Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74072.t1 | XP_003621878.2 | 92.3 | 350 | 27 | 0 | 1 | 350 | 1 | 350 | 3.10E-186 | 661 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74072.t1 | O22308 | 55.4 | 350 | 149 | 3 | 3 | 348 | 4 | 350 | 3.8e-108 | 392.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74072.t1 | G7KWV7 | 92.3 | 350 | 27 | 0 | 1 | 350 | 1 | 350 | 2.2e-186 | 661.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049281 | MS.gene74072 | 0.815295 | 9.95E-52 | -1.69E-46 |
| MS.gene049611 | MS.gene74072 | 0.812421 | 4.28E-51 | -1.69E-46 |
| MS.gene050216 | MS.gene74072 | -0.813976 | 1.95E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene74072 | 0.839289 | 1.73E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene74072 | -0.824382 | 8.32E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene74072 | -0.80519 | 1.50E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene74072 | -0.810409 | 1.17E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene74072 | -0.804971 | 1.67E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene74072 | -0.805814 | 1.11E-49 | -1.69E-46 |
| MS.gene050883 | MS.gene74072 | 0.824957 | 6.09E-54 | -1.69E-46 |
| MS.gene051044 | MS.gene74072 | 0.849453 | 3.20E-60 | -1.69E-46 |
| MS.gene05104 | MS.gene74072 | 0.812435 | 4.25E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene74072 | 0.865271 | 6.66E-65 | -1.69E-46 |
| MS.gene051138 | MS.gene74072 | 0.855703 | 5.28E-62 | -1.69E-46 |
| MS.gene051364 | MS.gene74072 | 0.801588 | 8.39E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene74072 | 0.800041 | 1.74E-48 | -1.69E-46 |
| MS.gene052566 | MS.gene74072 | 0.806496 | 8.00E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene74072 | 0.855957 | 4.45E-62 | -1.69E-46 |
| MS.gene053488 | MS.gene74072 | 0.83556 | 1.56E-56 | -1.69E-46 |
| MS.gene053561 | MS.gene74072 | 0.808259 | 3.38E-50 | -1.69E-46 |
| MS.gene053826 | MS.gene74072 | 0.817507 | 3.18E-52 | -1.69E-46 |
| MS.gene053887 | MS.gene74072 | 0.818268 | 2.14E-52 | -1.69E-46 |
| MS.gene054054 | MS.gene74072 | 0.832941 | 7.09E-56 | -1.69E-46 |
| MS.gene054056 | MS.gene74072 | 0.837599 | 4.73E-57 | -1.69E-46 |
| MS.gene054708 | MS.gene74072 | 0.836525 | 8.89E-57 | -1.69E-46 |
| MS.gene055124 | MS.gene74072 | 0.832988 | 6.90E-56 | -1.69E-46 |
| MS.gene055154 | MS.gene74072 | 0.827979 | 1.16E-54 | -1.69E-46 |
| MS.gene055202 | MS.gene74072 | 0.818529 | 1.87E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene74072 | -0.810225 | 1.28E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene74072 | 0.85872 | 6.79E-63 | -1.69E-46 |
| MS.gene056224 | MS.gene74072 | 0.801729 | 7.85E-49 | -1.69E-46 |
| MS.gene056310 | MS.gene74072 | 0.811567 | 6.56E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene74072 | 0.817779 | 2.76E-52 | -1.69E-46 |
| MS.gene056313 | MS.gene74072 | 0.803831 | 2.89E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene74072 | -0.831389 | 1.72E-55 | -1.69E-46 |
| MS.gene056856 | MS.gene74072 | 0.823352 | 1.45E-53 | -1.69E-46 |
| MS.gene057014 | MS.gene74072 | 0.833661 | 4.69E-56 | -1.69E-46 |
| MS.gene057549 | MS.gene74072 | 0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene058093 | MS.gene74072 | 0.808758 | 2.65E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene74072 | 0.882767 | 7.90E-71 | -1.69E-46 |
| MS.gene058108 | MS.gene74072 | 0.809478 | 1.86E-50 | -1.69E-46 |
| MS.gene058109 | MS.gene74072 | 0.833325 | 5.69E-56 | -1.69E-46 |
