCTTACTGTCTGCGAGAG+AGG | 0.519564 | 8.2:+18561509 | MS.gene60304:CDS |
| ATTGCAAGTGGAAGATGAGG+AGG | 0.522604 | 8.2:+18558088 | MS.gene60304:CDS |
| CACGAGTAAATGATCTATGA+AGG | 0.525628 | 8.2:-18560406 | None:intergenic |
| GAGAGGGCATCTACAACCTC+AGG | 0.528654 | 8.2:+18561526 | MS.gene60304:CDS |
| ATATAAATGCCAATGCCCTC+AGG | 0.531753 | 8.2:+18560603 | MS.gene60304:CDS |
| AAACATGGGGTGGAGTTGAA+AGG | 0.531962 | 8.2:-18560874 | None:intergenic |
| TGTCATCATACATAATCCAT+TGG | 0.536218 | 8.2:-18561377 | None:intergenic |
| TGGTATTCACAGTTCTAGGT+TGG | 0.537840 | 8.2:+18560977 | MS.gene60304:intron |
| TCCTCACAAGTAGACTGCTC+AGG | 0.538677 | 8.2:+18559819 | MS.gene60304:CDS |
| CACCCATAACTTGGTTTCAG+TGG | 0.539499 | 8.2:+18561101 | MS.gene60304:CDS |
| GTGAATGGAGCTAGTTTGCT+TGG | 0.541300 | 8.2:+18559873 | MS.gene60304:CDS |
| GATCAAGAAGTTGGCGGCTG+TGG | 0.542368 | 8.2:+18560827 | MS.gene60304:CDS |
| ATGACCAGATAATTGGTGGA+TGG | 0.543660 | 8.2:+18561480 | MS.gene60304:intron |
| AGAATTGCAAGTGGAAGATG+AGG | 0.546505 | 8.2:+18558085 | MS.gene60304:CDS |
| CTGTATGACCTCAGTCATTG+TGG | 0.547980 | 8.2:+18560050 | MS.gene60304:intron |
| ATCAGTGGAAAGCAAATGCA+CGG | 0.549517 | 8.2:+18560451 | MS.gene60304:CDS |
| CAATGCCCTCAGGACAATGA+AGG | 0.556884 | 8.2:+18560613 | MS.gene60304:CDS |
| ATAGCCATGACCACGGCCAA+TGG | 0.559071 | 8.2:+18561361 | MS.gene60304:CDS |
| TCCTGCGCTGAGTCTTCCAC+AGG | 0.559755 | 8.2:-18559849 | None:intergenic |
| TTCTTACTGTCTGCGAGAGA+GGG | 0.560020 | 8.2:+18561510 | MS.gene60304:CDS |
| AGATACCTTCATTGTCCTGA+GGG | 0.563180 | 8.2:-18560618 | None:intergenic |
| GTGGAGTTGAAAGGAAGTGA+TGG | 0.563689 | 8.2:-18560865 | None:intergenic |
| GTATGATGACAAGACTGTTA+AGG | 0.564532 | 8.2:+18561389 | MS.gene60304:CDS |
| AGAGCTATCCGCAGGGAAGT+AGG | 0.566277 | 8.2:-18560220 | None:intergenic |
| GATTGCTTAGAGCTATCCGC+AGG | 0.570272 | 8.2:-18560228 | None:intergenic |
| CTTCATAGATCATTTACTCG+TGG | 0.571858 | 8.2:+18560407 | MS.gene60304:CDS |
| CAAGATTCAAAAGCTTGTCA+AGG | 0.572292 | 8.2:-18560778 | None:intergenic |
| TGTTTCTGATTCAGAATCAG+TGG | 0.574869 | 8.2:+18560436 | MS.gene60304:CDS |
| GACCAGATAATTGGTGGATG+GGG | 0.575524 | 8.2:+18561482 | MS.gene60304:intron |
| GATATCAGTGTCCTTTATCG+TGG | 0.579576 | 8.2:+18561063 | MS.gene60304:CDS |
| GCATTTAAGACGCTTTCGGG+TGG | 0.582449 | 8.2:+18560072 | MS.gene60304:CDS |
| ATGGCTGTACGTCAAAGCCT+AGG | 0.585298 | 8.2:+18558137 | MS.gene60304:CDS |
| AAGATCAGAGCATGATCATG+TGG | 0.586003 | 8.2:+18560111 | MS.gene60304:CDS |
| TCAGTGGAAAGCAAATGCAC+GGG | 0.589655 | 8.2:+18560452 | MS.gene60304:CDS |
| GTTTGCTTGGTACGGGACTG+AGG | 0.590238 | 8.2:+18559886 | MS.gene60304:CDS |
| ACTTGTGATCAAGAAGTTGG+CGG | 0.591875 | 8.2:+18560821 | MS.gene60304:CDS |
| CATACATAATCCATTGGCCG+TGG | 0.602092 | 8.2:-18561371 | None:intergenic |
| TCATCAGTGTTGGAAAACAA+TGG | 0.603058 | 8.2:+18558047 | MS.gene60304:CDS |
| CTTGATCACAAGTCAACCGA+TGG | 0.604128 | 8.2:-18560811 | None:intergenic |
| AAGATTCAAAAGCTTGTCAA+GGG | 0.609844 | 8.2:-18560777 | None:intergenic |
| ACCTGTGGAAGACTCAGCGC+AGG | 0.614178 | 8.2:+18559848 | MS.gene60304:CDS |
| ATCTTGTGGAGAGGAACCAT+CGG | 0.622749 | 8.2:+18560795 | MS.gene60304:CDS |
| GGTGATGAAAGAATTGCAAG+TGG | 0.625042 | 8.2:+18558076 | MS.gene60304:CDS |
| GTTGGAAAACAATGGAACAA+AGG | 0.627413 | 8.2:+18558055 | MS.gene60304:CDS |
| TCTTGGAAGAAGTTACTATG+TGG | 0.628945 | 8.2:-18560256 | None:intergenic |
| AAGATACCTTCATTGTCCTG+AGG | 0.636304 | 8.2:-18560619 | None:intergenic |
| ACCTGAGCAGTCTACTTGTG+AGG | 0.638517 | 8.2:-18559820 | None:intergenic |
| TCAGATGAATGATGCTTCGG+AGG | 0.643944 | 8.2:+18560361 | MS.gene60304:CDS |
| ATACAACGCACAGACAACAC+AGG | 0.645320 | 8.2:-18560140 | None:intergenic |
| GCTTCAAAGAAGAGCACCTG+AGG | 0.651558 | 8.2:-18561542 | None:intergenic |
| TTGAAAGGAAGTGATGGATG+TGG | 0.652532 | 8.2:-18560859 | None:intergenic |
