Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81375.t1 | XP_003617732.1 | 76 | 446 | 65 | 4 | 1 | 441 | 1 | 409 | 2.30E-95 | 359.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81375.t1 | G7K4H5 | 76.0 | 446 | 65 | 4 | 1 | 441 | 1 | 409 | 1.6e-95 | 359.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049404 | MS.gene81375 | 0.802064 | 6.70E-49 | -1.69E-46 |
| MS.gene049825 | MS.gene81375 | 0.800554 | 1.36E-48 | -1.69E-46 |
| MS.gene049873 | MS.gene81375 | 0.815232 | 1.03E-51 | -1.69E-46 |
| MS.gene049878 | MS.gene81375 | 0.800643 | 1.31E-48 | -1.69E-46 |
| MS.gene050020 | MS.gene81375 | 0.801051 | 1.08E-48 | -1.69E-46 |
| MS.gene05016 | MS.gene81375 | 0.827734 | 1.33E-54 | -1.69E-46 |
| MS.gene050201 | MS.gene81375 | 0.800109 | 1.68E-48 | -1.69E-46 |
| MS.gene050303 | MS.gene81375 | 0.813707 | 2.23E-51 | -1.69E-46 |
| MS.gene050355 | MS.gene81375 | 0.818211 | 2.21E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene81375 | 0.817527 | 3.15E-52 | -1.69E-46 |
| MS.gene050680 | MS.gene81375 | 0.808746 | 2.66E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene81375 | 0.816173 | 6.34E-52 | -1.69E-46 |
| MS.gene050780 | MS.gene81375 | 0.802867 | 4.57E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene81375 | 0.823946 | 1.05E-53 | -1.69E-46 |
| MS.gene050905 | MS.gene81375 | -0.803622 | 3.19E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene81375 | 0.825883 | 3.68E-54 | -1.69E-46 |
| MS.gene051265 | MS.gene81375 | 0.802591 | 5.22E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene81375 | 0.810174 | 1.31E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene81375 | 0.821252 | 4.46E-53 | -1.69E-46 |
| MS.gene052208 | MS.gene81375 | 0.810969 | 8.85E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene81375 | 0.806547 | 7.80E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene81375 | -0.802946 | 4.41E-49 | -1.69E-46 |
| MS.gene052358 | MS.gene81375 | -0.82339 | 1.42E-53 | -1.69E-46 |
| MS.gene052376 | MS.gene81375 | 0.814638 | 1.39E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene81375 | 0.808631 | 2.82E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene81375 | 0.804548 | 2.05E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene81375 | 0.818322 | 2.08E-52 | -1.69E-46 |
| MS.gene053054 | MS.gene81375 | -0.811396 | 7.15E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene81375 | 0.82052 | 6.57E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene81375 | 0.807275 | 5.47E-50 | -1.69E-46 |
| MS.gene053883 | MS.gene81375 | 0.801692 | 7.99E-49 | -1.69E-46 |
| MS.gene053953 | MS.gene81375 | 0.823456 | 1.37E-53 | -1.69E-46 |
| MS.gene05414 | MS.gene81375 | 0.819423 | 1.17E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene81375 | 0.829858 | 4.07E-55 | -1.69E-46 |
| MS.gene054291 | MS.gene81375 | -0.803269 | 3.78E-49 | -1.69E-46 |
| MS.gene054405 | MS.gene81375 | 0.820421 | 6.92E-53 | -1.69E-46 |
| MS.gene054559 | MS.gene81375 | 0.802911 | 4.48E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene81375 | 0.804734 | 1.87E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene81375 | 0.807217 | 5.63E-50 | -1.69E-46 |
| MS.gene05510 | MS.gene81375 | 0.806689 | 7.28E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene81375 | 0.816067 | 6.69E-52 | -1.69E-46 |
| MS.gene055357 | MS.gene81375 | 0.800001 | 1.77E-48 | -1.69E-46 |
| MS.gene055358 | MS.gene81375 | 0.822312 | 2.53E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene81375 | 0.801753 | 7.76E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene81375 | 0.813491 | 2.49E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene81375 | 0.834186 | 3.47E-56 | -1.69E-46 |
| MS.gene055808 | MS.gene81375 | 0.817455 | 3.27E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene81375 | 0.833752 | 4.45E-56 | -1.69E-46 |
| MS.gene05604 | MS.gene81375 | 0.812293 | 4.56E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene81375 | 0.806184 | 9.31E-50 | -1.69E-46 |
| MS.gene056498 | MS.gene81375 | 0.834767 | 2.48E-56 | -1.69E-46 |
| MS.gene056506 | MS.gene81375 | 0.828498 | 8.69E-55 | -1.69E-46 |
| MS.gene056642 | MS.gene81375 | 0.820603 | 6.29E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene81375 | 0.821623 | 3.66E-53 | -1.69E-46 |
| MS.gene057027 | MS.gene81375 | 0.81132 | 7.43E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene81375 | 0.900008 | 1.13E-77 | -1.69E-46 |
| MS.gene057079 | MS.gene81375 | 0.80095 | 1.13E-48 | -1.69E-46 |
| MS.gene057200 | MS.gene81375 | 0.803513 | 3.36E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene81375 | 0.801803 | 7.58E-49 | -1.69E-46 |
| MS.gene057414 | MS.gene81375 | 0.825151 | 5.48E-54 | -1.69E-46 |
| MS.gene057444 | MS.gene81375 | 0.8372 | 5.98E-57 | -1.69E-46 |
| MS.gene057555 | MS.gene81375 | 0.820379 | 7.07E-53 | -1.69E-46 |
| MS.gene057693 | MS.gene81375 | 0.8117 | 6.14E-51 | -1.69E-46 |
| MS.gene05795 | MS.gene81375 | 0.831699 | 1.44E-55 | -1.69E-46 |
| MS.gene058625 | MS.gene81375 | 0.826662 | 2.40E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene81375 | 0.818807 | 1.62E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene81375 | 0.839786 | 1.29E-57 | -1.69E-46 |