| MS.gene058117 | MS.gene74072 | 0.813015 | 3.17E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene74072 | 0.858883 | 6.07E-63 | -1.69E-46 |
| MS.gene058173 | MS.gene74072 | 0.849777 | 2.60E-60 | -1.69E-46 |
| MS.gene058175 | MS.gene74072 | 0.858431 | 8.28E-63 | -1.69E-46 |
| MS.gene058268 | MS.gene74072 | 0.834337 | 3.18E-56 | -1.69E-46 |
| MS.gene058269 | MS.gene74072 | 0.820493 | 6.66E-53 | -1.69E-46 |
| MS.gene058493 | MS.gene74072 | 0.837476 | 5.08E-57 | -1.69E-46 |
| MS.gene058494 | MS.gene74072 | 0.838905 | 2.18E-57 | -1.69E-46 |
| MS.gene058496 | MS.gene74072 | 0.810089 | 1.37E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene74072 | 0.808161 | 3.55E-50 | -1.69E-46 |
| MS.gene058628 | MS.gene74072 | 0.858907 | 5.97E-63 | -1.69E-46 |
| MS.gene058629 | MS.gene74072 | 0.848511 | 5.85E-60 | -1.69E-46 |
| MS.gene058630 | MS.gene74072 | 0.858293 | 9.10E-63 | -1.69E-46 |
| MS.gene059022 | MS.gene74072 | -0.811909 | 5.53E-51 | -1.69E-46 |
| MS.gene059037 | MS.gene74072 | 0.802462 | 5.55E-49 | -1.69E-46 |
| MS.gene059045 | MS.gene74072 | 0.830393 | 3.01E-55 | -1.69E-46 |
| MS.gene059223 | MS.gene74072 | 0.8228 | 1.95E-53 | -1.69E-46 |
| MS.gene059690 | MS.gene74072 | 0.822229 | 2.65E-53 | -1.69E-46 |
| MS.gene059694 | MS.gene74072 | 0.820038 | 8.47E-53 | -1.69E-46 |
| MS.gene059697 | MS.gene74072 | 0.816224 | 6.17E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene74072 | -0.845045 | 5.19E-59 | -1.69E-46 |
| MS.gene059916 | MS.gene74072 | 0.836398 | 9.58E-57 | -1.69E-46 |
| MS.gene060595 | MS.gene74072 | 0.815294 | 9.95E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene74072 | -0.813086 | 3.06E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene74072 | -0.803386 | 3.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74072.t1 | MTR_7g024500 | 92.286 | 350 | 27 | 0 | 1 | 350 | 1 | 350 | 0.0 | 677 |
| MS.gene74072.t1 | MTR_7g024520 | 86.286 | 350 | 48 | 0 | 1 | 350 | 1 | 350 | 0.0 | 632 |
| MS.gene74072.t1 | MTR_4g088345 | 64.407 | 354 | 120 | 2 | 1 | 348 | 1 | 354 | 3.61e-172 | 483 |
| MS.gene74072.t1 | MTR_4g088340 | 64.350 | 331 | 113 | 1 | 23 | 348 | 1 | 331 | 1.60e-159 | 450 |
| MS.gene74072.t1 | MTR_7g014570 | 55.714 | 350 | 148 | 3 | 3 | 348 | 4 | 350 | 3.55e-139 | 399 |
| MS.gene74072.t1 | MTR_1g076940 | 54.494 | 356 | 150 | 5 | 3 | 347 | 4 | 358 | 1.46e-138 | 398 |
| MS.gene74072.t1 | MTR_7g014510 | 52.825 | 354 | 159 | 3 | 2 | 348 | 3 | 355 | 9.94e-133 | 383 |
| MS.gene74072.t1 | MTR_4g088200 | 46.893 | 354 | 178 | 4 | 5 | 348 | 6 | 359 | 4.64e-113 | 333 |
| MS.gene74072.t1 | MTR_4g033150 | 48.603 | 358 | 172 | 4 | 3 | 348 | 4 | 361 | 3.87e-112 | 331 |
| MS.gene74072.t1 | MTR_5g074680 | 46.264 | 348 | 179 | 4 | 9 | 348 | 11 | 358 | 2.41e-111 | 328 |
| MS.gene74072.t1 | MTR_4g033015 | 48.045 | 358 | 174 | 4 | 3 | 348 | 4 | 361 | 5.17e-111 | 328 |
| MS.gene74072.t1 | MTR_4g088190 | 49.582 | 359 | 168 | 5 | 3 | 348 | 4 | 362 | 3.43e-110 | 326 |
| MS.gene74072.t1 | MTR_5g074600 | 46.264 | 348 | 179 | 4 | 9 | 348 | 10 | 357 | 4.97e-110 | 325 |
| MS.gene74072.t1 | MTR_4g033200 | 47.486 | 358 | 176 | 4 | 3 | 348 | 4 | 361 | 1.59e-109 | 324 |
| MS.gene74072.t1 | MTR_5g074580 | 45.402 | 348 | 182 | 4 | 9 | 348 | 11 | 358 | 2.20e-107 | 318 |
| MS.gene74072.t1 | MTR_4g079160 | 44.633 | 354 | 189 | 3 | 1 | 348 | 1 | 353 | 2.83e-107 | 318 |
| MS.gene74072.t1 | MTR_4g033170 | 48.718 | 351 | 172 | 4 | 5 | 348 | 6 | 355 | 1.55e-105 | 313 |
