Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76643.t1 | XP_024638485.1 | 97.2 | 713 | 20 | 0 | 1 | 713 | 1 | 713 | 0.00E+00 | 1360.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76643.t1 | Q9MA15 | 72.4 | 700 | 184 | 1 | 22 | 712 | 8 | 707 | 1.0e-293 | 1010.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76643.t1 | G7JFX0 | 97.2 | 713 | 20 | 0 | 1 | 713 | 1 | 713 | 0.0e+00 | 1360.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene76643 | 0.807483 | 4.94E-50 | -1.69E-46 |
| MS.gene049150 | MS.gene76643 | 0.837405 | 5.30E-57 | -1.69E-46 |
| MS.gene049151 | MS.gene76643 | 0.825822 | 3.80E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene76643 | 0.837988 | 3.76E-57 | -1.69E-46 |
| MS.gene049230 | MS.gene76643 | 0.826794 | 2.23E-54 | -1.69E-46 |
| MS.gene049260 | MS.gene76643 | 0.803695 | 3.08E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene76643 | 0.854126 | 1.51E-61 | -1.69E-46 |
| MS.gene049346 | MS.gene76643 | 0.806029 | 1.00E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene76643 | 0.853643 | 2.09E-61 | -1.69E-46 |
| MS.gene049758 | MS.gene76643 | 0.82004 | 8.46E-53 | -1.69E-46 |
| MS.gene049910 | MS.gene76643 | 0.818904 | 1.54E-52 | -1.69E-46 |
| MS.gene049993 | MS.gene76643 | 0.811437 | 7.01E-51 | -1.69E-46 |
| MS.gene050168 | MS.gene76643 | 0.803342 | 3.65E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene76643 | 0.844057 | 9.57E-59 | -1.69E-46 |
| MS.gene050227 | MS.gene76643 | 0.858569 | 7.53E-63 | -1.69E-46 |
| MS.gene050228 | MS.gene76643 | 0.855577 | 5.75E-62 | -1.69E-46 |
| MS.gene050330 | MS.gene76643 | -0.8493 | 3.53E-60 | -1.69E-46 |
| MS.gene050426 | MS.gene76643 | -0.837457 | 5.14E-57 | -1.69E-46 |
| MS.gene050558 | MS.gene76643 | 0.830939 | 2.21E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene76643 | -0.842518 | 2.46E-58 | -1.69E-46 |
| MS.gene050642 | MS.gene76643 | 0.916395 | 1.88E-85 | -1.69E-46 |
| MS.gene050820 | MS.gene76643 | 0.828471 | 8.83E-55 | -1.69E-46 |
| MS.gene051171 | MS.gene76643 | 0.80269 | 4.98E-49 | -1.69E-46 |
| MS.gene051240 | MS.gene76643 | 0.82511 | 5.60E-54 | -1.69E-46 |
| MS.gene051257 | MS.gene76643 | 0.814561 | 1.45E-51 | -1.69E-46 |
| MS.gene05137 | MS.gene76643 | 0.81162 | 6.39E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene76643 | 0.800978 | 1.12E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene76643 | 0.835891 | 1.29E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene76643 | 0.913187 | 8.23E-84 | -1.69E-46 |
| MS.gene052011 | MS.gene76643 | -0.837014 | 6.67E-57 | -1.69E-46 |
| MS.gene052077 | MS.gene76643 | 0.853621 | 2.12E-61 | -1.69E-46 |
| MS.gene052176 | MS.gene76643 | 0.884878 | 1.32E-71 | -1.69E-46 |
| MS.gene052253 | MS.gene76643 | 0.807757 | 4.33E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene76643 | -0.847912 | 8.57E-60 | -1.69E-46 |
| MS.gene052340 | MS.gene76643 | 0.832285 | 1.03E-55 | -1.69E-46 |
| MS.gene052376 | MS.gene76643 | 0.802024 | 6.83E-49 | -1.69E-46 |
| MS.gene052389 | MS.gene76643 | 0.849604 | 2.91E-60 | -1.69E-46 |
| MS.gene052600 | MS.gene76643 | 0.873392 | 1.52E-67 | -1.69E-46 |
| MS.gene053330 | MS.gene76643 | 0.823038 | 1.72E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene76643 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene76643 | 0.854092 | 1.55E-61 | -1.69E-46 |
| MS.gene053907 | MS.gene76643 | 0.809864 | 1.53E-50 | -1.69E-46 |
| MS.gene053928 | MS.gene76643 | 0.821839 | 3.26E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene76643 | 0.826307 | 2.92E-54 | -1.69E-46 |
| MS.gene054349 | MS.gene76643 | 0.803247 | 3.82E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene76643 | 0.800173 | 1.63E-48 | -1.69E-46 |
| MS.gene054537 | MS.gene76643 | 0.802944 | 4.41E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene76643 | 0.821627 | 3.65E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene76643 | 0.841447 | 4.73E-58 | -1.69E-46 |
| MS.gene054942 | MS.gene76643 | 0.851292 | 9.76E-61 | -1.69E-46 |
| MS.gene054983 | MS.gene76643 | 0.838614 | 2.59E-57 | -1.69E-46 |
| MS.gene055217 | MS.gene76643 | 0.801731 | 7.84E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene76643 | 0.804854 | 1.77E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene76643 | 0.817586 | 3.05E-52 | -1.69E-46 |
| MS.gene055367 | MS.gene76643 | 0.80866 | 2.78E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene76643 | 0.857377 | 1.70E-62 | -1.69E-46 |
| MS.gene055701 | MS.gene76643 | 0.839486 | 1.54E-57 | -1.69E-46 |
| MS.gene056087 | MS.gene76643 | 0.815864 | 7.43E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene76643 | 0.815119 | 1.09E-51 | -1.69E-46 |
| MS.gene056723 | MS.gene76643 | 0.821574 | 3.76E-53 | -1.69E-46 |
| MS.gene056875 | MS.gene76643 | 0.800425 | 1.45E-48 | -1.69E-46 |
| MS.gene056979 | MS.gene76643 | 0.903586 | 2.98E-79 | -1.69E-46 |
| MS.gene057121 | MS.gene76643 | 0.840165 | 1.02E-57 | -1.69E-46 |
| MS.gene057396 | MS.gene76643 | 0.806497 | 7.99E-50 | -1.69E-46 |
| MS.gene057639 | MS.gene76643 | 0.815142 | 1.08E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene76643 | 0.827358 | 1.63E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene76643 | 0.819521 | 1.11E-52 | -1.69E-46 |
| MS.gene058139 | MS.gene76643 | 0.838677 | 2.49E-57 | -1.69E-46 |
| MS.gene058142 | MS.gene76643 | 0.904687 | 9.46E-80 | -1.69E-46 |
| MS.gene058276 | MS.gene76643 | 0.863474 | 2.43E-64 | -1.69E-46 |
| MS.gene058435 | MS.gene76643 | 0.80541 | 1.35E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene76643 | 0.830001 | 3.75E-55 | -1.69E-46 |
| MS.gene058749 | MS.gene76643 | 0.847994 | 8.13E-60 | -1.69E-46 |
| MS.gene058833 | MS.gene76643 | 0.843791 | 1.13E-58 | -1.69E-46 |
| MS.gene058845 | MS.gene76643 | 0.800188 | 1.62E-48 | -1.69E-46 |
| MS.gene05907 | MS.gene76643 | 0.802348 | 5.85E-49 | -1.69E-46 |
| MS.gene059247 | MS.gene76643 | 0.915275 | 7.14E-85 | -1.69E-46 |
| MS.gene059285 | MS.gene76643 | 0.829745 | 4.33E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene76643 | 0.801346 | 9.40E-49 | -1.69E-46 |
| MS.gene059710 | MS.gene76643 | 0.821883 | 3.19E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene76643 | 0.846147 | 2.61E-59 | -1.69E-46 |
| MS.gene059894 | MS.gene76643 | 0.838084 | 3.55E-57 | -1.69E-46 |
| MS.gene059899 | MS.gene76643 | 0.825301 | 5.05E-54 | -1.69E-46 |
| MS.gene060083 | MS.gene76643 | 0.816279 | 6.00E-52 | -1.69E-46 |
| MS.gene060297 | MS.gene76643 | 0.803392 | 3.56E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene76643 | 0.836583 | 8.60E-57 | -1.69E-46 |
| MS.gene060683 | MS.gene76643 | 0.801211 | 1.00E-48 | -1.69E-46 |
| MS.gene061040 | MS.gene76643 | -0.829862 | 4.06E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene76643 | 0.8377 | 4.45E-57 | -1.69E-46 |
| MS.gene061114 | MS.gene76643 | -0.86055 | 1.91E-63 | -1.69E-46 |
| MS.gene061159 | MS.gene76643 | 0.811721 | 6.08E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76643.t1 | MTR_4g026450 | 97.195 | 713 | 20 | 0 | 1 | 713 | 1 | 713 | 0.0 | 1412 |
| MS.gene76643.t1 | MTR_0053s0030 | 77.542 | 708 | 150 | 3 | 7 | 713 | 2 | 701 | 0.0 | 1093 |
| MS.gene76643.t1 | MTR_6g038750 | 41.455 | 550 | 293 | 8 | 101 | 638 | 78 | 610 | 7.09e-140 | 427 |
| MS.gene76643.t1 | MTR_1g046620 | 42.672 | 464 | 257 | 5 | 100 | 560 | 132 | 589 | 5.90e-130 | 404 |