| MS.gene059569 | MS.gene81375 | 0.823097 | 1.66E-53 | -1.69E-46 |
| MS.gene060137 | MS.gene81375 | -0.809545 | 1.79E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene81375 | 0.810856 | 9.36E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene81375 | 0.820203 | 7.76E-53 | -1.69E-46 |
| MS.gene060521 | MS.gene81375 | 0.821157 | 4.69E-53 | -1.69E-46 |
| MS.gene060572 | MS.gene81375 | 0.829039 | 6.43E-55 | -1.69E-46 |
| MS.gene060587 | MS.gene81375 | 0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene060634 | MS.gene81375 | -0.82876 | 7.52E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene81375 | 0.810544 | 1.09E-50 | -1.69E-46 |
| MS.gene060918 | MS.gene81375 | 0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene81375 | -0.847414 | 1.17E-59 | -1.69E-46 |
| MS.gene061114 | MS.gene81375 | -0.82171 | 3.49E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81375.t1 | MTR_5g094850 | 78.689 | 549 | 66 | 8 | 1 | 543 | 1 | 504 | 0.0 | 782 |
| MS.gene81375.t1 | MTR_5g094850 | 74.818 | 548 | 66 | 8 | 1 | 543 | 1 | 481 | 0.0 | 724 |
| MS.gene81375.t1 | MTR_5g094960 | 50.755 | 530 | 141 | 9 | 1 | 510 | 3 | 432 | 2.07e-141 | 417 |
| MS.gene81375.t1 | MTR_5g094920 | 48.889 | 585 | 207 | 15 | 1 | 543 | 3 | 537 | 2.82e-132 | 395 |
| MS.gene81375.t1 | MTR_5g094990 | 49.812 | 532 | 144 | 10 | 1 | 510 | 3 | 433 | 2.69e-122 | 368 |
| MS.gene81375.t1 | MTR_5g094950 | 41.667 | 588 | 189 | 16 | 1 | 508 | 3 | 516 | 3.77e-94 | 298 |
| MS.gene81375.t1 | MTR_5g095390 | 66.176 | 272 | 40 | 6 | 1 | 269 | 1 | 223 | 4.52e-90 | 281 |
| MS.gene81375.t1 | MTR_5g095390 | 44.000 | 200 | 40 | 9 | 347 | 543 | 239 | 369 | 1.19e-25 | 108 |
| MS.gene81375.t1 | MTR_5g094910 | 48.592 | 284 | 69 | 8 | 1 | 266 | 3 | 227 | 3.09e-58 | 199 |
| MS.gene81375.t1 | MTR_5g094910 | 39.216 | 153 | 47 | 3 | 358 | 510 | 243 | 349 | 2.96e-21 | 96.3 |
| MS.gene81375.t1 | MTR_5g095050 | 38.338 | 373 | 124 | 5 | 2 | 272 | 4 | 372 | 1.59e-51 | 185 |
| MS.gene81375.t1 | MTR_5g094970 | 46.296 | 270 | 80 | 4 | 61 | 266 | 8 | 276 | 5.53e-49 | 172 |
| MS.gene81375.t1 | MTR_5g095370 | 37.917 | 240 | 86 | 8 | 2 | 241 | 4 | 180 | 1.20e-26 | 108 |
| MS.gene81375.t1 | MTR_5g095400 | 44.966 | 149 | 67 | 3 | 20 | 164 | 6 | 143 | 9.85e-22 | 99.4 |
| MS.gene81375.t1 | MTR_5g095310 | 44.697 | 132 | 59 | 2 | 25 | 153 | 2 | 122 | 4.30e-19 | 89.4 |
| MS.gene81375.t1 | MTR_5g095430 | 42.361 | 144 | 68 | 3 | 25 | 164 | 2 | 134 | 1.17e-18 | 89.7 |
| MS.gene81375.t1 | MTR_5g077500 | 44.444 | 126 | 59 | 2 | 149 | 266 | 96 | 218 | 2.98e-16 | 79.7 |
| MS.gene81375.t1 | MTR_5g095360 | 48.780 | 82 | 41 | 1 | 65 | 145 | 5 | 86 | 9.28e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 111 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGCTGCTGGTGCTGTTT+TGG | 0.190317 | 5.2:-79975840 | MS.gene81375:CDS |
| TAATGATCATCTTGATTTAT+TGG | 0.203669 | 5.2:+79975246 | None:intergenic |
| GATGGACTTAAGGTTAAAAT+TGG | 0.205009 | 5.2:-79976175 | MS.gene81375:CDS |
| AACAAAGATTGTTGAATTAG+AGG | 0.277435 | 5.2:-79976350 | MS.gene81375:CDS |
| AGCTTGGGTGCTATGGCTTT+TGG | 0.277666 | 5.2:-79975791 | MS.gene81375:intron |
| ATTGTTAGGCTTTGTGGAAT+TGG | 0.283522 | 5.2:+79976789 | None:intergenic |
| TAAGGTTAAAATTGGAGAAT+TGG | 0.289099 | 5.2:-79976167 | MS.gene81375:CDS |
| AAATGCTTTGGATGGACTTA+AGG | 0.315634 | 5.2:-79976185 | MS.gene81375:CDS |
| TGGTGACCCAGGTTCAGTTT+TGG | 0.318302 | 5.2:+79976819 | None:intergenic |
| TGAATTAGAGAGCAAGGTTT+TGG | 0.320663 | 5.2:-79976245 | MS.gene81375:CDS |
| TCGGGCTTAGATGCCTCTAT+TGG | 0.322418 | 5.2:-79975432 | MS.gene81375:intron |
| TGATAGTGTTGAAGCTGTTT+TGG | 0.323247 | 5.2:-79976701 | MS.gene81375:CDS |
| CATTTAAAGAAAGCTAGTTT+TGG | 0.330754 | 5.2:-79973626 | MS.gene81375:CDS |
| GGAGACAGTAAAGAAGAATT+TGG | 0.339017 | 5.2:-79976143 | MS.gene81375:CDS |
| TTCAAGATTGTTAGGCTTTG+TGG | 0.342117 | 5.2:+79976783 | None:intergenic |
| TGAAAAGAAGAACAATGAAT+TGG | 0.364681 | 5.2:-79976437 | MS.gene81375:CDS |
| AGGAAAACGGTTGAGATTAC+AGG | 0.365163 | 5.2:-79974350 | MS.gene81375:CDS |
| AGTAGAAGTGGAGGTGGAAG+TGG | 0.367803 | 5.2:+79973481 | None:intergenic |
| GTCTATTCATGATCTTGTTA+TGG | 0.368869 | 5.2:-79976755 | MS.gene81375:CDS |
| GTTGCAACAAAGCTTTGAAA+TGG | 0.369757 | 5.2:-79976641 | MS.gene81375:CDS |
| GAGAGGAAATTTGTGAGAAA+GGG | 0.390161 | 5.2:-79976543 | MS.gene81375:CDS |
| GAGGAATGAAAGCAGCAAAT+TGG | 0.390389 | 5.2:-79976104 | MS.gene81375:CDS |
| CAAGATGATCATTACACTCT+TGG | 0.393009 | 5.2:-79975237 | MS.gene81375:CDS |
| CTCATTGTTGCCACCAATAG+AGG | 0.396366 | 5.2:+79975419 | None:intergenic |
| GGAGGAAGATGACATTGAAT+TGG | 0.407668 | 5.2:-79976290 | MS.gene81375:CDS |
| AGAGAGGAAATTTGTGAGAA+AGG | 0.411748 | 5.2:-79976544 | MS.gene81375:CDS |
| TGTTGGCAGCTTGGGTGCTA+TGG | 0.415785 | 5.2:-79975798 | MS.gene81375:CDS |
| GTATGGTGTGTTGGCAGCTT+GGG | 0.431514 | 5.2:-79975806 | MS.gene81375:CDS |
| GGAAAAGTCTTTGTAGGTGC+AGG | 0.431649 | 5.2:-79975923 | MS.gene81375:CDS |
| AGCCGGTGGAAGAGTGAAAC+TGG | 0.434903 | 5.2:-79973720 | MS.gene81375:CDS |