| MS.gene74072.t1 | MTR_4g033085 | 48.148 | 351 | 174 | 4 | 5 | 348 | 6 | 355 | 2.69e-98 | 295 |
| MS.gene74072.t1 | MTR_5g074610 | 41.329 | 346 | 170 | 3 | 9 | 348 | 6 | 324 | 1.07e-94 | 285 |
| MS.gene74072.t1 | MTR_5g074540 | 41.834 | 349 | 181 | 5 | 6 | 348 | 7 | 339 | 8.24e-94 | 283 |
| MS.gene74072.t1 | MTR_1g076930 | 50.633 | 237 | 108 | 4 | 23 | 250 | 1 | 237 | 3.09e-77 | 238 |
| MS.gene74072.t1 | MTR_3g083620 | 37.463 | 339 | 199 | 7 | 19 | 349 | 27 | 360 | 2.58e-73 | 231 |
| MS.gene74072.t1 | MTR_0794s0020 | 42.276 | 246 | 130 | 4 | 3 | 236 | 4 | 249 | 7.25e-65 | 206 |
| MS.gene74072.t1 | MTR_0017s0100 | 34.503 | 342 | 212 | 7 | 15 | 347 | 27 | 365 | 7.41e-58 | 192 |
| MS.gene74072.t1 | MTR_4g038440 | 33.918 | 342 | 214 | 7 | 15 | 347 | 27 | 365 | 5.27e-57 | 189 |
| MS.gene74072.t1 | MTR_0079s0070 | 34.639 | 332 | 205 | 7 | 25 | 347 | 3 | 331 | 1.75e-56 | 187 |
| MS.gene74072.t1 | MTR_3g092900 | 32.578 | 353 | 217 | 12 | 1 | 336 | 1 | 349 | 1.60e-45 | 159 |
| MS.gene74072.t1 | MTR_5g098170 | 32.087 | 321 | 202 | 7 | 29 | 336 | 32 | 349 | 1.74e-43 | 154 |
| MS.gene74072.t1 | MTR_1g096310 | 30.488 | 328 | 200 | 8 | 29 | 336 | 38 | 357 | 2.90e-41 | 148 |
| MS.gene74072.t1 | MTR_7g012090 | 28.909 | 339 | 216 | 8 | 29 | 345 | 38 | 373 | 4.10e-41 | 148 |
| MS.gene74072.t1 | MTR_7g012040 | 27.327 | 333 | 223 | 7 | 29 | 345 | 37 | 366 | 7.83e-41 | 147 |
| MS.gene74072.t1 | MTR_7g012070 | 28.319 | 339 | 218 | 7 | 29 | 345 | 38 | 373 | 8.86e-41 | 147 |
| MS.gene74072.t1 | MTR_1g036510 | 29.499 | 339 | 199 | 6 | 24 | 336 | 44 | 368 | 1.05e-40 | 147 |
| MS.gene74072.t1 | MTR_1g036490 | 28.909 | 339 | 201 | 6 | 24 | 336 | 30 | 354 | 1.96e-40 | 146 |
| MS.gene74072.t1 | MTR_1g036460 | 28.736 | 348 | 206 | 7 | 17 | 336 | 21 | 354 | 1.44e-38 | 141 |
| MS.gene74072.t1 | MTR_7g011900 | 27.246 | 334 | 223 | 7 | 29 | 345 | 38 | 368 | 2.32e-38 | 140 |
| MS.gene74072.t1 | MTR_8g068870 | 27.219 | 338 | 226 | 7 | 11 | 331 | 10 | 344 | 4.49e-38 | 139 |
| MS.gene74072.t1 | MTR_7g118300 | 29.412 | 323 | 212 | 7 | 25 | 335 | 42 | 360 | 1.05e-37 | 139 |
| MS.gene74072.t1 | MTR_7g012020 | 27.848 | 316 | 212 | 6 | 29 | 331 | 37 | 349 | 1.46e-37 | 138 |
| MS.gene74072.t1 | MTR_0591s0010 | 26.625 | 323 | 218 | 7 | 25 | 332 | 41 | 359 | 1.90e-37 | 138 |
| MS.gene74072.t1 | MTR_7g011990 | 27.358 | 318 | 208 | 10 | 29 | 331 | 38 | 347 | 4.76e-37 | 137 |
| MS.gene74072.t1 | MTR_8g068750 | 27.414 | 321 | 216 | 8 | 25 | 331 | 41 | 358 | 7.53e-37 | 137 |
| MS.gene74072.t1 | MTR_7g118320 | 27.566 | 341 | 215 | 10 | 11 | 331 | 15 | 343 | 2.24e-35 | 132 |
| MS.gene74072.t1 | MTR_8g024160 | 29.630 | 324 | 170 | 10 | 25 | 335 | 35 | 313 | 4.38e-35 | 130 |
| MS.gene74072.t1 | MTR_2g055940 | 26.480 | 321 | 217 | 7 | 29 | 335 | 32 | 347 | 4.26e-34 | 129 |
| MS.gene74072.t1 | MTR_3g021430 | 28.135 | 327 | 216 | 8 | 32 | 345 | 30 | 350 | 1.80e-33 | 127 |
| MS.gene74072.t1 | MTR_8g068690 | 26.791 | 321 | 218 | 6 | 25 | 331 | 40 | 357 | 9.94e-33 | 125 |
| MS.gene74072.t1 | MTR_3g021440 | 26.498 | 317 | 217 | 7 | 32 | 336 | 43 | 355 | 1.13e-32 | 125 |
| MS.gene74072.t1 | MTR_6g078850 | 26.685 | 356 | 221 | 11 | 25 | 349 | 45 | 391 | 7.53e-32 | 125 |
| MS.gene74072.t1 | MTR_3g096050 | 28.994 | 338 | 212 | 12 | 29 | 348 | 29 | 356 | 2.33e-31 | 121 |
| MS.gene74072.t1 | MTR_8g068570 | 27.211 | 294 | 179 | 5 | 25 | 309 | 41 | 308 | 8.14e-31 | 119 |
| MS.gene74072.t1 | MTR_2g072790 | 27.778 | 342 | 212 | 11 | 29 | 349 | 26 | 353 | 4.09e-30 | 118 |