| MS.gene76643.t1 | MTR_1g009860 | 40.000 | 485 | 284 | 4 | 101 | 581 | 77 | 558 | 1.62e-126 | 389 |
| MS.gene76643.t1 | MTR_1g009860 | 36.678 | 578 | 337 | 10 | 101 | 672 | 77 | 631 | 4.56e-126 | 389 |
| MS.gene76643.t1 | MTR_3g105760 | 37.328 | 509 | 272 | 7 | 167 | 641 | 136 | 631 | 6.90e-114 | 359 |
| MS.gene76643.t1 | MTR_1g095480 | 35.516 | 504 | 290 | 10 | 101 | 578 | 139 | 633 | 8.26e-88 | 293 |
| MS.gene76643.t1 | MTR_1g095480 | 35.593 | 472 | 276 | 8 | 100 | 546 | 138 | 606 | 1.59e-86 | 285 |
| MS.gene76643.t1 | MTR_3g094740 | 33.630 | 449 | 254 | 9 | 143 | 555 | 191 | 631 | 1.56e-72 | 250 |
| MS.gene76643.t1 | MTR_3g094740 | 33.630 | 449 | 254 | 9 | 143 | 555 | 191 | 631 | 2.60e-72 | 249 |
| MS.gene76643.t1 | MTR_8g091710 | 32.000 | 475 | 271 | 10 | 121 | 555 | 160 | 622 | 2.74e-71 | 246 |
| MS.gene76643.t1 | MTR_3g082750 | 34.615 | 390 | 242 | 5 | 148 | 530 | 197 | 580 | 2.71e-68 | 238 |
| MS.gene76643.t1 | MTR_0224s0030 | 35.021 | 237 | 142 | 4 | 348 | 578 | 19 | 249 | 5.40e-42 | 155 |
| MS.gene76643.t1 | MTR_5g068050 | 25.381 | 394 | 261 | 5 | 155 | 518 | 128 | 518 | 7.30e-37 | 145 |
| MS.gene76643.t1 | MTR_5g077080 | 34.241 | 257 | 153 | 6 | 166 | 414 | 98 | 346 | 5.37e-35 | 140 |
| MS.gene76643.t1 | MTR_1g008980 | 31.930 | 285 | 166 | 6 | 166 | 432 | 65 | 339 | 5.42e-35 | 142 |
| MS.gene76643.t1 | MTR_4g104070 | 26.263 | 396 | 263 | 10 | 136 | 515 | 59 | 441 | 9.38e-34 | 135 |
| MS.gene76643.t1 | MTR_8g464860 | 25.917 | 409 | 263 | 7 | 142 | 520 | 199 | 597 | 1.73e-28 | 121 |
| MS.gene76643.t1 | MTR_3g070410 | 27.778 | 288 | 187 | 6 | 139 | 408 | 74 | 358 | 4.37e-27 | 117 |
| MS.gene76643.t1 | MTR_0092s0090 | 61.739 | 115 | 9 | 1 | 201 | 315 | 214 | 293 | 5.06e-23 | 101 |
| MS.gene76643.t1 | MTR_0092s0090 | 92.683 | 41 | 3 | 0 | 390 | 430 | 302 | 342 | 5.97e-17 | 83.2 |
| MS.gene76643.t1 | MTR_2g011640 | 27.090 | 299 | 185 | 6 | 161 | 434 | 275 | 565 | 8.21e-22 | 100 |
| MS.gene76643.t1 | MTR_4g091510 | 24.190 | 401 | 263 | 9 | 150 | 518 | 208 | 599 | 8.80e-22 | 100 |
| MS.gene76643.t1 | MTR_4g091510 | 24.190 | 401 | 263 | 9 | 150 | 518 | 213 | 604 | 1.01e-21 | 100 |
| MS.gene76643.t1 | MTR_1g085610 | 28.767 | 292 | 175 | 9 | 167 | 443 | 242 | 515 | 9.43e-21 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76643.t1 | AT1G79600 | 71.751 | 708 | 191 | 1 | 15 | 713 | 1 | 708 | 0.0 | 1038 |
| MS.gene76643.t1 | AT1G71810 | 42.857 | 511 | 272 | 5 | 110 | 610 | 78 | 578 | 2.88e-139 | 425 |
| MS.gene76643.t1 | AT3G24190 | 43.534 | 464 | 253 | 6 | 100 | 560 | 140 | 597 | 2.80e-131 | 407 |
| MS.gene76643.t1 | AT4G31390 | 40.619 | 485 | 281 | 3 | 101 | 581 | 113 | 594 | 1.11e-126 | 392 |
| MS.gene76643.t1 | AT5G24970 | 38.727 | 550 | 280 | 9 | 101 | 605 | 93 | 630 | 4.09e-121 | 379 |
| MS.gene76643.t1 | AT5G24970 | 38.727 | 550 | 280 | 9 | 101 | 605 | 132 | 669 | 1.76e-120 | 378 |
| MS.gene76643.t1 | AT4G31390 | 39.381 | 485 | 262 | 4 | 101 | 581 | 113 | 569 | 1.67e-117 | 367 |
| MS.gene76643.t1 | AT5G24970 | 38.182 | 550 | 280 | 10 | 101 | 605 | 93 | 627 | 1.01e-116 | 367 |
| MS.gene76643.t1 | AT4G31390 | 41.960 | 398 | 227 | 2 | 185 | 581 | 1 | 395 | 5.76e-110 | 342 |
| MS.gene76643.t1 | AT2G39190 | 33.211 | 545 | 304 | 12 | 100 | 595 | 145 | 678 | 7.41e-85 | 285 |
| MS.gene76643.t1 | AT3G07700 | 34.336 | 399 | 255 | 4 | 137 | 530 | 171 | 567 | 2.02e-70 | 243 |
| MS.gene76643.t1 | AT3G07700 | 34.336 | 399 | 255 | 4 | 137 | 530 | 171 | 567 | 2.02e-70 | 243 |
| MS.gene76643.t1 | AT3G07700 | 34.336 | 399 | 255 | 4 | 137 | 530 | 171 | 567 | 2.02e-70 | 243 |
| MS.gene76643.t1 | AT5G64940 | 33.260 | 454 | 257 | 9 | 140 | 555 | 203 | 648 | 2.68e-69 | 242 |
| MS.gene76643.t1 | AT5G64940 | 33.260 | 454 | 257 | 9 | 140 | 555 | 203 | 648 | 2.68e-69 | 242 |
| MS.gene76643.t1 | AT3G07700 | 32.867 | 429 | 250 | 6 | 137 | 530 | 171 | 596 | 9.72e-68 | 237 |
| MS.gene76643.t1 | AT5G05200 | 26.010 | 396 | 256 | 5 | 155 | 518 | 129 | 519 | 2.49e-39 | 153 |
| MS.gene76643.t1 | AT4G24810 | 27.848 | 316 | 201 | 7 | 136 | 436 | 13 | 316 | 5.41e-37 | 141 |
| MS.gene76643.t1 | AT4G24810 | 29.054 | 296 | 183 | 7 | 136 | 416 | 13 | 296 | 1.07e-36 | 140 |
| MS.gene76643.t1 | AT4G24810 | 24.709 | 429 | 266 | 10 | 136 | 531 | 13 | 417 | 2.61e-36 | 142 |
| MS.gene76643.t1 | AT4G24810 | 24.709 | 429 | 266 | 10 | 136 | 531 | 13 | 417 | 2.61e-36 | 142 |
| MS.gene76643.t1 | AT4G24810 | 24.709 | 429 | 266 | 10 | 136 | 531 | 56 | 460 | 5.42e-36 | 142 |
| MS.gene76643.t1 | AT4G24810 | 24.541 | 436 | 265 | 11 | 136 | 531 | 13 | 424 | 3.35e-34 | 136 |
| MS.gene76643.t1 | AT5G24810 | 32.667 | 300 | 167 | 9 | 136 | 417 | 89 | 371 | 3.57e-34 | 140 |
| MS.gene76643.t1 | AT2G39190 | 37.788 | 217 | 129 | 4 | 100 | 313 | 145 | 358 | 1.52e-33 | 133 |
| MS.gene76643.t1 | AT1G65950 | 32.411 | 253 | 163 | 4 | 166 | 414 | 113 | 361 | 3.76e-33 | 134 |
| MS.gene76643.t1 | AT5G50330 | 28.840 | 319 | 200 | 9 | 136 | 439 | 56 | 362 | 9.29e-33 | 132 |
| MS.gene76643.t1 | AT1G65950 | 32.411 | 253 | 163 | 4 | 166 | 414 | 113 | 361 | 1.51e-32 | 133 |
| MS.gene76643.t1 | AT5G24810 | 29.909 | 331 | 166 | 10 | 136 | 417 | 89 | 402 | 2.35e-29 | 125 |
| MS.gene76643.t1 | AT2G40090 | 29.373 | 303 | 189 | 9 | 152 | 434 | 89 | 386 | 3.37e-28 | 120 |
| MS.gene76643.t1 | AT5G50330 | 26.959 | 319 | 190 | 10 | 136 | 439 | 56 | 346 | 1.18e-26 | 114 |
| MS.gene76643.t1 | AT1G11390 | 24.421 | 475 | 306 | 12 | 78 | 518 | 143 | 598 | 1.69e-24 | 109 |
| MS.gene76643.t1 | AT1G61640 | 24.121 | 398 | 253 | 9 | 155 | 518 | 213 | 595 | 8.34e-24 | 107 |
| MS.gene76643.t1 | AT1G61640 | 26.774 | 310 | 186 | 7 | 155 | 434 | 213 | 511 | 1.90e-23 | 105 |
| MS.gene76643.t1 | AT4G01660 | 27.835 | 291 | 183 | 9 | 167 | 445 | 240 | 515 | 3.33e-19 | 92.4 |
| MS.gene76643.t1 | AT1G61640 | 27.317 | 205 | 126 | 4 | 155 | 344 | 213 | 409 | 7.87e-15 | 78.2 |
Find 132 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCAGATTGTGTTTAATT+TGG | 0.146085 | 4.1:+72536838 | MS.gene76643:CDS |
| TTGTATCAATATCCATTTAA+TGG | 0.197786 | 4.1:+72539634 | MS.gene76643:CDS |
| CAACTTGTTGCTTCAAGATA+TGG | 0.207079 | 4.1:+72536146 | MS.gene76643:CDS |
| GAAGCGAGATTTGCAATAAT+TGG | 0.217043 | 4.1:+72539421 | MS.gene76643:CDS |
| TGCAGCAAGCACCTTAAAAT+TGG | 0.225494 | 4.1:-72540036 | None:intergenic |
| TTCTACCTCATTAGAGGTTT+AGG | 0.250334 | 4.1:+72538347 | MS.gene76643:CDS |
| GAATGCATTGAGAGGGAATT+AGG | 0.251683 | 4.1:+72538170 | MS.gene76643:CDS |
| ATTGCAAATCTCGCTTCTTC+TGG | 0.262758 | 4.1:-72539415 | None:intergenic |
| GTGTTTAATTTGGGTTCATT+TGG | 0.267830 | 4.1:+72536848 | MS.gene76643:CDS |
| TTTCAGATTGTGTTTAATTT+GGG | 0.276250 | 4.1:+72536839 | MS.gene76643:CDS |
| TCTACCTCATTAGAGGTTTA+GGG | 0.280854 | 4.1:+72538348 | MS.gene76643:CDS |
| CTCAACAACCCATTTCTTCA+TGG | 0.283594 | 4.1:+72535868 | MS.gene76643:CDS |
| CATACTATGCGTTGATATTA+AGG | 0.284829 | 4.1:+72539973 | MS.gene76643:CDS |
| ATGCTCTTGATTTCTTATCT+AGG | 0.293725 | 4.1:+72539497 | MS.gene76643:CDS |
| AACATTATCTCACCATTAAA+TGG | 0.304241 | 4.1:-72539646 | None:intergenic |
| CCCATTTCTTCATGGATTCA+TGG | 0.313372 | 4.1:+72535876 | MS.gene76643:CDS |
| CGCTTTCTTATGCAATTACT+TGG | 0.319801 | 4.1:+72541730 | MS.gene76643:CDS |
| TCCTCATCCTGGTAATCTTT+TGG | 0.321004 | 4.1:+72539339 | MS.gene76643:CDS |
| CAACCTGAGGCCCGTAAACT+TGG | 0.330945 | 4.1:+72541667 | MS.gene76643:CDS |