| TGTATGGTGTGTTGGCAGCT+TGG | 0.438917 | 5.2:-79975807 | MS.gene81375:CDS |
| TCGTCCTCGTTATCTTCAAA+AGG | 0.448253 | 5.2:+79975324 | None:intergenic |
| CGCTAGAAAGCCCAGGAAAA+CGG | 0.451250 | 5.2:-79974363 | MS.gene81375:CDS |
| TCATCTTGATTTATTGGTAA+AGG | 0.453360 | 5.2:+79975252 | None:intergenic |
| AAGAAAGGAAAAGTCTTTGT+AGG | 0.456968 | 5.2:-79975929 | MS.gene81375:CDS |
| GACTTGTCTTCAAGATTGTT+AGG | 0.457224 | 5.2:+79976775 | None:intergenic |
| CTGCTGTGTGTATGGTGTGT+TGG | 0.465863 | 5.2:-79975815 | MS.gene81375:CDS |
| GCCAAGTTCATCAGCGGCAC+TGG | 0.467989 | 5.2:-79973582 | MS.gene81375:CDS |
| GGTTAAAATTGGAGAATTGG+AGG | 0.470375 | 5.2:-79976164 | MS.gene81375:CDS |
| TTCCAGTTTCACTCTTCCAC+CGG | 0.474751 | 5.2:+79973718 | None:intergenic |
| ATGCAACCCAAAACTGAACC+TGG | 0.476085 | 5.2:-79976826 | MS.gene81375:CDS |
| GGTTGAAATTAAGAATTTGA+AGG | 0.477261 | 5.2:-79976413 | MS.gene81375:CDS |
| GGCTTTGTGGAATTGGAACC+TGG | 0.477680 | 5.2:+79976796 | None:intergenic |
| GATGCTCAAGGTTCATCATC+AGG | 0.480745 | 5.2:-79975174 | MS.gene81375:intron |
| AAAGAAGAACAATGAATTGG+AGG | 0.488189 | 5.2:-79976434 | MS.gene81375:CDS |
| GCCAGTGCCGCTGATGAACT+TGG | 0.489599 | 5.2:+79973581 | None:intergenic |
| TTTGACCGTGTCAACTGCAT+TGG | 0.491729 | 5.2:+79973535 | None:intergenic |
| CATCGTCGTCGTCGTCATCA+AGG | 0.492320 | 5.2:+79973675 | None:intergenic |
| GGCTTAGATGCCTCTATTGG+TGG | 0.497178 | 5.2:-79975429 | MS.gene81375:intron |
| GCTTAGAGAGGAGTTTCACT+TGG | 0.499506 | 5.2:-79976608 | MS.gene81375:CDS |
| TGTGAGTTTAGTTCTGCTGC+TGG | 0.501990 | 5.2:-79975851 | MS.gene81375:CDS |
| TTCACTTGGAGAGACTTTCA+AGG | 0.504313 | 5.2:-79976594 | MS.gene81375:CDS |
| AGAAGTGGAGGTGGAAGTGG+AGG | 0.504345 | 5.2:+79973484 | None:intergenic |
| GCATCCTTGATCCCTTTGCT+CGG | 0.504608 | 5.2:+79975192 | None:intergenic |
| TCCACTTCTACTTCCTCCGA+TGG | 0.506545 | 5.2:-79973470 | MS.gene81375:CDS |
| GTACTCAGCCACCGAGCAAA+GGG | 0.506601 | 5.2:-79975203 | MS.gene81375:CDS |
| TTTCTGCAGGTGAAGAGTGT+TGG | 0.516504 | 5.2:-79974394 | MS.gene81375:intron |
| ACTACGTGGAACTTGTCAAT+GGG | 0.522509 | 5.2:-79976731 | MS.gene81375:CDS |
| TACTACGTGGAACTTGTCAA+TGG | 0.523079 | 5.2:-79976732 | MS.gene81375:CDS |
| GCCACCGAGCAAAGGGATCA+AGG | 0.523956 | 5.2:-79975196 | MS.gene81375:CDS |
| TGTTTGCTGCTATCTGCCAT+CGG | 0.524093 | 5.2:-79975896 | MS.gene81375:CDS |
| GAGGAAGATGACATTGAATT+GGG | 0.529053 | 5.2:-79976289 | MS.gene81375:CDS |
| CATGTCTCGATAATCTTACA+AGG | 0.529060 | 5.2:-79973445 | MS.gene81375:CDS |
| GGAGGAAGTAGAAGTGGAGG+TGG | 0.539101 | 5.2:+79973475 | None:intergenic |
| TCTATTGGTGGCAACAATGA+GGG | 0.540187 | 5.2:-79975417 | MS.gene81375:CDS |
| TCCTCGCTCTCTTCAGAACT+AGG | 0.540500 | 5.2:+79975369 | None:intergenic |
| TCTTCAGAACTAGGAACCAC+TGG | 0.540888 | 5.2:+79975378 | None:intergenic |
| CTCTATTGGTGGCAACAATG+AGG | 0.543509 | 5.2:-79975418 | MS.gene81375:CDS |
| TTGGAACCTGGTGGTGACCC+AGG | 0.547983 | 5.2:+79976808 | None:intergenic |
| GACTGGTGAATTAGAGAGCA+AGG | 0.550435 | 5.2:-79976251 | MS.gene81375:CDS |
| GGAGAGATTAAAGCTTAGAG+AGG | 0.551503 | 5.2:-79976620 | MS.gene81375:CDS |
| TCACTTGGAGAGACTTTCAA+GGG | 0.554056 | 5.2:-79976593 | MS.gene81375:CDS |
| TTTGGAGTTGACGAAGTCAA+AGG | 0.554284 | 5.2:-79976227 | MS.gene81375:CDS |
| AGTACTCAGCCACCGAGCAA+AGG | 0.557499 | 5.2:-79975204 | MS.gene81375:CDS |
| GATAACGAGGACGAGAATGC+TGG | 0.561580 | 5.2:-79975315 | MS.gene81375:CDS |
| CGAGGAAGAGCGTGTTCCAG+TGG | 0.561622 | 5.2:-79975352 | MS.gene81375:CDS |
| GGAGCCTTCTGCTGATCCAG+TGG | 0.561757 | 5.2:-79975394 | MS.gene81375:CDS |
| CAAAGCCTCAAGTAATGTCT+CGG | 0.571102 | 5.2:+79976063 | None:intergenic |
| GTTGAGATTACAGGGTCTTG+TGG | 0.573376 | 5.2:-79974341 | MS.gene81375:CDS |
| GATGATCAATCTATGTCTCA+AGG | 0.574541 | 5.2:-79973653 | MS.gene81375:CDS |
| TGACGAAGTCAAAGGAAAAG+TGG | 0.576702 | 5.2:-79976219 | MS.gene81375:CDS |
| ACTGAACCTGGGTCACCACC+AGG | 0.584855 | 5.2:-79976814 | MS.gene81375:CDS |
| TCTTCAAAAGGATCAACCAC+TGG | 0.592139 | 5.2:+79975336 | None:intergenic |
| TCCTTGATCCCTTTGCTCGG+TGG | 0.592940 | 5.2:+79975195 | None:intergenic |
| GTCTACTGCTAAGCAGCCGA+TGG | 0.595886 | 5.2:+79975880 | None:intergenic |
| ACCATCGGAGGAAGTAGAAG+TGG | 0.600712 | 5.2:+79973469 | None:intergenic |
| GAGATTACAGGGTCTTGTGG+AGG | 0.601325 | 5.2:-79974338 | MS.gene81375:intron |
| TGGCAACGATGAGTGAGTTG+AGG | 0.602280 | 5.2:-79976123 | MS.gene81375:CDS |
| CTATTGGTGGCAACAATGAG+GGG | 0.607900 | 5.2:-79975416 | MS.gene81375:CDS |
| CATTACTTGAGGCTTTGAAG+AGG | 0.609257 | 5.2:-79976057 | MS.gene81375:CDS |
| CATAAATGACATTGTTGACG+AGG | 0.611921 | 5.2:-79975280 | MS.gene81375:CDS |
| TGGTATACGCTAGAAAGCCC+AGG | 0.612521 | 5.2:-79974370 | MS.gene81375:CDS |
| ATTTGCCAATGCAGTTGACA+CGG | 0.617434 | 5.2:-79973540 | MS.gene81375:CDS |
| TCCTAGTTCTGAAGAGAGCG+AGG | 0.618367 | 5.2:-79975370 | MS.gene81375:CDS |
| TGAAAGCAGCAAATTGGCAG+AGG | 0.619230 | 5.2:-79976098 | MS.gene81375:CDS |
| TGCAACCCAAAACTGAACCT+GGG | 0.623349 | 5.2:-79976825 | MS.gene81375:CDS |
| GGAAAACGGTTGAGATTACA+GGG | 0.627772 | 5.2:-79974349 | MS.gene81375:CDS |