| MS.gene74072.t1 | MTR_4g038440 | 30.738 | 244 | 161 | 4 | 15 | 250 | 27 | 270 | 1.03e-28 | 112 |
| MS.gene74072.t1 | MTR_3g096070 | 28.440 | 327 | 205 | 11 | 29 | 348 | 29 | 333 | 1.82e-28 | 113 |
| MS.gene74072.t1 | MTR_8g068730 | 25.786 | 318 | 193 | 8 | 25 | 331 | 41 | 326 | 1.55e-27 | 110 |
| MS.gene74072.t1 | MTR_7g012020 | 27.197 | 239 | 161 | 5 | 29 | 254 | 37 | 275 | 2.38e-24 | 101 |
| MS.gene74072.t1 | MTR_1g050220 | 36.054 | 147 | 81 | 2 | 185 | 331 | 151 | 284 | 4.33e-24 | 100 |
| MS.gene74072.t1 | MTR_1g036510 | 28.458 | 253 | 144 | 5 | 24 | 250 | 44 | 285 | 1.92e-21 | 93.2 |
| MS.gene74072.t1 | MTR_8g068600 | 25.877 | 228 | 156 | 5 | 37 | 251 | 27 | 254 | 6.04e-20 | 89.0 |
| MS.gene74072.t1 | MTR_8g068740 | 25.600 | 250 | 147 | 6 | 25 | 264 | 41 | 261 | 6.08e-19 | 85.9 |
| MS.gene74072.t1 | MTR_8g068690 | 25.403 | 248 | 160 | 6 | 25 | 253 | 40 | 281 | 4.46e-18 | 83.6 |
| MS.gene74072.t1 | MTR_8g068620 | 39.175 | 97 | 59 | 0 | 157 | 253 | 17 | 113 | 1.66e-17 | 77.8 |
| MS.gene74072.t1 | MTR_7g012020 | 25.604 | 207 | 141 | 5 | 29 | 222 | 37 | 243 | 1.17e-15 | 76.3 |
| MS.gene74072.t1 | MTR_3g096050 | 28.631 | 241 | 149 | 10 | 29 | 253 | 29 | 262 | 6.59e-15 | 74.3 |
| MS.gene74072.t1 | MTR_1g036510 | 26.222 | 225 | 129 | 5 | 24 | 222 | 44 | 257 | 1.02e-13 | 70.9 |
| MS.gene74072.t1 | MTR_4g025570 | 45.679 | 81 | 40 | 3 | 252 | 331 | 122 | 199 | 1.33e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74072.t1 | AT4G35150 | 35.735 | 347 | 171 | 10 | 14 | 346 | 12 | 320 | 1.42e-57 | 190 |
| MS.gene74072.t1 | AT4G35160 | 36.490 | 359 | 195 | 13 | 14 | 346 | 26 | 377 | 4.80e-53 | 179 |
| MS.gene74072.t1 | AT5G54160 | 32.530 | 332 | 207 | 9 | 29 | 348 | 33 | 359 | 7.57e-49 | 168 |
| MS.gene74072.t1 | AT1G51990 | 32.857 | 280 | 162 | 8 | 85 | 348 | 91 | 360 | 9.38e-41 | 147 |
| MS.gene74072.t1 | AT1G51990 | 32.857 | 280 | 162 | 8 | 85 | 348 | 91 | 360 | 1.09e-40 | 147 |
| MS.gene74072.t1 | AT3G53140 | 30.233 | 344 | 204 | 11 | 29 | 348 | 26 | 357 | 4.42e-35 | 131 |
| MS.gene74072.t1 | AT1G33030 | 29.430 | 316 | 206 | 8 | 29 | 331 | 20 | 331 | 5.01e-35 | 131 |
| MS.gene74072.t1 | AT1G77520 | 25.581 | 344 | 225 | 10 | 29 | 348 | 43 | 379 | 2.50e-31 | 122 |
| MS.gene74072.t1 | AT1G63140 | 28.125 | 352 | 218 | 11 | 23 | 348 | 37 | 379 | 1.02e-28 | 115 |
| MS.gene74072.t1 | AT1G63140 | 28.125 | 352 | 218 | 11 | 23 | 348 | 57 | 399 | 1.54e-28 | 114 |
| MS.gene74072.t1 | AT5G53810 | 30.058 | 346 | 208 | 12 | 29 | 348 | 39 | 376 | 2.74e-28 | 113 |
| MS.gene74072.t1 | AT1G62900 | 33.171 | 205 | 130 | 5 | 147 | 348 | 3 | 203 | 8.10e-27 | 105 |
| MS.gene74072.t1 | AT1G77530 | 27.746 | 346 | 215 | 11 | 29 | 348 | 43 | 379 | 1.30e-24 | 103 |
| MS.gene74072.t1 | AT5G37170 | 32.597 | 181 | 110 | 6 | 157 | 331 | 41 | 215 | 4.72e-22 | 93.6 |
| MS.gene74072.t1 | AT5G37170 | 32.597 | 181 | 110 | 6 | 157 | 331 | 141 | 315 | 7.14e-22 | 95.1 |
| MS.gene74072.t1 | AT1G21130 | 26.748 | 329 | 202 | 12 | 29 | 331 | 39 | 354 | 1.41e-21 | 94.7 |
| MS.gene74072.t1 | AT1G21100 | 27.356 | 329 | 200 | 13 | 29 | 331 | 39 | 354 | 2.52e-20 | 91.3 |
| MS.gene74072.t1 | AT5G37170 | 32.749 | 171 | 104 | 6 | 167 | 331 | 2 | 167 | 7.88e-20 | 86.3 |
| MS.gene74072.t1 | AT1G76790 | 27.576 | 330 | 200 | 13 | 29 | 331 | 29 | 346 | 9.00e-20 | 89.7 |
| MS.gene74072.t1 | AT1G21110 | 25.610 | 328 | 207 | 11 | 29 | 331 | 39 | 354 | 1.43e-19 | 89.4 |
| MS.gene74072.t1 | AT1G21120 | 25.305 | 328 | 211 | 10 | 29 | 334 | 39 | 354 | 1.58e-18 | 86.3 |