| ATTAAGGTCTCTCACTGTTC+TGG | 0.337948 | 4.1:+72539989 | MS.gene76643:CDS |
| TTGGACTTCTACCTCATTAG+AGG | 0.338286 | 4.1:+72538341 | MS.gene76643:CDS |
| GCTTGAAAACCTTCTAGTTC+AGG | 0.339166 | 4.1:+72540511 | MS.gene76643:CDS |
| CCGATAGCTGCTGCTAGTTT+AGG | 0.342246 | 4.1:+72538233 | MS.gene76643:CDS |
| GAAACTGAACTTTGTGAAGA+TGG | 0.349488 | 4.1:-72535999 | None:intergenic |
| TGTTTAATTTGGGTTCATTT+GGG | 0.356535 | 4.1:+72536849 | MS.gene76643:CDS |
| GAGTTGCTGATCAGAATAAA+AGG | 0.357382 | 4.1:+72536900 | MS.gene76643:CDS |
| ACCATGAATCCATGAAGAAA+TGG | 0.361143 | 4.1:-72535877 | None:intergenic |
| GCCTTAAGGGAACCATCTTT+AGG | 0.365474 | 4.1:-72536035 | None:intergenic |
| TTTCGAAGTGCAGGAACAAT+TGG | 0.368170 | 4.1:-72539535 | None:intergenic |
| GCATCTCTTAGATATGGATT+TGG | 0.372745 | 4.1:-72540095 | None:intergenic |
| TTGAGGAACCTTGTCTTCAA+TGG | 0.379397 | 4.1:+72540707 | MS.gene76643:CDS |
| TACTCAGATGGACAAATATC+AGG | 0.388127 | 4.1:-72537004 | None:intergenic |
| ATCAGAGCATCTCTTAGATA+TGG | 0.388348 | 4.1:-72540101 | None:intergenic |
| ACGAAACTGTGAATTCAATA+AGG | 0.388723 | 4.1:-72535955 | None:intergenic |
| GAGATCAAGTGATTAGGATA+TGG | 0.389231 | 4.1:+72540789 | MS.gene76643:CDS |
| ATATGGTTCTAAACCCTTCA+AGG | 0.397792 | 4.1:+72536163 | MS.gene76643:CDS |
| TGGAAGAGCAAGAGCCTTAA+GGG | 0.400804 | 4.1:-72536048 | None:intergenic |
| CATTCAAAGGCGTCCTCGTC+AGG | 0.401484 | 4.1:-72538152 | None:intergenic |
| TTCACAGTTTCGTGCTGCTT+TGG | 0.406279 | 4.1:+72535965 | MS.gene76643:CDS |
| TGCTCTTGATTTCTTATCTA+GGG | 0.422756 | 4.1:+72539498 | MS.gene76643:CDS |
| TGATGAGGTGAGATTTGAAA+TGG | 0.427609 | 4.1:-72535907 | None:intergenic |
| TGACCCAATTTGACAAAAGT+TGG | 0.428903 | 4.1:-72536965 | None:intergenic |
| AGCTGCTGCTAGTTTAGGTC+AGG | 0.429613 | 4.1:+72538238 | MS.gene76643:CDS |
| TCAGTTTCTGACATCATAAG+TGG | 0.430403 | 4.1:-72540743 | None:intergenic |
| AGAAATATATTCACTAAGCT+TGG | 0.434347 | 4.1:+72536941 | MS.gene76643:CDS |
| TTGGAAGAGCAAGAGCCTTA+AGG | 0.437714 | 4.1:-72536049 | None:intergenic |
| CTTGAAAACCTTCTAGTTCA+GGG | 0.442279 | 4.1:+72540512 | MS.gene76643:CDS |
| AGGAACATACCGGTATGTTT+CGG | 0.445651 | 4.1:-72540678 | None:intergenic |
| TACCTTCAGGACAGGTTGTA+AGG | 0.451984 | 4.1:-72540567 | None:intergenic |
| AAGACGATTGTGGATGGTCT+CGG | 0.457692 | 4.1:+72539604 | MS.gene76643:CDS |
| GAGGCAAGGGCTTAACGTCT+TGG | 0.458687 | 4.1:+72539249 | MS.gene76643:CDS |
| AACCTGAGGCCCGTAAACTT+GGG | 0.465701 | 4.1:+72541668 | MS.gene76643:CDS |
| ACCTAAAGATGGTTCCCTTA+AGG | 0.466778 | 4.1:+72536034 | MS.gene76643:CDS |
| AGAAATGGGTTGTTGAGATA+TGG | 0.468867 | 4.1:-72535862 | None:intergenic |
| GCGGTCAAGGTCCAACGCCC+TGG | 0.472478 | 4.1:+72538299 | MS.gene76643:CDS |
| TTATCAACACAACCTAAAGA+TGG | 0.475216 | 4.1:+72536023 | MS.gene76643:CDS |
| AGCTCAGAGATCAAGTGATT+AGG | 0.475418 | 4.1:+72540783 | MS.gene76643:CDS |
| GAAATATCACAAAACCTTGA+AGG | 0.478269 | 4.1:-72536177 | None:intergenic |
| GCAGCAAGCACCTTAAAATT+GGG | 0.485400 | 4.1:-72540035 | None:intergenic |
| TAAGGCTCTTGCTCTTCCAA+TGG | 0.486488 | 4.1:+72536052 | MS.gene76643:CDS |
| CCTATAGCTTCTTCAATGCC+AGG | 0.489261 | 4.1:-72538317 | None:intergenic |
| TCAAGAGCTTAATTATGTGC+AGG | 0.492075 | 4.1:+72538448 | MS.gene76643:CDS |
| GGGCAAAGTTGTTGCGGTCA+AGG | 0.500027 | 4.1:+72538286 | MS.gene76643:CDS |
| TTCCTCAGAACTTCACCATC+AGG | 0.502663 | 4.1:-72540599 | None:intergenic |
| AAAGCTCGGTTGAAGCGGTC+GGG | 0.505739 | 4.1:+72538266 | MS.gene76643:CDS |
| CCTGGCATTGAAGAAGCTAT+AGG | 0.507063 | 4.1:+72538317 | MS.gene76643:CDS |
| CTTCTTCAATGCCAGGGCGT+TGG | 0.511436 | 4.1:-72538310 | None:intergenic |
| TGTTGTGTAGGTTGCGGGAA+GGG | 0.512424 | 4.1:+72536814 | MS.gene76643:intron |
| AATATCAACGCATAGTATGC+TGG | 0.512574 | 4.1:-72539969 | None:intergenic |
| GATGAGGTGAGATTTGAAAT+GGG | 0.516502 | 4.1:-72535906 | None:intergenic |
| CCATGAATCCATGAAGAAAT+GGG | 0.516659 | 4.1:-72535876 | None:intergenic |
| TAGGTCAGGTTTATAAAGCT+CGG | 0.519929 | 4.1:+72538252 | MS.gene76643:CDS |
| TGTTGAGATATGGTGGAAGA+AGG | 0.522138 | 4.1:-72535852 | None:intergenic |
| CTCAGACAACTGCTCGAGTA+CGG | 0.524488 | 4.1:+72539301 | MS.gene76643:CDS |
| TAAAGCTCGGTTGAAGCGGT+CGG | 0.526705 | 4.1:+72538265 | MS.gene76643:CDS |
| TGGGTCAAGGGCTGTCTACT+AGG | 0.529031 | 4.1:+72536981 | MS.gene76643:CDS |
| TAGAGATTTCTCTGCTAAAG+AGG | 0.529315 | 4.1:+72540544 | MS.gene76643:CDS |
| CGAAGGTACTAACGATCGAT+TGG | 0.532033 | 4.1:+72539188 | MS.gene76643:CDS |
| TTGTTGTGTAGGTTGCGGGA+AGG | 0.536381 | 4.1:+72536813 | MS.gene76643:intron |
| CAGGACTCAACAATACCTTC+AGG | 0.537914 | 4.1:-72540580 | None:intergenic |
| TTCCATGCAGATCCTCATCC+TGG | 0.539915 | 4.1:+72539328 | MS.gene76643:CDS |
| CTAGCAGCAGCTATCGGCGA+TGG | 0.540209 | 4.1:-72538227 | None:intergenic |
| CGCCTTTGAATGCATTGAGA+GGG | 0.540213 | 4.1:+72538163 | MS.gene76643:CDS |
| GCACAATTTCCGAAACATAC+CGG | 0.540600 | 4.1:+72540669 | MS.gene76643:CDS |
| CCTAAACTAGCAGCAGCTAT+CGG | 0.540644 | 4.1:-72538233 | None:intergenic |
| TTTATAAAGCTCGGTTGAAG+CGG | 0.541624 | 4.1:+72538261 | MS.gene76643:CDS |
| CATTGAAGAAGCTATAGGAT+TGG | 0.543334 | 4.1:+72538322 | MS.gene76643:CDS |
| GGCCTTACAACCTGTCCTGA+AGG | 0.543439 | 4.1:+72540565 | MS.gene76643:CDS |
| GAGCCATAGCTTCGTAGTCT+CGG | 0.545454 | 4.1:-72539465 | None:intergenic |
| ACCTGAGGCCCGTAAACTTG+GGG | 0.549273 | 4.1:+72541669 | MS.gene76643:CDS |
| GTTTCTAATAAATAAATATG+TGG | 0.549328 | 4.1:+72538370 | MS.gene76643:CDS |
| CTCAACAATACCTTCAGGAC+AGG | 0.549422 | 4.1:-72540575 | None:intergenic |
| GCTTAACTTCAAGACGATTG+TGG | 0.550639 | 4.1:+72539594 | MS.gene76643:CDS |
| TTGCATTGCCATTGAAGACA+AGG | 0.554912 | 4.1:-72540715 | None:intergenic |
| ATATCATCAACACGATCCAT+TGG | 0.557219 | 4.1:-72536068 | None:intergenic |
| AGGTCTCTCACTGTTCTGGA+AGG | 0.557957 | 4.1:+72539993 | MS.gene76643:CDS |
| AAATATCACAAAACCTTGAA+GGG | 0.558354 | 4.1:-72536176 | None:intergenic |
| GCCAAAAGATTACCAGGATG+AGG | 0.558707 | 4.1:-72539340 | None:intergenic |
| CTAACGATCGATTGGATCGA+AGG | 0.561997 | 4.1:+72539196 | MS.gene76643:CDS |
| TTCCCTCTCAATGCATTCAA+AGG | 0.562534 | 4.1:-72538165 | None:intergenic |
| AACTTCAAGACGATTGTGGA+TGG | 0.568832 | 4.1:+72539598 | MS.gene76643:CDS |
| TCATGCTGAAGCAAAAGCAT+TGG | 0.569812 | 4.1:+72536091 | MS.gene76643:CDS |
| CAAGAAGCAATTGAGAGGCA+AGG | 0.576159 | 4.1:+72539235 | MS.gene76643:CDS |
| TAACCGAGACTACGAAGCTA+TGG | 0.578460 | 4.1:+72539462 | MS.gene76643:CDS |
| AAGAAGCAATTGAGAGGCAA+GGG | 0.580778 | 4.1:+72539236 | MS.gene76643:CDS |
| GCGTCCTCGTCAGGAAATGT+TGG | 0.582997 | 4.1:-72538143 | None:intergenic |
| AATGGGTTGTTGAGATATGG+TGG | 0.584838 | 4.1:-72535859 | None:intergenic |
| GAAACCCTAAACCTCTAATG+AGG | 0.585397 | 4.1:-72538352 | None:intergenic |
| GGTGTTGCCAAAAGATTACC+AGG | 0.588144 | 4.1:-72539346 | None:intergenic |
| TTGTCCATCTGAGTATCTTG+AGG | 0.589362 | 4.1:+72537012 | MS.gene76643:CDS |
| TATCTTGAAGCAACAAGTTG+AGG | 0.593723 | 4.1:-72536143 | None:intergenic |
| ACGCCTTTGAATGCATTGAG+AGG | 0.599528 | 4.1:+72538162 | MS.gene76643:CDS |
| TTATGATGTCAGAAACTGAA+AGG | 0.603481 | 4.1:+72540747 | MS.gene76643:CDS |
| CTATAGCTTCTTCAATGCCA+GGG | 0.605574 | 4.1:-72538316 | None:intergenic |
| CCTGAGGCCCGTAAACTTGG+GGG | 0.608957 | 4.1:+72541670 | MS.gene76643:CDS |
| AGCTCCTCAAGATACTCAGA+TGG | 0.610256 | 4.1:-72537016 | None:intergenic |