| ACATAGTAACTTCTTCCAAG+AGG | 0.658430 | 8.2:+18560258 | MS.gene60304:CDS |
| TACAACGCACAGACAACACA+GGG | 0.659684 | 8.2:-18560139 | None:intergenic |
| TACGGGACTGAGGAATGAAG+TGG | 0.660455 | 8.2:+18559896 | MS.gene60304:CDS |
| ATTCTCAAACTCGAAACCAA+AGG | 0.660937 | 8.2:-18559783 | None:intergenic |
| TTTGCTTATAGCCATGACCA+CGG | 0.664544 | 8.2:+18561354 | MS.gene60304:CDS |
| AGATCAGAGCATGATCATGT+GGG | 0.668118 | 8.2:+18560112 | MS.gene60304:CDS |
| GTCTGGACTCAAGATTACAA+TGG | 0.675074 | 8.2:-18560553 | None:intergenic |
| CAGTGGAAAGCAAATGCACG+GGG | 0.691157 | 8.2:+18560453 | MS.gene60304:CDS |
| ATTGCTTAGAGCTATCCGCA+GGG | 0.707359 | 8.2:-18560227 | None:intergenic |
| TCAGACACATATCAAGCACG+TGG | 0.711978 | 8.2:+18559753 | MS.gene60304:intron |
| ACGGGACTGAGGAATGAAGT+GGG | 0.715754 | 8.2:+18559897 | MS.gene60304:CDS |
| CAGTTGCACCTACTTCCCTG+CGG | 0.752843 | 8.2:+18560212 | MS.gene60304:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTAATTAATGAAAAG+TGG | - | chr8.2:18559166-18559185 | None:intergenic | 10.0% |
| !! | AAATTTAATTAATGAAAAGT+GGG | - | chr8.2:18559165-18559184 | None:intergenic | 10.0% |
| !! | ATTTATTATAGCTAATTTAA+CGG | - | chr8.2:18559665-18559684 | None:intergenic | 10.0% |
| !! | TCAGTAAATAATATAAATAT+CGG | + | chr8.2:18558431-18558450 | MS.gene60304:intron | 10.0% |
| !!! | AAAGTTTTTTTATTATTTGA+TGG | + | chr8.2:18558512-18558531 | MS.gene60304:intron | 10.0% |
| !! | AATTTAATTAATGAAAAGTG+GGG | - | chr8.2:18559164-18559183 | None:intergenic | 15.0% |
| !! | TAATGTGATTAATGTATTAT+TGG | + | chr8.2:18560326-18560345 | MS.gene60304:intron | 15.0% |
| !!! | ATTAATTAAATTTTAGCACA+AGG | + | chr8.2:18559172-18559191 | MS.gene60304:intron | 15.0% |
| !! | ACTTATACTTAAAAGTTCAA+AGG | + | chr8.2:18559196-18559215 | MS.gene60304:intron | 20.0% |
| !! | ATACTTATTACATTAAGCAA+GGG | - | chr8.2:18558457-18558476 | None:intergenic | 20.0% |
| !! | ATTAATGTATTATTGGCATT+TGG | + | chr8.2:18560333-18560352 | MS.gene60304:intron | 20.0% |
| !! | ATTGAAAGAAAATGAATACA+AGG | + | chr8.2:18560288-18560307 | MS.gene60304:intron | 20.0% |
| !! | ATTTAATTAATGAAAAGTGG+GGG | - | chr8.2:18559163-18559182 | None:intergenic | 20.0% |
| !! | TAGAAGATTGAGATTATATT+CGG | + | chr8.2:18558543-18558562 | MS.gene60304:intron | 20.0% |
| !! | TTAAGTACAACAATAAACAT+GGG | - | chr8.2:18559469-18559488 | None:intergenic | 20.0% |
| !!! | TTTATTATTTGATGGATAGT+TGG | + | chr8.2:18558520-18558539 | MS.gene60304:intron | 20.0% |
| !!! | TTTTCTCAATGTTATTATTC+AGG | + | chr8.2:18559932-18559951 | MS.gene60304:CDS | 20.0% |
| ! | AAAAAAAATTGACTGTGAAG+AGG | - | chr8.2:18559038-18559057 | None:intergenic | 25.0% |
| ! | AAAAAAATTGACTGTGAAGA+GGG | - | chr8.2:18559037-18559056 | None:intergenic | 25.0% |
| ! | AGATCAATACTTCAATATCA+TGG | + | chr8.2:18559343-18559362 | MS.gene60304:intron | 25.0% |
| ! | ATGTATTTGAATGATATGCT+AGG | + | chr8.2:18561125-18561144 | MS.gene60304:intron | 25.0% |
| ! | CAATTATCTGGTCATTTAAA+GGG | - | chr8.2:18561475-18561494 | None:intergenic | 25.0% |
| ! | CATACTTATTACATTAAGCA+AGG | - | chr8.2:18558458-18558477 | None:intergenic | 25.0% |
| ! | GTTAAGTACAACAATAAACA+TGG | - | chr8.2:18559470-18559489 | None:intergenic | 25.0% |
| ! | TAAAATTTCAGCTTCTTTGT+AGG | + | chr8.2:18559075-18559094 | MS.gene60304:intron | 25.0% |
| ! | TAAATCATGAACCTTAAGAA+AGG | + | chr8.2:18559680-18559699 | MS.gene60304:intron | 25.0% |
| ! | TAAATTGTTGCACTAGATAA+TGG | - | chr8.2:18559511-18559530 | None:intergenic | 25.0% |
| ! | TATCAAATCAAGATTCAAGA+AGG | - | chr8.2:18559376-18559395 | None:intergenic | 25.0% |
| ! | TGATTATTAGTAGCTACAAA+TGG | - | chr8.2:18559538-18559557 | None:intergenic | 25.0% |
| ! | TGTAATGAAAGTAGAAACTA+TGG | - | chr8.2:18559584-18559603 | None:intergenic | 25.0% |
| !! | TGCATTTTCGATTAAACATA+GGG | - | chr8.2:18558604-18558623 | None:intergenic | 25.0% |
| !! | TGTTTGAGATAGATAACAAA+TGG | + | chr8.2:18558754-18558773 | MS.gene60304:intron | 25.0% |