| MS.gene74072.t1 | AT1G21120 | 25.305 | 328 | 211 | 10 | 29 | 334 | 87 | 402 | 2.33e-18 | 85.9 |
| MS.gene74072.t1 | AT1G33030 | 26.496 | 234 | 159 | 6 | 29 | 250 | 20 | 252 | 2.99e-15 | 75.1 |
| MS.gene74072.t1 | AT1G33030 | 26.496 | 234 | 159 | 6 | 29 | 250 | 20 | 252 | 6.34e-15 | 74.3 |
| MS.gene74072.t1 | AT1G63140 | 26.531 | 245 | 152 | 6 | 29 | 250 | 63 | 302 | 2.41e-11 | 64.3 |
Find 54 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTTCATGCAACAAAATT+TGG | 0.164531 | 7.4:+76833464 | MS.gene74072:CDS |
| TACAAAATATTTCCTATATT+TGG | 0.180034 | 7.4:+76834478 | MS.gene74072:CDS |
| TAATAGGTTCGCCATGATTT+TGG | 0.194358 | 7.4:-76833152 | None:intergenic |
| TCACAGTGTCATGCGTTTAT+TGG | 0.252473 | 7.4:+76833230 | MS.gene74072:CDS |
| ACAAGCTCAGGAAGAGTAAT+AGG | 0.291026 | 7.4:-76833168 | None:intergenic |
| CAATCTTTGAGACTACATTA+TGG | 0.292380 | 7.4:+76833442 | MS.gene74072:CDS |
| GTTAATCCTTCTACCACATT+TGG | 0.348422 | 7.4:-76833672 | None:intergenic |
| AATCTTTGAGACTACATTAT+GGG | 0.349412 | 7.4:+76833443 | MS.gene74072:CDS |
| TGATCATTGTTTAACTTCAA+TGG | 0.378501 | 7.4:+76833344 | MS.gene74072:CDS |
| AATATTATCAATTGAGCAAA+TGG | 0.394667 | 7.4:+76833400 | MS.gene74072:CDS |
| TTTAACTTCAATGGTTAAGA+TGG | 0.403378 | 7.4:+76833353 | MS.gene74072:CDS |
| TTAACTTCTTTGGTTGATGT+TGG | 0.411610 | 7.4:+76833576 | MS.gene74072:CDS |
| ACTTCTTTGGTTGATGTTGG+AGG | 0.420904 | 7.4:+76833579 | MS.gene74072:CDS |
| GACCTTCCAAATGTGGTAGA+AGG | 0.429597 | 7.4:+76833666 | MS.gene74072:CDS |
| ATTGTAAAGAAGCTGCTTCA+AGG | 0.431595 | 7.4:+76834278 | MS.gene74072:CDS |
| AGTGACCTAAAACCAAATAT+AGG | 0.433185 | 7.4:-76834490 | None:intergenic |
| TACTCTTCCTGAGCTTGTCT+CGG | 0.435364 | 7.4:+76833173 | MS.gene74072:CDS |
| CATGACACTGTGAACACAAC+CGG | 0.451299 | 7.4:-76833220 | None:intergenic |
| AAATGTGGTAGAAGGATTAA+CGG | 0.461848 | 7.4:+76833674 | MS.gene74072:CDS |
| AGACATTGTGATAAATGAAA+AGG | 0.464272 | 7.4:+76834330 | MS.gene74072:CDS |
| ATCAAGTGGGCTGTTGAACT+TGG | 0.469328 | 7.4:+76833114 | MS.gene74072:CDS |
| AATGTGGTAGAAGGATTAAC+GGG | 0.469980 | 7.4:+76833675 | MS.gene74072:CDS |
| GTTGATGTTGGAGGTGGAAC+CGG | 0.470193 | 7.4:+76833588 | MS.gene74072:CDS |
| TAATATTTATCAACCATGGT+AGG | 0.470597 | 7.4:-76833384 | None:intergenic |
| AAGAAAATCATAACAGAAGC+AGG | 0.478707 | 7.4:+76834445 | MS.gene74072:CDS |
| GTAAAATTGCATCAGCTTGA+GGG | 0.481886 | 7.4:-76833743 | None:intergenic |
| AGTAAAATTGCATCAGCTTG+AGG | 0.494453 | 7.4:-76833744 | None:intergenic |
| TTCACAAGAAGCTTTGATGT+TGG | 0.499286 | 7.4:-76833315 | None:intergenic |
| AATCTTCGCAATTGTCAAGA+TGG | 0.505388 | 7.4:+76833263 | MS.gene74072:CDS |
| CTGCTTTGATATAACTATGA+TGG | 0.505550 | 7.4:+76834384 | MS.gene74072:CDS |
| CACGGTTAAAATTATTTGTG+AGG | 0.517597 | 7.4:+76833614 | MS.gene74072:CDS |
| CGAAGAGCCGAGACAAGCTC+AGG | 0.517956 | 7.4:-76833180 | None:intergenic |
| AATATTTATCAACCATGGTA+GGG | 0.522593 | 7.4:-76833383 | None:intergenic |
| CCAGATATAATCCAAAATCA+TGG | 0.539133 | 7.4:+76833141 | MS.gene74072:CDS |
| ACATCAAAGCTTCTTGTGAA+AGG | 0.547089 | 7.4:+76833318 | MS.gene74072:CDS |
| TGAGACCCGCGTCGATCAAG+TGG | 0.547754 | 7.4:+76833100 | MS.gene74072:CDS |
| CGAATTCCAGAAGCAAAAGC+CGG | 0.553157 | 7.4:+76833201 | MS.gene74072:CDS |
| TCTTTGGTTGATGTTGGAGG+TGG | 0.553343 | 7.4:+76833582 | MS.gene74072:CDS |
| ATCCTTCTACCACATTTGGA+AGG | 0.561989 | 7.4:-76833668 | None:intergenic |
| AATTGCATCAGCTTGAGGGA+TGG | 0.574477 | 7.4:-76833739 | None:intergenic |