| AAAGGGATCAAGGATGCTCA+AGG | 0.628139 | 5.2:-79975186 | MS.gene81375:CDS |
| CGAAGCCGAGACATTACTTG+AGG | 0.631250 | 5.2:-79976068 | MS.gene81375:CDS |
| TGCAGGTGAAGAGTGTTGGA+TGG | 0.633165 | 5.2:-79974390 | MS.gene81375:intron |
| GTCTGAATTTAAGAAAAGAG+AGG | 0.635967 | 5.2:-79976560 | MS.gene81375:CDS |
| ATTATCGAGACATGAACCAT+CGG | 0.637556 | 5.2:+79973454 | None:intergenic |
| GGAACCACTGGATCAGCAGA+AGG | 0.640019 | 5.2:+79975390 | None:intergenic |
| ATCGGAGGAAGTAGAAGTGG+AGG | 0.645940 | 5.2:+79973472 | None:intergenic |
| CAGAACTAAACTCACAGACA+AGG | 0.649758 | 5.2:+79975858 | None:intergenic |
| TGAAGAGCCAAGTTCATCAG+CGG | 0.677802 | 5.2:-79973588 | MS.gene81375:CDS |
| GAGGGATATGAGACTCAGAG+AGG | 0.679885 | 5.2:-79976674 | MS.gene81375:CDS |
| TATTGGTGGCAACAATGAGG+GGG | 0.686512 | 5.2:-79975415 | MS.gene81375:CDS |
| ATCGAGACATGAACCATCGG+AGG | 0.699092 | 5.2:+79973457 | None:intergenic |
| GATCTTGTTATGGTACTACG+TGG | 0.742209 | 5.2:-79976745 | MS.gene81375:CDS |
| TTTGTGGAATTGGAACCTGG+TGG | 0.802029 | 5.2:+79976799 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATTTTCAATAACATAT+AGG | + | chr5.2:79974595-79974614 | None:intergenic | 10.0% |
| !! | AAACAAAAACTTGAAAAATA+AGG | + | chr5.2:79976443-79976462 | None:intergenic | 15.0% |
| !! | AAAGAAGATTAAGAAAAAAT+GGG | - | chr5.2:79973933-79973952 | MS.gene81375:intron | 15.0% |
| !! | AATAATTCATAGTTATTAAG+GGG | - | chr5.2:79975963-79975982 | MS.gene81375:intron | 15.0% |
| !! | GAATAATTCATAGTTATTAA+GGG | - | chr5.2:79975962-79975981 | MS.gene81375:intron | 15.0% |
| !! | TAAAGAAGATTAAGAAAAAA+TGG | - | chr5.2:79973932-79973951 | MS.gene81375:intron | 15.0% |
| !!! | AAATATAGTGAAAATGTTTT+TGG | - | chr5.2:79976043-79976062 | MS.gene81375:CDS | 15.0% |
| !! | AAAACTTGAAAAATAAGGTA+TGG | + | chr5.2:79976438-79976457 | None:intergenic | 20.0% |
| !! | AAATAATTAAATTCCAAGCA+TGG | + | chr5.2:79974711-79974730 | None:intergenic | 20.0% |
| !! | AATAATTAAATTCCAAGCAT+GGG | + | chr5.2:79974710-79974729 | None:intergenic | 20.0% |
| !! | AATTAAACTTCTATCAAAAG+AGG | + | chr5.2:79975435-79975454 | None:intergenic | 20.0% |
| !! | ACCAGGATATTATATTATTA+TGG | - | chr5.2:79975335-79975354 | MS.gene81375:CDS | 20.0% |
| !! | CCAGGATATTATATTATTAT+GGG | - | chr5.2:79975336-79975355 | MS.gene81375:CDS | 20.0% |
| !! | GGAATAATTCATAGTTATTA+AGG | - | chr5.2:79975961-79975980 | MS.gene81375:intron | 20.0% |
| !! | TAATGATCATCTTGATTTAT+TGG | + | chr5.2:79975001-79975020 | None:intergenic | 20.0% |
| !! | TTCAAAGTACAAACAATAAA+TGG | + | chr5.2:79975681-79975700 | None:intergenic | 20.0% |
| !!! | AAATGTATTTTGTTTTTCCT+AGG | - | chr5.2:79976261-79976280 | MS.gene81375:CDS | 20.0% |
| ! | AACAAAGATTGTTGAATTAG+AGG | - | chr5.2:79973894-79973913 | MS.gene81375:intron | 25.0% |
| ! | AAGTTATATAATATCCAGAG+AGG | + | chr5.2:79975362-79975381 | None:intergenic | 25.0% |
| ! | AATGAAAAACACACAAAATC+AGG | - | chr5.2:79976237-79976256 | MS.gene81375:CDS | 25.0% |
| ! | ATCTATATAGGAATAAGAGA+TGG | + | chr5.2:79975114-79975133 | None:intergenic | 25.0% |
| ! | CCCATAATAATATAATATCC+TGG | + | chr5.2:79975339-79975358 | None:intergenic | 25.0% |
| ! | CTGTTATTGTATGTTGTTAT+GGG | - | chr5.2:79974563-79974582 | MS.gene81375:intron | 25.0% |
| ! | GGTTGAAATTAAGAATTTGA+AGG | - | chr5.2:79973831-79973850 | MS.gene81375:intron | 25.0% |
| ! | TAAGGTTAAAATTGGAGAAT+TGG | - | chr5.2:79974077-79974096 | MS.gene81375:intron | 25.0% |
| ! | TATCAGATAATATATACAGC+AGG | + | chr5.2:79976306-79976325 | None:intergenic | 25.0% |
| ! | TCAGAAATGCATATCTATAT+AGG | + | chr5.2:79975126-79975145 | None:intergenic | 25.0% |
| ! | TCATCTTGATTTATTGGTAA+AGG | + | chr5.2:79974995-79975014 | None:intergenic | 25.0% |
| ! | TCTGTTATTGTATGTTGTTA+TGG | - | chr5.2:79974562-79974581 | MS.gene81375:intron | 25.0% |
| ! | TGAAAAGAAGAACAATGAAT+TGG | - | chr5.2:79973807-79973826 | MS.gene81375:intron | 25.0% |
| ! | TTGAATTCAATATGTGTGAT+TGG | - | chr5.2:79975163-79975182 | MS.gene81375:intron | 25.0% |
| !! | AAATTATGATGACTAGCTAA+TGG | + | chr5.2:79975275-79975294 | None:intergenic | 25.0% |
| !! | AGGGTTATTAGAGTAAATTT+TGG | + | chr5.2:79974648-79974667 | None:intergenic | 25.0% |
| !! | GGGTTATTAGAGTAAATTTT+GGG | + | chr5.2:79974647-79974666 | None:intergenic | 25.0% |
| !! | TGCTTAAACATATCTCTTTT+TGG | - | chr5.2:79976498-79976517 | MS.gene81375:CDS | 25.0% |
| !!! | CATTTAAAGAAAGCTAGTTT+TGG | - | chr5.2:79976618-79976637 | MS.gene81375:CDS | 25.0% |
| AAAGAAGAACAATGAATTGG+AGG | - | chr5.2:79973810-79973829 | MS.gene81375:intron | 30.0% | |
| AACAACATACAATAACAGAG+TGG | + | chr5.2:79974561-79974580 | None:intergenic | 30.0% | |
| AAGAAAGGAAAAGTCTTTGT+AGG | - | chr5.2:79974315-79974334 | MS.gene81375:intron | 30.0% | |
| AATAAAGATGAACCTTAGAG+AGG | + | chr5.2:79975477-79975496 | None:intergenic | 30.0% | |
| AATTATCCCATATCAAGTGT+TGG | + | chr5.2:79975765-79975784 | None:intergenic | 30.0% | |
| AATTCATAGTTATTAAGGGG+AGG | - | chr5.2:79975966-79975985 | MS.gene81375:intron | 30.0% | |
| ACCAAATTAACCTAATATCC+CGG | + | chr5.2:79975412-79975431 | None:intergenic | 30.0% | |