| !!! | GGCATTTATATTTTGAAAGA+AGG | - | chr8.2:18560594-18560613 | None:intergenic | 25.0% |
| !!! | TTTAGTTTGTCAAGTTTTAC+TGG | - | chr8.2:18559612-18559631 | None:intergenic | 25.0% |
| AAAAAATTGACTGTGAAGAG+GGG | - | chr8.2:18559036-18559055 | None:intergenic | 30.0% | |
| AAGATTCAAAAGCTTGTCAA+GGG | - | chr8.2:18560780-18560799 | None:intergenic | 30.0% | |
| AAGGGAACAGAATATGATAA+AGG | - | chr8.2:18558349-18558368 | None:intergenic | 30.0% | |
| ACGAAAACTTTCAGAGAAAT+TGG | - | chr8.2:18558322-18558341 | None:intergenic | 30.0% | |
| ACTATGTTACCAAAATCCAT+TGG | - | chr8.2:18561262-18561281 | None:intergenic | 30.0% | |
| ATTCCAAGCTGATCTTAAAA+TGG | + | chr8.2:18558118-18558137 | MS.gene60304:CDS | 30.0% | |
| CCAATTATCTGGTCATTTAA+AGG | - | chr8.2:18561476-18561495 | None:intergenic | 30.0% | |
| CCTTTAAATGACCAGATAAT+TGG | + | chr8.2:18561473-18561492 | MS.gene60304:intron | 30.0% | |
| CTCAATGTTATTATTCAGGT+AGG | + | chr8.2:18559936-18559955 | MS.gene60304:intron | 30.0% | |
| CTTTAATGTATCATCAGTGT+TGG | + | chr8.2:18558037-18558056 | MS.gene60304:CDS | 30.0% | |
| GATAAGAAGAATCAGTTACA+AGG | - | chr8.2:18559735-18559754 | None:intergenic | 30.0% | |
| GATGAGATAATTGGAGAAAA+AGG | - | chr8.2:18558970-18558989 | None:intergenic | 30.0% | |
| GTACTGAAAGATTTATACCT+AGG | - | chr8.2:18558157-18558176 | None:intergenic | 30.0% | |
| GTTATCTATCTCAAACAAAC+AGG | - | chr8.2:18558751-18558770 | None:intergenic | 30.0% | |
| TACTGTAAATGACTCAAGAA+AGG | + | chr8.2:18558277-18558296 | MS.gene60304:intron | 30.0% | |
| TAGGATTTAAACCACGATAA+AGG | - | chr8.2:18561077-18561096 | None:intergenic | 30.0% | |
| TCAAGATTCAAGAAGGAATT+TGG | - | chr8.2:18559369-18559388 | None:intergenic | 30.0% | |
| TGCAATGTAAACATTTACTG+TGG | + | chr8.2:18561223-18561242 | MS.gene60304:intron | 30.0% | |
| TGCCAAAAGAAATGTTCATT+GGG | - | chr8.2:18558919-18558938 | None:intergenic | 30.0% | |
| TGCTCTTTATCTTACATGTT+TGG | + | chr8.2:18560957-18560976 | MS.gene60304:intron | 30.0% | |
| TGTCATCATACATAATCCAT+TGG | - | chr8.2:18561380-18561399 | None:intergenic | 30.0% | |
| TGTTGTACTTAACTTTGCAA+GGG | + | chr8.2:18559477-18559496 | MS.gene60304:intron | 30.0% | |
| TTAAATGACCAGATAATTGG+TGG | + | chr8.2:18561476-18561495 | MS.gene60304:intron | 30.0% | |
| TTCCCTTCATTTACAATATG+TGG | + | chr8.2:18558991-18559010 | MS.gene60304:intron | 30.0% | |
| TTCTTTGTAGGAGATATTAG+AGG | + | chr8.2:18559087-18559106 | MS.gene60304:intron | 30.0% | |
| TTGTTGTACTTAACTTTGCA+AGG | + | chr8.2:18559476-18559495 | MS.gene60304:intron | 30.0% | |
| TTTATCATATTCTGTTCCCT+TGG | + | chr8.2:18558348-18558367 | MS.gene60304:intron | 30.0% | |
| TTTCTTGAGTCATTTACAGT+AGG | - | chr8.2:18558278-18558297 | None:intergenic | 30.0% | |
| ! | AAGTATGACCCCTATTTTAT+AGG | + | chr8.2:18558471-18558490 | MS.gene60304:intron | 30.0% |
| ! | AGTATGACCCCTATTTTATA+GGG | + | chr8.2:18558472-18558491 | MS.gene60304:intron | 30.0% |
| ! | CTGCATTTTCGATTAAACAT+AGG | - | chr8.2:18558605-18558624 | None:intergenic | 30.0% |
| ! | TTTCTGATTTTATGCTCAGA+GGG | + | chr8.2:18560675-18560694 | MS.gene60304:intron | 30.0% |
| !! | GATTTTGGTAACATAGTAGT+GGG | + | chr8.2:18561265-18561284 | MS.gene60304:intron | 30.0% |
| !! | TCATAGCTTTAAATTTAGCC+AGG | - | chr8.2:18558385-18558404 | None:intergenic | 30.0% |
| !! | TGTATAGCACATTCACTTTT+TGG | + | chr8.2:18560500-18560519 | MS.gene60304:CDS | 30.0% |
| AAAAAGGACAAGATCTACAC+AGG | - | chr8.2:18558954-18558973 | None:intergenic | 35.0% | |
| AAAAATTGACTGTGAAGAGG+GGG | - | chr8.2:18559035-18559054 | None:intergenic | 35.0% | |
| AAACACTACAGAGTAAAGGA+AGG | - | chr8.2:18558690-18558709 | None:intergenic | 35.0% | |
| AACAAACAGGCTAATAGAAG+AGG | - | chr8.2:18558738-18558757 | None:intergenic | 35.0% | |
| AACACTACAGAGTAAAGGAA+GGG | - | chr8.2:18558689-18558708 | None:intergenic | 35.0% | |