| TGCAGGAGGGACAAAATGCA+AGG | 0.613387 | 4.1:+72539095 | MS.gene76643:intron |
| TATCGGCGATGGAGATATTG+TGG | 0.615296 | 4.1:-72538216 | None:intergenic |
| AAGGTATTGTTGAGTCCTGA+TGG | 0.620888 | 4.1:+72540584 | MS.gene76643:CDS |
| TGTCTTCAATGGCAATGCAA+AGG | 0.625326 | 4.1:+72540718 | MS.gene76643:CDS |
| AGTATCGGTAGCAAAAGAGA+TGG | 0.625690 | 4.1:-72540842 | None:intergenic |
| TTGAAAACCTTCTAGTTCAG+GGG | 0.625717 | 4.1:+72540513 | MS.gene76643:CDS |
| TACCAGGATGAGGATCTGCA+TGG | 0.634417 | 4.1:-72539330 | None:intergenic |
| ATGATCAAGAAGCAATTGAG+AGG | 0.643370 | 4.1:+72539230 | MS.gene76643:CDS |
| TTTGCCAACATTTCCTGACG+AGG | 0.644621 | 4.1:+72538139 | MS.gene76643:CDS |
| CTGAGGCCCGTAAACTTGGG+GGG | 0.652407 | 4.1:+72541671 | MS.gene76643:CDS |
| TTGGGACTATACAAGTGCGA+AGG | 0.655685 | 4.1:+72539171 | MS.gene76643:CDS |
| TGATTTGAAAGAGATTGATG+AGG | 0.663476 | 4.1:-72535922 | None:intergenic |
| GTCCTGATGGTGAAGTTCTG+AGG | 0.671724 | 4.1:+72540597 | MS.gene76643:CDS |
| GCGGTCGGGCAAAGTTGTTG+CGG | 0.688582 | 4.1:+72538280 | MS.gene76643:CDS |
| ACAGGTGCTTCAGCAACCTG+AGG | 0.706045 | 4.1:+72541654 | MS.gene76643:intron |
| GTCTTGGATCTAGTAAACAG+CGG | 0.723373 | 4.1:+72539265 | MS.gene76643:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAAATAATAAATTGTTA+AGG | + | chr4.1:72540363-72540382 | MS.gene76643:intron | 10.0% |
| !!! | ATTATATTAGATTTTTCTTT+TGG | + | chr4.1:72539044-72539063 | MS.gene76643:intron | 10.0% |
| !!! | TGAAATATATTTTTTTTGAA+TGG | + | chr4.1:72541575-72541594 | MS.gene76643:intron | 10.0% |
| !!! | TTATATTAGATTTTTCTTTT+GGG | + | chr4.1:72539045-72539064 | MS.gene76643:intron | 10.0% |
| !! | ACAAAATATATTCACAAAAA+AGG | - | chr4.1:72536271-72536290 | None:intergenic | 15.0% |
| !! | CAAAATATATTCACAAAAAA+GGG | - | chr4.1:72536270-72536289 | None:intergenic | 15.0% |
| !! | GTTTCTAATAAATAAATATG+TGG | + | chr4.1:72538370-72538389 | MS.gene76643:CDS | 15.0% |
| !! | TAAATTGTTAAGGATATTAT+AGG | + | chr4.1:72540373-72540392 | MS.gene76643:intron | 15.0% |
| !! | TTTAAAAATGACAAATAAGT+AGG | - | chr4.1:72540269-72540288 | None:intergenic | 15.0% |
| !!! | AGTAATAAATTGCTATATTT+TGG | - | chr4.1:72541117-72541136 | None:intergenic | 15.0% |
| !!! | TATATTAGATTTTTCTTTTG+GGG | + | chr4.1:72539046-72539065 | MS.gene76643:intron | 15.0% |
| !!! | TCAAAAATTATTTTACATGT+TGG | + | chr4.1:72540996-72541015 | MS.gene76643:intron | 15.0% |
| !!! | TTTTTGTGAATATATTTTGT+GGG | + | chr4.1:72536271-72536290 | MS.gene76643:intron | 15.0% |
| !!! | TTTTTGTGATTATTTTTTGT+GGG | + | chr4.1:72536216-72536235 | MS.gene76643:intron | 15.0% |
| !!! | TTTTTTGTGAATATATTTTG+TGG | + | chr4.1:72536270-72536289 | MS.gene76643:intron | 15.0% |
| !! | AAACAACAAATAAAAAGGAA+TGG | + | chr4.1:72540430-72540449 | MS.gene76643:intron | 20.0% |
| !! | AAGGTTTAAATGTTAATTGA+GGG | - | chr4.1:72541144-72541163 | None:intergenic | 20.0% |
| !! | AATACTGATCACTATTTATA+GGG | + | chr4.1:72538545-72538564 | MS.gene76643:intron | 20.0% |
| !! | AATGTAAAGTGATTTATGTT+TGG | - | chr4.1:72537332-72537351 | None:intergenic | 20.0% |
| !! | ACAAAAGATAATCACAAAAA+AGG | - | chr4.1:72536749-72536768 | None:intergenic | 20.0% |
| !! | ATCATTGACAAAAATTTCAA+TGG | - | chr4.1:72538058-72538077 | None:intergenic | 20.0% |
| !! | ATTATATTCAATTACAGTGT+TGG | - | chr4.1:72536369-72536388 | None:intergenic | 20.0% |
| !! | ATTTCAGATTGTGTTTAATT+TGG | + | chr4.1:72536838-72536857 | MS.gene76643:CDS | 20.0% |
| !! | CAAAAGATAATCACAAAAAA+GGG | - | chr4.1:72536748-72536767 | None:intergenic | 20.0% |
| !! | CCTTAAAACAACAAATAAAA+AGG | + | chr4.1:72540425-72540444 | MS.gene76643:intron | 20.0% |
| !! | CTCTAATACAAAAAGAAAAT+TGG | - | chr4.1:72539697-72539716 | None:intergenic | 20.0% |
| !! | GATGAAAACAAACATAATAA+AGG | - | chr4.1:72538015-72538034 | None:intergenic | 20.0% |
| !! | TCACAAAAAGATTAAAACTT+TGG | - | chr4.1:72536205-72536224 | None:intergenic | 20.0% |
| !! | TCATTATCAAATACAGATTT+CGG | - | chr4.1:72538497-72538516 | None:intergenic | 20.0% |
| !! | TTGTATCAATATCCATTTAA+TGG | + | chr4.1:72539634-72539653 | MS.gene76643:CDS | 20.0% |
| !!! | AAACAATGATGGATTTAAAA+AGG | - | chr4.1:72540172-72540191 | None:intergenic | 20.0% |
| !!! | AAATTTATATCGATTTAGTG+CGG | + | chr4.1:72537570-72537589 | MS.gene76643:intron | 20.0% |
| !!! | AATAAATTGCTATATTTTGG+TGG | - | chr4.1:72541114-72541133 | None:intergenic | 20.0% |
| !!! | ACTATTTGACTATTTCATTT+TGG | + | chr4.1:72537492-72537511 | MS.gene76643:intron | 20.0% |
| !!! | CCTTTTTATTTGTTGTTTTA+AGG | - | chr4.1:72540428-72540447 | None:intergenic | 20.0% |
| !!! | CTATTTGACTATTTCATTTT+GGG | + | chr4.1:72537493-72537512 | MS.gene76643:intron | 20.0% |
| !!! | CTTTTTGTGATTATTTTTTG+TGG | + | chr4.1:72536215-72536234 | MS.gene76643:intron | 20.0% |
| !!! | GTTTTATTCATTAACATACA+AGG | - | chr4.1:72539011-72539030 | None:intergenic | 20.0% |
| !!! | TGTGTAATTTTTTGATGTAT+TGG | + | chr4.1:72541330-72541349 | MS.gene76643:intron | 20.0% |
| !!! | TTAATTCTATGTTCTTTTGA+TGG | + | chr4.1:72541070-72541089 | MS.gene76643:intron | 20.0% |
| !!! | TTTCAGATTGTGTTTAATTT+GGG | + | chr4.1:72536839-72536858 | MS.gene76643:CDS | 20.0% |
| !!! | TTTTGAGTTAAACATTTAAG+TGG | - | chr4.1:72540982-72541001 | None:intergenic | 20.0% |
| !!! | TTTTTGTGAATATCTTTTGT+GGG | + | chr4.1:72536691-72536710 | MS.gene76643:intron | 20.0% |
| !!! | TTTTTGTGATTATCTTTTGT+GGG | + | chr4.1:72536749-72536768 | MS.gene76643:intron | 20.0% |
| !!! | TTTTTTGTGATTATCTTTTG+TGG | + | chr4.1:72536748-72536767 | MS.gene76643:intron | 20.0% |
| ! | AAATACACTCATTATATGCT+TGG | - | chr4.1:72538947-72538966 | None:intergenic | 25.0% |
| ! | AAATATCACAAAACCTTGAA+GGG | - | chr4.1:72536179-72536198 | None:intergenic | 25.0% |
| ! | AACATTATCTCACCATTAAA+TGG | - | chr4.1:72539649-72539668 | None:intergenic | 25.0% |
| ! | AGAAATATATTCACTAAGCT+TGG | + | chr4.1:72536941-72536960 | MS.gene76643:CDS | 25.0% |
| ! | AGACTCAATCCTTAATAAAT+AGG | + | chr4.1:72538574-72538593 | MS.gene76643:intron | 25.0% |
| ! | CAAAAAATTACACATTGTCT+GGG | - | chr4.1:72541324-72541343 | None:intergenic | 25.0% |
| ! | CAAATGAAAAGAAAACCAAA+AGG | - | chr4.1:72537069-72537088 | None:intergenic | 25.0% |
| ! | CAATACTGATCACTATTTAT+AGG | + | chr4.1:72538544-72538563 | MS.gene76643:intron | 25.0% |
| ! | CACAGAGTAATTTAAAAACA+TGG | + | chr4.1:72537946-72537965 | MS.gene76643:intron | 25.0% |
| ! | GAAGGTTTAAATGTTAATTG+AGG | - | chr4.1:72541145-72541164 | None:intergenic | 25.0% |
| ! | GACTCAATCCTTAATAAATA+GGG | + | chr4.1:72538575-72538594 | MS.gene76643:intron | 25.0% |
| ! | GATATTATGCTAGAATATCT+TGG | - | chr4.1:72538697-72538716 | None:intergenic | 25.0% |
| ! | TAAGATTGAAAACTGATCTT+AGG | + | chr4.1:72538664-72538683 | MS.gene76643:intron | 25.0% |
| ! | TACAAAAACAACGGATAAAA+TGG | - | chr4.1:72540233-72540252 | None:intergenic | 25.0% |
| ! | TCAAAAAATTACACATTGTC+TGG | - | chr4.1:72541325-72541344 | None:intergenic | 25.0% |
| ! | TCTAACTTGAACTTAGAATT+TGG | + | chr4.1:72537257-72537276 | MS.gene76643:intron | 25.0% |
| ! | TCTAGAGATTGATTAATGTT+TGG | + | chr4.1:72537134-72537153 | MS.gene76643:intron | 25.0% |
| ! | TGATAGTAGTTTGATACAAA+AGG | + | chr4.1:72538519-72538538 | MS.gene76643:intron | 25.0% |
| ! | TTGAATATAATCACATGTGT+TGG | + | chr4.1:72536378-72536397 | MS.gene76643:intron | 25.0% |