| ATATACTCCAACACTTGATA+TGG | - | chr5.2:79975755-79975774 | MS.gene81375:intron | 30.0% | |
| CTAAAAAAATCAGCTTGGTT+TGG | + | chr5.2:79974287-79974306 | None:intergenic | 30.0% | |
| GAAGATTAAGAAAAAATGGG+AGG | - | chr5.2:79973936-79973955 | MS.gene81375:intron | 30.0% | |
| GCTAGATGATAAAAATGCTT+TGG | - | chr5.2:79974047-79974066 | MS.gene81375:intron | 30.0% | |
| GGTGAATTAAGAAAAATGAC+TGG | - | chr5.2:79973976-79973995 | MS.gene81375:intron | 30.0% | |
| GTCTATTCATGATCTTGTTA+TGG | - | chr5.2:79973489-79973508 | MS.gene81375:CDS | 30.0% | |
| GTCTGAATTTAAGAAAAGAG+AGG | - | chr5.2:79973684-79973703 | MS.gene81375:CDS | 30.0% | |
| TAGATAAACTCAATTAGCAC+CGG | - | chr5.2:79975390-79975409 | MS.gene81375:CDS | 30.0% | |
| TATACTCCAACACTTGATAT+GGG | - | chr5.2:79975756-79975775 | MS.gene81375:intron | 30.0% | |
| TCAATTACTTGAAGATCCAA+TGG | - | chr5.2:79976352-79976371 | MS.gene81375:CDS | 30.0% | |
| TGTGTGATTGGATAAATGTT+TGG | - | chr5.2:79975175-79975194 | MS.gene81375:CDS | 30.0% | |
| ! | AATGCTACTTACATTTCCTT+AGG | + | chr5.2:79975553-79975572 | None:intergenic | 30.0% |
| ! | GATGATAAAAATGCTTTGGA+TGG | - | chr5.2:79974051-79974070 | MS.gene81375:intron | 30.0% |
| ! | GATGGACTTAAGGTTAAAAT+TGG | - | chr5.2:79974069-79974088 | MS.gene81375:intron | 30.0% |
| !! | AGCTCTTTTGAAAGAAGTTA+AGG | - | chr5.2:79973747-79973766 | MS.gene81375:intron | 30.0% |
| !! | AGTTCCTTTTCTTGTTGTAT+GGG | - | chr5.2:79974518-79974537 | MS.gene81375:intron | 30.0% |
| !! | TAGTTCCTTTTCTTGTTGTA+TGG | - | chr5.2:79974517-79974536 | MS.gene81375:intron | 30.0% |
| !!! | CAAACCAAGCTGATTTTTTT+AGG | - | chr5.2:79974285-79974304 | MS.gene81375:intron | 30.0% |
| !!! | CAAGTGGATAAACTGTTTTT+TGG | - | chr5.2:79976088-79976107 | MS.gene81375:CDS | 30.0% |
| !!! | TGTTTTTGGATTATCTGTTG+AGG | - | chr5.2:79976057-79976076 | MS.gene81375:CDS | 30.0% |
| !!! | TTTTTTAGAGCATTTTCTGC+AGG | - | chr5.2:79975837-79975856 | MS.gene81375:CDS | 30.0% |
| AAGGTTCATCATCAGGTATA+TGG | - | chr5.2:79975077-79975096 | MS.gene81375:intron | 35.0% | |
| ACCGGGATATTAGGTTAATT+TGG | - | chr5.2:79975408-79975427 | MS.gene81375:CDS | 35.0% | |
| AGAGAGGAAATTTGTGAGAA+AGG | - | chr5.2:79973700-79973719 | MS.gene81375:CDS | 35.0% | |
| AGATAAACTCAATTAGCACC+GGG | - | chr5.2:79975391-79975410 | MS.gene81375:CDS | 35.0% | |
| ATCGTCAGATAACTTGAATC+AGG | + | chr5.2:79974668-79974687 | None:intergenic | 35.0% | |
| ATTATCGAGACATGAACCAT+CGG | + | chr5.2:79976793-79976812 | None:intergenic | 35.0% | |
| ATTGTATGTTGTTATGGGCT+TGG | - | chr5.2:79974568-79974587 | MS.gene81375:intron | 35.0% | |
| CAAGATGATCATTACACTCT+TGG | - | chr5.2:79975007-79975026 | MS.gene81375:intron | 35.0% | |
| CATAAATGACATTGTTGACG+AGG | - | chr5.2:79974964-79974983 | MS.gene81375:intron | 35.0% | |
| CATGTCTCGATAATCTTACA+AGG | - | chr5.2:79976799-79976818 | MS.gene81375:CDS | 35.0% | |
| GACTTGTCTTCAAGATTGTT+AGG | + | chr5.2:79973472-79973491 | None:intergenic | 35.0% | |
| GAGAGGAAATTTGTGAGAAA+GGG | - | chr5.2:79973701-79973720 | MS.gene81375:CDS | 35.0% | |
| GAGGAAGATGACATTGAATT+GGG | - | chr5.2:79973955-79973974 | MS.gene81375:intron | 35.0% | |
| GATGATCAATCTATGTCTCA+AGG | - | chr5.2:79976591-79976610 | MS.gene81375:CDS | 35.0% | |
| GGAGACAGTAAAGAAGAATT+TGG | - | chr5.2:79974101-79974120 | MS.gene81375:intron | 35.0% | |
| GGAGGTTTATTAGAGAATAG+AGG | - | chr5.2:79975984-79976003 | MS.gene81375:intron | 35.0% | |
| GGTTAAAATTGGAGAATTGG+AGG | - | chr5.2:79974080-79974099 | MS.gene81375:intron | 35.0% | |
| TATATTATTATGGGCCTCTC+TGG | - | chr5.2:79975345-79975364 | MS.gene81375:CDS | 35.0% | |
| TCGAAAGAAAACTTCCTCAA+GGG | + | chr5.2:79976208-79976227 | None:intergenic | 35.0% | |
| TCGTCAGATAACTTGAATCA+GGG | + | chr5.2:79974667-79974686 | None:intergenic | 35.0% | |
| TGCACCTAAAAAAATCAGCT+TGG | + | chr5.2:79974292-79974311 | None:intergenic | 35.0% | |
| TTCAAGATTGTTAGGCTTTG+TGG | + | chr5.2:79973464-79973483 | None:intergenic | 35.0% | |
| TTCGAAAGAAAACTTCCTCA+AGG | + | chr5.2:79976209-79976228 | None:intergenic | 35.0% | |
| TTGGAGTATATCTCTACAAG+AGG | + | chr5.2:79975746-79975765 | None:intergenic | 35.0% | |
| TTGGATTATCTGTTGAGGTT+TGG | - | chr5.2:79976062-79976081 | MS.gene81375:CDS | 35.0% | |
| TTGTATGTTGTTATGGGCTT+GGG | - | chr5.2:79974569-79974588 | MS.gene81375:intron | 35.0% | |
| ! | AAATGCTTTGGATGGACTTA+AGG | - | chr5.2:79974059-79974078 | MS.gene81375:intron | 35.0% |
| ! | ATTGTTAGGCTTTGTGGAAT+TGG | + | chr5.2:79973458-79973477 | None:intergenic | 35.0% |
| ! | GAAGATCTCATTCTTTTGTC+GGG | - | chr5.2:79974794-79974813 | MS.gene81375:intron | 35.0% |
| ! | GGAAGATCTCATTCTTTTGT+CGG | - | chr5.2:79974793-79974812 | MS.gene81375:intron | 35.0% |
| ! | TGAATTAGAGAGCAAGGTTT+TGG | - | chr5.2:79973999-79974018 | MS.gene81375:intron | 35.0% |
| !! | GAAATGTAAGTAGCATTGAC+AGG | - | chr5.2:79975556-79975575 | MS.gene81375:intron | 35.0% |
| !! | GTTCCTTTTCTTGTTGTATG+GGG | - | chr5.2:79974519-79974538 | MS.gene81375:intron | 35.0% |
| !! | GTTGCAACAAAGCTTTGAAA+TGG | - | chr5.2:79973603-79973622 | MS.gene81375:CDS | 35.0% |
| !! | TGATAGTGTTGAAGCTGTTT+TGG | - | chr5.2:79973543-79973562 | MS.gene81375:CDS | 35.0% |