| AAGCTCCATACAATTAGAGT+TGG | + | chr8.2:18558578-18558597 | MS.gene60304:intron | 35.0% | |
| AAGGACACTGATATCTATCT+TGG | - | chr8.2:18561058-18561077 | None:intergenic | 35.0% | |
| AATTAATGAAAAGTGGGGGA+TGG | - | chr8.2:18559159-18559178 | None:intergenic | 35.0% | |
| ACATAGTAACTTCTTCCAAG+AGG | + | chr8.2:18560258-18560277 | MS.gene60304:CDS | 35.0% | |
| AGCATACCTGCAAGTTTAAA+TGG | - | chr8.2:18561311-18561330 | None:intergenic | 35.0% | |
| AGGTACCTGTCATAAAAACA+TGG | - | chr8.2:18560892-18560911 | None:intergenic | 35.0% | |
| ATACAAGGTAGTTCATCTGT+TGG | + | chr8.2:18560303-18560322 | MS.gene60304:intron | 35.0% | |
| ATACCACTGAAACCAAGTTA+TGG | - | chr8.2:18561107-18561126 | None:intergenic | 35.0% | |
| ATGTATTATTGGCATTTGGC+AGG | + | chr8.2:18560337-18560356 | MS.gene60304:intron | 35.0% | |
| ATTAATGAAAAGTGGGGGAT+GGG | - | chr8.2:18559158-18559177 | None:intergenic | 35.0% | |
| ATTCTCAAACTCGAAACCAA+AGG | - | chr8.2:18559786-18559805 | None:intergenic | 35.0% | |
| ATTTACTGTGGAATTTGCAG+AGG | + | chr8.2:18561235-18561254 | MS.gene60304:intron | 35.0% | |
| CAAGATTCAAAAGCTTGTCA+AGG | - | chr8.2:18560781-18560800 | None:intergenic | 35.0% | |
| CACGAGTAAATGATCTATGA+AGG | - | chr8.2:18560409-18560428 | None:intergenic | 35.0% | |
| CAGAGAAATTGGCATTCAAA+CGG | - | chr8.2:18558311-18558330 | None:intergenic | 35.0% | |
| CCAAAAGAAATGTTCATTGG+GGG | - | chr8.2:18558917-18558936 | None:intergenic | 35.0% | |
| CTTCATAGATCATTTACTCG+TGG | + | chr8.2:18560407-18560426 | MS.gene60304:CDS | 35.0% | |
| CTTTCAATGAAGTTACCTCT+TGG | - | chr8.2:18560276-18560295 | None:intergenic | 35.0% | |
| GAAGGGAAAGATGAGATAAT+TGG | - | chr8.2:18558979-18558998 | None:intergenic | 35.0% | |
| GCCAAAAGAAATGTTCATTG+GGG | - | chr8.2:18558918-18558937 | None:intergenic | 35.0% | |
| GCTAATAGAAGAGGACTAAT+AGG | - | chr8.2:18558729-18558748 | None:intergenic | 35.0% | |
| GGCCACATATTGTAAATGAA+GGG | - | chr8.2:18558996-18559015 | None:intergenic | 35.0% | |
| GGTACCTGTCATAAAAACAT+GGG | - | chr8.2:18560891-18560910 | None:intergenic | 35.0% | |
| GTACCTGTCATAAAAACATG+GGG | - | chr8.2:18560890-18560909 | None:intergenic | 35.0% | |
| GTATGATGACAAGACTGTTA+AGG | + | chr8.2:18561389-18561408 | MS.gene60304:CDS | 35.0% | |
| GTGCCAAAAGAAATGTTCAT+TGG | - | chr8.2:18558920-18558939 | None:intergenic | 35.0% | |
| GTTGGAAAACAATGGAACAA+AGG | + | chr8.2:18558055-18558074 | MS.gene60304:CDS | 35.0% | |
| TAATGACATAACTGCAACTC+TGG | + | chr8.2:18561020-18561039 | MS.gene60304:CDS | 35.0% | |
| TACAAAGAAAGCTTACTGCA+TGG | - | chr8.2:18559319-18559338 | None:intergenic | 35.0% | |
| TACCACTGAAACCAAGTTAT+GGG | - | chr8.2:18561106-18561125 | None:intergenic | 35.0% | |
| TACTTCTGAGTTTAAGCTGT+CGG | + | chr8.2:18559266-18559285 | MS.gene60304:intron | 35.0% | |
| TCTTGGAAGAAGTTACTATG+TGG | - | chr8.2:18560259-18560278 | None:intergenic | 35.0% | |
| TGTTTGGTATTCACAGTTCT+AGG | + | chr8.2:18560973-18560992 | MS.gene60304:intron | 35.0% | |
| ! | AAGCAAAGCAATGATAATGC+TGG | - | chr8.2:18561341-18561360 | None:intergenic | 35.0% |
| ! | GGAAGTATACTTCAAATGTC+TGG | - | chr8.2:18560573-18560592 | None:intergenic | 35.0% |
| ! | GTTTCTGATTTTATGCTCAG+AGG | + | chr8.2:18560674-18560693 | MS.gene60304:intron | 35.0% |
| ! | TCATCAGTGTTGGAAAACAA+TGG | + | chr8.2:18558047-18558066 | MS.gene60304:CDS | 35.0% |
| ! | TGACAAGCTTTTGAATCTTG+TGG | + | chr8.2:18560781-18560800 | MS.gene60304:CDS | 35.0% |
| ! | TGTTTCTGATTCAGAATCAG+TGG | + | chr8.2:18560436-18560455 | MS.gene60304:CDS | 35.0% |
| ! | TTCTGATTTTATGCTCAGAG+GGG | + | chr8.2:18560676-18560695 | MS.gene60304:intron | 35.0% |
| !! | AGGACAATGAAGGTATCTTT+AGG | + | chr8.2:18560623-18560642 | MS.gene60304:intron | 35.0% |
| !! | AGTAGGTGGATTTTGTCTTA+AGG | - | chr8.2:18558261-18558280 | None:intergenic | 35.0% |
| !! | GGATTTTGGTAACATAGTAG+TGG | + | chr8.2:18561264-18561283 | MS.gene60304:intron | 35.0% |