| TTGATAATATTTATCAACCA+TGG | 0.592376 | 7.4:-76833388 | None:intergenic |
| GAAGCTATTCAATGATGCTA+TGG | 0.595485 | 7.4:+76833494 | MS.gene74072:CDS |
| ATTGAGCAAATGGACATCTA+CGG | 0.596800 | 7.4:+76833410 | MS.gene74072:CDS |
| AGTGTTCGACCTTCCAAATG+TGG | 0.610487 | 7.4:+76833659 | MS.gene74072:CDS |
| TGTCAAGATGGACGACAACA+AGG | 0.611834 | 7.4:+76833275 | MS.gene74072:CDS |
| AGAGTGATTCTAATATGATG+AGG | 0.631037 | 7.4:+76833517 | MS.gene74072:CDS |
| ACAGCCCACTTGATCGACGC+GGG | 0.642324 | 7.4:-76833105 | None:intergenic |
| GCTTCAAGGCAAAACAAAGG+AGG | 0.643659 | 7.4:+76834292 | MS.gene74072:CDS |
| TGGAGGTGGAACCGGAAACA+CGG | 0.653524 | 7.4:+76833596 | MS.gene74072:CDS |
| GATGGTAACAAACCCTACCA+TGG | 0.661901 | 7.4:+76833371 | MS.gene74072:CDS |
| GCTGCTTCAAGGCAAAACAA+AGG | 0.669930 | 7.4:+76834289 | MS.gene74072:CDS |
| GAGACCCGCGTCGATCAAGT+GGG | 0.673235 | 7.4:+76833101 | MS.gene74072:CDS |
| GAGCAAATGGACATCTACGG+AGG | 0.717467 | 7.4:+76833413 | MS.gene74072:CDS |
| AACAGCCCACTTGATCGACG+CGG | 0.727407 | 7.4:-76833106 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTGTTTTTTTTGAA+GGG | + | chr7.4:76834066-76834085 | MS.gene74072:intron | 10.0% |
| !!! | TTTTATTTTGTTTTTTTTGA+AGG | + | chr7.4:76834065-76834084 | MS.gene74072:intron | 10.0% |
| !! | AAAAAAAAACATAGATAAGA+AGG | + | chr7.4:76833973-76833992 | MS.gene74072:intron | 15.0% |
| !! | AAAAAAAACATAGATAAGAA+GGG | + | chr7.4:76833974-76833993 | MS.gene74072:intron | 15.0% |
| !! | TACAAAATATTTCCTATATT+TGG | + | chr7.4:76834478-76834497 | MS.gene74072:CDS | 15.0% |
| !! | TTAAGCTAATTAATAATGTA+TGG | - | chr7.4:76834189-76834208 | None:intergenic | 15.0% |
| !! | AAAAAACTATGATACTATCT+TGG | - | chr7.4:76834047-76834066 | None:intergenic | 20.0% |
| !! | AATATTATCAATTGAGCAAA+TGG | + | chr7.4:76833400-76833419 | MS.gene74072:CDS | 20.0% |
| !!! | AATAACTATCTAAGTTTTGT+CGG | + | chr7.4:76833699-76833718 | MS.gene74072:CDS | 20.0% |
| !!! | TAACAATACTTTGTTATGTA+TGG | - | chr7.4:76834164-76834183 | None:intergenic | 20.0% |
| !!! | TATTTCCTATATTTGGTTTT+AGG | + | chr7.4:76834485-76834504 | MS.gene74072:CDS | 20.0% |
| !!! | TTCCTTTTCATTTTTATAGT+GGG | + | chr7.4:76834210-76834229 | MS.gene74072:intron | 20.0% |
| !!! | TTGATAATATTTATCAACCA+TGG | - | chr7.4:76833391-76833410 | None:intergenic | 20.0% |
| !!! | TTTCCTTTTCATTTTTATAG+TGG | + | chr7.4:76834209-76834228 | MS.gene74072:intron | 20.0% |
| ! | AACCCACTATAAAAATGAAA+AGG | - | chr7.4:76834215-76834234 | None:intergenic | 25.0% |
| ! | AAGGTACGTATTAATTCAAA+GGG | + | chr7.4:76833768-76833787 | MS.gene74072:intron | 25.0% |
| ! | AATATTTATCAACCATGGTA+GGG | - | chr7.4:76833386-76833405 | None:intergenic | 25.0% |
| ! | AGACATTGTGATAAATGAAA+AGG | + | chr7.4:76834330-76834349 | MS.gene74072:CDS | 25.0% |
| ! | AGTGTAAAACATAGATAAGA+AGG | + | chr7.4:76833859-76833878 | MS.gene74072:intron | 25.0% |
| ! | GTGTAAAACATAGATAAGAA+GGG | + | chr7.4:76833860-76833879 | MS.gene74072:intron | 25.0% |
| ! | TAATATTTATCAACCATGGT+AGG | - | chr7.4:76833387-76833406 | None:intergenic | 25.0% |
| ! | TTAATTCAAAGGGAAATGAA+TGG | + | chr7.4:76833778-76833797 | MS.gene74072:intron | 25.0% |
| !! | ATGTTTTACACTTTTACTTC+AGG | - | chr7.4:76833851-76833870 | None:intergenic | 25.0% |
| !! | TGATCATTGTTTAACTTCAA+TGG | + | chr7.4:76833344-76833363 | MS.gene74072:CDS | 25.0% |
| !! | TTTAACTTCAATGGTTAAGA+TGG | + | chr7.4:76833353-76833372 | MS.gene74072:CDS | 25.0% |
| !!! | AACACTATACATTTTAACGT+AGG | - | chr7.4:76833645-76833664 | None:intergenic | 25.0% |