| !! | TGATCCTTTTGAAGATAACG+AGG | - | chr5.2:79974916-79974935 | MS.gene81375:intron | 35.0% |
| !! | TGCTCTAAAAAACTGTCTGA+AGG | + | chr5.2:79975829-79975848 | None:intergenic | 35.0% |
| !! | TTCCTTTTCTTGTTGTATGG+GGG | - | chr5.2:79974520-79974539 | MS.gene81375:intron | 35.0% |
| !!! | AAGCTGATTTTTTTAGGTGC+AGG | - | chr5.2:79974291-79974310 | MS.gene81375:intron | 35.0% |
| !!! | TTTTTAGGTGCAGGTAAGAA+AGG | - | chr5.2:79974300-79974319 | MS.gene81375:intron | 35.0% |
| AAGTTGTGCCTCACCAATAT+TGG | - | chr5.2:79974737-79974756 | MS.gene81375:intron | 40.0% | |
| ACTACGTGGAACTTGTCAAT+GGG | - | chr5.2:79973513-79973532 | MS.gene81375:CDS | 40.0% | |
| AGGAAAACGGTTGAGATTAC+AGG | - | chr5.2:79975894-79975913 | MS.gene81375:CDS | 40.0% | |
| AGTTGTGCCTCACCAATATT+GGG | - | chr5.2:79974738-79974757 | MS.gene81375:intron | 40.0% | |
| ATTTGCCAATGCAGTTGACA+CGG | - | chr5.2:79976704-79976723 | MS.gene81375:CDS | 40.0% | |
| CAAAGCCTCAAGTAATGTCT+CGG | + | chr5.2:79974184-79974203 | None:intergenic | 40.0% | |
| CAATCACTAGTTGAGCATAC+TGG | + | chr5.2:79975202-79975221 | None:intergenic | 40.0% | |
| CAGAACTAAACTCACAGACA+AGG | + | chr5.2:79974389-79974408 | None:intergenic | 40.0% | |
| CGCTGTAATCATGTTTACCT+AGG | + | chr5.2:79976281-79976300 | None:intergenic | 40.0% | |
| GAGGAATGAAAGCAGCAAAT+TGG | - | chr5.2:79974140-79974159 | MS.gene81375:intron | 40.0% | |
| GGAAAACGGTTGAGATTACA+GGG | - | chr5.2:79975895-79975914 | MS.gene81375:CDS | 40.0% | |
| GGAGAGATTAAAGCTTAGAG+AGG | - | chr5.2:79973624-79973643 | MS.gene81375:CDS | 40.0% | |
| GGAGGAAGATGACATTGAAT+TGG | - | chr5.2:79973954-79973973 | MS.gene81375:intron | 40.0% | |
| GTACATACTCAATTAGCACC+AGG | - | chr5.2:79975318-79975337 | MS.gene81375:CDS | 40.0% | |
| GTTATTCAGTAGCATGCAGA+AGG | - | chr5.2:79975932-79975951 | MS.gene81375:CDS | 40.0% | |
| TACTACGTGGAACTTGTCAA+TGG | - | chr5.2:79973512-79973531 | MS.gene81375:CDS | 40.0% | |
| TATCTGACGATTGTTGCAAG+CGG | - | chr5.2:79974677-79974696 | MS.gene81375:intron | 40.0% | |
| TCACTTGGAGAGACTTTCAA+GGG | - | chr5.2:79973651-79973670 | MS.gene81375:CDS | 40.0% | |
| TCGTCCTCGTTATCTTCAAA+AGG | + | chr5.2:79974923-79974942 | None:intergenic | 40.0% | |
| TCTTCAAAAGGATCAACCAC+TGG | + | chr5.2:79974911-79974930 | None:intergenic | 40.0% | |
| TGACGAAGTCAAAGGAAAAG+TGG | - | chr5.2:79974025-79974044 | MS.gene81375:intron | 40.0% | |
| TTACTTGAAGATCCAATGGC+TGG | - | chr5.2:79976356-79976375 | MS.gene81375:CDS | 40.0% | |
| TTCAAGGAAAATCCAGCCAT+TGG | + | chr5.2:79976371-79976390 | None:intergenic | 40.0% | |
| TTCACTTGGAGAGACTTTCA+AGG | - | chr5.2:79973650-79973669 | MS.gene81375:CDS | 40.0% | |
| TTGAAGCTTCTTCCTCTCTA+AGG | - | chr5.2:79975462-79975481 | MS.gene81375:intron | 40.0% | |
| ! | AGCTGGATCTGATTTTCCTA+AGG | - | chr5.2:79975534-79975553 | MS.gene81375:intron | 40.0% |
| ! | ATATCTCTTTTTGGACCAGC+CGG | - | chr5.2:79976507-79976526 | MS.gene81375:CDS | 40.0% |
| ! | GATCTTGTTATGGTACTACG+TGG | - | chr5.2:79973499-79973518 | MS.gene81375:CDS | 40.0% |
| ! | GGATTTTCCTTGAAATGCTG+AGG | - | chr5.2:79976377-79976396 | MS.gene81375:CDS | 40.0% |
| ! | GTAATCTCAACCGTTTTCCT+GGG | + | chr5.2:79975894-79975913 | None:intergenic | 40.0% |
| ! | TCAATTAGCACCGGGATATT+AGG | - | chr5.2:79975399-79975418 | MS.gene81375:CDS | 40.0% |
| ! | TCTATTGGTGGCAACAATGA+GGG | - | chr5.2:79974827-79974846 | MS.gene81375:intron | 40.0% |
| ! | TGTAATCTCAACCGTTTTCC+TGG | + | chr5.2:79975895-79975914 | None:intergenic | 40.0% |
| ! | TTTGGAGTTGACGAAGTCAA+AGG | - | chr5.2:79974017-79974036 | MS.gene81375:intron | 40.0% |
| !! | AAAATCAGCTTGGTTTGGTG+TGG | + | chr5.2:79974282-79974301 | None:intergenic | 40.0% |
| !! | CATTACTTGAGGCTTTGAAG+AGG | - | chr5.2:79974187-79974206 | MS.gene81375:intron | 40.0% |
| !! | TCCTTTTCTTGTTGTATGGG+GGG | - | chr5.2:79974521-79974540 | MS.gene81375:intron | 40.0% |
| !!! | TGAAGCTGTTTTGGAGAAGA+GGG | - | chr5.2:79973552-79973571 | MS.gene81375:CDS | 40.0% |
| !!! | TTGAAGCTGTTTTGGAGAAG+AGG | - | chr5.2:79973551-79973570 | MS.gene81375:CDS | 40.0% |
| AAAGGGATCAAGGATGCTCA+AGG | - | chr5.2:79975058-79975077 | MS.gene81375:intron | 45.0% | |
| ACCCCCCATACAACAAGAAA+AGG | + | chr5.2:79974525-79974544 | None:intergenic | 45.0% | |
| ATGCAACCCAAAACTGAACC+TGG | - | chr5.2:79973418-79973437 | MS.gene81375:CDS | 45.0% | |
| CGTGAAAGAGTAACAACCAG+GGG | - | chr5.2:79974225-79974244 | MS.gene81375:intron | 45.0% | |
| CTAGTAGCCTCAGCATTTCA+AGG | + | chr5.2:79976387-79976406 | None:intergenic | 45.0% | |
| CTCATTGTTGCCACCAATAG+AGG | + | chr5.2:79974828-79974847 | None:intergenic | 45.0% | |
| GAAAACTTCCTCAAGGGATG+AGG | + | chr5.2:79976202-79976221 | None:intergenic | 45.0% | |
| GACTGGTGAATTAGAGAGCA+AGG | - | chr5.2:79973993-79974012 | MS.gene81375:intron | 45.0% | |
| GATGCTCAAGGTTCATCATC+AGG | - | chr5.2:79975070-79975089 | MS.gene81375:intron | 45.0% | |
| GATTTCTTCCTCATCCCTTG+AGG | - | chr5.2:79976191-79976210 | MS.gene81375:CDS | 45.0% | |
| GCGTGAAAGAGTAACAACCA+GGG | - | chr5.2:79974224-79974243 | MS.gene81375:intron | 45.0% | |