| !! | TTGACTTGTGATCAAGAAGT+TGG | + | chr8.2:18560818-18560837 | MS.gene60304:CDS | 35.0% |
| !! | TTTGTGCCATTTAAACTTGC+AGG | + | chr8.2:18561302-18561321 | MS.gene60304:intron | 35.0% |
| AACTTGCAGGTATGCTACTA+TGG | + | chr8.2:18561315-18561334 | MS.gene60304:intron | 40.0% | |
| AAGATACCTTCATTGTCCTG+AGG | - | chr8.2:18560622-18560641 | None:intergenic | 40.0% | |
| AAGATCAGAGCATGATCATG+TGG | + | chr8.2:18560111-18560130 | MS.gene60304:CDS | 40.0% | |
| AAGCCAGAACTCCTTTCTTA+AGG | - | chr8.2:18559694-18559713 | None:intergenic | 40.0% | |
| AAGCCCTCCCTATAAAATAG+GGG | - | chr8.2:18558482-18558501 | None:intergenic | 40.0% | |
| AAGTTTCGATTAAACACCGG+TGG | + | chr8.2:18558817-18558836 | MS.gene60304:intron | 40.0% | |
| ACACTACAGAGTAAAGGAAG+GGG | - | chr8.2:18558688-18558707 | None:intergenic | 40.0% | |
| ACCTTGCTTCAAAGGATTCA+AGG | + | chr8.2:18560182-18560201 | MS.gene60304:CDS | 40.0% | |
| ACTTGTGAGGAAGATCTTTG+AGG | - | chr8.2:18559810-18559829 | None:intergenic | 40.0% | |
| ACTTGTGATCAAGAAGTTGG+CGG | + | chr8.2:18560821-18560840 | MS.gene60304:CDS | 40.0% | |
| AGAATTGCAAGTGGAAGATG+AGG | + | chr8.2:18558085-18558104 | MS.gene60304:CDS | 40.0% | |
| AGATACCTTCATTGTCCTGA+GGG | - | chr8.2:18560621-18560640 | None:intergenic | 40.0% | |
| AGATCAGAGCATGATCATGT+GGG | + | chr8.2:18560112-18560131 | MS.gene60304:CDS | 40.0% | |
| ATATAAATGCCAATGCCCTC+AGG | + | chr8.2:18560603-18560622 | MS.gene60304:CDS | 40.0% | |
| ATCAGTGGAAAGCAAATGCA+CGG | + | chr8.2:18560451-18560470 | MS.gene60304:CDS | 40.0% | |
| ATGACCAGATAATTGGTGGA+TGG | + | chr8.2:18561480-18561499 | MS.gene60304:intron | 40.0% | |
| CCGAAGTTTCGATTAAACAC+CGG | + | chr8.2:18558814-18558833 | MS.gene60304:intron | 40.0% | |
| CCGGTGTTTAATCGAAACTT+CGG | - | chr8.2:18558817-18558836 | None:intergenic | 40.0% | |
| CTTAAATGCCACAATGACTG+AGG | - | chr8.2:18560061-18560080 | None:intergenic | 40.0% | |
| CTTGAGTCATTTACAGTAGG+TGG | - | chr8.2:18558275-18558294 | None:intergenic | 40.0% | |
| GAACCTTAAGAAAGGAGTTC+TGG | + | chr8.2:18559688-18559707 | MS.gene60304:intron | 40.0% | |
| GAAGCCCTCCCTATAAAATA+GGG | - | chr8.2:18558483-18558502 | None:intergenic | 40.0% | |
| GACAGTTGTCATGTGTTAAG+TGG | - | chr8.2:18558857-18558876 | None:intergenic | 40.0% | |
| GATATCAGTGTCCTTTATCG+TGG | + | chr8.2:18561063-18561082 | MS.gene60304:CDS | 40.0% | |
| GGGAAAACACTACAGAGTAA+AGG | - | chr8.2:18558694-18558713 | None:intergenic | 40.0% | |
| GGGCCACATATTGTAAATGA+AGG | - | chr8.2:18558997-18559016 | None:intergenic | 40.0% | |
| GGTGATGAAAGAATTGCAAG+TGG | + | chr8.2:18558076-18558095 | MS.gene60304:CDS | 40.0% | |
| GTCATGTGTTAAGTGGAGAA+GGG | - | chr8.2:18558850-18558869 | None:intergenic | 40.0% | |
| GTCTGGACTCAAGATTACAA+TGG | - | chr8.2:18560556-18560575 | None:intergenic | 40.0% | |
| TAGGGCCAACTCTAATTGTA+TGG | - | chr8.2:18558586-18558605 | None:intergenic | 40.0% | |
| TCAAATTCGTCTCAAACAGC+AGG | - | chr8.2:18561184-18561203 | None:intergenic | 40.0% | |
| TCATATTCTGTTCCCTTGGT+CGG | + | chr8.2:18558352-18558371 | MS.gene60304:intron | 40.0% | |
| TGTCATGTGTTAAGTGGAGA+AGG | - | chr8.2:18558851-18558870 | None:intergenic | 40.0% | |
| TTAATGAAAAGTGGGGGATG+GGG | - | chr8.2:18559157-18559176 | None:intergenic | 40.0% | |
| TTTGCTTATAGCCATGACCA+CGG | + | chr8.2:18561354-18561373 | MS.gene60304:CDS | 40.0% | |
| ! | ACCAAGTTATGGGTGCTTTT+AGG | - | chr8.2:18561096-18561115 | None:intergenic | 40.0% |
| ! | AGCTTTTGAATCTTGTGGAG+AGG | + | chr8.2:18560786-18560805 | MS.gene60304:CDS | 40.0% |
| ! | AGTTCAAAGGTTCTAGTGTG+AGG | + | chr8.2:18559209-18559228 | MS.gene60304:intron | 40.0% |
| ! | ATGACCCCTATTTTATAGGG+AGG | + | chr8.2:18558475-18558494 | MS.gene60304:intron | 40.0% |
| ! | ATGACTAGCTCTCTCATAGA+TGG | + | chr8.2:18559433-18559452 | MS.gene60304:intron | 40.0% |
| ! | CCCCCAATGAACATTTCTTT+TGG | + | chr8.2:18558914-18558933 | MS.gene60304:intron | 40.0% |