| !!! | AATAATTTTAACCGTGTTTC+CGG | - | chr7.4:76833610-76833629 | None:intergenic | 25.0% |
| !!! | AATCTTTGAGACTACATTAT+GGG | + | chr7.4:76833443-76833462 | MS.gene74072:CDS | 25.0% |
| AAATGTGGTAGAAGGATTAA+CGG | + | chr7.4:76833674-76833693 | MS.gene74072:CDS | 30.0% | |
| AAGAAAATCATAACAGAAGC+AGG | + | chr7.4:76834445-76834464 | MS.gene74072:CDS | 30.0% | |
| AGAGTGATTCTAATATGATG+AGG | + | chr7.4:76833517-76833536 | MS.gene74072:CDS | 30.0% | |
| AGTGACCTAAAACCAAATAT+AGG | - | chr7.4:76834493-76834512 | None:intergenic | 30.0% | |
| ATAGATTCGCAATTAGGTAA+AGG | - | chr7.4:76833815-76833834 | None:intergenic | 30.0% | |
| CAAGGTACGTATTAATTCAA+AGG | + | chr7.4:76833767-76833786 | MS.gene74072:intron | 30.0% | |
| CACGGTTAAAATTATTTGTG+AGG | + | chr7.4:76833614-76833633 | MS.gene74072:CDS | 30.0% | |
| CCAGATATAATCCAAAATCA+TGG | + | chr7.4:76833141-76833160 | MS.gene74072:CDS | 30.0% | |
| CTAATTGCGAATCTATATGT+CGG | + | chr7.4:76833819-76833838 | MS.gene74072:intron | 30.0% | |
| CTGCTTTGATATAACTATGA+TGG | + | chr7.4:76834384-76834403 | MS.gene74072:CDS | 30.0% | |
| GAGAAAGAGATGAAAAAACA+TGG | + | chr7.4:76834422-76834441 | MS.gene74072:CDS | 30.0% | |
| GGATTTCATGCAACAAAATT+TGG | + | chr7.4:76833464-76833483 | MS.gene74072:CDS | 30.0% | |
| TGAACTTAACTTAGGAAGAA+AGG | + | chr7.4:76833889-76833908 | MS.gene74072:intron | 30.0% | |
| TTCTTCCTAAGTTAAGTTCA+CGG | - | chr7.4:76833889-76833908 | None:intergenic | 30.0% | |
| ! | CCATGATTTTGGATTATATC+TGG | - | chr7.4:76833144-76833163 | None:intergenic | 30.0% |
| ! | GATTGCAAAACAGTTTTTGA+GGG | + | chr7.4:76833552-76833571 | MS.gene74072:CDS | 30.0% |
| ! | TGATTGCAAAACAGTTTTTG+AGG | + | chr7.4:76833551-76833570 | MS.gene74072:CDS | 30.0% |
| ! | TTAACTTCTTTGGTTGATGT+TGG | + | chr7.4:76833576-76833595 | MS.gene74072:CDS | 30.0% |
| !! | CAATCTTTGAGACTACATTA+TGG | + | chr7.4:76833442-76833461 | MS.gene74072:CDS | 30.0% |
| !!! | ACCTTTTTAAGATGAATACG+TGG | - | chr7.4:76833920-76833939 | None:intergenic | 30.0% |
| !!! | CCTTTTTAAGATGAATACGT+GGG | - | chr7.4:76833919-76833938 | None:intergenic | 30.0% |
| !!! | CTTTTTAAGATGAATACGTG+GGG | - | chr7.4:76833918-76833937 | None:intergenic | 30.0% |
| !!! | TTGCTTTTTAAGTAGCCTAA+CGG | - | chr7.4:76833953-76833972 | None:intergenic | 30.0% |
| AATCTTCGCAATTGTCAAGA+TGG | + | chr7.4:76833263-76833282 | MS.gene74072:CDS | 35.0% | |
| AATGTGGTAGAAGGATTAAC+GGG | + | chr7.4:76833675-76833694 | MS.gene74072:CDS | 35.0% | |
| ACATCAAAGCTTCTTGTGAA+AGG | + | chr7.4:76833318-76833337 | MS.gene74072:CDS | 35.0% | |
| AGTAAAATTGCATCAGCTTG+AGG | - | chr7.4:76833747-76833766 | None:intergenic | 35.0% | |
| ATTGAGCAAATGGACATCTA+CGG | + | chr7.4:76833410-76833429 | MS.gene74072:CDS | 35.0% | |
| ATTGTAAAGAAGCTGCTTCA+AGG | + | chr7.4:76834278-76834297 | MS.gene74072:CDS | 35.0% | |
| CCCACGTATTCATCTTAAAA+AGG | + | chr7.4:76833916-76833935 | MS.gene74072:intron | 35.0% | |
| CGACATATAGATTCGCAATT+AGG | - | chr7.4:76833821-76833840 | None:intergenic | 35.0% | |
| GAAGCTATTCAATGATGCTA+TGG | + | chr7.4:76833494-76833513 | MS.gene74072:CDS | 35.0% | |
| GTAAAATTGCATCAGCTTGA+GGG | - | chr7.4:76833746-76833765 | None:intergenic | 35.0% | |
| GTTAATCCTTCTACCACATT+TGG | - | chr7.4:76833675-76833694 | None:intergenic | 35.0% | |
| TCTTCCTAAGTTAAGTTCAC+GGG | - | chr7.4:76833888-76833907 | None:intergenic | 35.0% | |
| ! | AGCTGATGCAATTTTACTCA+AGG | + | chr7.4:76833749-76833768 | MS.gene74072:CDS | 35.0% |