| GCTTAGAGAGGAGTTTCACT+TGG | - | chr5.2:79973636-79973655 | MS.gene81375:CDS | 45.0% | |
| GGAAAAGTCTTTGTAGGTGC+AGG | - | chr5.2:79974321-79974340 | MS.gene81375:intron | 45.0% | |
| GTTGAGATTACAGGGTCTTG+TGG | - | chr5.2:79975903-79975922 | MS.gene81375:CDS | 45.0% | |
| TCTTCAGAACTAGGAACCAC+TGG | + | chr5.2:79974869-79974888 | None:intergenic | 45.0% | |
| TGAAAGCAGCAAATTGGCAG+AGG | - | chr5.2:79974146-79974165 | MS.gene81375:intron | 45.0% | |
| TGAAGAGCCAAGTTCATCAG+CGG | - | chr5.2:79976656-79976675 | MS.gene81375:CDS | 45.0% | |
| TGCAACCCAAAACTGAACCT+GGG | - | chr5.2:79973419-79973438 | MS.gene81375:CDS | 45.0% | |
| TGCGTGAAAGAGTAACAACC+AGG | - | chr5.2:79974223-79974242 | MS.gene81375:intron | 45.0% | |
| TTCCAGTTTCACTCTTCCAC+CGG | + | chr5.2:79976529-79976548 | None:intergenic | 45.0% | |
| TTCCTCCAACGTTGTTACCA+GGG | + | chr5.2:79974777-79974796 | None:intergenic | 45.0% | |
| TTTGACCGTGTCAACTGCAT+TGG | + | chr5.2:79976712-79976731 | None:intergenic | 45.0% | |
| TTTGTGGAATTGGAACCTGG+TGG | + | chr5.2:79973448-79973467 | None:intergenic | 45.0% | |
| ! | CTATTGGTGGCAACAATGAG+GGG | - | chr5.2:79974828-79974847 | MS.gene81375:intron | 45.0% |
| ! | CTCTATTGGTGGCAACAATG+AGG | - | chr5.2:79974826-79974845 | MS.gene81375:intron | 45.0% |
| ! | TATTGGTGGCAACAATGAGG+GGG | - | chr5.2:79974829-79974848 | MS.gene81375:intron | 45.0% |
| ! | TGTTGAGGTTTGGTAGCAAG+TGG | - | chr5.2:79976072-79976091 | MS.gene81375:CDS | 45.0% |
| ! | TGTTTGCTGCTATCTGCCAT+CGG | - | chr5.2:79974348-79974367 | MS.gene81375:CDS | 45.0% |
| ! | TTTCTGCAGGTGAAGAGTGT+TGG | - | chr5.2:79975850-79975869 | MS.gene81375:CDS | 45.0% |
| !! | AGTAGCATTGACAGGAACTG+TGG | - | chr5.2:79975564-79975583 | MS.gene81375:intron | 45.0% |
| !! | TGTGAGTTTAGTTCTGCTGC+TGG | - | chr5.2:79974393-79974412 | MS.gene81375:intron | 45.0% |
| !! | TTTTGGTGTATGACCTGCTG+CGG | - | chr5.2:79974470-79974489 | MS.gene81375:intron | 45.0% |
| ACCATCGGAGGAAGTAGAAG+TGG | + | chr5.2:79976778-79976797 | None:intergenic | 50.0% | |
| AGCGGTAGTTAACCCATGCT+TGG | - | chr5.2:79974695-79974714 | MS.gene81375:intron | 50.0% | |
| AGTAGAAGTGGAGGTGGAAG+TGG | + | chr5.2:79976766-79976785 | None:intergenic | 50.0% | |
| ATCGAGACATGAACCATCGG+AGG | + | chr5.2:79976790-79976809 | None:intergenic | 50.0% | |
| ATCGGAGGAAGTAGAAGTGG+AGG | + | chr5.2:79976775-79976794 | None:intergenic | 50.0% | |
| CGAAGCCGAGACATTACTTG+AGG | - | chr5.2:79974176-79974195 | MS.gene81375:intron | 50.0% | |
| CGCTAGAAAGCCCAGGAAAA+CGG | - | chr5.2:79975881-79975900 | MS.gene81375:CDS | 50.0% | |
| CTCACCAATATTGGGAGTCC+AGG | - | chr5.2:79974746-79974765 | MS.gene81375:intron | 50.0% | |
| CTGCTGTGTGTATGGTGTGT+TGG | - | chr5.2:79974429-79974448 | MS.gene81375:intron | 50.0% | |
| CTGGACTCCCAATATTGGTG+AGG | + | chr5.2:79974748-79974767 | None:intergenic | 50.0% | |
| CTTCCTCCAACGTTGTTACC+AGG | + | chr5.2:79974778-79974797 | None:intergenic | 50.0% | |
| GAAAGAGTAACAACCAGGGG+CGG | - | chr5.2:79974228-79974247 | MS.gene81375:intron | 50.0% | |
| GAGGGATATGAGACTCAGAG+AGG | - | chr5.2:79973570-79973589 | MS.gene81375:CDS | 50.0% | |
| GATAACGAGGACGAGAATGC+TGG | - | chr5.2:79974929-79974948 | MS.gene81375:intron | 50.0% | |
| GCATCCTTGATCCCTTTGCT+CGG | + | chr5.2:79975055-79975074 | None:intergenic | 50.0% | |
| GGCTTAGATGCCTCTATTGG+TGG | - | chr5.2:79974815-79974834 | MS.gene81375:intron | 50.0% | |
| TCCACTTCTACTTCCTCCGA+TGG | - | chr5.2:79976774-79976793 | MS.gene81375:CDS | 50.0% | |
| TCCTCCAACGTTGTTACCAG+GGG | + | chr5.2:79974776-79974795 | None:intergenic | 50.0% | |
| TCCTCGCTCTCTTCAGAACT+AGG | + | chr5.2:79974878-79974897 | None:intergenic | 50.0% | |
| TCGGGCTTAGATGCCTCTAT+TGG | - | chr5.2:79974812-79974831 | MS.gene81375:intron | 50.0% | |
| TGGCAACGATGAGTGAGTTG+AGG | - | chr5.2:79974121-79974140 | MS.gene81375:intron | 50.0% | |
| TGGTATACGCTAGAAAGCCC+AGG | - | chr5.2:79975874-79975893 | MS.gene81375:CDS | 50.0% | |
| ! | AAGCTCTTGGCTCTCATAGC+TGG | - | chr5.2:79975517-79975536 | MS.gene81375:intron | 50.0% |
| ! | ATGAGAGCCAAGAGCTTGCT+TGG | + | chr5.2:79975514-79975533 | None:intergenic | 50.0% |
| ! | CTTGCTTGGGCTAGGTAACA+TGG | + | chr5.2:79975500-79975519 | None:intergenic | 50.0% |
| ! | GAGATTACAGGGTCTTGTGG+AGG | - | chr5.2:79975906-79975925 | MS.gene81375:CDS | 50.0% |
| ! | GGCTTTGTGGAATTGGAACC+TGG | + | chr5.2:79973451-79973470 | None:intergenic | 50.0% |
| ! | GGTGACCCAGGTTCAGTTTT+GGG | + | chr5.2:79973427-79973446 | None:intergenic | 50.0% |
| ! | GTAGCATGCAGAAGGTGTAG+TGG | - | chr5.2:79975940-79975959 | MS.gene81375:intron | 50.0% |
| ! | GTATGGTGTGTTGGCAGCTT+GGG | - | chr5.2:79974438-79974457 | MS.gene81375:intron | 50.0% |
| ! | TGAGAGCCAAGAGCTTGCTT+GGG | + | chr5.2:79975513-79975532 | None:intergenic | 50.0% |
| ! | TGGTGACCCAGGTTCAGTTT+TGG | + | chr5.2:79973428-79973447 | None:intergenic | 50.0% |
| ! | TGTATGGTGTGTTGGCAGCT+TGG | - | chr5.2:79974437-79974456 | MS.gene81375:intron | 50.0% |
| !! | AGCTTGGGTGCTATGGCTTT+TGG | - | chr5.2:79974453-79974472 | MS.gene81375:intron | 50.0% |
| !! | TCCTAGTTCTGAAGAGAGCG+AGG | - | chr5.2:79974874-79974893 | MS.gene81375:intron | 50.0% |