| ! | TGACCAGATAATTGGTGGAT+GGG | + | chr8.2:18561481-18561500 | MS.gene60304:intron | 40.0% |
| ! | TGACCCCTATTTTATAGGGA+GGG | + | chr8.2:18558476-18558495 | MS.gene60304:intron | 40.0% |
| ! | TGTGGCATTTAAGACGCTTT+CGG | + | chr8.2:18560068-18560087 | MS.gene60304:CDS | 40.0% |
| !! | GATATCTATCTTGGTGCTCA+GGG | - | chr8.2:18561049-18561068 | None:intergenic | 40.0% |
| !! | TCCTAAAAGCACCCATAACT+TGG | + | chr8.2:18561092-18561111 | MS.gene60304:CDS | 40.0% |
| !! | TCCTTGAATCCTTTGAAGCA+AGG | - | chr8.2:18560186-18560205 | None:intergenic | 40.0% |
| !! | TGATATCTATCTTGGTGCTC+AGG | - | chr8.2:18561050-18561069 | None:intergenic | 40.0% |
| !! | TGGTATTCACAGTTCTAGGT+TGG | + | chr8.2:18560977-18560996 | MS.gene60304:intron | 40.0% |
| !! | TTGAAAGGAAGTGATGGATG+TGG | - | chr8.2:18560862-18560881 | None:intergenic | 40.0% |
| !!! | CAGCCATTTTAAGATCAGCT+TGG | - | chr8.2:18558124-18558143 | None:intergenic | 40.0% |
| AAACATGGGGTGGAGTTGAA+AGG | - | chr8.2:18560877-18560896 | None:intergenic | 45.0% | |
| AAGCTTGTCAAGGGAGCTTT+CGG | - | chr8.2:18560771-18560790 | None:intergenic | 45.0% | |
| ACATCCACACACAACAACTG+AGG | - | chr8.2:18560912-18560931 | None:intergenic | 45.0% | |
| ACTAATAGGCAGAGGAAAGG+GGG | - | chr8.2:18558715-18558734 | None:intergenic | 45.0% | |
| AGAAATGTTCATTGGGGGAG+CGG | - | chr8.2:18558912-18558931 | None:intergenic | 45.0% | |
| AGAAGAGGACTAATAGGCAG+AGG | - | chr8.2:18558723-18558742 | None:intergenic | 45.0% | |
| AGGACTAATAGGCAGAGGAA+AGG | - | chr8.2:18558718-18558737 | None:intergenic | 45.0% | |
| ATACAACGCACAGACAACAC+AGG | - | chr8.2:18560143-18560162 | None:intergenic | 45.0% | |
| ATAGCCTGAAAGGTGACGAA+GGG | - | chr8.2:18560743-18560762 | None:intergenic | 45.0% | |
| ATCTTGTGGAGAGGAACCAT+CGG | + | chr8.2:18560795-18560814 | MS.gene60304:CDS | 45.0% | |
| ATGTGTTAAGTGGAGAAGGG+CGG | - | chr8.2:18558847-18558866 | None:intergenic | 45.0% | |
| ATTGCAAGTGGAAGATGAGG+AGG | + | chr8.2:18558088-18558107 | MS.gene60304:CDS | 45.0% | |
| ATTGCTTAGAGCTATCCGCA+GGG | - | chr8.2:18560230-18560249 | None:intergenic | 45.0% | |
| CACATGACAACTGTCCATGA+TGG | + | chr8.2:18558862-18558881 | MS.gene60304:intron | 45.0% | |
| CACCCATAACTTGGTTTCAG+TGG | + | chr8.2:18561101-18561120 | MS.gene60304:CDS | 45.0% | |
| CATACATAATCCATTGGCCG+TGG | - | chr8.2:18561374-18561393 | None:intergenic | 45.0% | |
| CCTGTCATAAAAACATGGGG+TGG | - | chr8.2:18560887-18560906 | None:intergenic | 45.0% | |
| CGAAGCCCTCCCTATAAAAT+AGG | - | chr8.2:18558484-18558503 | None:intergenic | 45.0% | |
| CTGTATGACCTCAGTCATTG+TGG | + | chr8.2:18560050-18560069 | MS.gene60304:intron | 45.0% | |
| CTTGATCACAAGTCAACCGA+TGG | - | chr8.2:18560814-18560833 | None:intergenic | 45.0% | |
| GACTAATAGGCAGAGGAAAG+GGG | - | chr8.2:18558716-18558735 | None:intergenic | 45.0% | |
| GGACTAATAGGCAGAGGAAA+GGG | - | chr8.2:18558717-18558736 | None:intergenic | 45.0% | |
| GGCTCAGATGAATGATGCTT+CGG | + | chr8.2:18560358-18560377 | MS.gene60304:intron | 45.0% | |
| GTGGAGTTGAAAGGAAGTGA+TGG | - | chr8.2:18560868-18560887 | None:intergenic | 45.0% | |
| GTTTAAGCTGTCGGAGTAGT+TGG | + | chr8.2:18559275-18559294 | MS.gene60304:intron | 45.0% | |
| TAATGAAAAGTGGGGGATGG+GGG | - | chr8.2:18559156-18559175 | None:intergenic | 45.0% | |
| TACAACGCACAGACAACACA+GGG | - | chr8.2:18560142-18560161 | None:intergenic | 45.0% | |
| TCAGACACATATCAAGCACG+TGG | + | chr8.2:18559753-18559772 | MS.gene60304:intron | 45.0% | |
| TCAGATGAATGATGCTTCGG+AGG | + | chr8.2:18560361-18560380 | MS.gene60304:CDS | 45.0% | |
| TCAGTGGAAAGCAAATGCAC+GGG | + | chr8.2:18560452-18560471 | MS.gene60304:CDS | 45.0% | |
| TGGAATTTGCAGAGGTCCAA+TGG | + | chr8.2:18561243-18561262 | MS.gene60304:intron | 45.0% | |
| TTCGGGAAACATAGCCTGAA+AGG | - | chr8.2:18560753-18560772 | None:intergenic | 45.0% | |