| ! | TAATAGGTTCGCCATGATTT+TGG | - | chr7.4:76833155-76833174 | None:intergenic | 35.0% |
| ! | TTCACAAGAAGCTTTGATGT+TGG | - | chr7.4:76833318-76833337 | None:intergenic | 35.0% |
| !! | AACTATCTAAGTTTTGTCGG+CGG | + | chr7.4:76833702-76833721 | MS.gene74072:CDS | 35.0% |
| !! | TTTTGAGGGCTTAACTTCTT+TGG | + | chr7.4:76833566-76833585 | MS.gene74072:CDS | 35.0% |
| !!! | TATAGTGGGTTTTGCATAAC+TGG | + | chr7.4:76834224-76834243 | MS.gene74072:intron | 35.0% |
| ACAAGCTCAGGAAGAGTAAT+AGG | - | chr7.4:76833171-76833190 | None:intergenic | 40.0% | |
| ATCCTTCTACCACATTTGGA+AGG | - | chr7.4:76833671-76833690 | None:intergenic | 40.0% | |
| TCACAGTGTCATGCGTTTAT+TGG | + | chr7.4:76833230-76833249 | MS.gene74072:CDS | 40.0% | |
| ! | ACTTCTTTGGTTGATGTTGG+AGG | + | chr7.4:76833579-76833598 | MS.gene74072:CDS | 40.0% |
| !! | AAGGTGAATTTCTAGCCGTT+AGG | + | chr7.4:76833935-76833954 | MS.gene74072:intron | 40.0% |
| AATTGCATCAGCTTGAGGGA+TGG | - | chr7.4:76833742-76833761 | None:intergenic | 45.0% | |
| AGTGTTCGACCTTCCAAATG+TGG | + | chr7.4:76833659-76833678 | MS.gene74072:CDS | 45.0% | |
| CATGACACTGTGAACACAAC+CGG | - | chr7.4:76833223-76833242 | None:intergenic | 45.0% | |
| CGAATTCCAGAAGCAAAAGC+CGG | + | chr7.4:76833201-76833220 | MS.gene74072:CDS | 45.0% | |
| GACCTTCCAAATGTGGTAGA+AGG | + | chr7.4:76833666-76833685 | MS.gene74072:CDS | 45.0% | |
| GATGGTAACAAACCCTACCA+TGG | + | chr7.4:76833371-76833390 | MS.gene74072:CDS | 45.0% | |
| GCTGCTTCAAGGCAAAACAA+AGG | + | chr7.4:76834289-76834308 | MS.gene74072:CDS | 45.0% | |
| GCTTCAAGGCAAAACAAAGG+AGG | + | chr7.4:76834292-76834311 | MS.gene74072:CDS | 45.0% | |
| GGTACCCGTGAACTTAACTT+AGG | + | chr7.4:76833881-76833900 | MS.gene74072:intron | 45.0% | |
| TACTCTTCCTGAGCTTGTCT+CGG | + | chr7.4:76833173-76833192 | MS.gene74072:CDS | 45.0% | |
| TGTCAAGATGGACGACAACA+AGG | + | chr7.4:76833275-76833294 | MS.gene74072:CDS | 45.0% | |
| ! | TCTTTGGTTGATGTTGGAGG+TGG | + | chr7.4:76833582-76833601 | MS.gene74072:CDS | 45.0% |
| !! | ATCAAGTGGGCTGTTGAACT+TGG | + | chr7.4:76833114-76833133 | MS.gene74072:CDS | 45.0% |
| GAGCAAATGGACATCTACGG+AGG | + | chr7.4:76833413-76833432 | MS.gene74072:CDS | 50.0% | |
| GTTGATGTTGGAGGTGGAAC+CGG | + | chr7.4:76833588-76833607 | MS.gene74072:CDS | 50.0% | |
| !! | ACACAACCGGCTTTTGCTTC+TGG | - | chr7.4:76833210-76833229 | None:intergenic | 50.0% |
| AACAGCCCACTTGATCGACG+CGG | - | chr7.4:76833109-76833128 | None:intergenic | 55.0% | |
| TGGAGGTGGAACCGGAAACA+CGG | + | chr7.4:76833596-76833615 | MS.gene74072:CDS | 55.0% | |
| ACAGCCCACTTGATCGACGC+GGG | - | chr7.4:76833108-76833127 | None:intergenic | 60.0% | |
| CGAAGAGCCGAGACAAGCTC+AGG | - | chr7.4:76833183-76833202 | None:intergenic | 60.0% | |
| ! | GAGACCCGCGTCGATCAAGT+GGG | + | chr7.4:76833101-76833120 | MS.gene74072:CDS | 60.0% |
| ! | TGAGACCCGCGTCGATCAAG+TGG | + | chr7.4:76833100-76833119 | MS.gene74072:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 76833021 | 76834531 | 76833021 | ID=MS.gene74072 |
| chr7.4 | mRNA | 76833021 | 76834531 | 76833021 | ID=MS.gene74072.t1;Parent=MS.gene74072 |
| chr7.4 | exon | 76833021 | 76833770 | 76833021 | ID=MS.gene74072.t1.exon1;Parent=MS.gene74072.t1 |
| chr7.4 | CDS | 76833021 | 76833770 | 76833021 | ID=cds.MS.gene74072.t1;Parent=MS.gene74072.t1 |
| chr7.4 | exon | 76834229 | 76834531 | 76834229 | ID=MS.gene74072.t1.exon2;Parent=MS.gene74072.t1 |
| chr7.4 | CDS | 76834229 | 76834531 | 76834229 | ID=cds.MS.gene74072.t1;Parent=MS.gene74072.t1 |
| Gene Sequence |
| Protein sequence |