| !! | ATAATTGATTCTGACATGTT+TGG | + | chr4.1:72537196-72537215 | MS.gene76643:intron | 25.0% |
| !! | CAGATTTTCTACAAAAACAA+CGG | - | chr4.1:72540242-72540261 | None:intergenic | 25.0% |
| !! | CTATACATTTTACTGTTTCA+AGG | - | chr4.1:72541452-72541471 | None:intergenic | 25.0% |
| !! | GTTTTTGTGAATATCTTTTG+TGG | + | chr4.1:72536690-72536709 | MS.gene76643:intron | 25.0% |
| !! | TGTAACTTTTGCAAAAATCA+TGG | + | chr4.1:72537721-72537740 | MS.gene76643:intron | 25.0% |
| !! | TTTAGAACATATAGTTGACT+TGG | + | chr4.1:72541524-72541543 | MS.gene76643:intron | 25.0% |
| !! | TTTTTGCAAAAGTTACACTT+TGG | - | chr4.1:72537718-72537737 | None:intergenic | 25.0% |
| !!! | AAACTTGCTTTTCTTGATTT+CGG | + | chr4.1:72539376-72539395 | MS.gene76643:CDS | 25.0% |
| !!! | AGTATTGAATTCTTACCTTT+TGG | + | chr4.1:72537051-72537070 | MS.gene76643:intron | 25.0% |
| !!! | GATTGAATGTTAATTTTGAC+AGG | + | chr4.1:72539068-72539087 | MS.gene76643:intron | 25.0% |
| !!! | TCAATTCTGATCACTTTTAT+AGG | + | chr4.1:72537593-72537612 | MS.gene76643:intron | 25.0% |
| !!! | TGTTTAATTTGGGTTCATTT+GGG | + | chr4.1:72536849-72536868 | MS.gene76643:CDS | 25.0% |
| !!! | TGTTTTAAGGTTATTTACAC+CGG | - | chr4.1:72540415-72540434 | None:intergenic | 25.0% |
| AAACAACGGATAAAATGGAA+AGG | - | chr4.1:72540228-72540247 | None:intergenic | 30.0% | |
| ACGAAACTGTGAATTCAATA+AGG | - | chr4.1:72535958-72535977 | None:intergenic | 30.0% | |
| ATAAATATTGAACCCTGTTC+TGG | + | chr4.1:72538761-72538780 | MS.gene76643:intron | 30.0% | |
| ATGCTCTTGATTTCTTATCT+AGG | + | chr4.1:72539497-72539516 | MS.gene76643:CDS | 30.0% | |
| CAAAAAATTGTATGCTGACA+AGG | + | chr4.1:72539123-72539142 | MS.gene76643:CDS | 30.0% | |
| CAAAGAATCGTATTATACAC+AGG | + | chr4.1:72541636-72541655 | MS.gene76643:intron | 30.0% | |
| CAACAAATAAAAAGGAATGG+AGG | + | chr4.1:72540433-72540452 | MS.gene76643:intron | 30.0% | |
| CAATTGTGTCCTTAGTTAAA+AGG | + | chr4.1:72541245-72541264 | MS.gene76643:intron | 30.0% | |
| CATATCTTAGATGATCTCTT+CGG | - | chr4.1:72538643-72538662 | None:intergenic | 30.0% | |
| CCTGATTTCCCTATTTATTA+AGG | - | chr4.1:72538586-72538605 | None:intergenic | 30.0% | |
| CCTTAATAAATAGGGAAATC+AGG | + | chr4.1:72538583-72538602 | MS.gene76643:intron | 30.0% | |
| CTACACAACAAAACCAAAAA+CGG | - | chr4.1:72536804-72536823 | None:intergenic | 30.0% | |
| GAAATATCACAAAACCTTGA+AGG | - | chr4.1:72536180-72536199 | None:intergenic | 30.0% | |
| GCTTCAAATTTGTGAATGTT+TGG | - | chr4.1:72537782-72537801 | None:intergenic | 30.0% | |
| GGATATGTTCAAGTAAAAGT+AGG | - | chr4.1:72537311-72537330 | None:intergenic | 30.0% | |
| TATCAAATACAGATTTCGGT+CGG | - | chr4.1:72538493-72538512 | None:intergenic | 30.0% | |
| TCAACAAGTTCAAACAATGA+TGG | - | chr4.1:72540183-72540202 | None:intergenic | 30.0% | |
| TGATGTAGTGTTGTCAATTA+TGG | + | chr4.1:72537989-72538008 | MS.gene76643:intron | 30.0% | |
| TGATTTGAAAGAGATTGATG+AGG | - | chr4.1:72535925-72535944 | None:intergenic | 30.0% | |
| TGCTCTTGATTTCTTATCTA+GGG | + | chr4.1:72539498-72539517 | MS.gene76643:CDS | 30.0% | |
| TTATCAACACAACCTAAAGA+TGG | + | chr4.1:72536023-72536042 | MS.gene76643:CDS | 30.0% | |
| TTATGATGTCAGAAACTGAA+AGG | + | chr4.1:72540747-72540766 | MS.gene76643:CDS | 30.0% | |
| TTTGTGAATGTTTGGATTCA+AGG | - | chr4.1:72537774-72537793 | None:intergenic | 30.0% | |
| ! | ACATTCACAAATTTGAAGCA+TGG | + | chr4.1:72537783-72537802 | MS.gene76643:intron | 30.0% |
| ! | AGAAGCCTTTTAGCAAAATA+GGG | - | chr4.1:72540068-72540087 | None:intergenic | 30.0% |
| ! | ATATGCTGATCCCAATTTTA+AGG | + | chr4.1:72540025-72540044 | MS.gene76643:CDS | 30.0% |
| ! | CATACTATGCGTTGATATTA+AGG | + | chr4.1:72539973-72539992 | MS.gene76643:CDS | 30.0% |
| ! | CATATCCCTATTTTGCTAAA+AGG | + | chr4.1:72540060-72540079 | MS.gene76643:CDS | 30.0% |
| ! | CTTTTTCTTACCTGTAGTAT+CGG | - | chr4.1:72540860-72540879 | None:intergenic | 30.0% |
| ! | TAGAAGCCTTTTAGCAAAAT+AGG | - | chr4.1:72540069-72540088 | None:intergenic | 30.0% |
| ! | TAGGTTGAATAGTAAATTCG+AGG | - | chr4.1:72537292-72537311 | None:intergenic | 30.0% |
| ! | TTCAAGTTAGAACCAATTCA+GGG | - | chr4.1:72537248-72537267 | None:intergenic | 30.0% |
| ! | TTTTGCTAAAAGGCTTCTAA+CGG | + | chr4.1:72540070-72540089 | MS.gene76643:CDS | 30.0% |
| !! | AACTTGCTTTTCTTGATTTC+GGG | + | chr4.1:72539377-72539396 | MS.gene76643:CDS | 30.0% |
| !! | ACTATTTCATTTTGGGTGTT+TGG | + | chr4.1:72537500-72537519 | MS.gene76643:intron | 30.0% |
| !! | GTGTTTAATTTGGGTTCATT+TGG | + | chr4.1:72536848-72536867 | MS.gene76643:CDS | 30.0% |
| !! | TTAATGTTTGGTTCCACTTT+TGG | + | chr4.1:72537146-72537165 | MS.gene76643:intron | 30.0% |
| !! | TTACCTTCAATCTGAAGTTT+TGG | + | chr4.1:72540934-72540953 | MS.gene76643:intron | 30.0% |
| !!! | ATGGTTTTAAATTGCGGTTA+CGG | + | chr4.1:72537802-72537821 | MS.gene76643:intron | 30.0% |
| !!! | CTTAGTTCCTGATGTTTTTT+GGG | + | chr4.1:72539153-72539172 | MS.gene76643:CDS | 30.0% |
| !!! | GTGATTATTTTTTGTGGGTT+TGG | + | chr4.1:72536221-72536240 | MS.gene76643:intron | 30.0% |
| !!! | TCTTAGTTCCTGATGTTTTT+TGG | + | chr4.1:72539152-72539171 | MS.gene76643:CDS | 30.0% |
| !!! | TGAAGCATGGTTTTAAATTG+CGG | + | chr4.1:72537796-72537815 | MS.gene76643:intron | 30.0% |
| !!! | TGATTTTTTTCCAATGCAGA+TGG | + | chr4.1:72540483-72540502 | MS.gene76643:intron | 30.0% |
| AACGGATAAAATGGAAAGGA+GGG | - | chr4.1:72540224-72540243 | None:intergenic | 35.0% | |
| AATATCAACGCATAGTATGC+TGG | - | chr4.1:72539972-72539991 | None:intergenic | 35.0% | |
| ACCATGAATCCATGAAGAAA+TGG | - | chr4.1:72535880-72535899 | None:intergenic | 35.0% | |
| AGAGTTTGACCAAATTACAG+TGG | + | chr4.1:72537671-72537690 | MS.gene76643:intron | 35.0% | |
| AGCTGATATGGTCTAAATTG+CGG | + | chr4.1:72537868-72537887 | MS.gene76643:intron | 35.0% | |
| AGGAAAAAGACCAATAACTC+CGG | + | chr4.1:72540393-72540412 | MS.gene76643:intron | 35.0% | |
| ATATCATCAACACGATCCAT+TGG | - | chr4.1:72536071-72536090 | None:intergenic | 35.0% | |
| ATGATCAAGAAGCAATTGAG+AGG | + | chr4.1:72539230-72539249 | MS.gene76643:CDS | 35.0% | |
| ATGCTGTGACCTTTATATTG+CGG | + | chr4.1:72537827-72537846 | MS.gene76643:intron | 35.0% | |
| ATGTTAGTGTTGTATCTGTG+TGG | + | chr4.1:72539802-72539821 | MS.gene76643:intron | 35.0% | |
| CACTAACACAGATATAGACA+CGG | + | chr4.1:72539737-72539756 | MS.gene76643:intron | 35.0% | |
| CATTATAAAGACGCCTCATT+GGG | - | chr4.1:72538808-72538827 | None:intergenic | 35.0% | |
| CATTGAAGAAGCTATAGGAT+TGG | + | chr4.1:72538322-72538341 | MS.gene76643:CDS | 35.0% | |
| CCATGAATCCATGAAGAAAT+GGG | - | chr4.1:72535879-72535898 | None:intergenic | 35.0% | |
| CGCTTTCTTATGCAATTACT+TGG | + | chr4.1:72541730-72541749 | MS.gene76643:CDS | 35.0% | |
| GAAACTGAACTTTGTGAAGA+TGG | - | chr4.1:72536002-72536021 | None:intergenic | 35.0% | |
| GAAGCGAGATTTGCAATAAT+TGG | + | chr4.1:72539421-72539440 | MS.gene76643:CDS | 35.0% | |
| GAGATCAAGTGATTAGGATA+TGG | + | chr4.1:72540789-72540808 | MS.gene76643:CDS | 35.0% | |
| GAGTTGCTGATCAGAATAAA+AGG | + | chr4.1:72536900-72536919 | MS.gene76643:CDS | 35.0% | |
| GCATCTCTTAGATATGGATT+TGG | - | chr4.1:72540098-72540117 | None:intergenic | 35.0% | |
| GTAAAGCACACAAATGATCA+AGG | - | chr4.1:72538105-72538124 | None:intergenic | 35.0% | |
| GTATAGTCCCAAAAAACATC+AGG | - | chr4.1:72539163-72539182 | None:intergenic | 35.0% | |
| GTTATTTACACCGGAGTTAT+TGG | - | chr4.1:72540406-72540425 | None:intergenic | 35.0% | |