| TTCTTACTGTCTGCGAGAGA+GGG | + | chr8.2:18561510-18561529 | MS.gene60304:CDS | 45.0% | |
| TTTCGATTAAACACCGGTGG+TGG | + | chr8.2:18558820-18558839 | MS.gene60304:intron | 45.0% | |
| ! | ACTAGCTCTCTCATAGATGG+TGG | + | chr8.2:18559436-18559455 | MS.gene60304:intron | 45.0% |
| ! | GACCAGATAATTGGTGGATG+GGG | + | chr8.2:18561482-18561501 | MS.gene60304:intron | 45.0% |
| ! | GTGGCATTTAAGACGCTTTC+GGG | + | chr8.2:18560069-18560088 | MS.gene60304:CDS | 45.0% |
| ! | TGCTCTAGACCTTGCTTCAA+AGG | + | chr8.2:18560174-18560193 | MS.gene60304:CDS | 45.0% |
| !! | CCACCCCATGTTTTTATGAC+AGG | + | chr8.2:18560884-18560903 | MS.gene60304:CDS | 45.0% |
| !! | GTGAATGGAGCTAGTTTGCT+TGG | + | chr8.2:18559873-18559892 | MS.gene60304:CDS | 45.0% |
| !! | TGCAGAGGTCCAATGGATTT+TGG | + | chr8.2:18561250-18561269 | MS.gene60304:intron | 45.0% |
| !! | TGGAGCTAGTTTGCTTGGTA+CGG | + | chr8.2:18559878-18559897 | MS.gene60304:CDS | 45.0% |
| !!! | TCGGACGAGATGTTTTGAGA+AGG | - | chr8.2:18558798-18558817 | None:intergenic | 45.0% |
| !! | CAATTATTATAATAAAATAT+TGG | - | chr8.2:18559981-18560000 | None:intergenic | 5.0% |
| AAAGCAAATGCACGGGGTCT+TGG | + | chr8.2:18560459-18560478 | MS.gene60304:CDS | 50.0% | |
| AAATGTTCATTGGGGGAGCG+GGG | - | chr8.2:18558910-18558929 | None:intergenic | 50.0% | |
| AAGCAAATGCACGGGGTCTT+GGG | + | chr8.2:18560460-18560479 | MS.gene60304:CDS | 50.0% | |
| ACCTGAGCAGTCTACTTGTG+AGG | - | chr8.2:18559823-18559842 | None:intergenic | 50.0% | |
| ACGGGACTGAGGAATGAAGT+GGG | + | chr8.2:18559897-18559916 | MS.gene60304:CDS | 50.0% | |
| AGATCCCTTCGTCACCTTTC+AGG | + | chr8.2:18560736-18560755 | MS.gene60304:intron | 50.0% | |
| AGCACGTGGAAGTTTGCCTT+TGG | + | chr8.2:18559767-18559786 | MS.gene60304:CDS | 50.0% | |
| AGCTTGTCAAGGGAGCTTTC+GGG | - | chr8.2:18560770-18560789 | None:intergenic | 50.0% | |
| AGGGGGCTAACTGAACATGA+TGG | - | chr8.2:18559018-18559037 | None:intergenic | 50.0% | |
| ATGGCTGTACGTCAAAGCCT+AGG | + | chr8.2:18558137-18558156 | MS.gene60304:CDS | 50.0% | |
| CAATGCCCTCAGGACAATGA+AGG | + | chr8.2:18560613-18560632 | MS.gene60304:CDS | 50.0% | |
| CAGTGGAAAGCAAATGCACG+GGG | + | chr8.2:18560453-18560472 | MS.gene60304:CDS | 50.0% | |
| CATAGCCTGAAAGGTGACGA+AGG | - | chr8.2:18560744-18560763 | None:intergenic | 50.0% | |
| CTAATAGGCAGAGGAAAGGG+GGG | - | chr8.2:18558714-18558733 | None:intergenic | 50.0% | |
| CTACAGAGTAAAGGAAGGGG+CGG | - | chr8.2:18558685-18558704 | None:intergenic | 50.0% | |
| GAAATGTTCATTGGGGGAGC+GGG | - | chr8.2:18558911-18558930 | None:intergenic | 50.0% | |
| GATTGCTTAGAGCTATCCGC+AGG | - | chr8.2:18560231-18560250 | None:intergenic | 50.0% | |
| GGAAGGGAACTGTACCATCA+TGG | - | chr8.2:18558879-18558898 | None:intergenic | 50.0% | |
| GGGGGCTAACTGAACATGAT+GGG | - | chr8.2:18559017-18559036 | None:intergenic | 50.0% | |
| GGTACCTCAGTTGTTGTGTG+TGG | + | chr8.2:18560905-18560924 | MS.gene60304:intron | 50.0% | |
| GTGACGAAGGGATCTAGCTA+AGG | - | chr8.2:18560731-18560750 | None:intergenic | 50.0% | |
| GTTCTTACTGTCTGCGAGAG+AGG | + | chr8.2:18561509-18561528 | MS.gene60304:CDS | 50.0% | |
| TAATCCATTGGCCGTGGTCA+TGG | - | chr8.2:18561368-18561387 | None:intergenic | 50.0% | |
| TACAGAGTAAAGGAAGGGGC+GGG | - | chr8.2:18558684-18558703 | None:intergenic | 50.0% | |
| TACGGGACTGAGGAATGAAG+TGG | + | chr8.2:18559896-18559915 | MS.gene60304:CDS | 50.0% | |
| TCCTCACAAGTAGACTGCTC+AGG | + | chr8.2:18559819-18559838 | MS.gene60304:CDS | 50.0% | |
| TGTGTTAAGTGGAGAAGGGC+GGG | - | chr8.2:18558846-18558865 | None:intergenic | 50.0% | |
| ! | CGCTTTCGGGTGGAATTTCT+TGG | + | chr8.2:18560082-18560101 | MS.gene60304:CDS | 50.0% |
| ! | CTTCATTGTCCTGAGGGCAT+TGG | - | chr8.2:18560615-18560634 | None:intergenic | 50.0% |
| ! | GAATGATGCTTCGGAGGTAC+TGG | + | chr8.2:18560367-18560386 | MS.gene60304:CDS | 50.0% |
| ! | GCATTTAAGACGCTTTCGGG+TGG | + | chr8.2:18560072-18560091 | MS.gene60304:CDS | 50.0% |