| !! | TGCAGGTGAAGAGTGTTGGA+TGG | - | chr5.2:79975854-79975873 | MS.gene81375:CDS | 50.0% |
| !!! | GCGGCTGTTATTGCTGGTTT+TGG | - | chr5.2:79974489-79974508 | MS.gene81375:intron | 50.0% |
| !!! | TCTGCTGCTGGTGCTGTTTT+GGG | - | chr5.2:79974405-79974424 | MS.gene81375:intron | 50.0% |
| !!! | TTCTGCTGCTGGTGCTGTTT+TGG | - | chr5.2:79974404-79974423 | MS.gene81375:intron | 50.0% |
| !!! | TTTTGGGGCTGCTGTGTGTA+TGG | - | chr5.2:79974421-79974440 | MS.gene81375:intron | 50.0% |
| ACCTAGCCCAAGCAAGCTCT+TGG | - | chr5.2:79975504-79975523 | MS.gene81375:intron | 55.0% | |
| AGAAGTGGAGGTGGAAGTGG+AGG | + | chr5.2:79976763-79976782 | None:intergenic | 55.0% | |
| AGCCGGTGGAAGAGTGAAAC+TGG | - | chr5.2:79976524-79976543 | MS.gene81375:CDS | 55.0% | |
| AGTACTCAGCCACCGAGCAA+AGG | - | chr5.2:79975040-79975059 | MS.gene81375:intron | 55.0% | |
| AGTTTCACTCTTCCACCGGC+TGG | + | chr5.2:79976525-79976544 | None:intergenic | 55.0% | |
| CATCGTCGTCGTCGTCATCA+AGG | + | chr5.2:79976572-79976591 | None:intergenic | 55.0% | |
| CGGACCTGGACTCCCAATAT+TGG | + | chr5.2:79974753-79974772 | None:intergenic | 55.0% | |
| GGAACCACTGGATCAGCAGA+AGG | + | chr5.2:79974857-79974876 | None:intergenic | 55.0% | |
| GGAGGAAGTAGAAGTGGAGG+TGG | + | chr5.2:79976772-79976791 | None:intergenic | 55.0% | |
| GTACTCAGCCACCGAGCAAA+GGG | - | chr5.2:79975041-79975060 | MS.gene81375:intron | 55.0% | |
| GTCTACTGCTAAGCAGCCGA+TGG | + | chr5.2:79974367-79974386 | None:intergenic | 55.0% | |
| TAACAGAGTGGCTGTGCTGC+TGG | + | chr5.2:79974549-79974568 | None:intergenic | 55.0% | |
| TCCAACGTTGTTACCAGGGG+CGG | + | chr5.2:79974773-79974792 | None:intergenic | 55.0% | |
| TCCTTGATCCCTTTGCTCGG+TGG | + | chr5.2:79975052-79975071 | None:intergenic | 55.0% | |
| TGTTGGCAGCTTGGGTGCTA+TGG | - | chr5.2:79974446-79974465 | MS.gene81375:intron | 55.0% | |
| ! | TCTCTTTTTGGACCAGCCGG+TGG | - | chr5.2:79976510-79976529 | MS.gene81375:CDS | 55.0% |
| !!! | CTGCTGCTGGTGCTGTTTTG+GGG | - | chr5.2:79974406-79974425 | MS.gene81375:intron | 55.0% |
| ACTGAACCTGGGTCACCACC+AGG | - | chr5.2:79973430-79973449 | MS.gene81375:CDS | 60.0% | |
| CCAGCAATAACAGCCGCAGC+AGG | + | chr5.2:79974486-79974505 | None:intergenic | 60.0% | |
| CCTGCTGCGGCTGTTATTGC+TGG | - | chr5.2:79974483-79974502 | MS.gene81375:intron | 60.0% | |
| GACCTGAACAGGTCCTGGTG+TGG | - | chr5.2:79974250-79974269 | MS.gene81375:intron | 60.0% | |
| GCCAAGTTCATCAGCGGCAC+TGG | - | chr5.2:79976662-79976681 | MS.gene81375:CDS | 60.0% | |
| GCCACCGAGCAAAGGGATCA+AGG | - | chr5.2:79975048-79975067 | MS.gene81375:intron | 60.0% | |
| GCCCCTGGTAACAACGTTGG+AGG | - | chr5.2:79974772-79974791 | MS.gene81375:intron | 60.0% | |
| GGAGCCTTCTGCTGATCCAG+TGG | - | chr5.2:79974850-79974869 | MS.gene81375:intron | 60.0% | |
| TCCGCCCCTGGTAACAACGT+TGG | - | chr5.2:79974769-79974788 | MS.gene81375:intron | 60.0% | |
| TGCCACACCAGGACCTGTTC+AGG | + | chr5.2:79974255-79974274 | None:intergenic | 60.0% | |
| ! | CGAGGAAGAGCGTGTTCCAG+TGG | - | chr5.2:79974892-79974911 | MS.gene81375:intron | 60.0% |
| ! | GCCAAGAGCTTGCTTGGGCT+AGG | + | chr5.2:79975508-79975527 | None:intergenic | 60.0% |
| ! | GCCAGTGCCGCTGATGAACT+TGG | + | chr5.2:79976666-79976685 | None:intergenic | 60.0% |
| ! | TTGGAACCTGGTGGTGACCC+AGG | + | chr5.2:79973439-79973458 | None:intergenic | 60.0% |
| AACCAGGGGCGGACCTGAAC+AGG | - | chr5.2:79974239-79974258 | MS.gene81375:intron | 65.0% | |
| GGTGTGGCACTTGCCACACC+AGG | + | chr5.2:79974266-79974285 | None:intergenic | 65.0% | |
| GTTGTTACCAGGGGCGGACC+TGG | + | chr5.2:79974767-79974786 | None:intergenic | 65.0% | |
| GACCTGTTCAGGTCCGCCCC+TGG | + | chr5.2:79974244-79974263 | None:intergenic | 70.0% | |
| GGGCGGACCTGAACAGGTCC+TGG | - | chr5.2:79974245-79974264 | MS.gene81375:intron | 70.0% | |
| TGGGAGTCCAGGTCCGCCCC+TGG | - | chr5.2:79974757-79974776 | MS.gene81375:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 79973418 | 79976848 | 79973418 | ID=MS.gene81375 |
| chr5.2 | mRNA | 79973418 | 79976848 | 79973418 | ID=MS.gene81375.t1;Parent=MS.gene81375 |
| chr5.2 | exon | 79976041 | 79976848 | 79976041 | ID=MS.gene81375.t1.exon1;Parent=MS.gene81375.t1 |
| chr5.2 | CDS | 79976041 | 79976848 | 79976041 | ID=cds.MS.gene81375.t1;Parent=MS.gene81375.t1 |
| chr5.2 | exon | 79975792 | 79975953 | 79975792 | ID=MS.gene81375.t1.exon2;Parent=MS.gene81375.t1 |
| chr5.2 | CDS | 79975792 | 79975953 | 79975792 | ID=cds.MS.gene81375.t1;Parent=MS.gene81375.t1 |
| chr5.2 | exon | 79975175 | 79975444 | 79975175 | ID=MS.gene81375.t1.exon3;Parent=MS.gene81375.t1 |
| chr5.2 | CDS | 79975175 | 79975444 | 79975175 | ID=cds.MS.gene81375.t1;Parent=MS.gene81375.t1 |
| chr5.2 | exon | 79974339 | 79974407 | 79974339 | ID=MS.gene81375.t1.exon4;Parent=MS.gene81375.t1 |
| chr5.2 | CDS | 79974339 | 79974407 | 79974339 | ID=cds.MS.gene81375.t1;Parent=MS.gene81375.t1 |
| chr5.2 | exon | 79973418 | 79973740 | 79973418 | ID=MS.gene81375.t1.exon5;Parent=MS.gene81375.t1 |
| chr5.2 | CDS | 79973418 | 79973740 | 79973418 | ID=cds.MS.gene81375.t1;Parent=MS.gene81375.t1 |
| Gene Sequence |
| Protein sequence |