| TAACTAAGGACACAATTGTG+AGG | - | chr4.1:72541243-72541262 | None:intergenic | 35.0% | |
| TACTCAGATGGACAAATATC+AGG | - | chr4.1:72537007-72537026 | None:intergenic | 35.0% | |
| TAGAGATTTCTCTGCTAAAG+AGG | + | chr4.1:72540544-72540563 | MS.gene76643:CDS | 35.0% | |
| TAGGTCAGGTTTATAAAGCT+CGG | + | chr4.1:72538252-72538271 | MS.gene76643:CDS | 35.0% | |
| TATCTGTGTTAGTGCTTCAT+CGG | - | chr4.1:72539731-72539750 | None:intergenic | 35.0% | |
| TATCTTGAAGCAACAAGTTG+AGG | - | chr4.1:72536146-72536165 | None:intergenic | 35.0% | |
| TCAAAAAAGTTTCGAAGTGC+AGG | - | chr4.1:72539547-72539566 | None:intergenic | 35.0% | |
| TCAAAAAGTCAGGAACATAC+CGG | - | chr4.1:72540691-72540710 | None:intergenic | 35.0% | |
| TCAAGAGCTTAATTATGTGC+AGG | + | chr4.1:72538448-72538467 | MS.gene76643:CDS | 35.0% | |
| TCAGAATCTGCAAGAAAGTT+AGG | - | chr4.1:72539902-72539921 | None:intergenic | 35.0% | |
| TCAGTTTCTGACATCATAAG+TGG | - | chr4.1:72540746-72540765 | None:intergenic | 35.0% | |
| TCTACCTCATTAGAGGTTTA+GGG | + | chr4.1:72538348-72538367 | MS.gene76643:CDS | 35.0% | |
| TGACCCAATTTGACAAAAGT+TGG | - | chr4.1:72536968-72536987 | None:intergenic | 35.0% | |
| TGATGAGGTGAGATTTGAAA+TGG | - | chr4.1:72535910-72535929 | None:intergenic | 35.0% | |
| TTCTACCTCATTAGAGGTTT+AGG | + | chr4.1:72538347-72538366 | MS.gene76643:CDS | 35.0% | |
| TTGAGGTCAAAACACAACAT+TGG | - | chr4.1:72541169-72541188 | None:intergenic | 35.0% | |
| TTTATAAAGCTCGGTTGAAG+CGG | + | chr4.1:72538261-72538280 | MS.gene76643:CDS | 35.0% | |
| ! | AAATTTGCTTCCTCCAAAAG+TGG | - | chr4.1:72537162-72537181 | None:intergenic | 35.0% |
| ! | ACACCTTCAATCTAAAGTGT+CGG | + | chr4.1:72539828-72539847 | MS.gene76643:intron | 35.0% |
| ! | ACTTTTGTCAAATTGGGTCA+AGG | + | chr4.1:72536968-72536987 | MS.gene76643:CDS | 35.0% |
| ! | ATCAGAGCATCTCTTAGATA+TGG | - | chr4.1:72540104-72540123 | None:intergenic | 35.0% |
| ! | ATCATAGTGCCACTGTAATT+TGG | - | chr4.1:72537683-72537702 | None:intergenic | 35.0% |
| ! | CTTTTGTCAAATTGGGTCAA+GGG | + | chr4.1:72536969-72536988 | MS.gene76643:CDS | 35.0% |
| ! | GATGAGGTGAGATTTGAAAT+GGG | - | chr4.1:72535909-72535928 | None:intergenic | 35.0% |
| ! | GGACCAACTTTTGTCAAATT+GGG | + | chr4.1:72536962-72536981 | MS.gene76643:CDS | 35.0% |
| ! | GTTCAAGTTAGAACCAATTC+AGG | - | chr4.1:72537249-72537268 | None:intergenic | 35.0% |
| ! | TGCATTTTGCCGCAATATAA+AGG | - | chr4.1:72537839-72537858 | None:intergenic | 35.0% |
| ! | TGGACCAACTTTTGTCAAAT+TGG | + | chr4.1:72536961-72536980 | MS.gene76643:CDS | 35.0% |
| ! | TTTTCCAATGCAGATGGAAT+AGG | + | chr4.1:72540489-72540508 | MS.gene76643:intron | 35.0% |
| !! | AACTGATTTTGTCCCTGAAT+TGG | + | chr4.1:72537233-72537252 | MS.gene76643:intron | 35.0% |
| !! | AGAAATGGGTTGTTGAGATA+TGG | - | chr4.1:72535865-72535884 | None:intergenic | 35.0% |
| !! | ATATGGTTCTAAACCCTTCA+AGG | + | chr4.1:72536163-72536182 | MS.gene76643:CDS | 35.0% |
| !! | CAACTTGTTGCTTCAAGATA+TGG | + | chr4.1:72536146-72536165 | MS.gene76643:CDS | 35.0% |
| !! | CTTGAAAACCTTCTAGTTCA+GGG | + | chr4.1:72540512-72540531 | MS.gene76643:CDS | 35.0% |
| !! | GTATCTGAAGCTTTTACTCT+CGG | + | chr4.1:72540647-72540666 | MS.gene76643:CDS | 35.0% |
| !! | TATGTGCAGGTTAGTTCTTT+TGG | + | chr4.1:72538461-72538480 | MS.gene76643:intron | 35.0% |
| !! | TTGAAAACCTTCTAGTTCAG+GGG | + | chr4.1:72540513-72540532 | MS.gene76643:CDS | 35.0% |
| !!! | ATTTGGGTTGAAGCTTTTGT+GGG | + | chr4.1:72536865-72536884 | MS.gene76643:CDS | 35.0% |
| !!! | CGTTTTTGGTTTTGTTGTGT+AGG | + | chr4.1:72536802-72536821 | MS.gene76643:intron | 35.0% |
| AAACTTGAGCAAAGCTGCAA+AGG | - | chr4.1:72538915-72538934 | None:intergenic | 40.0% | |
| AACTTCAAGACGATTGTGGA+TGG | + | chr4.1:72539598-72539617 | MS.gene76643:CDS | 40.0% | |
| AACTTGAGCAAAGCTGCAAA+GGG | - | chr4.1:72538914-72538933 | None:intergenic | 40.0% | |
| AAGAAGCAATTGAGAGGCAA+GGG | + | chr4.1:72539236-72539255 | MS.gene76643:CDS | 40.0% | |
| ACAAGGTTCCTCAAAAAGTC+AGG | - | chr4.1:72540701-72540720 | None:intergenic | 40.0% | |
| ACATGCACGAAATAGTCAAC+AGG | - | chr4.1:72537633-72537652 | None:intergenic | 40.0% | |
| ACCTAAAGATGGTTCCCTTA+AGG | + | chr4.1:72536034-72536053 | MS.gene76643:CDS | 40.0% | |
| AGCTCAGAGATCAAGTGATT+AGG | + | chr4.1:72540783-72540802 | MS.gene76643:CDS | 40.0% | |
| AGGAACATACCGGTATGTTT+CGG | - | chr4.1:72540681-72540700 | None:intergenic | 40.0% | |
| ATTAAGGTCTCTCACTGTTC+TGG | + | chr4.1:72539989-72540008 | MS.gene76643:CDS | 40.0% | |
| ATTGCAAATCTCGCTTCTTC+TGG | - | chr4.1:72539418-72539437 | None:intergenic | 40.0% | |
| ATTTGGTCAAACTCTCCTTG+AGG | - | chr4.1:72537666-72537685 | None:intergenic | 40.0% | |
| CAACGGATAAAATGGAAAGG+AGG | - | chr4.1:72540225-72540244 | None:intergenic | 40.0% | |
| CATAAGTGTCTGTGCTACAA+AGG | + | chr4.1:72536659-72536678 | MS.gene76643:intron | 40.0% | |
| CCATTATAAAGACGCCTCAT+TGG | - | chr4.1:72538809-72538828 | None:intergenic | 40.0% | |
| CCCATTTCTTCATGGATTCA+TGG | + | chr4.1:72535876-72535895 | MS.gene76643:CDS | 40.0% | |
| CTATAGCTTCTTCAATGCCA+GGG | - | chr4.1:72538319-72538338 | None:intergenic | 40.0% | |
| CTCAAAGCTAAGTGTGTGTT+TGG | - | chr4.1:72537410-72537429 | None:intergenic | 40.0% | |
| CTCAACAACCCATTTCTTCA+TGG | + | chr4.1:72535868-72535887 | MS.gene76643:CDS | 40.0% | |
| CTTTAGGTGTAAGTCGTTCA+CGG | - | chr4.1:72538838-72538857 | None:intergenic | 40.0% | |
| GAAACCCTAAACCTCTAATG+AGG | - | chr4.1:72538355-72538374 | None:intergenic | 40.0% | |
| GAATGCATTGAGAGGGAATT+AGG | + | chr4.1:72538170-72538189 | MS.gene76643:CDS | 40.0% | |
| GCACAATTTCCGAAACATAC+CGG | + | chr4.1:72540669-72540688 | MS.gene76643:CDS | 40.0% | |
| GCACCAAAACTTCAGATTGA+AGG | - | chr4.1:72540940-72540959 | None:intergenic | 40.0% | |
| GCAGCAAGCACCTTAAAATT+GGG | - | chr4.1:72540038-72540057 | None:intergenic | 40.0% | |
| GCTTAACTTCAAGACGATTG+TGG | + | chr4.1:72539594-72539613 | MS.gene76643:CDS | 40.0% | |
| GGTAAAGACACAAGACAGAA+CGG | - | chr4.1:72540919-72540938 | None:intergenic | 40.0% | |
| GTCTTGGATCTAGTAAACAG+CGG | + | chr4.1:72539265-72539284 | MS.gene76643:CDS | 40.0% | |
| TACAACTATGACCGCAATAC+AGG | - | chr4.1:72537922-72537941 | None:intergenic | 40.0% | |
| TCAAAACACAACATTGGCGA+AGG | - | chr4.1:72541163-72541182 | None:intergenic | 40.0% | |
| TGAACGACTTACACCTAAAG+CGG | + | chr4.1:72538838-72538857 | MS.gene76643:intron | 40.0% | |
| TGCAGCAAGCACCTTAAAAT+TGG | - | chr4.1:72540039-72540058 | None:intergenic | 40.0% | |
| TGTCTTCAATGGCAATGCAA+AGG | + | chr4.1:72540718-72540737 | MS.gene76643:CDS | 40.0% | |
| TTCCCTCTCAATGCATTCAA+AGG | - | chr4.1:72538168-72538187 | None:intergenic | 40.0% | |
| TTGAGGAACCTTGTCTTCAA+TGG | + | chr4.1:72540707-72540726 | MS.gene76643:CDS | 40.0% | |
| TTGCATTGCCATTGAAGACA+AGG | - | chr4.1:72540718-72540737 | None:intergenic | 40.0% | |
| TTGGACTTCTACCTCATTAG+AGG | + | chr4.1:72538341-72538360 | MS.gene76643:CDS | 40.0% | |
| TTGTCCATCTGAGTATCTTG+AGG | + | chr4.1:72537012-72537031 | MS.gene76643:CDS | 40.0% | |
| TTGTGTGCTTTACCTTTACC+AGG | + | chr4.1:72538112-72538131 | MS.gene76643:intron | 40.0% | |
| TTTCGAAGTGCAGGAACAAT+TGG | - | chr4.1:72539538-72539557 | None:intergenic | 40.0% | |
| ! | AATCTTTTGGCAACACCAGA+GGG | + | chr4.1:72539352-72539371 | MS.gene76643:CDS | 40.0% |
| ! | AGAAAAGCAAGTTTTCCCTC+TGG | - | chr4.1:72539370-72539389 | None:intergenic | 40.0% |