| !! | GCTTCAAAGAAGAGCACCTG+AGG | - | chr8.2:18561545-18561564 | None:intergenic | 50.0% |
| !! | GGAGCTAGTTTGCTTGGTAC+GGG | + | chr8.2:18559879-18559898 | MS.gene60304:CDS | 50.0% |
| AGAGCTATCCGCAGGGAAGT+AGG | - | chr8.2:18560223-18560242 | None:intergenic | 55.0% | |
| ATAGCCATGACCACGGCCAA+TGG | + | chr8.2:18561361-18561380 | MS.gene60304:CDS | 55.0% | |
| CAGTTGCACCTACTTCCCTG+CGG | + | chr8.2:18560212-18560231 | MS.gene60304:CDS | 55.0% | |
| CCAGGAAAGCAACCGACCAA+GGG | - | chr8.2:18558367-18558386 | None:intergenic | 55.0% | |
| CGCCCCATCCACCAATTATC+TGG | - | chr8.2:18561487-18561506 | None:intergenic | 55.0% | |
| GACTCAGCGCAGGATGTGAA+TGG | + | chr8.2:18559858-18559877 | MS.gene60304:CDS | 55.0% | |
| GATCAAGAAGTTGGCGGCTG+TGG | + | chr8.2:18560827-18560846 | MS.gene60304:CDS | 55.0% | |
| GCAAGTGGAAGATGAGGAGG+AGG | + | chr8.2:18558091-18558110 | MS.gene60304:CDS | 55.0% | |
| GTTTGCTTGGTACGGGACTG+AGG | + | chr8.2:18559886-18559905 | MS.gene60304:CDS | 55.0% | |
| !! | GAGAGGGCATCTACAACCTC+AGG | + | chr8.2:18561526-18561545 | MS.gene60304:CDS | 55.0% |
| ACCTGTGGAAGACTCAGCGC+AGG | + | chr8.2:18559848-18559867 | MS.gene60304:CDS | 60.0% | |
| CTGCTCAGGTCTTGCACCTG+TGG | + | chr8.2:18559833-18559852 | MS.gene60304:CDS | 60.0% | |
| GAGCGGGGACAAGAGAGGAA+GGG | - | chr8.2:18558895-18558914 | None:intergenic | 60.0% | |
| GCCAGGAAAGCAACCGACCA+AGG | - | chr8.2:18558368-18558387 | None:intergenic | 60.0% | |
| TCCTGCGCTGAGTCTTCCAC+AGG | - | chr8.2:18559852-18559871 | None:intergenic | 60.0% | |
| ! | CCCTTGGTCGGTTGCTTTCC+TGG | + | chr8.2:18558364-18558383 | MS.gene60304:intron | 60.0% |
| AGTGGGGGATGGGGGAAGCA+AGG | - | chr8.2:18559148-18559167 | None:intergenic | 65.0% | |
| GGAGCGGGGACAAGAGAGGA+AGG | - | chr8.2:18558896-18558915 | None:intergenic | 65.0% | |
| GTGGGGGATGGGGGAAGCAA+GGG | - | chr8.2:18559147-18559166 | None:intergenic | 65.0% | |
| TGGGGGAGCGGGGACAAGAG+AGG | - | chr8.2:18558900-18558919 | None:intergenic | 70.0% | |
| GGAGAAGGGCGGGCCACCAC+CGG | - | chr8.2:18558836-18558855 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 18558026 | 18561574 | 18558026 | ID=MS.gene60304 |
| chr8.2 | mRNA | 18558026 | 18561574 | 18558026 | ID=MS.gene60304.t1;Parent=MS.gene60304 |
| chr8.2 | exon | 18558026 | 18558158 | 18558026 | ID=MS.gene60304.t1.exon1;Parent=MS.gene60304.t1 |
| chr8.2 | CDS | 18558026 | 18558158 | 18558026 | ID=cds.MS.gene60304.t1;Parent=MS.gene60304.t1 |
| chr8.2 | exon | 18559757 | 18559953 | 18559757 | ID=MS.gene60304.t1.exon2;Parent=MS.gene60304.t1 |
| chr8.2 | CDS | 18559757 | 18559953 | 18559757 | ID=cds.MS.gene60304.t1;Parent=MS.gene60304.t1 |
| chr8.2 | exon | 18560064 | 18560279 | 18560064 | ID=MS.gene60304.t1.exon3;Parent=MS.gene60304.t1 |
| chr8.2 | CDS | 18560064 | 18560279 | 18560064 | ID=cds.MS.gene60304.t1;Parent=MS.gene60304.t1 |
| chr8.2 | exon | 18560359 | 18560634 | 18560359 | ID=MS.gene60304.t1.exon4;Parent=MS.gene60304.t1 |
| chr8.2 | CDS | 18560359 | 18560634 | 18560359 | ID=cds.MS.gene60304.t1;Parent=MS.gene60304.t1 |
| chr8.2 | exon | 18560758 | 18560905 | 18560758 | ID=MS.gene60304.t1.exon5;Parent=MS.gene60304.t1 |
| chr8.2 | CDS | 18560758 | 18560905 | 18560758 | ID=cds.MS.gene60304.t1;Parent=MS.gene60304.t1 |
| chr8.2 | exon | 18560989 | 18561122 | 18560989 | ID=MS.gene60304.t1.exon6;Parent=MS.gene60304.t1 |
| chr8.2 | CDS | 18560989 | 18561122 | 18560989 | ID=cds.MS.gene60304.t1;Parent=MS.gene60304.t1 |
| chr8.2 | exon | 18561324 | 18561410 | 18561324 | ID=MS.gene60304.t1.exon7;Parent=MS.gene60304.t1 |
| chr8.2 | CDS | 18561324 | 18561410 | 18561324 | ID=cds.MS.gene60304.t1;Parent=MS.gene60304.t1 |
| chr8.2 | exon | 18561488 | 18561574 | 18561488 | ID=MS.gene60304.t1.exon8;Parent=MS.gene60304.t1 |
| chr8.2 | CDS | 18561488 | 18561574 | 18561488 | ID=cds.MS.gene60304.t1;Parent=MS.gene60304.t1 |
| Gene Sequence |
| Protein sequence |