| ! | CATGTGATTTTCTTGCCTCA+AGG | + | chr4.1:72537648-72537667 | MS.gene76643:intron | 40.0% |
| ! | CCAATGAGGCGTCTTTATAA+TGG | + | chr4.1:72538806-72538825 | MS.gene76643:intron | 40.0% |
| ! | GGTATGTTCCTGACTTTTTG+AGG | + | chr4.1:72540690-72540709 | MS.gene76643:CDS | 40.0% |
| ! | TAATCTTTTGGCAACACCAG+AGG | + | chr4.1:72539351-72539370 | MS.gene76643:CDS | 40.0% |
| ! | TCATGCTGAAGCAAAAGCAT+TGG | + | chr4.1:72536091-72536110 | MS.gene76643:CDS | 40.0% |
| ! | TCCTCATCCTGGTAATCTTT+TGG | + | chr4.1:72539339-72539358 | MS.gene76643:CDS | 40.0% |
| ! | TCTTTTGCTACCGATACTAC+AGG | + | chr4.1:72540847-72540866 | MS.gene76643:CDS | 40.0% |
| ! | TGTTGAGATATGGTGGAAGA+AGG | - | chr4.1:72535855-72535874 | None:intergenic | 40.0% |
| !! | AAGGTATTGTTGAGTCCTGA+TGG | + | chr4.1:72540584-72540603 | MS.gene76643:CDS | 40.0% |
| !! | AATGGGTTGTTGAGATATGG+TGG | - | chr4.1:72535862-72535881 | None:intergenic | 40.0% |
| !! | AGTATCGGTAGCAAAAGAGA+TGG | - | chr4.1:72540845-72540864 | None:intergenic | 40.0% |
| !! | ATGTTTGGTTCCACTTTTGG+AGG | + | chr4.1:72537149-72537168 | MS.gene76643:intron | 40.0% |
| !! | GAACTGTGTTGATCCGTTTT+TGG | + | chr4.1:72536788-72536807 | MS.gene76643:intron | 40.0% |
| !! | GCTTGAAAACCTTCTAGTTC+AGG | + | chr4.1:72540511-72540530 | MS.gene76643:CDS | 40.0% |
| !! | TAATTTTGACAGGTTCCTGC+AGG | + | chr4.1:72539078-72539097 | MS.gene76643:intron | 40.0% |
| !! | TCCTTAGTTAAAAGGCGCTT+CGG | + | chr4.1:72541253-72541272 | MS.gene76643:intron | 40.0% |
| !!! | CATTTGGGTTGAAGCTTTTG+TGG | + | chr4.1:72536864-72536883 | MS.gene76643:CDS | 40.0% |
| !!! | TGGTTTTGTTGTGTAGGTTG+CGG | + | chr4.1:72536808-72536827 | MS.gene76643:intron | 40.0% |
| AAAGCAGTGCAGCAAACTTG+AGG | - | chr4.1:72541186-72541205 | None:intergenic | 45.0% | |
| AAGACGATTGTGGATGGTCT+CGG | + | chr4.1:72539604-72539623 | MS.gene76643:CDS | 45.0% | |
| ACATGTGTTGGACACTAGCA+TGG | + | chr4.1:72536600-72536619 | MS.gene76643:intron | 45.0% | |
| ACATGTGTTGGACACTGACA+CGG | + | chr4.1:72536390-72536409 | MS.gene76643:intron | 45.0% | |
| ACCTAAAGCGGACAATACCT+CGG | + | chr4.1:72538850-72538869 | MS.gene76643:intron | 45.0% | |
| ACGCCTTTGAATGCATTGAG+AGG | + | chr4.1:72538162-72538181 | MS.gene76643:CDS | 45.0% | |
| AGACCTCATCTCCTGTATTG+CGG | + | chr4.1:72537908-72537927 | MS.gene76643:intron | 45.0% | |
| AGCTCCTCAAGATACTCAGA+TGG | - | chr4.1:72537019-72537038 | None:intergenic | 45.0% | |
| ATCCTTACTGATCCGGACAA+GGG | - | chr4.1:72541427-72541446 | None:intergenic | 45.0% | |
| ATGCTGGAACTGCAAACAGA+TGG | - | chr4.1:72539956-72539975 | None:intergenic | 45.0% | |
| CAAGAAGCAATTGAGAGGCA+AGG | + | chr4.1:72539235-72539254 | MS.gene76643:CDS | 45.0% | |
| CAAGCCTATTCCATCTGCAT+TGG | - | chr4.1:72540496-72540515 | None:intergenic | 45.0% | |
| CAAGGTCATCCTTACTGATC+CGG | - | chr4.1:72541434-72541453 | None:intergenic | 45.0% | |
| CAGGACTCAACAATACCTTC+AGG | - | chr4.1:72540583-72540602 | None:intergenic | 45.0% | |
| CATAAGTGTCTGTGCTACAG+AGG | + | chr4.1:72536438-72536457 | MS.gene76643:intron | 45.0% | |
| CCTAAACTAGCAGCAGCTAT+CGG | - | chr4.1:72538236-72538255 | None:intergenic | 45.0% | |
| CCTATAGCTTCTTCAATGCC+AGG | - | chr4.1:72538320-72538339 | None:intergenic | 45.0% | |
| CGCCTTTGAATGCATTGAGA+GGG | + | chr4.1:72538163-72538182 | MS.gene76643:CDS | 45.0% | |
| CTAACGATCGATTGGATCGA+AGG | + | chr4.1:72539196-72539215 | MS.gene76643:CDS | 45.0% | |
| CTCAACAATACCTTCAGGAC+AGG | - | chr4.1:72540578-72540597 | None:intergenic | 45.0% | |
| GAAATGTTGGCAAACCATCC+TGG | - | chr4.1:72538133-72538152 | None:intergenic | 45.0% | |
| GCAGAAAGATGCAGCTGATA+TGG | + | chr4.1:72537856-72537875 | MS.gene76643:intron | 45.0% | |
| GCCAAAAGATTACCAGGATG+AGG | - | chr4.1:72539343-72539362 | None:intergenic | 45.0% | |
| GCCTTAAGGGAACCATCTTT+AGG | - | chr4.1:72536038-72536057 | None:intergenic | 45.0% | |
| GTATTGGAACAGTATCCCTG+CGG | + | chr4.1:72541346-72541365 | MS.gene76643:intron | 45.0% | |
| GTGCTTTACCTTTACCAGGA+TGG | + | chr4.1:72538116-72538135 | MS.gene76643:intron | 45.0% | |
| GTTTGGATTCAAGGTGAGCT+TGG | - | chr4.1:72537765-72537784 | None:intergenic | 45.0% | |
| TAACCGAGACTACGAAGCTA+TGG | + | chr4.1:72539462-72539481 | MS.gene76643:CDS | 45.0% | |
| TAAGGCTCTTGCTCTTCCAA+TGG | + | chr4.1:72536052-72536071 | MS.gene76643:CDS | 45.0% | |
| TACCTTCAGGACAGGTTGTA+AGG | - | chr4.1:72540570-72540589 | None:intergenic | 45.0% | |
| TATCGGCGATGGAGATATTG+TGG | - | chr4.1:72538219-72538238 | None:intergenic | 45.0% | |
| TGGAAGAGCAAGAGCCTTAA+GGG | - | chr4.1:72536051-72536070 | None:intergenic | 45.0% | |
| TTCCTCAGAACTTCACCATC+AGG | - | chr4.1:72540602-72540621 | None:intergenic | 45.0% | |
| TTGGAAGAGCAAGAGCCTTA+AGG | - | chr4.1:72536052-72536071 | None:intergenic | 45.0% | |
| TTGGCAAACCATCCTGGTAA+AGG | - | chr4.1:72538127-72538146 | None:intergenic | 45.0% | |
| TTGGGACTATACAAGTGCGA+AGG | + | chr4.1:72539171-72539190 | MS.gene76643:CDS | 45.0% | |
| TTGTCTGGGAAACGAGTCTA+AGG | - | chr4.1:72541310-72541329 | None:intergenic | 45.0% | |
| TTTCGAGGATTGTCTGCTTC+AGG | + | chr4.1:72541205-72541224 | MS.gene76643:intron | 45.0% | |
| TTTGCCAACATTTCCTGACG+AGG | + | chr4.1:72538139-72538158 | MS.gene76643:CDS | 45.0% | |
| ! | CCTGGCATTGAAGAAGCTAT+AGG | + | chr4.1:72538317-72538336 | MS.gene76643:CDS | 45.0% |
| ! | CTTTTCTCCCCTGAACTAGA+AGG | - | chr4.1:72540523-72540542 | None:intergenic | 45.0% |
| ! | CTTTTGTGGGAGCAGAGAAA+TGG | + | chr4.1:72536878-72536897 | MS.gene76643:CDS | 45.0% |
| ! | GCACCGACACTTTAGATTGA+AGG | - | chr4.1:72539834-72539853 | None:intergenic | 45.0% |
| ! | GGTGTTGCCAAAAGATTACC+AGG | - | chr4.1:72539349-72539368 | None:intergenic | 45.0% |
| ! | GTAGGTGTTGTACCAGAACA+GGG | - | chr4.1:72538776-72538795 | None:intergenic | 45.0% |
| ! | TGTAGGTGTTGTACCAGAAC+AGG | - | chr4.1:72538777-72538796 | None:intergenic | 45.0% |
| !! | AAAATCATGGTGTCACACCG+TGG | + | chr4.1:72537734-72537753 | MS.gene76643:intron | 45.0% |
| !! | ACCGAAGCGCCTTTTAACTA+AGG | - | chr4.1:72541257-72541276 | None:intergenic | 45.0% |
| !! | CGAAGGTACTAACGATCGAT+TGG | + | chr4.1:72539188-72539207 | MS.gene76643:CDS | 45.0% |
| !! | TAGTTAAAAGGCGCTTCGGT+GGG | + | chr4.1:72541257-72541276 | MS.gene76643:intron | 45.0% |
| !! | TTAGTTAAAAGGCGCTTCGG+TGG | + | chr4.1:72541256-72541275 | MS.gene76643:intron | 45.0% |
| !! | TTCACAGTTTCGTGCTGCTT+TGG | + | chr4.1:72535965-72535984 | MS.gene76643:CDS | 45.0% |
| !!! | GGTTTTGTTGTGTAGGTTGC+GGG | + | chr4.1:72536809-72536828 | MS.gene76643:intron | 45.0% |
| !!! | TTTGCTGCACTGCTTTTTCG+AGG | + | chr4.1:72541190-72541209 | MS.gene76643:intron | 45.0% |
| AACCTGAGGCCCGTAAACTT+GGG | + | chr4.1:72541668-72541687 | MS.gene76643:CDS | 50.0% | |
| CATCCTTACTGATCCGGACA+AGG | - | chr4.1:72541428-72541447 | None:intergenic | 50.0% | |
| CGATGCTGACATTGACACAC+AGG | + | chr4.1:72539763-72539782 | MS.gene76643:intron | 50.0% | |
| CTACACTCCTCAACCCAATG+AGG | + | chr4.1:72538792-72538811 | MS.gene76643:intron | 50.0% | |
| CTCAGACAACTGCTCGAGTA+CGG | + | chr4.1:72539301-72539320 | MS.gene76643:CDS | 50.0% | |
| GAGCCATAGCTTCGTAGTCT+CGG | - | chr4.1:72539468-72539487 | None:intergenic | 50.0% | |
| GAGGCTAAGGAGTTAGAGGA+TGG | + | chr4.1:72541371-72541390 | MS.gene76643:intron | 50.0% | |
| GTGTTGGACACTAGCATGGA+TGG | + | chr4.1:72536604-72536623 | MS.gene76643:intron | 50.0% | |
| TAAAGCTCGGTTGAAGCGGT+CGG | + | chr4.1:72538265-72538284 | MS.gene76643:CDS | 50.0% | |
| TACCAGGATGAGGATCTGCA+TGG | - | chr4.1:72539333-72539352 | None:intergenic | 50.0% | |
| TCCTTACTGATCCGGACAAG+GGG | - | chr4.1:72541426-72541445 | None:intergenic | 50.0% | |
| TGACCGCAATACAGGAGATG+AGG | - | chr4.1:72537914-72537933 | None:intergenic | 50.0% | |
| TGCAGGAGGGACAAAATGCA+AGG | + | chr4.1:72539095-72539114 | MS.gene76643:intron | 50.0% | |
| TGTTGGACACTGACACGGAT+AGG | + | chr4.1:72536395-72536414 | MS.gene76643:intron | 50.0% | |
| TGTTGTGTAGGTTGCGGGAA+GGG | + | chr4.1:72536814-72536833 | MS.gene76643:intron | 50.0% | |
| TTCCATGCAGATCCTCATCC+TGG | + | chr4.1:72539328-72539347 | MS.gene76643:CDS | 50.0% | |
| TTGTTGTGTAGGTTGCGGGA+AGG | + | chr4.1:72536813-72536832 | MS.gene76643:intron | 50.0% | |
| TTTGACAGGTTCCTGCAGGA+GGG | + | chr4.1:72539082-72539101 | MS.gene76643:intron | 50.0% | |
| ! | AAAGACGCCTCATTGGGTTG+AGG | - | chr4.1:72538802-72538821 | None:intergenic | 50.0% |
| ! | AGCTGCTGCTAGTTTAGGTC+AGG | + | chr4.1:72538238-72538257 | MS.gene76643:CDS | 50.0% |
| ! | AGGTCTCTCACTGTTCTGGA+AGG | + | chr4.1:72539993-72540012 | MS.gene76643:CDS | 50.0% |
| ! | CCGATAGCTGCTGCTAGTTT+AGG | + | chr4.1:72538233-72538252 | MS.gene76643:CDS | 50.0% |
| ! | GTCCTGATGGTGAAGTTCTG+AGG | + | chr4.1:72540597-72540616 | MS.gene76643:CDS | 50.0% |
| ! | TTGCATTTTGTCCCTCCTGC+AGG | - | chr4.1:72539096-72539115 | None:intergenic | 50.0% |
| ! | TTTTGACAGGTTCCTGCAGG+AGG | + | chr4.1:72539081-72539100 | MS.gene76643:intron | 50.0% |
| !! | CTCATTGGGTTGAGGAGTGT+AGG | - | chr4.1:72538794-72538813 | None:intergenic | 50.0% |
| !! | TCCGAGGTATTGTCCGCTTT+AGG | - | chr4.1:72538854-72538873 | None:intergenic | 50.0% |
| AAAGCTCGGTTGAAGCGGTC+GGG | + | chr4.1:72538266-72538285 | MS.gene76643:CDS | 55.0% | |
| AACACGCCCCCCAAGTTTAC+GGG | - | chr4.1:72541680-72541699 | None:intergenic | 55.0% | |
| AATGCGGTGTGGCGTACTTG+AGG | + | chr4.1:72538873-72538892 | MS.gene76643:intron | 55.0% | |
| ACAGGTGCTTCAGCAACCTG+AGG | + | chr4.1:72541654-72541673 | MS.gene76643:intron | 55.0% | |
| ACCTGAGGCCCGTAAACTTG+GGG | + | chr4.1:72541669-72541688 | MS.gene76643:CDS | 55.0% | |
| AGGAGATGAGGTCTCCGCAA+CGG | - | chr4.1:72537902-72537921 | None:intergenic | 55.0% | |
| AGGTGAGCTTGGCTGAACCA+CGG | - | chr4.1:72537754-72537773 | None:intergenic | 55.0% | |
| CAACACGCCCCCCAAGTTTA+CGG | - | chr4.1:72541681-72541700 | None:intergenic | 55.0% | |
| CAACCTGAGGCCCGTAAACT+TGG | + | chr4.1:72541667-72541686 | MS.gene76643:CDS | 55.0% | |
| CAATACCTCGGAATGCGGTG+TGG | + | chr4.1:72538862-72538881 | MS.gene76643:intron | 55.0% | |
| CCTTACTGATCCGGACAAGG+GGG | - | chr4.1:72541425-72541444 | None:intergenic | 55.0% | |
| CTTACTGATCCGGACAAGGG+GGG | - | chr4.1:72541424-72541443 | None:intergenic | 55.0% | |
| CTTCTTCAATGCCAGGGCGT+TGG | - | chr4.1:72538313-72538332 | None:intergenic | 55.0% | |
| GAGGCAAGGGCTTAACGTCT+TGG | + | chr4.1:72539249-72539268 | MS.gene76643:CDS | 55.0% | |
| GCGGACAATACCTCGGAATG+CGG | + | chr4.1:72538857-72538876 | MS.gene76643:intron | 55.0% | |
| GCGTCCTCGTCAGGAAATGT+TGG | - | chr4.1:72538146-72538165 | None:intergenic | 55.0% | |
| GGCCTTACAACCTGTCCTGA+AGG | + | chr4.1:72540565-72540584 | MS.gene76643:CDS | 55.0% | |
| GGGCAAAGTTGTTGCGGTCA+AGG | + | chr4.1:72538286-72538305 | MS.gene76643:CDS | 55.0% | |
| GGTCGAGGCTAAGGAGTTAG+AGG | + | chr4.1:72541367-72541386 | MS.gene76643:intron | 55.0% | |
| TGGGTCAAGGGCTGTCTACT+AGG | + | chr4.1:72536981-72537000 | MS.gene76643:CDS | 55.0% | |
| TTAGCCCACGTGTGTGGCTT+AGG | + | chr4.1:72541398-72541417 | MS.gene76643:intron | 55.0% | |
| ! | AAACTTGGGGGGCGTGTTGT+CGG | + | chr4.1:72541682-72541701 | MS.gene76643:CDS | 55.0% |
| !! | CATTCAAAGGCGTCCTCGTC+AGG | - | chr4.1:72538155-72538174 | None:intergenic | 55.0% |
| AACTCCTTAGCCTCGACCGC+AGG | - | chr4.1:72541365-72541384 | None:intergenic | 60.0% | |
| ACTCCTTAGCCTCGACCGCA+GGG | - | chr4.1:72541364-72541383 | None:intergenic | 60.0% | |
| CCCCCTTGTCCGGATCAGTA+AGG | + | chr4.1:72541422-72541441 | MS.gene76643:intron | 60.0% | |
| CCTGAGGCCCGTAAACTTGG+GGG | + | chr4.1:72541670-72541689 | MS.gene76643:CDS | 60.0% | |
| CGGTGTGGCGTACTTGAGGA+TGG | + | chr4.1:72538877-72538896 | MS.gene76643:intron | 60.0% | |
| CTAGCAGCAGCTATCGGCGA+TGG | - | chr4.1:72538230-72538249 | None:intergenic | 60.0% | |
| CTGAGGCCCGTAAACTTGGG+GGG | + | chr4.1:72541671-72541690 | MS.gene76643:CDS | 60.0% | |
| GAACAGTATCCCTGCGGTCG+AGG | + | chr4.1:72541352-72541371 | MS.gene76643:intron | 60.0% | |
| GCGGTCGGGCAAAGTTGTTG+CGG | + | chr4.1:72538280-72538299 | MS.gene76643:CDS | 60.0% | |
| TATCCCTGCGGTCGAGGCTA+AGG | + | chr4.1:72541358-72541377 | MS.gene76643:intron | 60.0% | |
| TTGCGGCTGTGATGCCGTTG+CGG | + | chr4.1:72537885-72537904 | MS.gene76643:intron | 60.0% | |
| ! | AGCCACACACGTGGGCTAAC+AGG | - | chr4.1:72541397-72541416 | None:intergenic | 60.0% |
| CCCCCAAGTTTACGGGCCTC+AGG | - | chr4.1:72541673-72541692 | None:intergenic | 65.0% | |
| GGCCTGTTAGCCCACGTGTG+TGG | + | chr4.1:72541392-72541411 | MS.gene76643:intron | 65.0% | |
| GGGGCCTAAGCCACACACGT+GGG | - | chr4.1:72541405-72541424 | None:intergenic | 65.0% | |
| GTACGCCACACCGCATTCCG+AGG | - | chr4.1:72538870-72538889 | None:intergenic | 65.0% | |
| TGGCTTAGGCCCCCCTTGTC+CGG | + | chr4.1:72541412-72541431 | MS.gene76643:intron | 65.0% | |
| GCGGTCAAGGTCCAACGCCC+TGG | + | chr4.1:72538299-72538318 | MS.gene76643:CDS | 70.0% | |
| GGGGGCCTAAGCCACACACG+TGG | - | chr4.1:72541406-72541425 | None:intergenic | 70.0% | |
| ! | CTTGGGGGGCGTGTTGTCGG+TGG | + | chr4.1:72541685-72541704 | MS.gene76643:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 72535837 | 72541777 | 72535837 | ID=MS.gene76643 |
| chr4.1 | mRNA | 72535837 | 72541777 | 72535837 | ID=MS.gene76643.t1;Parent=MS.gene76643 |
| chr4.1 | exon | 72535837 | 72536184 | 72535837 | ID=MS.gene76643.t1.exon1;Parent=MS.gene76643.t1 |
| chr4.1 | CDS | 72535837 | 72536184 | 72535837 | ID=cds.MS.gene76643.t1;Parent=MS.gene76643.t1 |
| chr4.1 | exon | 72536824 | 72537051 | 72536824 | ID=MS.gene76643.t1.exon2;Parent=MS.gene76643.t1 |
| chr4.1 | CDS | 72536824 | 72537051 | 72536824 | ID=cds.MS.gene76643.t1;Parent=MS.gene76643.t1 |
| chr4.1 | exon | 72538134 | 72538469 | 72538134 | ID=MS.gene76643.t1.exon3;Parent=MS.gene76643.t1 |
| chr4.1 | CDS | 72538134 | 72538469 | 72538134 | ID=cds.MS.gene76643.t1;Parent=MS.gene76643.t1 |
| chr4.1 | exon | 72539100 | 72539655 | 72539100 | ID=MS.gene76643.t1.exon4;Parent=MS.gene76643.t1 |
| chr4.1 | CDS | 72539100 | 72539655 | 72539100 | ID=cds.MS.gene76643.t1;Parent=MS.gene76643.t1 |
| chr4.1 | exon | 72539967 | 72540153 | 72539967 | ID=MS.gene76643.t1.exon5;Parent=MS.gene76643.t1 |
| chr4.1 | CDS | 72539967 | 72540153 | 72539967 | ID=cds.MS.gene76643.t1;Parent=MS.gene76643.t1 |
| chr4.1 | exon | 72540502 | 72540868 | 72540502 | ID=MS.gene76643.t1.exon6;Parent=MS.gene76643.t1 |
| chr4.1 | CDS | 72540502 | 72540868 | 72540502 | ID=cds.MS.gene76643.t1;Parent=MS.gene76643.t1 |
| chr4.1 | exon | 72541658 | 72541777 | 72541658 | ID=MS.gene76643.t1.exon7;Parent=MS.gene76643.t1 |
| chr4.1 | CDS | 72541658 | 72541777 | 72541658 | ID=cds.MS.gene76643.t1;Parent=MS.gene76643.t1 |
| Gene Sequence |
| Protein sequence |
